Living Environment Characteristics of Life Life Functions Vocabulary Cells Cell Respiration Energy Excretion Genetic code Growth Homeostasis Inorganic Metabolism Organelles Organic Organs Organ Systems Response Reproduction Stimulus Synthesis Tissues Transport Characteristics of Life • Living things share certain characteristics that distinguish them from nonliving things. • All living things are made up of one or more cells – the basic unit of structure and function that makes up all organisms • Living things use energy – food energy - to maintain life and to grow and develop. • Homeostasis – maintenance of internal environment when the external environment changes constantly. • • • Metabolism – all the chemical reactions that occur in an organism. Organelles – a structure within the cell that carries out a specific function. Organic – term used to describe molecules that contain both hydrogen and carbon. • • • • • • • • Organs – a body structure made of different kinds of tissues combined to perform a specific function. Organ Systems – several organs that work together to perform a major function in the body. Response – single, specific reaction to a stimulus – a signal to which an organism responds. Reproduction – the process by which organisms produce new organisms of the same type - is the process that passes hereditary information to new organisms of the same type. Living things are based on a universal genetic code -– the biochemical basis of hereditary in all living organisms. Tissues – a group of specialized cells that perform a specific function. Taken as a group living things change over time In bodies of animals, it is organized from simple to more complex: organelles, cells, tissues, organs and organ systems Cell Tissue Organ Organ System * Viruses are not living because they are not cells. They do not independently carry out life processes; instead they invade cells of living organisms. Life Processes • Obtaining nutrients from the environment and breaking them down for transport - needed substances and wastes carried to and from cells in the body • Transporting materials throughout the organism • Breaking nutrients into smaller units to release the chemical energy stored in them through the process known as cell respiration - the process by which the chemical bond energy stored in nutrients is released for use in cells. • • • Combining simple substances into complex substances during the process known as synthesis Increasing the size or number of cells through the process of growth Removing waste products from the organism through the process known as excretion Responding to internal and external stimuli • Reproducing more of their own species • • Growth Respiration/Transport Multiple Choice Review Questions 1. One characteristic of all living organisms is that they (1) make food (2) live on land (3) maintain homeostasis (4) move from place to place 2. Viruses are exceptions to the cell theory, but they have some characteristics of living things. What is one of these characteristics? (1) They are made up of many specialized (2) They contain genetic material (3) They reproduce by mitosis (4) They contain chlorophyll 3. Which activity is illustrated in the diagram of an ameba shown below? (1) (2) (3) (4) egestion synthesis respiration ingestion 4. A paramecium absorbs materials from its environment and circulates these materials throughout its' cytoplasm. Which life function is described by these activities? (1) (2) (3) (4) synthesis reproduction respiration transport 5. Locomotive structures found in some protists include (1) (2) (3) (4) muscles flagella tentacles contractile vacuoles 6. In humans, gas exchange and gas transport occur as a result of the functioning of a system of (1) phloem tubes (2) lungs and blood vessels (3) ganglia (4) setae 7. A biologist would most likely study all of the chemical activities of an organism to obtain information about the organism’s (1) number of mutations (2) reproductive cycle (3) development (4) metabolism 8. Cells are to tissues as organs are to (1) organ systems (2) cells (3) genes (4) organelles 9. The ability of an organism to maintain internal stability is known as (1) metabolism (2) homeostasis (3) circulation (4) excretion 10. Organisms remove metabolic cellular wastes by the process of (1) E\xcretion (2) absorption (3) coordination (4) digestion Constructed Response Questions 11. State two ways in which a single-celled organism, such as an amoeba, and a human body cell are alike. ________________________________________________________________________ __________________________________________________ ________________________________________________________________________ __________________________________________________ 12. Identify a specific structure in a single-celled organism. State how that structure is involved in the survival of the organism. ________________________________________________________________________ __________________________________________________ ________________________________________________________________________ __________________________________________________ Scientific Method Vocabulary Analysis Bias Conclusion Control Controlled Experiment Data Dependent Variable Evidence Hypothesis Independent Variable Inference Model Observation Opinion Peer Review Research Plan Scientific Literacy Scientific Law Scientific Theory Scientific Method • Research Plan – the initial stage of an experiment that involves finding background information, developing a hypothesis, and devising an experimental method for testing the hypothesis • Hypothesis - an attempt to explain what has been observed in a way that can be tested. • • • • • • • • • • • • • • • • • Experiments a series of trials to test a hypothesis to either support it or fail to support it. Dependent Variable – depends on what you do in the experiment (what you will measure) Independent Variable – the variable that you will manipulate (what are you going to change/do in the experiment) Control – established reference point used as a standard of comparison. Controlled experiment – the possible variables have been carefully considered and regulated so the results are due to the independent variable you are testing. Only testing one variable with two identical set ups. Observation – any information that is collected with any of the senses Data - information that can be presented in a chart, graph, and/or pictures Data is used to find out whether certain factors changed of remained the same in an experiment Opinion – ideas people have that may or may not be based in fact Analyzing – examine critically - data to form conclusions. Scientific theory – a concept, which has been tested and confirmed in many different ways, that explains a wide variety of observations Scientific Law – a statement that describes some aspect of a phenomenon that is always true. Conclusion – the decision made about the outcome of an experiment; usually based on how well the actual result matches the predicted result Evidence – support for the idea that something is true Inference – a conclusion or deduction based on observations Peer Review – the process by which scientists carefully examine the work of other scientists to look for possible flaws in their experimental design or their interpretation of results Scientific Literacy – a basic knowledge of the natural world combined with an understanding of the diverse ways that scientists gain knowledge *Example Experiment 1. Question: How many drops of water can fit on a coin? Research and hypothesis: Student try to guess how many drops of water will fit on a coin. Students should find out about surface tension and base their hypothesis on that concept. Experiment: Students work in pairs. You need coins and water droppers. Students drop slowly drop water onto the coin as their partner counts how many drops fit on the coin without it overflowing. Do this activity three times and then average your results. This is a good experiment for discussing constants and variables. Independent Variable: How you drop water Dependent Variable: Amount of water than fits on the coin Constants: The height from which they drop the water The student dropping the water The pressure on the dropper The side of the coin Analysis: Students can graph their results in a pictograph or bar graph. Conclusion: Students can discuss why their hypothesis might have been wrong such as the variables were hard to control - it was hard to drop each drop with same amount of pressure. 2. Question: Does the width (or length) of a rubber band affect how far it will fly? Research and hypothesis: Student try to guess how far a rubber band will go when shot across the room. Students should find out about tension and kinetic energy. Experiment: You need rubber bands that are the same width and different lengths, or vice versa. Determine a "shooting method" and starting line. Students shoot their rubber bands and measure the distance they travel. This works well outside or in a gym. Do this activity three times and then have them average their results. This is a good experiment for discussing constants and variables. Independent Variable: The width (or length) of the rubber band Dependent Variable: The distance the rubber band flies Constants: How you shoot the rubber band The width or length (the opposite to the variable) How far you pull the rubber band back Analysis: Students can graph their results in a pictograph or bar graph. Conclusion: Then they can discuss why their hypothesis might have been wrong such as the variables were hard to control - it was hard to shoot each rubber band the same way or the rubber bands were different lengths and widths. Multiple Choice Review Questions 1. A biologist in a laboratory reports a new discovery based on experimental results. If the experimental results are valid, biologists in other laboratories should be able to (1) repeat the experiment with a different variable and obtain the same results (2) perform the same experiment and obtain different results (3) repeat the same experiment and obtain the same results (4) perform the same experiment under different experimental conditions and obtain the same results 2. Which statement describes the best procedure to determine if a vaccine for a disease in a certain bird species is effective? (1) Vaccinate 100 birds and expose all 100 to the disease. (2) Vaccinate 100 birds and expose only 50 of them to the disease. (3) Vaccinate 50 birds, do not vaccinate 50 other birds, and expose all 100 to the disease. (4) Vaccinate 50 birds, do not vaccinate 50 other birds, and expose only the vaccinated birds to the disease. 2 Diagrams, tables, and graphs are used by scientists mainly to (1) design a research plan for an experiment (2) test a hypothesis (3) organize data (4) predict the independent variable 3. A biologist observed a plant cell in a drop of water as shown in diagram A. The biologist added a 10% salt solution to the slide and observed the cell as shown in diagram B. The change in appearance of the cell resulted from (1) more salt moving out of the cell than into the cell (2) more salt moving into the cell than out of the cell (3) more water moving into the cell than out of the cell (4) more water moving out of the cell than into the cell 4. A drug company tested a new medication before putting it on the commercial market. Pills without medication were given to 500 test subjects in group B. In this experiment, the individuals in group A served as the 1. host group 2. dependent variable 3. control 4. hypothesis 5. A scientist tested a hypothesis that white-tailed deer would prefer apples over corn as a primary food source. The findings of the test, in which the scientist claimed that the deer preferred apples, were published. Which research technique, if used by the scientist, might result in this claim being questioned? (1) The scientist observed four deer in different locations at various times of the day (2) The scientist observed a total of 500 deer in 20 different locations at various times of the day. (3) The scientist observed 200 deer in various natural settings, but none in captivity. (4) The scientist observed 300 deer in various locations in captivity, but none in natural settings. 