BIOLOGICAL MOLECULES OF LIFE CARBOHYDRATES, LIPIDS, PROTEINS, AND NUCLEIC ACIDS The Academic Support Center @ Daytona State College (Science 115, Page 1 of 29) Carbon Carbon is a central element to life because most biological molecules are built on a carbon framework. The complexity of living things is facilitated by carbon’s linkage capacity. Carbon has great bonding capacity due to its tetrahedral structure. Carbon’s outer shell has only four of the eight electrons necessary for maximum stability in most elements. Carbon atoms are thus able to form stable, covalent bonds with a wide variety of atoms, including other carbon atoms. The Academic Support Center @ Daytona State College (Science 115, Page 2 of 29) Organic vs Inorganic Compounds Compounds which contain carbon – carbon bonds are called organic molecules. • Contain carbon and hydrogen. • Contains single, double, or triple covalent bonds. • Examples – methane, ethane, sugar, lipids Compounds which do not contain carbon – carbon bonds are called inorganic. • Examples – water, oxygen, ammonia, salt The Academic Support Center @ Daytona State College (Science 115, Page 3 of 29) Organic Compounds • always contain carbon and hydrogen, and sometimes oxygen, sulfur, nitrogen, phosphorus, or a halogen • occur in nature and are also found in fuel, shampoos, cosmetics, perfumes, and foods • are the foundation for understanding biochemistry • have low melting and boiling points • are not soluble in water and are less dense than water • undergo combustion, burning vigorously in air Formulas for organic compounds are written with carbon first, followed by hydrogen and then other elements. The Academic Support Center @ Daytona State College (Science 115, Page 4 of 29) Organic vs Inorganic Compounds The Academic Support Center @ Daytona State College (Science 115, Page 5 of 29) Hydrocarbons Hydrocarbons are organic compounds that contain only carbon and hydrogen. Saturated hydrocarbons contain only single carbon-carbon bonds. The Academic Support Center @ Daytona State College (Science 115, Page 6 of 29) Molecules of Life The Academic Support Center @ Daytona State College (Science 115, Page 7 of 29) Monomers and Polymers Biological molecules are made by monomers bonding to form polymers Monomers • Molecules that are building blocks for larger molecules • Simple sugars, fatty acids, amino acids, nucleotides Polymers • Molecules that consist of multiple monomers • Carbohydrates, lipids, proteins, nucleic acids • Polymers are made by dehydration synthesis (removal of water) • Polymers are broken apart by hydrolysis (addition of water). The Academic Support Center @ Daytona State College (Science 115, Page 8 of 29) Monomers and Polymers Dehydration of Synthesis Hydrolysis The Academic Support Center @ Daytona State College (Science 115, Page 9 of 29) Carbohydrates • Carbohydrates are formed from the building blocks or monomers of simple sugars, such as glucose. • Some simple sugars have the same chemical formula but are arranged differently, such as glucose and fructose. These are called isomers. • These monomers can be linked to form larger polymers, which are known as disaccharides polysaccharides (complex carbohydrates). The Academic Support Center @ Daytona State College (Science 115, Page 10 of 29) Carbohydrates - Disaccharides Disaccharides are two simple sugars bonded together. Some examples include: Sucrose = glucose + fructose • Lactose = glucose + galactose • Table sugar Milk sugar Maltose = glucose + glucose • Found in germinating grains, malt products The Academic Support Center @ Daytona State College (Science 115, Page 11 of 29) Carbohydrates - Polysaccharides Polysaccharides are made up of many monomers joined together. Four polysaccharides are critical in the living world: Starch • Glycogen • nutrient storage form of carbohydrates in animals Cellulose • nutrient storage form of carbohydrates in plants rigid, structural carbohydrate found in the cell walls of many organisms Chitin • tough carbohydrate that forms external skeleton of arthropods. The Academic Support Center @ Daytona State College (Science 115, Page 12 of 29) Carbohydrates - Polysaccharides The Academic Support Center @ Daytona State College (Science 115, Page 13 of 29) Lipids The defining characteristic of all lipids is that they do not readily dissolve in water. Lipids do not possess the monomers-to-polymers structure seen in other biological molecules; no one structural element is common to all lipids. Lipids include • Triglycerides • Steroids • Phospholipids • Waxes Lipids are used for • Storing energy • Insulating and cushioning • Hormones - steroids • Waterproofing • Cell membranes The Academic Support Center @ Daytona State College (Science 115, Page 14 of 29) Lipids - triglycerides Among the most important lipids are the triglycerides, composed of a glyceride and three fatty acids. Most of the fats that human beings consume are triglycerides. Saturated fats are