Name/Group# CANOHilA Date StudentGuide AP'Biology Laboratory2 EnzymeCatalysis Objectives . Observe the action of an enzyme . Determine the rate of an enzyme-catalyzed reaction . Study the characteristics of an enzyme-mediated reaction . Observe the effect of heat on enzyme activiry Background to Activity A In this lab, you will study somecharacteristicsof enzymeaction.The specificreactionyou will investigateis the decompositionof hydrogenperoxideby the enzyme,catalase.At room temperature, hydrogenperoxidevery slowlydecomposes into water and oxygen.The addition of catalaselowersthe activationenergyof the reactionuntil it proceedsswiftly at room temperature.At the end of the reaction,the catalaseis unchangedand is availableto catalyzethe reactionof more hydrogenperoxide. Catalase,like most enzymes,is a protein. Its abiliry to form a complexwith hydrogenperoxideis based on its molecularshape.Any factor that can alter the shapeof a protein moleculecan be expectedto impact the ability of catalaseto facilitatethe decompositionof hydrogenperoxide. Activity A: Observing the Reaction Materials H2O2in labeledcup, catalaseon ice, unlabeled60-mL cup, test tube, test tube holder,test tube rack, syringelabeledHtOr, transferpipets,glassrod, scalpelor other sharpinstrument,pieceof potato or liver, boiling water bath, WashWatercup, Wasrecup. Caution: Youwill be workingwith cmdaroundhot liquids.YouwiII usea sharpscalpelor otherinstrumentto cut the cubeof potatoor lioxr. Introduction In Activity A, you will makeyour first observationsof the interactionof catalaseand hydrogenperoxide. @20 05 Car olina Biologic al Supply C o m p a n y 9-1 Procedure Testingfor enzymeactiuity 1. Usethe labeledH2O2sy:irnge to transfer10mL of H2O2into the unlabeled 6O-mLcup.Usea transferpipetto add 1 mL of catalase solutionto the unlabeled cup.Observefor 30 to 60 seconds. Do youobserve anythingthat indicatesthat a chemicalchangeis takingplace?If so,explain. 2. On the basisof your observationof the reactionand your knowledgeof chemistrywrite a balanced equationfor the reaction. 3. Give the followingfor this reacrion: a. Substrate: c. Intermediate complex that formed (not observed): d. Product(s): The effect of boiling on enzyme actiuity 1' Use the sametransferpipet (not theH2O2 syringe)to transfer3-5 mL of catalaseto a test tube. Placethe test tube in a boiling warerbath for five minures. 2. While waiting,rinseyour unlabeledcup. Use theH2O2 syringeto transfer10 mL of H2O2into rhe rinsedunlabeledcup. Use a clean,unusedtransferpipet to add 1 mL of the boiled caralaseto the unlabeledcup. Observethe results.What is the effectof boiling the caralase? Explain how boiling affectscafaIase activirV. 3. List at least three other factors that could affect the activiry of the catalase and explain why they would have an effect. O20 05 Car olina Biologic al Supply C o m p a n y 5-2 Testing for catalase inliving tissue 1. Rinseyour unlabeled6O-mLcup. Use a scalpelor other sharpinstrument to cur a cube about one cm on a sidefrom a pieceof potato or liver. Placethe cube in the unlabeledcup and macerarewith a glassrod. Caution: Do not usesomuchforcethatyou breaktherod. 