6. Tomato plants in a garden are not growing well. The gardener hypothesizes that the soil is too acidic. To test this hypothesis accurately, the gardener could (1) plant seeds of a different kind of plant (2) move the tomato plants to an area with less sunlight (3) change the pH of the soil (4) reduce the amount of water available to the plant 7. The current knowledge concerning cells is the result of the investigations and observations of many scientists. The work of these scientists forms a well-accepted body of knowledge about cells. This body of knowledge is an example of a (1) hypothesis (2) controlled experiment (3) theory (4) research plan 8. A student conducted an original, well-designed experiment, carefully following proper scientific procedure. In order for the conclusions to become generally accepted, the experiment must (1) contains several experiment variables (2) support the original hypothesis (3) be repeated to verify the reliability of the data (4) be conducted by a scientist 9. A student tossed a coin five times and observed results of four tails and one head. He conducted that when a coin is tossed, there is an 80% chance of getting a tail and a 20% chance of getting a head. The conclusionwould be more valid if (1) only two tosses of the coin had been used (2) the weight of the coin has been taken into consideration (3) a greater number of tosses had been used (4) the surface of the coin landed on had been taken into consideration 10. A scientific study showed that the depth at which some microscopic plants were found in a lake varied from day to day. On clear days, the plants were found as far as 6 meters below the surface of the water but were only 1 meter below the surface on cloudy days. Which hypothesis would these observations support? (1) Light intensity affects the growth of microscopic plants. (2) Wind currents affect the growth of microscopic plants. (3) Nitrogen concentrations affects the growth of microscopic plants. (4) Precipitation affects the growth of microscopic plants. Constructed Response Questions 1. In an experiment to test the effect of light on plant growth, a student used two marigold plants of the same age. The plants were grown in separate pots. One pot was exposed to sunlight, the other to artificial light. All other conditions were kept the same. The height of each plant was measured at the start and at the end of the experiment. The student’s data are shown in the table below. Plant Grown In Sunlight Artificial Light Data Table Increase in Plant Height (cm) 9 8 The student concluded that all plants grow more rapidly in sunlight than in artificial light. Discuss whether this conclusion is valid. Your answer must include at least: •the significance of the difference in the results shown in the data table •the significance of the number of individual plants used in the experiment •the significance of the number of species of plants used in the experiment ________________________________________________________________________ __________________________________________________ ________________________________________________________________________ __________________________________________________ ________________________________________________________________________ __________________________________________________ ________________________________________________________________________ __________________________________________________ 2. State two safety procedures that should be followed when conducting an experiment that involves heating protein in a test tube containing water, an acid, and a digestive enzyme. _____________________________________________________________ _____________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ____________________________ 3. An experiment was carried out to determine how competition for living space affects plant height. Different numbers of plants were grown in three pots, A, B, and C. All three pots were the same size. The data collected are shown in the table below. Day 1 Average Daily Plant Height (mm) Day 2 Day 3 Day 4 Day 5 Day 6 Day 7 Pot A – 5 2 4 6 8 10 14 16 Pot B – 10 2 4 6 8 10 12 12 Pot C – 20 2 2 2 6 6 8 8 Analyze the experiment that produced the data shown in the table. In your answer be sure to: • state a hypothesis for the experiment • identify one factor, other than pot size, that should have been kept the same each experimental group • identify the dependent variable • state whether the data supports or fails to support your hypothesis and justify your answer _____________________________________________________________ in _____________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ____________________________ _____________________________________________________________ _____________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ____________________________ 4. Base your answers to questions 2 and 3 on the information in the newspaper article below and on your knowledge of biology. Patients to test tumor fighter Boston-Endostatin, the highly publicized experimental cancer drug that wiped out tumors in mice and raised the hopes of cancer patients, will be tested on patients this year. “I think it’s exciting, but . . . you always have the risk that something will fail in testing,” said Dr. Judah Folkman, the, Harvard University researcher whose assistant, Michael O’Reilly, discovered endostatin. Endostatin and a sister protein, angiostatin, destroy the tumors’ ability to sprout new blood vessels. This makes cancer fall dormant in lab animals, but no one knows if that will happen in humans. (The Associated Press) 2 Explain why it is necessary to test these experimental drugs on human volunteers as well as on test animals. _____________________________________________________________ _____________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ____________________________ 3 State one reason that mice are often used by scientists for testing experimental drugs that may be used by humans. _____________________________________________________________ _____________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ____________________________ Basic Chemistry Important vocabulary: Chemistry Atom Element Molecule Compound Carbon Oxygen Hydrogen Nitrogen pH Ion Acid Base Basic Chemistry Living things and non-living things (from a one celled amoeba, to a giant redwood tree out in Oregon, to the desk you are leaning on) are made up of the same building blocks. Chemistry tells us what the millions of different substances are made up of. Chemistry: The study of matter Atom: the basic building block of matter: atoms cannot be divided any further by ordinary means. Substances made up of only one kind of atom are called ELEMENTS. Ex: carbon, oxygen, nitrogen and hydrogen The periodic table contains the elements found on the earth. Under normal circumstances: atoms have equal number of electrons, protons and neutrons. There are times when atoms do not have an equal number of protons, neutrons and electrons: Ion: an atom with a negative or a positive charge ?What is an ion? Sometimes it is possible for an atom to give away or receive electrons; this causes it to have a charge Ex- H+ and OH- Basic Chemical Bonding: Most substances in this world are COMPOUNDS-which are two or more kinds of atoms combined in definite proportions. *Ex-Water (H20) and table salt (NaCl) Chemical bond: the force of attraction between two or more atoms that hold them together Types of bonds: 1- Ionic bonding: when 1 or more electrons are transferred from one atom to the other. This is what creates IONS. Ex- NaCl 2. Covalent bonding: When atoms share electrons to form molecules Ex: water (H20) Molecule: two or more atoms are combined and act as a single particle pH- acids and bases Acid: any compound that produces H+ (a hydrogen ion) in a solution (water). HCl H+ + ClAcid rain: fossil fuels are burned and release sulfur and nitrogen into the air. These mix with the rainwater and produce acids. Base: any compound that produces a Hydroxide ion (OH-) when dissolved in a solution (water). When something is a base it is also known as ALKALINE. NaOH Na+ + OHWhen solutions of an equal amount of an acid and a base are mixed what will result? H+ + OH- H2O The process of reacting an acid with a base to produce a NEUTRAL solution is called: NEUTRALIZATION. The pH scale: Scientists devised a measurement system called the pH scale to indicate the amount of H+ ions in a solution. **the pH scale ranges from 0 to 14 with stronger acids starting a 0 and stronger bases beginning at 14. ***** Alkaline= Basic The human body and pH: The pH of the fluid in most body cells must be kept within 6.5 to 7.5 or death will result! ? What is one exception to this rule? (Stomach acid-about 2 on the pH scale) What is a stomach ulcer? When the environment of the stomach is too ACIDIC! The acid eats away at the lining of the stomach and causes painful sores!!!! Organic Chemistry Important vocabulary: Inorganic Organic Dehydration synthesis Hydrolysis Nucleic acid Carbohydrate Lipid Protein Enzyme Monosaccharide Polysaccharide Amino acid Glycerol Fatty acid Saturated fats Unsaturated fats Glucose Organic vs. Inorganic compounds What makes something organic? *always contains carbon *usually contains hydrogen *may contain oxygen and nitrogen Organic compound- a compound that contains the element carbon *most organic compounds occur naturally only in living organisms or in their byproducts. Ex- sugar (from a plant) Oil (from a plant) What makes something inorganic? *a compound that doesn’t contain carbon An important inorganic compound… H2O!!!! Why is water so important to living organisms? *all living organisms need water to survive *65% of your body is water Structure and Type of Organic Compounds: ***Organic compounds are very complex and large Remember: all organic compounds contain carbon ****the possible size and variety of these compounds is unlimited!!!! 4 Major Types of Organic Compounds 1. 2. 3. 4. Carbohydrates Lipids. Proteins Nucleic Acids Carbohydrates: Carbohydrate: an organic compound made up of carbon, hydrogen and oxygen C: H: O • • 2: 1 ratio of hydrogen to oxygen in carbohydrates ex: Glucose C6H12O6 Monosaccharide: the simplest carbohydrate “simple sugar” *the building blocks of carbohydrates Ex- glucose, sucrose, galactose Hint: You can recognize most sugars because they end USUALLY end in “-ose”. Lactose, glucose, fructose, sucrose Exception: starch Why are sugars so important? *they contain large amounts of energy *nearly all living organisms use glucose for energy Dehydration Synthesis: Dehydration synthesis is a process that bonds molecules together by removing H20. Ex- the formation of a disaccharide. Disaccharide- the molecule formed by joining two simple sugars (monosaccharides) by dehydration synthesis. Ex- sucrose Polysaccharide: many simple sugars bonded together through dehydration synthesis to create a chain of repeating subunits. Ex- starch (plants) Hydrolysis: the reversal of dehydration synthesis -disaccharide/polysaccharide is broken down into simple sugars by adding H2O Lipids Lipid: an organic compound made up of Carbon, Oxygen and Hydrogen What are lipids? Fats, Oils, Waxes Function: lipids are part of a cells structure and serve as a reserve energy supply, insulation and also act as a protective coating. ****Lipids are insoluble in H2O Synthesis of a Fat: *a molecule of fat is formed by the dehydration synthesis of 3 fatty acid molecules and 1 glycerol molecule. Saturated and Unsaturated fats: Saturated Fat: fats that are formed from fatty acids that have single to single carbon bonds diagram on board: ex- solid at room Temperature butter *Diets high in saturated fats tend to increase cholesterol levels (increase in plaque formed in blood vessels) *This increases the risk for strokes and heart attacks. Unsaturated fat: one pair of carbon atoms is joined by a double bond/triple bond Ex- liquid at room temperature Oils Nucleic Acids Nucleic acids: compounds that contain *carbon *hydrogen *oxygen *phosphorous *nitrogen 2 types of N.A: DNA: (deoxyribonucleic acid) found in the nucleus of the cell. DNA is the hereditary information that is passed from parent to offspring. RNA- (ribonucleic acid) also found in the nucleus of the cell. RNA is responsible for protein synthesis (making proteins) ***DNA and RNA work together to control the development and activities of ALL cells in an organism!!!! Proteins Proteins: very large complex compounds that contain Carbon, Hydrogen, Oxygen and Nitrogen. Some contain Sulfur and Phosphorus as well. Where are proteins found? *Proteins are found throughout living organisms. Proteins make up muscle, bones, hormones (insulin), antibodies (protect us against disease), and enzymes (allow chemical reactions to take place) *there are millions of different types of proteins *proteins are extremely large and complex What are proteins made of? Amino Acids- the building blocks of proteins. Peptide bond- the bond between two amino acids Enzymes - protein substances that are necessary for most of the chemical reactions that occur in living cells • • • • • for each step of a reaction that occurs in a living organism there is a particular enzyme at work Enzymes enter into a chemical reaction only temporarily Enzymes are NOT changed by the reaction Enzymes are used again and again for the same purpose. All enzymes are made up by the cells of the living organism Catalyst- a substance that brings about a reaction without being changed itself *enzymes are organic catalysts Substrate- the substance an enzyme acts upon HINT: the names of enzymes usually end in –ASE. Ex- the enzyme that breaks maltose into two glucose molecules is maltase Ex- the enzyme that breaks down fat is lipase. How enzymes work: “lock and key model” Factors that affect enzyme action: *each enzyme must have a specific shape to work correctly and anything that alters that shape will affect the enzyme’s ability to function properly. *high temperatures and pH changes can cause enzyme shape to change *enzymes work best at certain temperatures (laundry detergent) *enzymes work best at certain pH values. (pepsin in the stomach) Graphs showing factors that affect enzyme action Compare and Contrast Chart Organic Compounds Characteristic Elements present/ Building Blocks Function in humans Food sources (For nucleic acids write where it is found in the human body) Molecular/ Structural Formula of the building block Carbohydrates Lipids Proteins Nucleic Acids Regents review questions: 1. Living things are made mostly of these four main elements: A. hydrogen, oxygen, nitrogen and protein