Designed for optimal performance and confidence in your results Novex® protein separation, blotting, and detection systems Thoughtfully designed products for accurate, reproducible results Novex® protein separation, blotting, and detection systems ǩSuperior protein resolution from advanced separation and transfer technologies ǩUltrasensitive protein detection ǩRapid, consistent results from run to run Today the Novex® brand includes more than just gels. It also covers high-quality products and reagents designed to work with the original gel product line, including the sharpest, most accurate prestained and unstained molecular weight standards; uniquely formulated, sensitive stains; the iBlot® 7-Minute Blotting System, the BenchPro® 4100 Western Processing System, and western detection kits. Using these products together helps ensure complete protein separation with tight band resolution, accurate molecular weight estimation, complete transfer, easy post-transfer processing, and sensitive detection. 2 Contents Protein separation 4 Electrophoresis and precast gels 9 Gel casting essentials 10 Large protein separation 11 Standards 13 Stains Western transfer 15 Transfer equipment Western detection 17 Detection equipment 18 Detection essentials 3 Gel electrophoresis High-performance, high-quality precast gels and gel casting essentials If you are doing standard one-dimensional protein separation, we have Novex® solutions, and this guide will help you select the separation tools that fit your research. The Novex® gel line consists of several different chemistries, well formats, and gel sizes, so you get the separation you need for accurate downstream results. One-dimensional protein separation. Gel casting accessories Tris-glycine gels NuPAGE® gels Application Pour-your-own essentials: preassembled empty cassettes, buffers, reagents Precast convenience with Laemmli chemistry Straight protein bands, longest shelf life Protein resolution Medium Medium High Protein integrity Medium Medium High Shelf life NA 1–2 months 8 months (Tris-acetate) 16 months (Bis-Tris) Average run time 90 min 90 min 35 min Separation range 6–500 kDa 6–500 kDa 1.5–300 kDa (Bis-Tris) 30–400 kDa (Tris-acetate) Gel % available NA 4%, 6%, 8%, 10%, 12%, 4–20%, 4–12%, 14%, 16%, 18%, 8–16%, 10–20% 4–12%, 8%, 10%, 12% (Bis-Tris) 3–8%, 7% (Tris-acetate) Pack sizes available NA 5- and 10-packs 2- and 10-packs Gel dimensions Mini: 8 x 8 cm, 1 or 1.5 mm thick Midi: 8 x 13 cm, 1 mm thick Mini: 8 x 8 cm, 1 or 1.5 mm thick Midi: 8 x 13 cm, 1 mm thick Mini: 8 x 8 cm, 1 or 1.5 mm thick Midi: 8 x 13 cm, 1 mm thick Maximum sample volume/well 25 µL (1 mm) 37 µL (1.5 mm) 25 µL (1 mm) 37 µL (1.5 mm) 25 µL (1 mm) 37 µL (1.5 mm) Maximum protein load per band for optimal resolution* NA 0.5 µg 0.5 µg * On 1.0 mm, 10-well gel, detected by Coomassie staining. 4 ® NuPAGE Gels The NuPAGE® precast gel system is a revolutionary highperformance polyacrylamide gel system. Gels are available in both Bis-Tris and Tris-acetate formulations and in a variety of acrylamide percentages (Table 1, Figure 2). The unique NuPAGE® gel formulations minimize the “smiles” and poor resolution seen with other gel types. The neutral-pH gel chemistry and buffer system avoid chemical sample modifications that occur in alkaline environments. In addition, proteins transfer from NuPAGE® gels more efficiently, resulting in higher detection signals during western analysis. ǩ Superior protein band resolution and stability ǩ Faster sample run times ǩ Longer product shelf life Table 1. Two NuPAGE® types to choose