2. Use the H2O2syringeto add 10 mL of H2O7to the cup of tissue,and then observe.Doesthe tissue contain catalase? Explainvour answer. Background to Activities B, C, and D In Activity B, you will determinethe amount of HrO, initially presentin solution.In Activity C, you will determinethe rate at which H2O, spontaneouslydecomposes at room temperature,and in Activity D, you will determinethe rate at which catalasedecomposes HrO2. In all of theseactivities,you will need to determinethe amount (concentration)of HrO2 left in solution.Youwill make this determinarionby usinga titration procedure.In a titration, you usea solution of known concentrationto determinethe concentrationof an unknown. An examplewould be usinga soludonof 0.1 N O.Jormal)NaOH to determinethe concentrationof an unknown acid.To do the dtration, you might put 5 mL of the acid in a beakerand add a pH indicator.The indicator is yellow in an acid but becomesgreenar a pH of 7 (neutral). Then you add 0.1 N NaOH drop-by-drop,stirring betweendropsuntil the solution in the beakerturns greenand remainsgreen.This is the endpoint of the dffation. The NaOH hasreactedwith (neurralized)all of the acid in solution;therefore,the amount of NaOH usedto reachthe endpoint is directly proportionalto the amount of acid that wasin solution.Let us saythat it took 25 mL of 0.1 N NaOH ro rirrate to the endpoint.Then the concentrationof acid in solution is equivalentto 25 mL of 0.1 N NaOH. In the followingactivities,you will use2o/opotassiumpermanganate(KMnOo) ro tirrare H2O2in solution.As potassiumpermanganate(darkpurple) is addedto the H202 solution,the permanganate ion (MnO*-) is reducedand becomescolorless.When all the H2O2in solutionhas reacted,the solution becomesa persistentpink or pale brown. This is the endpoint of the dffation. Youwill usethe volume of KMnOa neededto titrate to the endpoint as a measureof the amount of HrO, presentin the solution. Titration Protocol The titrations can be done with a 5- or 6-mL titration syringe(a syringewith a pieceof Tygon@ tubing attached)or with a buret. If you are usinga buret, fill it with KMnOa beforebeginning.If usinga titration syringe,draw in about 0.2 mL of air, then about 5 mL of KMnOa. If you do not draw in the air, it will be almostimpossibleto read the level of KMnO* from the scaleon the syringe. 1. Recordthe initial volume readingfor the titration syringeor burer. 2. Add one drop of KMnOa to the solution in your ritration cup. Gently swirl the cup until the purple color disappears. 3. RepeatStep 2 until the solution in the cup becomesa persistentpink or brown; that is, continue until the pink or brown color persistsafter swirlingthe cup. This is the endpoint of the titration. 4. Once you have reachedthe endpoinr,record the final volume of KMnO*. 5. Rinsethe titration syringeby drawingup water from your WashWatercup and expellingit into the Wastecup.Rinseyour other equipment,also. @2 00 5 Car olina Biologic al Supply C o m p a n y 5-3 Activity B: Determining the Initial (Baseline)Amount of H,O, in Solution Materials H2O, in labeledcup, H2SOain labeledcup, KMnOa in labeledcup, cup labeledBaseline, cup labeled Titration,syringelabeledHtOr, syringelabeledHrSO+,syringelabeled'Iiansfer,rransferpiper, titration syringe,WashWatercup,Wastecup, distilledwarerin cup labeleddH2O. Caution: Use Extreme Care When Handling Acids. H2SO4can irritate or bum the eyes,skin,and mouth. Auoid all skincontactwith thisand other chemicals. YourteacherwiII instructyou abouttheproper safety procedures handlinghazardous materials.KMnOo can stain skinand clothes.H2O2can discolorclothes. for Introduction In this activity, you will use the Titration Protocol to determine the initial amount of H,O, present in solution. You will use this amount as a baseline for activities C and D. Procedure Preparation of Baseline Sample 1. Usethe syringelabeledH2O2to put 10mL of H2Orin the 60-mLplasticcuplabeledBaseline. 2. Usethe plastictransferpipetto add 1 mL of distilledwaterfrom thedHrO cupto the cuplabeled (Distilledwateris usedto replacethe 1 mL of catalase Baseline. that is addedto rheHrOr in Activities A and D.) 3. Use the syringelabeledH2SO1to add 10 mL of 1 M H2SO4from the H2SO4cup ro the cup labeled Baseline. 