B. water, protein, carbohydrate and fat C. carbon, hydrogen, oxygen, and nitrogen D. glucose, salt, mineral and base 2. What is the principal inorganic solvent in cells? A. salt B. water C. alcohol D. carbon dioxide 3. Fats that are stored in human tissue contain molecules of: A. glycerol and fatty acids B. amino acids C. monosaccharides and disaccharides D. nucleotides 4. One of the carbon compounds found in a cell has twice as many hydrogen atoms as oxygen atoms. This compound most likely belongs to the group of substances known as: A. nucleic acids B. lipids C. proteins D. carbohydrates 5. Which formula represents an organic compound? A. NH3 B. H20 NaCl C. C12H6O11 6. Starch is classified as a: disaccharide polypeptide nucleotide polysaccharide 7. Which organic compound is correctly matched with the subunit that composes it? maltose-amino acid Starch-glucose protein-fatty acid lipid-sucrose 8. Only small amounts of enzymes are required for reactions within cells because enzymes are: Fragile reused small molecules constantly synthesized 9. Which cell organelle controls the synthesis of enzymes? cell membrane nucleus Cell Wall Ribosomes 10. In order to survive all living things must carry out: autotrophic nutrition heterotrophic nutrition enzyme-controlled reactions the process of reproduction 11. Which group of organic compounds includes the enzymes? carbohydrates lipids proteins starches 12. The enzyme pepsin will act on protein but not on starch. This action illustrates that salivary amylase: contains protein is chemically specific is not reusable lacks starch 13. A particular human intestinal enzyme is most active at a pH of 8.0 and a temperature of 37 degrees Celsius. The activity of this enzyme would most likely decrease with an increase in the: amount of light shining on the reaction amount of enzyme amount of substance being acted on temperature to over 50 degrees Celsius 14. Enzymes influence chemical reactions in living systems by: becoming part of the product after the reactions occur combining with atmospheric gases to form waste products affecting the rate at which reactions occur absorbing water during synthesis and digestion 15. Which of the following is characteristic of an enzyme? it is an organic catalyst it is destroyed after each chemical reaction It provides energy for any chemical reaction It regulates the rate of a specific chemical reaction both A and D 16. Which of the following variables has the least direct effect on the rate of an enzyme-regulated reaction? temperature pH carbon dioxide concentration enzyme concentration Constructed response questions: 19. There are four major types of organic molecules that are important in living things; these are carbohydrates, lipids, proteins and nucleic acids. Select any tow and, for each on chosen, describe the structure of the molecule and state two ways that the molecule is useful to living organisms. _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ 20. Fresh pineapple contains an enzyme that digests proteins. Adding fresh pineapple to gelatin (a protein) prevents it from setting or jelling. Adding cooked or canned pineapple does not have this effect and the gelatin can set normally. Explain why these differences occur. __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ ____________________________________________________________ 21. When an apple is cut open, the inside soon turns brown. This is because enzymes that are released from the cut cells react with certain molecules in the apple. Rubbing lemon juice (which contains citric acid) on the cut apple prevents it form browning. Explain why this is so. _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ The Cell Important Vocabulary: Active Transport Cell Prokaryotic Concentration Receptor Diffusion Eukaryotic Organelle Osmosis Passive Transport Permeable 1. The cell is the basic unit of life. 2. The Cell Theory – a. All organisms are made of one or more cells b. All cells carry on life activities c. New cells arise only from other living cells. 3. Two cell types: a. Prokaryotic – No nucleus Ex.) Bacteria b. Eukaryotic – Have a nucleus Ex.) Human cells 4. Cell Structure – Organelles – parts of cells a. b. c. d. e. f. g. h. i. j. k. l. m. n. Cell wall – Only in plant cells, protects cell (made of cellulose) Cell membrane – allows things in/out of cell (made of lipids) Nucleus – Control center of cell (contains DNA) Cytoplasm – gel-like substance, chem. reactions take place Endoplasmic Reticulum – tubes that transport materials Ribosomes – makes proteins Golgi Bodies – flat sacs that process and package chemicals Lysosomes – digest and recycle substances Mitochondria – Respiration – produces energy for the cell Microtubules – give cell shape and help cell and organelles move Centrioles – Only in animal cells, help cell divide Cilia and flagella – hair like, help cell move Vacuoles – store food and water Chloroplast – Only in plant cells, Photosynthesis – use light to make sugar Cell Transport - How things get into and out of cells Cells need oxygen, water, sugar, and minerals to survive. They must release CO2 and other wastes. All of these things must pass through the cell membrane. Selectively Permeable Membrane – Only certain substance can pass through membrane Diffusion – The movement of molecules from an area of high concentration (more crowded) to low concentration. High Conc. (Crowded) ---> Low Conc. 1 Passive Transport – the movement of molecules without the use of energy Ex.) Diffusion, Osmosis and Facilitated Diffusion Osmosis – the diffusion of water into or out of a cell. Cell B shrinks when water leaves. Plant Cell in Fresh (Left) and Saltwater 1 Active Transport – The movement of molecules from an area of low concentration to high concentration. The cell uses energy for this kind of transport. Ex.) Phagocytosis – when a cell engulfs a large particle or another organism. White Blood Cell Engulfing Bacteria 1 Recognizing signals Certain protein molecules in the cell membrane can receive chemical signals from other cells. These molecules are called receptor molecules. Chemicals produced by endocrine glands (hormones) and by nerve cells (neurotransmitters) act as chemical signals between cells. They work by bonding to a receptor whose (sp?) shape fits the specific signal molecule. Review Questions 1. Which structure is the boundary between a living cell and its environment? a) cell membrane b) cytoplasm c) vacuole d) ribosome 2. The cell nucleus functions a) in obtaining energy for the cell b) in the storage of digestive enzymes c) as the center of control for cell metabolism and reproduction d) in the transport of materials throughout the cell 3. The genetic material of an animal cell is found in the.. a) nucleus b) cytoplasm c) ribosomes d) vacuole 4. Current evidence indicates that ribosomes are most closely associated with a) contraction of the cytoplasm b) production of DNA c) synthesis of protein d) regulation of mitosis 5. Mitochondria are organelles in which a) digestive enzymes are stored b) secretory products are packaged and stored c) the energy needed by the cell is released from nutrients d) protein manufacture occurs 6. Which cell organelles are most closely associated with energy changes in a plant? a) mitochondria and chromosomes b) chloroplasts and mitochondria c) chromosomes and nucleus d) chloroplasts and nucleus 7. Which is the most accurate statement concerning protein synthesis in cells? a) proteins are synthesized at the mitochondria in all living cells b) proteins are synthesized at the ribosomes in all living cells c) proteins are synthesized at the ribosomes in plant cells only d) proteins are synthesized by the nuclei in animal cells only 8. Which of the following would be least affected by defective receptor proteins on a cell membrane? a) homeostasis b) muscle activity c) nerve signals d)diffusion 9. In both plant and animal cells, the cell membrane.. a) produces enzymes b) controls reproduction c) is composed of sugars d) regulates diffusion 10. Since the relative concentration of water in the pond in which a paramecium ( a single celled organism ) lives is greater than the concentration of water in its cytoplasm, water molecules constantly move from the pond into the paramecium. The best long-term solution to the problem or maintaining a stable internal environment is for the paramecium to.. a) change the water into carbon dioxide and excrete it b) store water molecules c) incorporate water molecules into its structure d) actively transport water molecules out of its cell 11. A biologist diluted a blood sample with distilled water. While observing the sample with a microscope, she noted that the red blood cells, had burst. This bursting is most likely the result of which process? a) staining b) diffusion c) digestion d) active transport 12. Amino acids tend to diffuse from a blood capillary to the adjacent cell because a) this is the only direction they can move b) the brain directs the movement into cells c) the cell needs the amino acids to make protein d) the concentration of amino acids is lower in the cell 13. Cytoplasm in a plant cell will shrink if the cell is a) placed in a concentrated salt solution b) kept warm and moist and in medium light c) placed in distilled water d) exposed to a different concentration of nitrogen gas 14. A cell containing 98% water in its cytoplasm is placed in a 2% salt solution. It should.. a) lose water b)gain water c) neither lose nor gain water d) gain salt because of the high rate of diffusion 15. A cell is placed in distilled water and then transferred to a 5% salt solution. As a result of this procedure, the cell would be likely to.. a) get larger b) get larger , then smaller c) get smaller d) get smaller, then larger 16. A high concentration of calcium salts is normally found within the cytoplasm of a certain protozoan, while the surrounding environment contains a lower concentration of the calcium salts. The higher concentration in the protozoan is most probably the result of a) diffusion b) excretion c) active transport d) cellular dehydration 17. The unit of structure and function of all living things is a) an organ b) an atom c) a cell d) a nucleolus 18. According to the cell theory, which statement is correct? a) viruses are true living things b) all cells are basically unalike in structure c) mitochondria are found only in plant cells d) all cells come from preexisting cells 19. Chloroplasts and mitochondria are examples of a) cells b) tissue c) organelles d) organs 20. The term, " selectively permeable" is used in reference to the a) nucleus b) cell wall c)cytoplasm d) cell membrane 21. The part of a cell that is in most direct contact with the environment is the a) nucleus b) cell membrane c) mitochondria d) vacuole 22. Plant cell organelles that contain photosynthetic pigments are a) chloroplasts b) ribosomes c)chromosomes d) cell walls 23. An observable difference between onion skin cells and cheek cells is that the onion cells have a a) cell membrane b) nucleus c) vacuole d) cell wall 24. The sites of protein synthesis is the cytoplasm are the a) ribosomes b) chromosomes c) nuclei d) vacuoles 25. The watery environment in which most life activities of a cell take place is the a) cell membrane b) chloroplast c) cytoplasm d) vacuole 26. Transport of materials into and out of a cell is most closely associated with the a) nucleus b) cell wall c) ribosome d) cell membrane 27. Which organelle contains genetic material and controls most cell activities? a) nucleus b) cell membrane c) vacuole d) endoplasmic reticulum Photosynthesis and Cellular Respiration Important vocabulary: ATP Cellular respiration Chloroplast Energy Enzyme Glucose Mitochondria Photosynthesis Photosynthesis What do cells need to carry out everyday activities? ENERGY Energy: the ability to do work What is photosynthesis? The ability of plants to take sunlight and convert it into energy (sugar/glucose) Where does photosynthesis occur in plant cells? Chloroplasts Diagram on board: Photosynthesis formula: (enzymes) Sunlight + H2O + CO2 glucose + oxygen + H20 One of the final products of photosynthesis is glucose (a source of energy!!!)….How is glucose then broken down?????? (either by the plant or the animal that eats the plant?) Cellular Respiration!!!!!!!!!!!!!! Cellular respiration: the process by which cells break down glucose into an energy source the organism can use (ATP) Cellular respiration takes place in the mitochondria of the cell. Diagram: Cellular respiration formula: (enzymes) Glucose + oxygen H2O + CO2 + ATP What is ATP? Adenosine triphosphate Diagram: *energy is released when the 3rd phosphate bond is broken on an ATP molecule resulting in an ADP molecule (ADP-adenosine diphosphate) *ADP will reform ATP when another phosphate becomes available Reminder!!!!! Since plants are able to make their own food in the form of organic glucose they are considered Autotrophs!!!!! Animals cannot make their own food, they must go out and find it…therefore, they are considered Heterotrophs!!!!!! Anaerobic vs. Aerobic Respiration In most organisms, cellular respiration is carried out in the presence of oxygen Aerobic respiration: requires oxygen Anaerobic respiration: does not require oxygen Aerobic respiration is much more productive than anaerobic respiration! Aerobic respiration produces much more ATP than anaerobic respiration. *some organisms, like yeast and bacteria, carry on respiration without oxygen. *most organisms (humans) carry out cellular respiration with and without oxygen…but respiration using oxygen is much more efficient!!!! Fermentation (Anaerobic respiration): Fermentation: provides energy for cells without using oxygen 2 types of fermentation 1. Alcoholic fermentation: an anaerobic process where cells, such as yeast, convert glucose into CO2 and ethyl alcohol. (yields 2 ATP molecules) Formula: Glucose + yeast CO2 + ethyl alcohol + ATP Picture from regents: Muscle Fatigue: when the body undergoes extreme physical activity the cells are sometimes deprived of oxygen necessary for cellular respiration to take place. During muscle fatigue a characteristic burning may be felt in the muscles. What causes this burning sensation is Lactic Acid fermentation, a form of anaerobic cellular respiration that occurs in our bodies!!!! 