triglyceride molecules that have only single bonds. Unsaturated fats are triglyceride molecules that have at least one double bond. The two types of unsaturated fats are: • Cis fat – naturally occurring configuration of double bond • Trans fat – artificially created configuration of double Hydrogenated fats are artificially created saturated fats made from cis fats. The Academic Support Center @ Daytona State College (Science 115, Page 15 of 29) Lipids – steroids Another important variety of lipids is the steroids, all of which have a core of four carbon rings with various functional groups attached. Examples include cholesterol and such hormones as testosterone and estrogen. The Academic Support Center @ Daytona State College (Science 115, Page 16 of 29) Lipids – phospholipids A third class of lipids is the phospholipids, each of which is composed of two fatty acids, glycerol, and a phosphate group. The phosphate end is polar and attracts water. The fatty acid end is nonpolar and repels water. The material forming the outer membrane of cells is largely composed of phospholipids. The Academic Support Center @ Daytona State College (Science 115, Page 17 of 29) Lipids – waxes A fourth class of lipids is the waxes, each of which is composed of a single fatty acid linked to a long-chain alcohol. Waxes have an important “sealing” function in the living world. Almost all plant surfaces exposed to air, for example, have a protective covering made largely of wax. The Academic Support Center @ Daytona State College (Science 115, Page 18 of 29) Proteins Proteins are an extremely diverse group of biological molecules composed of the monomers called amino acids. Sequences of amino acids are strung together to produce polypeptide chains, which then fold up into working proteins. Important groups of proteins include enzymes, which hasten chemical reactions, and structural proteins, which make up such structures as hair. The Academic Support Center @ Daytona State College (Science 115, Page 19 of 29) Types of Proteins The Academic Support Center @ Daytona State College (Science 115, Page 20 of 29) Proteins – Amino acids Amino acids: • are the building blocks of proteins. • contain a carboxylic acid group and an amino group on the alpha () carbon. • contain a side chain of atoms (R) • are ionized in solution. The Academic Support Center @ Daytona State College (Science 115, Page 21 of 29) Proteins – Amino acids There are 20 common amino acids found in human proteins. The 20 amino acids are classified into four categories based on their side chains (R- groups) The Academic Support Center @ Daytona State College (Science 115, Page 22 of 29) Proteins – The 20 Amino acids The Academic Support Center @ Daytona State College (Science 115, Page 23 of 29) Proteins – The Beginning of a Protein The Academic Support Center @ Daytona State College (Science 115, Page 24 of 29) Proteins – Hierarchy of Protein Structure The Academic Support Center @ Daytona State College (Science 115, Page 25 of 29) Lipoproteins & Glycoproteins Lipoproteins Lipoproteins are biological molecules that are combinations of lipids and proteins. High-density and low-density lipoproteins (HDLs and LDLs, respectively), which transport cholesterol in human beings, are important determinants of human heart disease. Glycoproteins Glycoproteins are combinations of carbohydrates and proteins. The signal-receiving receptors found on cell surfaces often are glycoproteins. The Academic Support Center @ Daytona State College (Science 115, Page 26 of 29) Nucleic Acids Nucleic acids are polymers composed of nucleotides. The nucleic acids are composed of nucleotides that contain a sugar, a phosphate group, and one of five nitrogen-containing bases. There are two types of nucleic acids DNA, deoxyribonucleic acid • DNA is the repository of genetic information • The sequences of bases in DNA encodes the information necessary for production of proteins in living things. RNA, ribonucleic acid • RNA transports the information in encoded in DNA to the sites of protein synthesis. The Academic Support Center @ Daytona State College (Science 115, Page 27 of 29) Nucleic Acids - Nucleotides Nucleotides consist of: A pentose sugar • Deoxyribose for DNA • Ribose for RNA A phosphate group A nitrogenous base either a pyrimidine or a purine The pyrimidines include: • Cytosine (C) and Thymine (T) for DNA • Cytosine (C) and Uracil (U) for RNA The purines include: • Adenine (A) and Guanine (G) When Nucleic Acids hydrogen bond to each other they always pair up C to G, and A to T in DNA. For RNA , they pair up C to G and A to U. The Academic Support Center @ Daytona State College (Science 115, Page 28 of 29) Questions Prepared and Compiled from various sources by D. Leonard (Learning Specialist) The Academic Support Center @ Daytona State College http://www.daytonastate.edu/asc/ascsciencehandouts.html The Academic Support Center @ Daytona State College (Science 115, Page 29 of 29)