4. Gently swirl the Baseline cup to mix the conrenrs. 5. Use the 5- or 6-mL syringelabeledTiansferto remove5 mL of solution from the cup labeledBaseline and put it in the cup labeled Titration. Rinse the Tiansfersyringeby drawing up somewater from the WashWatercup and expellingit into the Wasrecup. 6. Titrate your 5-mL sample(referto the Titration Protocol) to determinethe baselineamount of HrOr. Recordyour data in Thble 1 below. Table 1: Baseline InitialVolume mL F i n a l V ol ume mL A Volume mL A Volume= changein volume (lnitial- Final)for titrationsyringes;(Final- lnitial)for burets 7. You will usethe value of A Volumefrom Table 1 asthe baselineamount of H2O2presenrin soludon. Recordthe baselinebelow. Baseline= 0 20 05 mL Car olina Bjologic al Supply C o m p a n y 9-4 Activity C: The Uncatalyzed Rate of Decomposition of HrO, Materials H2O2in labeledcup, H2SO4in labeledcup, KMnOa in labeledcup, cup labeledUncatalyzed Decomposition, cup labeledTitration,syringelabeledHrOr, syringelabeledH2SOa,syringelabeled 'Iiansfer,titration syringe,transferpipet, WashWater cup,Wastecup,distilledwater in cup labeled dH2O, cup labeledH2O, Overnight. Introduction In this activity,you will determinethe rate at which HrO2 spontaneously decomposes when exposedto room temperaturesand ambientlight {or a 24-hourperiod. Preparation Use the H2O2 syringeto transfer15 mL of H2O, from the H2O2 cupto rhe 60-mL plasticcup labeled H2O2Ouernrght. Store the cup uncoveredat room temperaturefor approximately24 hours. Wait24 hoursbeforeproceedingwith ProcedureSrep 1, below. Procedure 1. Use the syringelabeledHrO, to transfer10 mL of H2O2from the H2O2C)vemrghr cup to the 6O-mL plastic cup labeled Uncatalyzed D ecompo sition. 2. Use the transferpipet to add 1 mL of distilledH2O from the dH2O cup ro the cup labeied (Distilledwater is usedto replacethe 1 mL of caralasethat is addedto Uncatalyzed Decomposition. the H2O2in activitiesA and D.) 3. Use the 10- or 17-mLsyringelabeledH1SO4to add 10 mL of 1 M H2SO4from the labeledH2SO4 cup to the cup labeledl)ncata\zedDecomposition. 4. Gently swirl the UncatalyzedDecomposition cup ro mix the conrenrs. 5. Use the 5. or 6-mL syringelabeledTransferto remove5 mL of the reactionmixture and put it in the cup labeled Titration. Rinse the 'Iiansfer syringeby drawing up warer from the WashWatercup and expellingit into the \X/asre cup. 6. Titrate your sample(referto the Titration Protocol) to determinerhe amount of H2O, left in solution after24 hours.Recordvour dara in Table2 below InitialVolume mL FinalVolume mL A Volume mL Table 2: Uncatalyzed Decomposition The amount o{H2O2 that hasdecomposedis equalto the Baselinedeterminedin Activiry B minus A Volumefrom Table2. The amount of H2O2that spontaneously decomposedat room temperarure mLl24 hours. 0 20 05 Car olina Biologic ai Supply C o m p a n y 5-5 Activity D: The CatalyzedRate of Decomposition of HrO, Materials H2O2in labeledcup,H2SOa in labeledcup,KMnOoin labeledcup,catalase on ice,cuplabeledTitration, syringe labeledHrOr, syringe labeledH2SOa, syringelabeledTiansfer, titrationsyringe, piper, rransfer WashWater cup,Waste cup,andcupslabeled respectively 10 sec,30 sec,60sec,120sec, andIBOsec. Introduction In this activity,youwill determinethe rateat whichcatalase decomposes HrOz.To do this,youwill add catalase to a measured amount of H2O2, and after a predetermined lapse of time (10 sec, 30 sec, 60 sec, etc.) you will add H2SO4 to halt the reaction. Once the reaction is stopped, you will titrare ro derermine the amount of H2O2 left in solution. You will