2. Lactic Acid fermentation: an anaerobic process where body cells convert glucose into CO2 and lactic acid. (yields 2 ATP molecules) This process occurs during extreme muscle fatigue when the cells are deprived of oxygen. Formula: Glucose CO2 + ATP + lactic acid Diagram showing Photosynthesis and Cellular respiration occurring simultaneously: Comparison of Photosynthesis and Cellular Respiration Cellular Respiration Photosynthesis Glucose is ___________________ Glucose is ________________ Glucose is converted into __________ Sunlight is converted into ___________ Carbon dioxide ______________ Carbon dioxide _______________ Oxygen ______________ Oxygen _________________ Takes place in the ________________________ Takes place in the ___________________ Occurs in ___________________ cells Occurs __________________ cells Regents review questions: By which process are CO2 and H20 converted into carbohydrates? Transpiration respiration photosynthesis fermentation The conversion of light energy into chemical bond energy occurs within the cells of? molds yeasts dogs algae Glucose molecules may be stored in plants in the form of: oxygen starch nucleic acids amino acids Organisms capable of manufacturing organic molecules from inorganic raw materials are classified as: autotrophs heterotrophs plants both A and C The basic raw materials for photosynthesis are: Water and carbon dioxide Oxygen and water Sugar and carbon dioxide Carbon dioxide and oxygen Which word equation represents the process of photosynthesis? Carbon dioxide + water glucose + oxygen + water Glucose alcohol + carbon dioxide Maltose + water glucose + oxygen + water Glucose + oxygen carbon dioxide + oxgyen Which word equation represents the process of aerobic cellular respiration? Carbon dioxide + water glucose + oxygen + water Glucose alcohol + carbon dioxide + ATP ATP + water glucose + oxygen + water Glucose + oxygen carbon dioxide + water + ATP Autotrophic activity in plant cells is most closely associated with the organelles called: Mitochondria Ribosomes Lysosomes Chloroplasts In terms of nutrition, the functional difference between animals and plants is that green plants are able to: Synthesize glucose Break down carbohydrates Carry on aerobic respiration Form ATP molecules Most animals make energy available for cell activity by transferring the potential energy of glucose to ATP. This process occurs during: Aerobic respiration only Anaerobic respiration only Both aerobic and anaerobic respiration Neither aerobic and anaerobic respiration In animal cells, the energy to convert ADP to ATP comes directly from: hormones sunlight organic molecules inorganic molecules the organelles where cellular respiration take place are called the: mitochondria chloroplasts lysosomes ribosomes The substances that directly control the rate of reaction of the chemical processes of photosynthesis and cellular respiration are: phosphates ADP ATP enzymes Energy for use in cells is stored in the form of: Physical energy Chemical bond energy Heat energy Mechanical energy Energy released from the cellular respiration of glucose is: First stored within ATP Stored in the liver as fat Turned into fat Used directly for body activity As a direct result of the life process called cellular respiration in humans, Liquid wastes are eliminated from the body Food is digested and absorbed into the blood Energy is released from digested food within the cells Nutrients are transported within the cells Constructed response questions: 17. Compare photosynthesis and respiration with regard to each of the following: *source of energy *materials used by each process *location of each process in the cell *when each process occurs in plants and animals _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ 21. Do plants carry out cellular respiration? Explain your answer. __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ ____________________________________________________________ 20. Explain how photosynthesis and cellular respiration are cyclical in nature. _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ Reproduction and Development Important vocabulary: Asexual reproduction Crossing over Differentiation Egg Embryo Estrogen Fertilization Fetus Gamete Meiosis Mitosis Ovaries Placenta Progesterone Recombination Sex cell Sexual reproduction Sperm Testes Testosterone Uterus Zygote Asexual versus Sexual reproduction Asexual reproduction involves only one parent and results in one or more offspring that are genetically identical to the parent. Examples of asexual reproduction: 1. Binary fission: *Simplest form of mitosis (asexual reproduction) *The parent cell divides into two parts that are equal Fission in protozoa: nuclear division (mitosis) Cytokinesis (the division of cytoplasm) occurs 2. Budding: *parent divides into 2 unequal parts *parent and offspring are not the same size Diagram of yeast: 3. Spore formation: Spore: single specialized cells that are produced by certain organisms *formed asexually or sexually *mitotic cell division Diagram : 4. Regeneration: ability of an organism to re-grow lost body parts Ex- salamanders (only tail) Starfish (whole new starfish) Crab (lost claws) 5. Vegetative Reproduction: *most plants reproduce sexually (seeds), but asexual reproduction is also possible Roots, stems and leaves give rise to a new plant vegetative reproduction *undifferentiated cells (cambium or epithelial cells) divide mitotically then will differentiate into a new plant Diagrams of asexual vegetative reproduction: Sexual Reproduction Sexual reproduction involves two parents and results in offspring that have some genetic material (DNA) from each parent. The resulting offspring may be similar to one or both parents, but not identical *offspring receives half their genetic material from mom and half from dad Ex: Human reproduction Cell Division (mitosis and meiosis) Mitosis Why can’t a cell grow to one giant cell? *Diffusion limits size *Over long distances diffusion becomes slow and inefficient *Big cells would starve or die of a build up of wastes if they got too large What will a cell do before it gets too large? Divide Cell division = Cell Reproduction = Mitosis = Asexual reproduction What is the difference between Mitosis and Meiosis? Mitosis: the division of body cells *in humans: cells with 46 chromosomes Meiosis: division of sex cells (sperm and eggs) *in humans: cells with 23 chromosomes When a eukaryotic (a cell with a nucleus) cell divides it takes place in two stages: Mitosis: nucleus divides to form 2 identical nuclei Cytokinesis: cytoplasm divides Changes in the nucleus during Mitosis *the nucleus plays a major role in cell division Nucleus: control center of the cell *DNA (deoxyribonucleic acid) In non-dividing cells, DNA exists as CHROMATIN: spaghetti like twisted threads of DNA Diagram: When mitosis begins chromatin shortens and thickens into rod-like structures called chromosomes. The phases of mitosis: Interphase: *the phase when a cell is between mitotic cycles *growth period -grows in size -metabolizes -chromosomes replicate Prophase: *the first and longest phase of mitosis *replicated chromosomes become visible *centrioles move to opposite ends of the cell (poles) *nuclear membrane disintegrates *asters form around centrioles *spindle fibers form *replicated chromosomes move toward equator Metaphase: *replicated chromosomes attach to spindle fibers *chromosomes line up midline Anaphase: *separation of sister chromatids *each chromatid moves to an opposite pole *one complete set of chromosomes goes to one pole while an identical set goes to the other Telophase: : *phase begins once the chromosomes (chromatids) reach the poles *chromosomes unwrap chromatin *spindle breaks down *nuclear membrane reforms At the conclusion of telophase, cytokinesis occurs… *cell membrane pinches off *division of cytoplasm *2 daughter cells complete Diagram of mitosis: Meiotic Cell Division Meiosis and Sexual Reproduction Refresher: Asexual reproduction (Mitosis) the parent cell divides to produce offspring with the same genetic makeup as the parent. Sexual reproduction requires two different parent cells, one from mom and one from dad. *Sexual reproduction produces offspring that are genetically different from either parent. Gametes: sex cells (male: sperm/ female: egg) New life forms when the gametes join together (fertilization) Fertilization: the fusion of the nuclei of the male and the female gametes Zygote: the single cell formed from this fusion Gametes are formed by the process of MEIOSIS Meiosis: a kind of cell division that results in gametes with half the number of chromosomes as the parent cell How many chromosomes does a human have? 46 chromosomes!!!! Why must an egg and a sperm have 23 chromosomes each? When the sperm and the egg unite during fertilization the resulting baby must have 46 chromosomes…NOT 92!!! *each pair of chromosomes, one from mom and one from dad, are known as HOMOLOGOUS CHROMOSOMES Homologous chromosomes: a pair of chromosomes that are similar in size and shape, and have similar genetic content Cells that are homologous are known as: somatic cells (body) or diploid cells or 2n Somatic cells: body cells that have 46 chromosomes in humans (23 pairs) Somatic cells = body cells = diploid cells = 2n Haploid cell (n): a cell with one of each kind of chromosome These cells are our sex cells (gametes) Stages of Meiosis: Meiosis starts in 1 diploid cell (a cell with 46 chromosomes) (ovaries and testes) Meiosis ends with 4 haploid cells (cells with 23 chromosomes) The process of meiosis occurs in two parts meiosis I and meiosis II *the phases of each part are similar to mitosis Meiosis (interphase has already occurred) Prophase I: *each chromosome has already replicated *each homologous chromosome lines up with its pair, and becomes fastened at the CENTROMERE This process is called SYNAPSIS Each group of four chromatids is a TETRAD CROSSING OVER occurs Metaphase I: Tetrads line up across the equator Anaphase I: Tetrads separate (disjunction) You are now left with 23 replicated chromosomes Telophase I: Two daughter cells are formed with half the number of chromosomes as the parent cell. Chromosomes are already in their replicated form Prophase II: Chromosomes move toward equator Metaphase II: Chromosomes line up on the equator of both daughter cells Anaphase II: Chromatids separate each becoming a single stranded Chromosome Telophase II: Both daughter cells divide, forming 4 haploid (n) cells Diagram of Meiosis: Human Reproduction The Male Reproductive system: Testes (2): the male sex glands (gonads). *produce sperm (gametes) *produce testosterone (hormone) What does testosterone do? *development of secondary sex characteristics (body hair, muscle development and deep voice) Scrotum: a sac of skin that holds the testes *helps keep the sperm below body temp. *increased temp can kill sperm Vas deferens: a tube that leads upward towards the urethra from the epididymis. Urethra: the vas deferens empty the sperm into the urethra (the same tube that urine leaves through!!!!) ****sperm and urine do not leave the body at the same time Ejaculation: involuntary muscle contractions that force semen outside of the body. The Female Reproductive system: Ovaries (2): the female gonads (sex glands) *make eggs (female gametes) *each ovary contains 200,000 follicles (immature egg sacs) *only 500 eggs mature in each female lifespan *secrete estrogen What does estrogen do? *causes the development of secondary sex characteristics (breasts, broadened pelvis, distribution of body fat) *plays an important role in the menstrual cycle Ovulation: when an egg matures the egg is released from the ovary (only one ovary produces an egg each month of a mature female). An egg can be fertilized only for about 24 hours after ovulation occurs. Fallopian tube (oviduct): the tube that connects the ovary to the uterus. It is here that most eggs are fertilized by a sperm. Uterus: a thick walled, muscular pear shaped organ. If the egg is fertilized it will attach to the wall of the uterus and develop into a fetus. Cervix: the neck of the uterus Vagina: muscular passage from the uterus to outside the body. This is also known as the birth canal. ****The female is different from the male in that the urinary and reproductive systems are completely separate. The menstrual cycle (in humans): *in the human a mature egg leaves one of the ovaries about every 28-32 days *at this time the body prepares for a potential pregnancy by thickening the uterine walls with a rich supply of blood vessels *if the egg doesn’t become