Reprinted from Nature, Vol. 332, No. 6164, pp, 546-548, 7 April 1988 Macmillan Magazines Ltd., 1988 A role for the nuclear envelope in controlling DNA replication within the cell cycle J. Julian Blow & Ronald A. Laskey CRC Molecular Embryology Research Group, Department of Zoology, Downing Street, Cambridge CB2 3E1, UK In eukaryotes the entire genome is replicated precisely once in each cell cycle. No DNA is re-replicated until passage through mitosis into the next S-phase. We have used a cell-free DNA replication system from Xenopus eggs to determine which mitotic changes permit DNA to re-replicate. The system efficiently replicates sperm chromatin, but no DNA is re-replicated in a single incubation1. This letter shows that nuclei replicated in vitro are unable to rereplicate in fresh replication extract until they have passed through mitosis. However, the only mitotic change which is required to permit re-replication is nuclear envelope permeabilization. This suggests a simple model for the control of DNA replication in the cell cycle, whereby an essential replication factor is unable to cross the nuclear envelope but can only gain access to DNA when the nuclear envelope breaks down at mitosis. When sperm chromatin is incubated in homogenates of Xenopus eggs it is assembled into normal interphase nuclei surrounded by a nuclear envelope1-4 (Fig. la, b). When such extracts are permitted to synthesize protein (>40 µg protein per ml extract in 4 h), nuclei assembled in vitro subsequently undergo the early mitotic changes of chromatin condensation and nuclear envelope breakdown2 (Fig. lc, d). In addition, DNA assembled into nuclei in vitro is replicated efficientlyl,5-7. Bromodeoxyuridine density substitution shows that only a single round of replication occurs in a single incubation1 in the presence or absence of protein synthesis (Fig. 2a). The extract distinguishes replicated from unreplicated nuclei. Nuclei replicated in the presence of cycloheximide, and then transferred to fresh extract, do not re-replicate (Fig. 2h, filled symbols and Fig. 3h). If protein synthesis is permitted, however, replicated nuclei slowly acquire the ability to re-replicate in fresh extract (Fig. 2b, open symbols and Fig. 3a). The ability to re-replicate corresponds to the time at which chromatin condensation and nuclear envelope breakdown occur ( Figs 1, 2). To determine if nuclear envelope breakdown and chromatin condensation are the changes that permit nuclei to re-replicate, nuclei were replicated in the presence of cycloheximide and then given various treatments before transfer to fresh extract (Fig. 3c-f). Figure 3c shows the effect of treatment with Maturation Promoting Factor (MPF). This is an activity found in most mitotic or meiotic cells that can induce mitotic changes in interphase nuclei9-11. Treatment with MPF, which causes nuclear envelope breakdown and chromatin condensation, can substitute for protein synthesis in allowing nuclei to re-replicate when added to fresh extract (Fig, 3a-c). Figure 3d-f shows that nuclear envelope permeabilization alone is sufficient to allow re-replication. Thus when nuclei are replicated in the presence of cycloheximide, and then treated with agents that permeabilize the nuclear envelope, they can re-replicate in fresh extract. Lysolecithin, a lecithin analogue which inserts into lipid membranes and permeabilizes them, permits 43% of the replicated DNA to re-replicate (Fig. 3d). Melittin and phospholipase, which hydrolyses phospholipids in the nuclear envelope, permit 27% of the replicated DNA to re-replicate (Fig. 3e). Similarly, mechanical shear, such as that caused by pelletting the nuclei in a fixed angle rotor, permits replicated DNA to re-replicate (ref. 1 and data not shown). However, degradative treatments that do not permeabilize the nuclear envelope, such as phosphatase (Fig. 3f) and RNase (data not shown) do not allow re-replication. When only a fraction of the template DNA re-replicates Fig. 1 Protein synthesis permits mitotic changes in vitro. Sperm chromatin (3 ng DNA per µ1) was incubated for 5 h in extract plus (a, b) or minus (c, d) 100 µg ml-1 cycloheximide. Nuclei were examined under Hoechst 33258 UV fluorescence (a, c) or phase contrast optics (b, d). Scale bar 20 µm; all fields at same magnification, Methods. Extracts of Xenopus eggs were prepared by the method described1 with the following modifications. Prior to crushing, eggs were packed by centrifugation at 1,500 r.p.m. in an SW50 rotor (Beckman) for 1 min at 4°C, and all excess buffer was removed. Cytochalasin B 10 µg ml-1 was added to the extract after crushing. Extract was frozen with 3% v/v glycerol. (Fig. 3c-e) most nuclei re-replicate either fully or not at all (flow cytometry data, not shown). Therefore nuclear envelope permeabilization during mitosis is sufficient to permit nuclei to re-replicate completely in the subsequent interphase. We have previously discussed positive and negative regulatory models for limiting DNA replication to a single round per cell cycle12,13 but experiments performed during the course of this work exclude aspects of each of them (data not shown). Instead these results can be explained if an essential replication factor is unable to cross the nuclear envelope during interphase and can only gain access to DNA when the nuclear envelope breaks down at mitosis. This model is outlined in Fig. 4. In Fig 4a this Factor (Licensing Factor) is shown binding to chromatin during mitosis or at the start of an incubation. Before DNA can replicate, it must be assembled into a nucleus with a complete nuclear envelopel,4-6,14. In the model, no unbound Licensing Factor remains free in the nucleoplasm: possibly because it is stable in the nuclear environment only when