subtract this amount from the baseline that you determined in Activity B to determine the amount of H2O2 decomposed over the timed interval. You will graph the resulting data and calculate the rate at which catalase was decomposed by catalase. Read the following directions thoroughly before beginning. Procedure Lineup the 60-mLplasticcupswith the labels10 sec,30sec,60 sec,120 sec,and lB0 sec.Usethe syringe labeledHtC),to add 10mL of H2O2to eachcup. Beforebeginningeachtest, premeasure10 mL of H2SOain the H2SO4syringe,so you can stop the reactionpreciselywhen required. One studentshouldadd the reagentswhile another studentkeepsthe dme. For the lO-secondtime trial: 1. Use the transferpipet to add 1 mL of catalaseextract to the 1Oseccup. 2. Gently swirl the l0 seccup to mix the contenrs. 3. At 10 seconds, add 10 mL of H2SO4to rhe cup. For each time trial, repeatstepsI through 3, asabove,but allow the reactionsto proceedfor 30, 60, l2O, or 180 seconds,as assigned, beforeaddingthe 10 mL of H2SOa. Titrating the Time Trials Use the rinsedsyringeto remove5 mL of solution from the l0 secreactioncup and placeit in the plastic cup labeled Titration. Rinse the Tiansfersyringeby drawing in water from the WashWatercup and expellingit into theWastecup. Titrate accordingto the Titration Protocol.If you overshootan endpoint,you will have enoughsolutionfor a secondtitration. Recordyour resultsin Thble3. Repeatfor each assignedtime trial. 02 00 5 Car olina Biologic al Supply C o m p a n y 9-6 Table 3: CatalyzedDecomposition 10 Sec 30 Sec 60 Sec 120Sec 180Sec lnitial Volume Final Volume A Volume HzO, Decomposed (BaselineA Volume) Analysis of Results,Activity D: The CatalyzedRate of Decomposition of Hror. 1. Vhy wasit necessary to determinea baselinefor the HrO,? 2. Why did the addition of H2SOastop rhe reacrion? 3. Graph your data from Table3 for H2O2decomposedby catalase.Title the graph and supplythe following information: a. The independentvariableis b. The dependentvariableir . Plot the independentvariableon the x-axis,and the dependentvariableon the y-axis. 4. \Uhat doesthe line on your graph represenr? @2 00 5 Car olina Biologic al Supply C o m p a n y 5-7 5. What does your graph tell you about the rate of the reaction over time? 6. When an enzymeis mixed with an excessof its substrate,it will react with the substratear a constantrate. The reactionwill continue at the sameconstantrate as long as the substrateis presentin excess.As the substrateis consumedby the reaction,there will be lesssubstrateavailable to react with the enzyme,and the rate of the reactionwill slow.The rate of the reactionwhile the substrateis presentin excessis calledthe initial rate. At a given temperatureand pH, the initial rate of a given enzyme/substrate reactionwill alwaysbe the same. Look at your graph.The initial rate of the catalaseft1r.O,reacrionis represenredby the linear (straight)portion of the line on your graph.Usingyour graphand dara,calculatethe rate of the catalaseA{rO2reactionfor the following time intervals:O-10 sec,1O-30sec,30-60 sec,60-120 sec, and 120-180sec.This is easilydone by referencingyour graph.For example,supposeyour graph showsthat 0.1 mL of H2O2had beendecomposed at 10 seconos. Reaction Rate (ml/sec) : Yz - Yt or X z-X l Ay Ax \7here Yr : 0.0mL Yz: 0.1mL :Osec ^1 x2 : 10sec then : ReactionKate 0.1mL 10sec 0.01mlisec Calculatethe resultsfor your data. Recordyour resultsin a Data Thblethat you constructbelow. 7. On the basis of your results, what is the initial rate of rhe catalaseftfrO, reacrionl 0 20 05 Car olina Biologic al Supply C o m p a n y 5-O Tiile: O20 05 Car olina Biologic al Supply C o m p a n y