fertilized the uterus will shed the lining and the unfertilized egg as menstrual blood. (this is your period!!!!) *another egg will begin to mature as the cycle begins again. Stages of the menstrual cycle: 1st stage: follicle stage: pituitary secretes FSH (follicle stimulating hormone) which causes an egg to begin developing. This causes an increase in estrogen production. As the estrogen level increases the uterine wall thickens with blood vessels (10-14 days) 2nd stage: Ovulation: when the estrogen level reaches a certain point, the pituitary gland will start secreting LH (lutenizing hormone). When the LH level reaches a certain point, a mature egg will be released from the follicle within the ovary. (takes place on day 14) 3rd stage: Corpus luteum: the empty follicle will fill with a yellow body called the corpus luteum, which secretes the hormone progesterone. Increased progesterone levels maintain the growth of the uterine wall. (10-14 days) 4th stage: Menstruation: if fertilization does not occur, LH secretion decreases, the corpus luteum breaks down, and progesterone levels drop. This causes the uterus to shed its lining. This is menstrual blood. Fertilization and Development: When the male ejaculates, 200 million sperm are deposited inside the vagina just below the cervix. The sperm will begin their journey from there…. It is in the fallopian tube that the sperm will encounter the egg and fertilization occurs. (in vivo fertilization) Egg (ovum or gamete): *it is a round cell that is unable to move on its own…it is propelled through the oviduct by cilia. *contains a nucleus and mitochondria *larger than the sperm *contains half the number of chromosomes than the mother (23 chromosomes….haploid) Sperm: (gamete) *head, mitochondria flagellum and acrosome *head contains the nucleus and acrosome (contains enzymes to help penetrate the egg) *contains half the number of chromosomes than the father Fertilization: *joining of a sperm and egg *only one sperm can enter the egg *haploid (egg) + haploid (sperm) diploid (zygote) Zygote: first cell of life The zygote will then begin to divide by mitosis. Diagram: The zygote will then begin to divide (cleavage) into many identical cells that form a blastula…it is now an embryo Implantation: *after 5-10 days the embryo will begin to implant into the uterine lining *the embryo secretes enzymes to break some of the lining of the uterus and embeds itself within the uterus lining *after implantation, the embryo differentiates (gastrulation) forming layers that become tissues and organs *after 8 weeks the embryo is now a fetus. What is In Vitro fertilization? If a woman’s fallopian tubes are blocked or she has some other medical condition where she cannot conceive a child, in vitro fertilization may be attempted. Fertilization occurs in a petri dish and then the embryo will be placed in the uterus of the mother. Fetal Development: Placenta: temporary network of blood vessels that allows the exchange of nutrients and wastes between the fetus and the mother. Considered an organ Umbilical cord: rope-like connection between the placenta and the fetus Amniotic fluid: fluid that surrounds the fetus, giving it a stable environment and acts as a shock absorber Amniotic sac: membrane-lined sac that holds the fetus Uterus: thick walled, muscular organ where the baby develops Fetus: developing baby after eight weeks gestation Vagina: birth canal Cervix: narrow neck to the uterus that opens 10 cm during labor Diagram: Birth: Gestation period: length of pregnancy; 40 weeks in humans Labor: uterine contraction begin (muscle tightening of the uterus) *cervix begins to open (closed10 cm *contractions get stronger to push baby out of mothers body *after birth the umbilical cord needs to be tied off and cut. *after birth will deliver the placenta Twins: Fraternal twins: the mother ovulates two eggs that are fertilized by two different sperm! The babies will have different genetic material. Identical twins: one egg is fertilized by one sperm and the zygotes splits into two identical zygotes. The babies will have identical genetic material. Identical twins have to be the same sex (boy/boy or girl/girl) Amniocentesis: Regents review questions: 22. Each of the two daughter cells that results from the normal mitotic division of the original parent cell contains A. The same number of chromosomes but has genes different from those of the parent cell B. The same number of chromosomes and has genes identical to those of the parent cell C. One half the number of chromosomes but has genes different from those of the parent cell D. One half the number of chromosomes and has genes identical to those of the parent cell 23. The following list describes some of the events associated with normal cell division. 1. nuclear membrane formation around each set of newly formed chromosomes 2. pinching in of cell membrane to separate daughter nuclei and divide cytoplasm 3. replication of each chromosome to form double sets of double stranded chromosomes 4. movement of single stranded chromosomes to opposite ends of the spindle fibers What is the normal sequence on which these events occur? A. 1234 B. 3241 C. 3412 D. 4321 24. What is the result of normal chromosome replication? A. Lost or worn out chromosomes are replaced B. Each daughter cell is provided with twice as many chromosomes as the parent cell C. The exact number of centrioles is produced for spindle fiber attachment D. Two identical sets of chromosomes are produced 25. In non-dividing cells, the chromosome material is in the form of A. chromatids B. centrioles C. spindle fibers D. chromatin 26. The basic raw materials for photosynthesis are: A. Water and carbon dioxide B. Oxygen and water Sugar and carbon dioxide C. Carbon dioxide and oxygen 27. Organisms that reproduce asexually usually do so by a form of cell division called: meiosis mitosis gamete formation sperm formation 28. If the sperm cells of a cat contain 14 chromosomes, how many chromosomes would be found in the cells forming the liver of the cat? 14 7 28 36 29. A normal body cell of a giraffe contains 20 chromosomes. How many chromosomes would be present in one of the giraffe’s egg cell? 20 40 10 5 30. Compared to the parent cell, a daughter cell produced as a result of binary fission Has one half as many chromosomes Has twice as many chromosomes Is the same size, but has fewer chromosomes Is smaller but has the same number of chromosomes 31. A form of asexual reproduction that occurs in yeast is called Binary fission regeneration sporulation (spore formation) vegetative reproduction 32. A type of asexual reproduction in which new plants develop from the roots, stems, or leaves of an existing plant is called Binary fission sporulation regeneration vegetative reproduction 33. In human males, the maximum number of functional sperm cells that is normally produced from each primary sex cell is: 1 2 3 4 34. Haploid gametes are produced in animals as a result of: mitosis meiosis binary fission fertilization 35. Sexually reproducing species show greater variation that asexually reproducing species due to: Lower rates of mutation Higher rates of reproduction Environmental changes Recombination during meiosis 36. In animals, polar bodies are formed as a result of Meiotic cell division in females Meiotic cell division in males Mitotic cell division in females Mitotic cell division in males 37. During normal meiotic division of a diploid cell, the change in chromosome number that occurs is represented as 4n n 2n 4n 2n n n 1/2n 38. In a developing embryo, the process most closely associated with the differentiation of cells is called gastrulation menstruation ovulation fertilization 39. In mammals the placenta is essential to the embryo for Nutrition, reproduction, growth Nutrition, respiration, excretion Locomotion, respiration, excretion D. Nutrition, excretion, reproduction 40. What substances are involves in controlling the production of sperm and eggs in humans?: vitamins starches minerals hormones 41. Which is arranged in the correct sequence? Fertilization embryo development meiosis birth embryo development fertilization meiosis birth meiosis fertilization embryo development birth meiosis embryo development fertilization birth Constructed response questions: 21. Briefly discuss the function of the following structures in the development of the human embryo: placenta, umbilical, amniotic fluid _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ 22. Compare and contrast the processes of mitosis and meiosis. What is the function of each process. __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ ____________________________________________________________ 23. Compare and contrast the processes of sperm and egg production in terms of: i. where each process occurs ii. the relative numbers of gametes produced by each process ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ 24. Explain how the daughter cells produced during meiosis may be genetically different from one another even though they result from the same original diploid cell. Why is this variation important? Why are cells produced by mitosis not genetically different from one another? _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ GENETICS Genetics – The study of heredity – traits passed down from one generation to the next. Gregor Mendel (1850’s) – The Father of Heredity Mendel was a monk in Europe who grew pea plants and discovered basic principles of heredity that are still accepted today. Because of him, we know that certain traits in pea plants (and humans) are dominant. If an organism has one dominant gene and one recessive gene, the recessive trait will remain hidden and the dominant will show itself. For example, if a person received a brown eyed gene from one parent and a blue eyed gene from the other, then that person will have brown eyes. Pic of punnett square Offspring get their traits from genes found on chromosomes that are inside the egg and sperm cells. Each of these cells carries 23 chromosomes so that the baby ends up with 46. Genes are made of a chemical called DNA. DNA is made of smaller subunits called nucleotides. There are only four different nucleotides bases (A,T, C. & G) in the DNA of every living thing. So if every orgainism has the same 4 building blocks, then why don’t we all look the same? That’s because the order of the bases is what determines what we are like. Humans have 3 billion base pairs (A-T or C-G) and the different possible combinations are endless. How does the chemical DNA make my eyes brown or my height 6 foot? DNA synthesizes, or makes, the proteins that make up the important parts of living things. For example, the chemical that makes your eyes brown is a protein called melanin. If you have the gene for brown eyes, then the order of your DNA bases will be read and used to make this protein. Many people have the same gene for brown eyes or the genes to be 6 foot, but no two people look exactly alike because their DNA isn’t exactly alike. Except Identical twins. They look alike because they both came form one egg cell that split into 2 clone (identical) cells. Whenever a cell reproduces (Mitosis) it makes a copy of its DNA. This is called Replication. Sometimes there are errors in the DNA code. These errors are called Mutations. Mutations can happen during replication if the wrong base is used to make the new DNA strand. Pic of mutations (from review book) Harmful substances like cigarette smoke and the sun’s radiation can cause mutations. Often these mutations cause cancers like lung or skin cancer. GENETIC DISEASE People can be born with mutations that cause Genetic Diseases. Some common genetic diseases are : Sickle cell anemia, Cystic fibrosis and Tay sachs disease. Sickle cell is caused by a mutation in the gene for hemoglobin, the protein that carries oxygen in your blood. Because there is an error in the person’s DNA, there will also be an error in the hemoglobin that their DNA makes. The deformed hemoglobin causes the Red blood cells to be sickle shaped. These cells can’t carry enough oxygen and they can cause pain when they get stuck in blood vessels. Genetic engineering is a new technology that humans use to alter the genetic instructions in organisms. The idea of altering organisms to have more desirable traits, however, is not new. In fact, biotechnology – the application of biological science – has been producing useful products for thousands of years. Cheese and bread are just two examples of “biotech” products made with the use of microbes. Throughout recorded history, humans have also used selective breeding – a process that produces domestic animals and new varieties of plants with traits that are particularly desirable. Many meat products, for example, come from animals that have been bred to contain less fat. In addition, many of the fruits and vegetables we consume have been selectively bred to be larger, sweeter, hardier or even juicier. For example, corn plants originally grew wild and had tiny ears (left). After centuries of selective breeding, humans have produced the large ear that we are used to eating (right). GENE MANIPULATION In recent years, plants and animals have been genetically engineered by manipulating their DNA instructions. The result of this genetic manipulation is new characteristics and new varieties of organisms. Consequently, we have been able to produce plants with many beneficial traits. In one instance, plants