from. Gel type Percentages availablex Separation range Shelf life Average run time Applications Bis-Tris 8%, 10%, 12%, 4–12% 1.5–300 kDa 16 months* 35–50 min Separation of small- to medium-sized proteins; simple sample reduction; protein sequencing, mass spectrometry, techniques where protein integrity is crucial Tris-acetate 7%, 3–8% 30–400 kDa 8 months * 60 min Excellent separation of large molecular weight proteins Ordering information for NuPAGE® Mini Gels. Each box of NuPAGE® Mini Gels includes 10 gels. For additional pack sizes, please visit our website at www.lifetechnologies.com/nupage 1.0 mm thickness 1.5 mm thickness Gel type and percentage 10 wells 12 wells 15 wells 2D well 10 wells 15 wells Bis-Tris 10% NP0301BOX NP0302BOX NP0303BOX NP0306BOX NP0315BOX NP0316BOX NP0317BOX Bis-Tris 4–12% NP0321BOX NP0322BOX NP0323BOX NP0326BOX NP0335BOX NP0336BOX NP0337BOX Bis-Tris 12% NP0341BOX NP0342BOX NP0343BOX NP0346BOX Tris-acetate 7% EA0355BOX EA03552BOX EA03555BOX EA0358BOX EA03585BOX EA0359BOX Tris-acetate 3–8% EA0375BOX EA3752BOX EA0378BOX EA03785BOX EA0379BOX EA03755BOX EA0376BOX 2D well Ordering information for NuPAGE® Midi Gels. Each box of NuPAGE® Midi Gels includes 10 gels. Without Midi Gel Adapters With Midi Gel Adapters (10)* Gel type and percentage 12+2 wells 20 wells 26 wells 12+2 wells 20 wells 26 wells Bis-Tris 8% WG1001BOX WG1002BOX WG1003BOX WG1001A WG1002A WG1003A Bis-Tris 10% WG1201BOX WG1202BOX WG1203BOX WG1201A WG1202A WG1203A Bis-Tris 4–12% WG1401BOX WG1402BOX WG1403BOX WG1401A WG1402A WG1403A Tris-acetate 3–8% WG1601BOX WG1602BOX WG1603BOX WG1601A WG1602A WG1603A * By attaching the Midi Gel Adapter (Cat. No. WA0999) to the gel cassette, you can run the midi gels in the Bio-Rad Criterion™ Cell. 5 A B Gel tanks and buffers All Novex® gels are available in the 8 x 8 cm mini gel format and a larger 8 x 13 cm midi size for higher throughput. Run up to two mini gels at a time in the XCell SureLock® Mini-Cell (Figure 1A). Use the XCell4 SureLock™ Midi-Cell (Figure 1B) to simultaneously run up to four midi gels. Each midi gel can run up to 26 samples, allowing electrophoresis of over 100 samples at a time. With a Midi Gel Adapter (Cat. No. WA0999), Novex® Midi Gels can be run in a Bio-Rad Criterion™ Cell. Figure 1. The Xcell SureLock® protein electrophoresis cells. (A) XCell SureLock® Mini-Cell (Cat. No. EI0001) for running one or two NuPAGE® or Novex® mini gels. (B) XCell4 SureLock™ Midi-Cell (Cat. No. WR0100) for running up to four NuPAGE® or Novex® midi gels. Product Quantity Cat. No. 1 EI0001 XCell4 SureLock Midi-Cell 1 WR0100 PowerEase® 500 Power Supply 1 EI8600 250 µL NP0004 10 mL NP0009 NuPAGE Antioxidant 15 mL NP0005 NuPAGE® LDS Sample Buffer (4X) 10 mL NP0007 250 mL NP0008 500 mL NP0001 5L NP0001-02 500 mL NP0002 5L NP0002-02 500 mL LA0041 NuPAGE MOPS SDS Buffer Kit (for Bis-Tris gels) contains 1 each of NP0001, NP0004, NP0005, NP0007 1 kit NP0050 NuPAGE® MES SDS Buffer Kit (for Bis-Tris gels) contains 1 each of NP0002, NP0004, NP0005, NP0007 1 kit NP0060 NuPAGE Tris-Acetate SDS Buffer Kit (Tris-acetate gels only) contains 1 each of LA0041, NP0004, NP0005, NP0007 1 kit LA0050 NuPAGE® Transfer Buffer (20X) 125 mL NP0006 1L NP0006-1 ® XCell SureLock Mini-Cell ™ ® NuPAGE Sample Reducing Agent (10X) ® NuPAGE® MOPS SDS Running Buffer (for Bis-Tris gels only) (20X) NuPAGE® MES SDS Running Buffer (for Bis-Tris gels only) (20X) NuPAGE® Tris-Acetate SDS Running Buffer (20X) ® ® Upgrade your gels to NuPAGE® gels If you would like to upgrade to NuPAGE® gels from Tris-glycine gels, visit us at lifetechnologies.com/nupage for an easy conversion table. 