Advanced Placement Biology Instructor – Mrs. P. Sidelsky BCC CAP Program Review Sheet References The Lifewire – Purves Life – The Science of Biology- 7th Edition The Bioweb Study Suggestions Study diagrams Use either the flash cards on the Internet or make your own flash cards for vocabulary words Study old tests. Study Packets( molecules, cells, and microscopy) Use the guided activities, interactive quizzes, and online quizzes on the Lifewire. Each chapter has a list of animations and activities. Many we have done in class or have been assigned for review as a part of chapter work Use Quia Games Focus of Exam – Molecules, Cells, and the Structural and Molecular Basis of Cells Chapters Covered on Exam Chapter 2 – Emphasis on Molecules, Covalent Bonding( Polar and Covalent), Water and Its characteristics, Acids and Bases, Functional Groups, and Intermolecular Interactions Chapter 3 - Macromolecules, Basic Four Groups of Macromolecules, Structure, and Function Chapter 4 – Structure of Cells, Plant and Animal Cells, Examples of animal cells, The Endomembrane System, Cytoskeleton, Energy Organelles, Nuclear compartment, Membranes, Vocabulary. Chapter 5 ( description of cell membrane and cell wall as it applies to cell structure) Chapter 27 – Microbiology – The details of Prokaryote cell structure, Cellular morphology, good and bad bugs( pathogenic and helpful bacteria) Chapter 28 – Dawn of Eukarya – Protists – animal like, plant like, fungal like – The Endosymbiont theory, the evolution of the eukaryote cell, evidence for the evolution of the energy organelles, functions of the cellular organelles Additional topics – Laboratory – Electrophoresis Spectrophotometry Chromatography Graphing Dissolved oxygen and primary productivity Habitat selection and pill bugs Microscopy Aseptic techniques – Microbiological manipulation Micropipetting Microscopy ( Light and Electron Microscopy) Taxonomy – Classification – Cladograms. Three Domains Archaea and Bacterial Domains Dawn of Eukarya and Eukarya Microsopy – Types of Microscopy, Light, Electron microscopy, Phase Contrast, fluorescent microscopy, slides and staining Cytotoxicity Diagrams on Exam Major Molecules Prokaryote cell structure Morphology of prokaryote cells Plant and animal cells Mitochondria and chloroplasts Endomembrane system structures Pictures of laboratory cells Antibiotic resistance and sensitivity assay Electron Micrographs Vocabulary – Chapter Overview Chapter Two Molecule Covalent bond Non polar and polar covalent Dipole Hydrogen bond Intermolecular forces Surface tension Adhesion Cohesion Capillary action Specific heat Hydrophobic Hydrophilic Acidic Basic Polarity Charge Organic acids Organic bases Functional group( basic definition and significance) Characteristics of the following and molecules Hydroxyl Carboxyl Amino Sulfhydryl Ketone Aldehyde Phosphate Organic Molecules Alkanes Alkenes Alkynes Cyclic Aromatic Single, double, and triple covalent bonds Hydrocarbons Organic acids/Bases Alcohols Chapter 3 Hydrolysis Dehydration synthesis Explain the importance to biochemical reactions How can you recognize these reactions What key molecule is involved in both of these reactions? Macromolecules – Function of carbohydrates, lipids, proteins, and nucleic acids. Origin of macromolecules from the Primordial Soup – Stanley Miller experiment( page 36) Monomer and polymer Bond formation Carbohydrates Lipids Nucleic acids Proteins Amino acids Sugars – monosaccharides( Glucose and fructose and disaccharides( sucrose and lactose). Hexose and pentoses( deoxyribose and ribose) Storage Polysaccharides ( amylose and glycogen) Structural polysaccharides ( chitin and cellulose) Fatty acids – saturated and unsaturated. Trans fatty acids and health Triglycerides Steroids – cholesterol and hormones Vitamins – Vitamin A, D, E, and K. Nucleic acids – RNA and DNA Purines and pyrmidines Nucleotide and nucleoside Double helix ( complementary base pairing, directionality of the strand, 3’ and 5’, hydrogen bonds, phosphodiester bonds) RNAs( t- RNA, mRNA, rRNA( 16s rRNA) ATP Protein structure – primary , secondary, tertiary, quaternary Polypeptide chain Alpha helix and beta sheet Folding of the molecule Collagen and hemoglobin( examples of quaternary structure) Amino acids ( types). Basic structure of amino acids. Classification of amino acids Chapter 27 – Three Domains – Focus on Archaea and Bacteria Carl Woese and Karl Stetter – Their contributions Archaea Extremophiles Halophiles Acdiophiles Thermophiles Hyperthermophiles Psychrophiles Psychrotrophs Methanogens Prokaryote cell structure Capsule Cell wall ( Gram Positive and Gram Negative) Cell membrane Mesosome Nucleoid region Chromosome characteristics in prokaryotes Plasmids Flagella Pili ( sex which are conjugative and attachment which are called fimbriae) Inclusions( starch and phosphates) Morophology Coccus – streptococcus, staphylococcus, and diplococcus Bacilli – streptobacilli and bacilli with endospores Spiral – vibrio, spirillum, and spirochetes Pathogens Toxins ( endotoxins and exotoxins) Flagella ( motility) and Fimbriae( attachment) Antibiotic resistance and susceptibility Bad Bugs Clostridium( sp) Borrelia burgdorferi Staphylococcus aureus ( MRSA) Streptococcus pyogenes( strep throat) Streptococcus ( GAS). Group A streptococci E. coli ( O 157:H7) Shigella Salmonella Yersinia pestis Wigglesworthia glossinidia Anthrax Neisseria ( sp) Major Nutritional Categories( describe) Important Photoautotrophs ( phototrophs, photolithoautotrophs) Chemoheterotrophs(chemoorganoheterotrophs) Chemoautotrophs( chemolithoautotrophs) Photoheterotrophs Chapter 28 – Dawn of Eukarya Major Concepts Endosymbiosis ( Primary and secondary) Steps in the transition from prokaryote to eukaryote Endomembrane system, compartmentalization, and organelles Terms Cladogram Taxonomy Monophyletic Polyphyletic Alveolata Diplomonads and parabasalids Oomycetes Slime molds Dinoflagelates Euglenoids Kinetoplastids Chlorophyta Choanoflagellida Fungi, animals, and plants Amoeba Apicomplexams Brown and red algaes Diatoms Cell structures Vacuoles Water vacuoles Flagella Cilia Cell walls Eye spots Macronucleus Micronucleus Life Cycle Sexual – Conjugation Asexual Alternation of generations Fungal life style – saprophytes( saprobe) Be able to identify Diatoms Amoeba Euglena Paramecium Filamentous alage Colonial algae( Volvox) Chlamydomonas Parasitic Life Cycle Malaria – Plasmodium – Anopheles mosquito( vector) Sleeping sickness – trypanosome – Tsetse fly( vector) Chapter 4 ( Overview) Lynn Margulis- Evidence for endosymbiosis Cell organelle packets Microscope packets Structure and function of cell organelles Endomembrane system Lysosomal function Attached and free ribosome and protein synthesis( class notes) Cytoskeleton ( centrioles, spindle fibers, cilia, and flagella) and movement – motor proteins( dynein and kinesin) Components ( actin and myosin) Energy organelles ( mitochondria and chloroplasts) Structure and function of eukaryote nuclear compartment Cell membrane Cell Wall ( Plants) Plant and animal cells ( comparison). Diagramatic and structural Electron Micrographs – Identification of cell organelles Analysis of Plant, Liver, and Salivary glands