can now contain genes with the instructions for making chemicals that kill the insects that feed on them. Scientists have also engineered bacteria that can be used to clean up oil spills or that produce human growth hormone. The basic method that alters genes in organisms uses special enzymes. These enzymes cut DNA segments in a way that allows the segments to be spliced, or moved and attached to DNA in a new organism. Once in the new organism, the transferred genes direct the new organisms cells to make the same protein product as the original organism. For example, when we move a human insulin-producing gene into a bacteria cell, the bacterium – and all its offspring- will produce large quantities of a hormone at low cost. Genes for other human proteins have also been inserted into bacteria cells, as illustrated below. Pic of gene splicing Figure. Genetic Engineering using bacteria: (A) A special enzyme is used to cut a segment of DNA from a human cell and a circular piece of DNA from a bacteria cell. (B) When the piece of human DNA is mixed with the open loop of bacterial DNA, they join in a closed loop. (C) That loop is then inserted into another bacterial cell, (D), where it will produce its protein product and be duplicated every time the cell divides. APPLICATIONS OF BIOTECHOLOGY The healthcare field has much to gain through our increasing knowledge of genetics and biotechnology. New methods enable us to locate and decode genes that cause diseases. Once we have a better understanding of the gene’s specific defect, we may be able to develop ways to treat victims of the disease. In some cases, we may be able to alter the DNA in affected cells and cure the person. Important voaculary: Biotechnology Cancer Chromosomes Clones Dominant DNA Genes Genetics Genetic Engineering Gregor Mendel Mutations Nucleotides Protein Synthesis Recessive Replication Splicing Review questions 1. Which is not a requirement of genetic material? a) it must be able to make a copy of itself b) it must be weak so that it can fall apart easily c) it must be able to mutate from time to time d) it must be able to store information 2. Which two bases are always found in the same amount in DNA? a) adenine and thymine b) adenine and guanine c) thymine and guanine d) cytosine and adenine 3. Watson and Crick contributed to the study of DNA by.. a) experimenting with pea plants b) recognizing that traits are inherited c) discovering the double helix structure of DNA d) mapping the entire human genome 4. The DNA molecule is formed from subunits arranged in a a) sequence with three kinds of bases b) circle with four kinds of bases c) sequence with four kinds of bases d) sequence with four kinds of acids 5. The base pairs in DNA are similar in arrangement to the a) sides of a ladder b) steps of a ladder c) railing of a staircase d) surface of a ramp 6. The order of subunits in a strand of DNA is called a a) subunit sequence b) linear sequence c) strand sequence d) nucleotide sequence 7. If one strand of DNA molecule is G-A-T-C-C-A-T, what is the sequence of the opposite strand ? a) G-A-T-C-C-A-T b) C-T-A-G-G-T-A c) A-T-G-G-A-T-G d) T-A-C-C-T-A-G 8. The organization of bases in DNA can be best likened to the.. a) arrangement of letters in a word b) kinds of tools in a garage c) number of books in a library d) colors in a rainbow 9. To pass along the genetic information, DNA must first undergo a) mutation b) replication c) digestion d) synthesis 10. What must organisms do to use the genetic information stored in DNA? a) rearrange the base pairs b) use it to make proteins c) combine the DNA strands d) change it into phosphates 11. The subunits of proteins are a) phosphates b) bases c) amino acids d) enzymes 12. During the first step in the replication of DNA, the a) double helix unwinds b) template is created c) subunits of DNA form pairs d) double helix winds itself 13. Genes can best be described as a) directions for making DNA b) directions for making protein c) subunits of proteins d) molecules that transfer information out of the nucleus 14. Which path correctly describes the flow of information in cells? a) DNA -> RNA -> protein b) protein -> RNA -> DNA c) protein -> DNA -> RNA d) RNA -> DNA -> protein 15. The role of the messenger RNA is to a) prevent mutations during DNA replications b) match ribose-containing subunits to subunits of DNA c) move the information in a base sequence out to the ribosomes d) translate the base sequence at the ribosomes 16. RNA receives information from DNA by a) binding with a double helix as a third strand b) matching with subunits of a single strand of DNA c) making an exact copy of the DNA molecule d) accepting proteins through pores in the nuclear membrane 17. What happens at the ribosome? a) the DNA strands separate b) RNA matches up with the DNA strands c) genetic information is mutated d) RNA is translated into amino acids 18. How many bases make up one codon? a) one b) two c) three d) four 19. What does a codon represent? a) a specific amino acid b) a specific base c) an RNA molecule d) an enzyme 20. The genetic code is .. a) different for every organism b) the same for all organisms c) constantly changing d) impossible to identify 21. The sequence of amino acids in a protein is determined by the a) speed at which translation occurs b) size of the cell involved c) number of ribosomes in a cell d) order of bases in the DNA 22. A mutation is inherited if it a) occurs in a gamete that is used in sexual reproduction b) occurs in a cell that under goes mitosis c) occurs only in the cells of the mother d) occurs only in the cells of the father 23. Scientists use restriction enzymes to a) limit the length of DNA molecules b) stop parts of DNA from replicating c) prevent certain genes from being expressed d) cut specific base pair sequences out of DNA 24. The molecules that can move cut pieces of DNA from one organism to another are called a) vectors b) splicers c) transformers d) combiners 25. Genetic engineering has been used to improve crop varieties by a) reproducing old genes for wild characteristics b) removing genes that cause them to get diseases c) inserting genes that make them diseases-resistant d) adding animal genes that make them grow faster 26. Why scientists insert human genes into bacteria? a) to give bacteria some human traits b) to make large amounts of human proteins c) to dispose of our defective genes d) to find out what the bacteria will do 27.When a human gene is inserted into a bacteria cell to become part of its DNA, it is an example of a) DNA fingerprinting b) biotechnology c) karyotyping d) defective genes 28. Why are bacterial cells useful in recombinant DNA technology? a) they reproduce quickly b) they reproduce slowly c) they are almost identical to human cells d) they can be placed within the human body 29. The bacteria that are genetically engineered to produce insulin for people do so with genes that originally come from a) other bacteria b) healthy cattle c) healthy humans d) chimpanzees Classification and Evolution Part I Classification The branch of biology that classify or organizers living things is called Taxonomy. There are over 10 million types of organisms or species on earth. The smallest being a single cell bacteria, the largest a giant red wood tree. Carl Linnaeus, a Swedish scientist developed modern taxonomy is the late 1700’s. Linnaeus used binomial nomenclature to name each species on earth. Giving in Latin a word that described to organism. All species are ranked form most complex to least complex staring in kingdoms / phylum / order / family / genus / species Example human kingdom animalia Phylum chordata – spinal cord Class mammalia – produces milk Order primates Family hominid Genus homo Species Homo sapiens Kingdoms of Life Kingdom Monera Example Bacteria Protista Ameba Paramecium Fungi Mushroom Yeast Mold Plant Moss Fern Flowers Animal Coral Sponge Mammals Phylogenetic tree shows how closely related different species are what common ancestress they might have shared. ameba kingdom protsta Mushrooms kingdom fungi bacteria kingdom monera Taxonomic Key Taxonomic Key tool used to identify a species already classified by taxonomy. Regents Living Environment Ecology and Human Impact on Ecosystems Part I Ecology Ecology Vocabulary Pioneer Organisms Biosphere Ecosystem Community Population Succession Biotic Food web Autotroph Biomass Producer Heterotroph Omnivore Carnivore Predator Prey Scavenger Saprophyte Commensalism Mutualism Parasitism Climax Community Ecology Abiotic Ecology The study of the interaction between living organisms and the physical environment. All living things are dependant on other living things and nonliving things to survive. Biosphere The portion of the earth where live exists. Ecosystem All the living things and the physical environment functioning together in a specific area. Community All the organisms in a specific area living together at the same time. Population All the members of the same species living together in the same area at the same time. How Ecosystems Function Ecosystems involve the interaction between abiotic and biotic factors. Abiotic Biotic not living and never was living or made by living things sunlight animals water plants air bacteria Ecosystems are self- sustaining units. Ecosystems must have a constant source of energy usually the sun. Ecosystems have the ability to cycle and recycle materials in them. Biotic Factor Relationships Living things transfer energy from the sun by photosynthesis to other organisms by eating. Food chain or web Shows the path of energy form the sun to other organisms. The more complex the path the more stable the ecosystem will become. Autotrophs or Producers Organisms that make their own food by photosynthesis from sunlight and CO2. Make up most of the Biomass of the ecosystem. Heterotroph or Consumer Depend on the organism for food Omnivores Eat both plants and animals Carnivores Eat other animals. Predators hunt living prey. Scavengers eat dead animal the find. Saprophytes or Decomposers Use dead material and waste from other living things for energy. Return nutrients back to the ecosystem to be reused. Examples are fungi mold and bacteria Ecosystem Energy Pyramid In each transfer of energy a small amount (10%) is lost so a constant input in is required. Other Biotic Factors Symbiotic Relationships Relationships between organisms that live together in a close association. Commensalism One organism benefits and the other organism is not harmed Example a fern living under the shade of a tree Mutualism Both organisms benefit Example protozoa in a cow’s stomach Parasitism One organism is harmed while the other organism benefits Example tapeworms living in a human’s digestive system Mutualism Competition In Ecosystems Different species living in the same habitat are unlikely to use the same limited resources Niche The resources used by a member of the ecosystem community. Only one species per niche can survive in nature. Parts of a species niche may overlap with another species. Ecosystem Formation An areas climate is the main factor in determining the type of ecosystem that will form. Ecological Succession The step-by-step replacement of one community by another community until a stable ecosystem is reached Pioneer Organisms The first living things to populate an area Examples Lichens moss grass Climax Community The stable community forming and ecosystem Example Deciduous trees Oak Hickory NYS Stages of Succession Lichens / grasses / shrubs / conifers / deciduous trees Biomes Common types of climax ecosystems found on Earth. Some factors that determine biome type. Latitude / altitude / rain fall / temperature Terrestrial Biomes – Land Tundra / taiga / Deciduous forest / tropical forest / grassland / desert Aquatic Biomes – water Marine / estuary / fresh Human Impact on the Environment Humans have modified the environment more then another species in history. Effecting one part of an ecosystem may have unintended effects on another part of the ecosystem. Glossary of Major Environmental Problems Acid Rain When coal is burned in a power plant small amounts of sulfur in the coal goes into the air out of the smoke stack. This smoke mixes with the moisture in the air becoming sulfuric acid. The acid falls to the earth as acid rain contaminating the environment. Ozone Hole There is a layer in the upper atmosphere that protects the earth from cancer causing UV ray of the sun called the Ozone Layer. The Ozone layer has been destroyed by a chemical known as CFC that comes from arousal spray cans and refrigerator coolant. A hole above Antarctica has formed in the ozone layer do to CFC use. CFC has now been banned and the ozone hole in getting smaller. Global Warming The earth is getting warmer which causes glaciers to melt and sea levels to rise. The increase in global temperature may be caused by high levels of carbon dioxide being released into the air by burning fossil fuels. The CO2 traps earth’s heat that would normally be released into space. Algae Blooms Fertilizes from farms, parks, golf courses and private laws wash into streams, rivers, lakes and eventually the ocean and cause huge amounts of algae to grow. When the algae dies and sinks to the bottom of the water, bacteria that decomposes them suck the oxygen out of the water killing many of the fish. Invasive Species Humans have introduced new organisms to an ecosystem. The new non-native or unnatural