bound to DNA, or because its only route for inclusion in the nucleus is by binding DNA, nascent nuclear envelope being very closely applied to the surface of the chromatin4 (Fig. 4b). Only after the DNA is assembled into a mature nucleus are replication forks initiated throughout the nucleus at the sites of bound Licensing Factor (Fig. 4c) Licensing Factor only supports a single initiation event where it is bound to the DNA, and is inactivated by either initiation or the passage of a replication fork (Fig. 4d). This means that the entire genome is replicated precisely once, and no re-replication can occur (Fig. 4e). Nuclei in G2 are unable to re-replicate because Licensing Factor in the cytoplasm cannot 2 10 20 Fraction 0 30 0 1 2 3 4 5 Time of transfer (hours) Fig. 2 The extract can distinguish replicated from unreplicated DNA. a, Density substitution of sperm chromatin incubated in vitro shows a single round of semi-conservative replication with or without cycloheximide. b, Time course showing that replicated DNA can be re-replicated an addition to fresh extract only in the presence of protein synthesis. Methods. a, Sperm chromatin (3 ng DNA per µl) was incubated in egg extract with α32P-dATP and 0.4 mM BrdUTP for 5 h; DNA was extracted and fractionated on CsCl density gradients. Density shown by arrows: HH 1.79; HL 1.75; LL 1.71. (□), Control (untreated) extract; (◆) extract with 100 µg ml-1 cycloheximide. b, Sperm chromatin (3 ng DNA per µl) was incubated in 20 µl extract with α32P-dATP, 0.5 mM BrdUTP, plus or minus 100 µg ml-1 cycloheximide, for various times, and then resuspended in 1 ml Buffer A (ref. 5). Nuclei were pelleted at 2,000 g for 2 min, and resuspended in fresh extract containing 3H-dATP, 0.5 mM BrdUTP, plus or minus 100 µg ml-1 cycloheximide. This extract was incubated for 4 h, when DNA was isolated and fractionated on CsCl density gradients1. (□), First and second extracts untreated (no cycloheximide). (◼), First and second extracts contained 100 µg ml-1 cycloheximide. Either first (●), or second (○) extracts only contained cycloheximide. gain access to the DNA until the nuclear envelope is permeabilized during mitosis. Thus this model can explain why G2 nuclei in G11 G2 cell hybrids cannot re-replicate until passage through mitosis15. Alternative models involving the escape of a diffusible inhibitor at mitosis would have to be much more complex than the one presented here. Neither the Xenopus egg nor egg extract require specific DNA sequences for DNA replication 1,6,13,16,17 , nuclear formation1,6,13,16,17 or for limiting DNA replication to a single round per cell cycle16,20. The occasional re-replication of plasmid DNA in incubations in vitro1 probably reflects the fragility of pseudo-nuclei assembled from pure DNA in vitro. The Xenopus embryo therefore differs from bovine papilloma viruses, which 0 30 20 10 0 30 20 10 0 0 20 30 40 Fig. 4 Model for the control of DNA replication in the Xenopus early embryo. a, Licensing factor (+) hinds to DNA. b, DNA is assembled into nucleus. c, Initiation at licensed sites occurs coordinately throughout individual nuclei5. d, Licensing factor is inactivated by initiation or the passage of a replication fork. e, Fully replicated DNA cannot re-replicate due to exclusion of licensing factor from DNA by nuclear envelope. Breakdown of the nuclear envelope during mitosis allows access of the Licensing Factor to the DNA, to prepare it for DNA synthesis in the next cell cycle. special cis-acting sequences to constrain viral replication to a single round per cell cycle21,22. Consistent with our model, G2 nuclei from HeLa cells must be prepared using detergent to be capable of replication in the first cell cycle after microinjection into Xenopus eggs23. But many eukaryotic cells, such as yeast, do not undergo nuclear envelope breakdown during mitosis. The model could still operate in these organisms so long as nuclei become permeable to the Licensing Factor during mitosis. The morphological changes of the yeast nucleus during mitosis24 invite the speculation that the model presented here may be applicable to all eukaryotic cells. require Fig. 3 Nuclear envelope permeabilization between incubation in two successive extracts allows re-replication of replicated nuclei (seen as HH DNA). a, Nuclei replicated in the absence of cycloheximide. b-f, Nuclei replicated in the presence of cycloheximide and treated with: b, mock treatment; c, maturation promoting factor; d, lysolecithin; e, mellitin and phospholipase; f, phosphatase. Incubation conditions were as for Fig. 2b. The percentage of 32 P-labelled DNA in each fraction is given. The 3H content of each fraction was also measured; this confirmed the identification of the peaks as arrowed. Methods. Panels a and b, nuclei were transferred as for Fig. 2b. c, Extract was supplemented with 50% volume of MPF11 for 2 h before nuclei were transferred as for Fig. 2b. d, Nuclei were pelleted as for Fig. 2b, resuspended in 100 µg ml-1 lysolecithin (100 µl) for 10 min, diluted with 400 µl Buffer A plus 2% BSA, underlayered with fresh extract, and transferred by centrifugation at 5,000 r,p.m. for 2 min in an SW50 rotor (Beckman). e, Nuclei pelleted as for Fig. 2b were resuspended in 100 µl Buffer A plus 50 µg ml-1 melittin, 50 µg ml-1 phospholipase A, 1 mM Ca2+,1 mM Mg2+ for 10 min, diluted with 400 µl Buffer A plus 2% BSA, 1 mM EDTA, and transferred as in d. f, Nuclei pelleted as for Fig. 2b were resuspended in 50 µ1 Buffer A pH 8.2 plus 25 units of calf intestine alkaline phosphatase, diluted and transferred as in d. 3 We thank David Blow, Steve Dilworth, Colin Dingwall, Richard Harland, Peter Lachman, Moira Sheehan and Jim Watson for their help. 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