organism disrupts the natural environment. Zebra mussels are an example of an invasive species brought to the great lake from Asia in large cargo ships. Regents Living Environment Project Human Impact On The Environment How do these issues effect the environment we depend on? Topic Selections Environmental Issues Acid Rain Nuclear Waste Disposal Ozone Hole Algae blooms Deforestation Global Warming MTBE fuel additive Forest Fire Prevention Hudson River PCB Invasive species Pesticides Mercury contamination Name: ___________ Due Date: __________ Topic Selected: ______________ Test on all presentations will be given Power Point Documentary • Title page with picture Cover topic thoroughly include when applicable How humans caused the problem How the problem affects the environment How the problem affects Humans How can the problem be fixed Include opposing views • • • • • • Include at least 4 graphics (1 map/ 1 graph/ 1 table/ 1 diagram) One comprehensive, student generated picture, indicated as such that summaries the presentation All slides organized/ legible / max of 100 words per slide All slides Appropriate Graphic/ sounds /colors NPR article on separate slide listed with 5 bullet facts Glossary of 10 scientific terms. Have terms in bold on PowerPoint • 5 meaningful test questions with answers, which reviews the main points • Complete project on the schools system Store project in a folder in your proper class section Laboratory Skills Vocabulary Balance Compound light microscope Electronic balance Graduated cylinder Indicator Metric ruler Microscope Stereoscope Total Magnification Chromatography Dichotomous key Electrophoresis Graphs Mass Micrometers Stain Triple-beam balance Volume Laboratory Skills • Graduated cylinder – used to measure a liquid’s volume (the space it occupies) • • • Balance – used to calculate mass (a measure of the quantity of matter in an object). Triple-beam balance – has three beams (bars) and one pan. The balance needs to be a zero before you try to calculate the mass of something. The beams need to be moved until the pointer is at zero. The mass of the object is equal to the sum of the three beams. Electronic balance – measures automatically. • • • Most scientists use the metric system when collecting data and performing experiments Metric System – a universal decimal system of weights and measures based on the meter and the kilogram Metric ruler – used to measure length (meter) Metric ruler • Micrometers (µ µm) - tiny units used to measure things under the microscope 1000 µm = 1 mm • Microscopes - tools that produce magnified images of structures that are too small to see with the unaided eye Compound light microscope – uses one ocular lens, one objective lens and a light source Total magnification – calculated by multiplying the eyepiece times the obje ctiv e lens. • • • • Stereoscope – also known as a dissecting scope, has two ocular eyepiece lenses and one or more objectives. This type of microscope makes the image 3-D. It is mostly used with specimens such as insects, worms or flowers. Model – a representation of used to explain or demonstrate a process or structure; also used to predict what might occur in a new situation Microscope Parts of the microscope • Eyepiece or ocular – lens nearest the eye and used to look through (10x magnification) • Objective lenses - lenses closest to the specimen (4x, 10x and 40x magnification usually) • Stage – flat surface on which the specimen is placed • Diaphragm – controls the amount of light the passes through the specimen • Light source – provides light that passes through the specimen to make it visible (can be a light bulb or a mirror) • Coarse adjustment (focus knob) – focus under low power (up to 100x ). Usually larger and moves the lenses or the stage. • Fine adjustment (focus knob) – used to sharpen image (usually used with high power) Techniques for Using Microscope • Image will be upside-down and backwards • To move image, you need to move the slide in the opposite direction in which the organism appears to be moving (of how you want it to move) • Increase light as you move from low to high power • More of the image under low power, less detail • Less of the image under high power, more detail To use the compound light microscope: 1. Turn ON the light source or adjust the mirror. 2. Lower the stage. 3. Rotate to the 4x objective, if it is not already in place. 4. Clip in a slide. – the slide is moved about the stage mechanically using the two directional knobs to the right of the stage – locations of microscopic organisms on the slide may be recorded, using the vertical and horizontal calibration marks along each axis of the stage 5. Adjust the inter-ocular distance of the eyepieces to suit your eyes. 6. Use the COARSE FOCUS adjustment knob ONLY when using the 4X or 5X objective. Use the FINE FOCUS adjustment knob when using all other objectives. 7. Focusing may be improved by adjusting the left ocular: – cover your right eye –don’t squint – and focus using the adjustment knob surrounding the ocular – next, cover your left eye and focus using the fine focus adjustment knob 8. The iris diaphragm controls the amount of light passing through a specimen; optimize contrast/reduce glare by adjusting the iris diaphragm: – close the lever fully – next, slowly open the diaphragm 9. The condenser concentrates light on the specimen; optimize the light conditions by adjusting the condenser: – move the condenser to the top position, using the rack and pinion knob – next, slowly lower the condenser until the background conditions look good 10. Increase magnification by rotating the nosepiece to a higher objective, but use only the fine focus adjustment knob to focus with 10X and higher objectives: – when switching objectives, look at the objective to make sure you do not hit the slide – be extremely careful of any thick slides you use in this course; they are easily damaged by carelessness during focusing – LOOK at the slide when you change objectives or use the coarse focus Preparing a Wet-mount Slide 1. Using a pipette (eye dropper), add a small drop of water to the center of a clean slide. 2. Place the object to be viewed in the water. 3. Use forceps to position a coverslip at a 45° angle. As seen in the diagram below 4. Lower the coverslip slowly to avoid bubbles. Staining Specimens • Stains – can be used to make cell structures more visible • Iodine and Methylene blue are common stains used in the lab • Place a drop of the stain on the edge of the coverslip • Next, touch a small piece of towel to the opposite edge and the stain should be drawn across the slide under the coverslip Methylene Blue Lugol’s Iodine Additional Laboratory Techniques • Gel Electrophoresis – procedure used to separate mixtures of large molecules according to size, such as DNA and proteins. o Protein gel, a sample of biological material containing proteins is prepared by breaking open the cells in order to release the proteins o Next, the proteins are treated with both chemicals and heat o One of the chemicals used coats the protein molecules and gives them a negative charge o Small amounts of the prepared sample are placed in gel electrophoresis apparatus o The gel is placed between two electrodes (positive and negative) that are connected to a power supply o As charged particles move towards opposite charges, the smaller particles travel more quickly than the larger ones, separating the protein by size and charge. • DNA gel electrophoresis o Fragments of DNA are separated and will vary in size and number from one individual to another due to each person’s unique genetic codes o Special enzymes cut the DNA a specific points. o Next, small amounts of the DNA samples are placed in a semisolid gel. o The gel is located between two electrodes (positive and negative) that are connected to a power supply. o As charged particles move towards opposite charges, the smaller particles travel more quickly than the larger ones, separating DNA into a s distinct pattern that becomes visible through staining or a variety of other techniques. • The information provided by both Gel and DNA gel electrophoresis looks like a bar code. • The patterns can provide information about individual relatedness. • Used in identifying parents of children and in criminal investigations. • Chromatography – technique used for separating mixtures of molecules. o The rate at which a substance moves along the paper in a given solvent can be used to separate it from other substances o The mixture being separated is placed on paper to which it sticks. o Example: chloropyll extract from plant leaves is placed on filter paper, or chromatography paper, and causes very colorful bands of plant pigments One end of the paper has the extract, the other end is placed into a solvent (ex. Alcohol) As the solvent soaks into the paper and moves upward, substances in the mixture that do not stick tightly to the paper will be picked up by the solvent and move ahead quickly Others less attracted to the solvent will stick more tightly and move more slowly This results in formation of bands of the different substances on the paper Indicators – a substance that changes color when it contacts certain chemicals Litmus paper turns red or a shade of red in acids. Litmus turns blue or a shade of blue in bases. It is important to place a few drops or a small amount of the substance to be tested on the litmus paper when testing it. Do not dip the litmus paper in the substance to be tested. A paper which provides a more specific indication of the pH level of a substance is pH paper. This paper turns different shades of various colors which may be compared to a scale to determine the pH value. • 2. Bromthymol blue is an indicator used to show the presence of either carbon dioxide in solution or an acidic solution. Low levels of carbon dioxide or acid will result in the bromthymol blue solution remaining blue, while higher levels of carbon dioxide or acid will result in the bromthymol solution taking on a yellow tint. Frequently this indicator is used in biology labs to indicate photosynthetic activity (solution turns blue as CO2 is used) or respiratory activity (solution turns yellow as CO2 is added to the solution). 3. Lugol's solution (which is actually IKI) is a brown solution which turns black in the presence of starches. The test tube at the right shows Lugol's (iodine) solution mixed with a starch suspension. 4. Benedict's solution is used to detect the presence of simple sugars such as glucose. When a simple sugar is mixed in Benedict's solution and heated for a short period of time in a test tube, it goes through a variety of color changes, eventually ending as an orange-red or brick red color. The use of Benedict's solution before and after using it to detect the presence of the simple sugar glucose is shown in the pictures on the right. The pH Scale Acids and bases (alkalis) are common substances studied in science. The pH scale is used to indicate the relative strength of an acid of base. The pH scale goes from 0 to 14. A pH of 7.0 is considered to be neutral. The greater the pH is than 7.0, the more basic the substance is. The lower the pH is below 7.0, the more acidic a substance is. Stomach acid has a pH of approximately 2.0. 1. • Dichotomous Key - a key used to sort , name, and/or classify a particular organism. Typically consists of two statements that divide the things being classified into two groups. • Graphs – organize data to see trends and patterns and allows us to form opinions and to make comparisons quickly. o Appropriate labels on the axes and a title is a necessity o The dependent variable is plotted on the y-axis o The independent variable is plotted on the x-axis o The spacing between the numbers on both axes must be in equal increments o Four types of graphs: 1. Pie or circle graphs 2. Bar graphs 3. Histogram 4. Line graph 2. 3. 4. Multiple Choice Review Questions 1. Of the following, which instrument is most commonly used to observe the external features of a grasshopper's abdomen? 1. 2. 3. 4. ultracentrifuge microdissection instrument dissecting microscope electron microscope 2. A student observed a Paramecium under the low power objective of a microscope (100x) and then under high power (400x). The image of the Paramecium under low power, compared to the image of the same Paramecium under high power, would be 1. smaller and in a darker field of view 2. smaller and in a brighter field of view 3. larger and in a darker field of view 4. larger and in a brighter field of view 3. The width of a human hair is 0.1 millimeter. The width of this human hair in microns is 1. 1 u 2. 10 u 3. 100 u 4. 1000 u 4. A coverslip should be used for preparing a 1. frog for dissection 2. solution of iodine for food testing 3. wet mount of elodea (a simple plant) 4. test to determine the pH of a solution 5. To test for the presence of glucose, a student added the same amount of Benedict’s solution to each of the four test tubes. Two of the test tubes contained unknown solutions. The other two test tubes contained known solutions. The chart below shows the color results obtained after the solutions were heated in the four test tubes in a hot water bath. Data Table Tube Contents Color After Heating 1 Unknown solution + Benedict’s solution Royal Blue 2 Unknown solution + Benedict’s solution Red Orange 3 Water + Benedict’s solution Royal Blue 4 Glucose + Water + Benedict’s solution Red Orange The student could conclude that 1. All of the tubes contained glucose 2. Tubes 1 and 2 contained glucose 3. Tube 1 did not contain glucose, but tube 2 did 4. Tube 2 did not contain glucose, but tube 1 did 6. What is the approximate length of the earthworm shown in the diagram below? QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. (1) 9 mm (2) 90 mm (3) 10.6 cm (4) 106 cm 7. How much water should be removed from the graduated cylinder shown below to leave 5 milliliters of water in the cylinder? QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. (1) 6 mL (3) 11 mL (2) 7 mL (4) 12 mL 8. Compounds containing phosphorus that are dumped into the environment can upset ecosystems because phosphorus acts as a fertilizer. The graph below shows measurements of phosphorus concentrations taken during the month of June at two sites from 1991 to 1997. QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. Which statement represents a valid inference based on information in the graph? (1)There was no decrease in the amount of compounds containing phosphorus dumped at site 2 during the period from 1991 to 1997. (2) Pollution controls may have been put into operation at site 1 in 1995. (3) There was most likely no vegetation present near site 2 from 1993 to 1994. (4) There was a greater variation in phosphorous concentration at site 1 than there was at site 2. 9. While viewing a specimen under high power of a compound light microscope, a student noticed that the specimen was out of focus. Which part of the microscope should the student turn to obtain a clearer image under high power? (1) eyepiece (2) fine adjustment (3) coarse adjustment (4) nosepiece 10. To demonstrate techniques used in DNA analysis, a student was given two paper strip samples of DNA. The two DNA samples are shown below. Sample 1: ATTCCGGTAATCCCGTAATGCCGGATAATACTCCGGTAATATC Sample 2: ATTCCGGTAATCCCGTAATGCCGGATAATACTCCGGTAATATC The student cut between the C and G in each of the shaded CCGG sequences in sample 1 and between the As in each of the shaded TAAT sequences in sample 2. Both sets of fragments were then arranged on a paper model of a gel. The results of this type of DNA analysis are often used to help determine (1) the number of DNA molecules in an organism (2) if two species are closely related (3) the number of mRNA molecules in DNA (4) if two organisms contain carbohydrate molecules Constructed Response Questions 1. Base your answers to questions 1-4 on the information below and on your knowledge of biology. A student was working on an investigation to measure the relative activity of an enzyme at various pH values. He collected the following data: pH 2 – enzyme activity 10 pH8 – enzyme activity 50 pH 12 – enzyme activity 10 pH 4 – enzyme activity 20 pH 6 – enzyme activity 40 pH 10 – enzyme activity 40 1. What is the independent variable in this experiment? ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ 2. Organize the data above by filling in the data table provided below. Follow these directions when completing your data table. • Provide an appropriate title for the data table. • Fillin the first box in each column with an appropriate heading. • Arrange the data so that pH values are in increasing order. Title: 3. Construct a graph using the information in the data table, the following directions, and the grid provided. • Provide an appropriate title for the graph. • Make and label an appropriate scale on each axis. • Plot and connect the points. Surround each data point with a circle. 4. According to the data, this enzyme would probably work best at what pH value? (1) 7 and 8 (2) 2 and 12 (3) 6 and 7 (4) 4 and 10 2. QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. Immune System Vocabulary AIDS Antibodies Antihistamines B-cell Diabetes Dynamic Equilibrium Homeostasis Lymphatic System Microbe Parasite T-cells Vaccine Allergy Antigen Bacteria Cancer Disease Histamines Immunity Lymph Pathogen White Blood Cells Virus Homeostasis • Dynamic Equilibrium – the constant small corrections that normally occur to keep an organism’s internal environment within the limits needed to survive. • Homeostasis – the ability of an organism to maintain a stable internal environment even when the external environment changes. o Homeostasis is regulated by the endocrine and nervous systems. • Disease – any condition that prevents the body from working as it should • If the body fails to maintain homeostasis, disease may occur. • Many organisms, such as viruses, bacteria, fungi, and parasites may cause disease. Causes of Disease Cause of Disease Inherited disorders Exposure to toxins Poor nutrition Organ malfunction High-risk behaviors Examples Down syndrome, cystic fibrosis, sickle cell anemia Lead poisoning, radiation Scurvy (lack of Vit. C), and goiter (lack of iron). Heart attack and diabetes Lung cancer, drug addiction, skin cancer • Lymphatic System - a complex network of lymphoid organs that produce and transport lymph fluid from tissues to the circulatory system. The lymphatic system has three interrelated functions: (1) removal of excess fluids from body tissues, (2) absorption of fatty acids and subsequent transport of fat to the circulatory system and, (3) production of immune cells (such as lymphocytes and antibody producing cells). • Lymph - A clear, watery, sometimes faintly yellowish fluid derived from body tissues that contains white blood cells and circulates throughout the lymphatic system, returning to the bloodstream • The immune response is the defensive reaction of the body to foreign substances or organisms. The immune system also protects against some cancer cells which may arise in the body. • Immunity – the body’s primary defense against disease-causing pathogens • Pathogens – organism that invades the body, causing disease. o Pathogens may be viruses, bacteria, fungi and other parasites • If a pathogen or other toxic substances enters the body, this can lead to a disruption of the body’s ability to function normally. • Also, poor nutrition, organ malfunction and inherited disorders can lead to disruption of homeostasis. • Some pathogens can lead to cancer – abnormal cells division. o Exposing cells to certain chemicals and radiation increases mutations and thus increases the chance of cancer. o The mass of abnormal cells is called a tumor o Abnormal cells can be attacked by the immune system Pathogens and Disease Pathogen Virus Bacterium Description of Pathogen Viruses are particles composed of nucleic acid and protein. They reproduce when they invade living cells Bacteria are one-celled organisms Examples of Disease Viral diseases can spread quickly Ex. Common cold, influenza, AIDS and chicken pox Bacterial illnesses include strep throat, syphilis and food poisoning. Antiobiotics are used to Fungus Parasites Fungi are organisms made of either one or many cells. They include yeasts and molds. They eat by absorbing organic substances Some animals and onecelled organisms are parasites that survive by living and feeding on other organisms treat many bacterial diseases Ex. Athlete’s foot and ringworm. Fungicides and antibiotics are used to fight fungal disease Include leeches and tapeworms. Ex. Malaria and heartworm • Immune System – the body’s primary defense against disease-causing bacteria o Pathogens, foreign substances or cancer cells threaten our homeostasis and the immune system fights back • Antigens – a molecule found on the outer surfaces of cells that the immune system recognizes as either part of the body or an outside invader o Toxins can also act as antigens o All cells have antigens on their surfaces o The immune system can determine if the molecule is good or bad (foreign) o When immune system detects a foreign molecule it attacks it • Antibodies – proteins that either attack the invaders or mark them for killing o The marked invaders may be killed by white blood cells o White blood cells – leukocytes, protects the body from invasion by foreign substances and organisms (destroys by the process of phagocytosis) o B-cells make the antibodies to attack the foreign invader and the o T-Cell engulfs the invader and destroys it. • Microbe – microscopic organism that may cause and immune response • Vaccine – a substance made of weakened, killed, or partial pathogens and designed to protect the body from future invasions of that pathogen o When a vaccine is injected into the body, it triggers and immune response o Antibodies are produced to attack the foreign invader o The immune system “remembers” the specific pathogen by leaving behind white blood cells that have the antibody to protect against that pathogen. o Each antibody is specific for each pathogen • Virus – a nonliving particle or protein and genetic material that reproduces by invading the cell of a living organism • AIDS – Aquired Immunodeficiency Syndrome, a viral disease that attacks the immune system. Caused by a group of retroviruses known as HIV. o AIDS causes the a person to be unable to fight off disease, infection and cancerous cells because it attacks the T-cells (your ability to engulf pathogens) o People often die of infections in result of AIDS Overview of the Immune Response • Allergy – a rapid immune system reaction to environmental substances that are normally harmless o Causes of allergies: certain foods, pollen, and chemicals from insect bites o Immune system reacts by releasing histamines – a substance produced by white blood cells that cause a reaction (swelling, sneezing, rash, increase in mucus or in some cases throat closing) o Use antihistamines – reduce the effects of histamines and the symptoms they cause • Sometimes the immune system attacks the body’s own cells. Examples include: o Pancreas cells that produce insulin cause diabetes – a disease caused by the lack of insulin produced by the pancreas. o Transplanted organs come from another person and when put into a different body, may cause the immune system to detect them as foreign and attach it. To avoid rejection of the organ, patients can be injected with immunosuppresent drugs that will stop the immune response. Multiple Choice Review Questions 1. A malfunction of the lymph nodes would most likely interfere with the (1) (2) (3) (4) release of carbon dioxide into the lymph filtering of glucose from the lymph release of oxygen into the lymph filtering of bacteria from the lymph 3. Many bacteria that enter the circulatory system are engulfed and destroyed by (1) phagocytic white blood cells (2) pinocytic red blood cells (3) plasma (4) platelets 4. During a race, the body temperature of a runner increases. The runner responds by perspiring, which lowers body temperature. This process is an example of (1) maintenance of homeostasis (2) an antigen-antibody reaction (3) an acquired characteristic (4) environmental factors affecting phenotype 5. Homeostasis in living things is regulated by the action of (1) the nervous system, only (2) the endocrine system, only (3) both the nervous and endocrine systems (4) neither the nervous nor the endocrine system 6. The body makes chemicals that can help to destroy harmful viruses and bacteria. These chemicals are called (1) antibodies (2) vaccines (3) hormones (4) antibiotics 7. A vaccine can protect you against a disease because it (1) destroys toxic substances from bacteria before they can make you sick. (2) stimulates your immune system against the pathogen (3) kills any pathogenic bacteria in your body (4) changes pathogenic bacteria into harmless bacteria 8. Parasitic strains of E.coli may produce poisonous chemicals that attack living tissue ad cause disease in humans. These chemicals are called (1) antibodies (2) toxins (3) viruses (4) antibodies 9. Uncontrolled cell division is known as (1) meiosis (2) cancer (3) antibody production (4) sexual reproduction 10. The resistance of the body to a pathogen is called (1) immunity (2) antigen (3) cancer (4) infection Constructed Response Questions 1. Not all diseases are caused by pathogenic organisms. Other factors, such as inheritance, poor nutrition, and toxic substances, may also cause disease. Describe a disease or disorder that can occur as a result of one of these other factors. Your answer must include at least: • the name of the disease [1] • one specific factor that causes this disease [1] • one major effect of this disease on the body, other than death [1] • one way this disease can be prevented, treated, or cured [1] ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ ________________________________________________________________________ 2. Base your answers to questions 1 and 2 on the diagram of a slide of normal human blood below and on your knowledge of biology. QuickTime™ and a TIFF (LZW) decompressor are needed to see this picture. 1. An increase in the production of the cells labeled A is a response to an internal environmental change. State a change that might cause this response. [1] ______________________________________________________________________ ______________________________________________________________________ ______________________________________________________________________ 2. Describe one possible immune response, other than an increase in number, that one of the cells labeled A would carry out. [1] ______________________________________________________________________ ______________________________________________________________________ ______________________________________________________________________