6 6 Tris-acetate† Bis-Tris* 8% Bis-Tris Gel w/MES running buffer 8% Bis-Tris Gel w/ MOPS running buffer 10% Bis-Tris Gel w/ MES running buffer 10% Bis-Tris Gel w/ MOPS running buffer 4–12% Bis-Tris Gel w/ MES running buffer 4–12% Bis-Tris Gel w/ MOPS running buffer 12% Bis-Tris Gel w/ MES running buffer 12% Bis-Tris Gel w/ MOPS running buffer 3–8% Tris-acetate Gel w/ TA running buffer 7% Tris-acetate Gel w/ TA running buffer 0% 260 kDa 260 kDa 160 kDa 260 kDa 260 kDa 10% 260 kDa 260 kDa 160 kDa 260 kDa 20% 160 kDa 110 kDa 80 kDa 160 kDa 110 kDa 60 kDa 30% 110 kDa 160 kDa 50 kDa 80 kDa 40 kDa 60 kDa 60 kDa 110 kDa 160 kDa 50 kDa 160 kDa 80 kDa 110 kDa 60 kDa 80 kDa 50 kDa 500 kDa 500 kDa 60 kDa 290 kDa 50 kDa 110 kDa 290 kDa 240 kDa 160 kDa 240 kDa 116 kDa 30 kDa 40 kDa 97 kDa 80 kDa 20 kDa 50 kDa 160 kDa 40 kDa 30 kDa 50 kDa 110 kDa 40 kDa 80 kDa 60 kDa 80 kDa 40% 160 kDa 110 kDa 260 kDa 80 kDa 60 kDa 50% 40 kDa 20 kDa 40 kDa 30 kDa 30 kDa 50 kDa 60 kDa 60% 30 kDa 15 kDa 15 kDa 20 kDa 55 kDa 40 kDa 20 kDa 66 kDa 15 kDa 20 kDa 15 kDa 66 kDa 97 kDa 10 kDa 50 kDa 70% 116 kDa 10 kDa 30 kDa 30 kDa 3.5 kDa 10 kDa 40 kDa 55 kDa 15 kDa 40 kDa 80% 10 kDa 20 kDa 20 kDa 30 kDa 90% 3.5 kDa 3.5 kDa 15 kDa 3.5 kDa 10 kDa 20 kDa 40 kDa 15 kDa 10 kDa 10 kDa 100% * Migration patterns of Novex® Sharp Protein Standards (Cat. No. LC5800, Pre-stained; Cat. No. LC5801, Unstained) on NuPAGE® Bis-Tris gels. † Migration patterns of HiMark™ Unstained Standard (Cat. No. LC5688) on NuPAGE® Tris-acetate gels. Figure 2. Migration patterns achieved in NuPAGE® gels. For optimal results, protein bands should migrate within the gray shaded areas. To learn more about additional Novex® gel formulations, percentages, and formats, go to lifetechnologies.com/novex1d 7 Precast Laemmli-style gels for protein analysis— Tris-glycine gels Novex® Tris-glycine polyacrylamide gel chemistry is based on the Laemmli system, with minor modifications for maximum performance in the precast format. These gels do not contain SDS and can therefore be used to accurately separate both native and denatured proteins. Tris-glycine gels provide reproducible separation of a wide range of proteins into well-resolved bands (Figure 3). Tris-Glycine Gels † Large proteins* (116–500 kDa) 4% 0% 6% Small proteins† (3–60 kDa) Mid-size proteins (20–250 kDa) 8% 10% 12% 14% 16% Wide range† (6–200 kDa) 18% 4–12% 8–16% 4–20% 10–20% 500 kDa 260kDa kDa 260 500 kDa 10% 260 kDa 260 kDa 290 kDa 20% 260 kDa 260 kDa 160 kDa 160 kDa 30% 240 kDa 160 kDa 260 kDa 110 kDa 290 kDa 110 kDa 80 kDa 60 kDa 160 kDa 110 kDa 80 kDa 50 kDa 40% 60 kDa 240 kDa 80 kDa 110 kDa 160 kDa 160 kDa 110 kDa 110 kDa 80 kDa 80 kDa 60 kDa 60 kDa 50 kDa 40 kDa 50 kDa 260 kDa 20 kDa 20 kDa 20 kDa 40 kDa 15 kDa 15 kDa 10 kDa 40 kDa 110 kDa 80 kDa 50 kDa 40 kDa 50 kDa 30 kDa 30 kDa 20 kDa 40 kDa 60 kDa 20 kDa 15 kDa 50 kDa 40 kDa 80% 60 kDa 60 kDa 10 kDa 30 kDa 50 kDa 80 kDa 110 kDa 60 kDa 110 kDa 160 kDa 110 kDa 50 kDa 97 kDa 60 kDa 40 kDa 60% 160 kDa 160 kDa 160 kDa 30 kDa 70% 80 kDa 30 kDa 30 kDa 110 kDa 260 kDa 40 kDa 60 kDa 80 kDa 116 kDa 260 kDa 40 kDa 50 kDa 160 kDa 50% 160 kDa 260 kDa 30 kDa 10 kDa 15 kDa 15 kDa 50 kDa 10 kDa 20 kDa 90% 166 kDa 10 kDa 66 kDa 30 kDa 40 kDa 100% 30 kDa 15 kDa 10 kDa 20 kDa 55 kDa 97 kDa 20 kDa 15 kDa 10 kDa 15 kDa Figure 3. Migration patterns of protein molecular weight standards in Tris-glycine gels. For optimal results, protein bands should migrate within the gray shaded areas. Tris-glycine gels are available in a variety of acrylamide percentages, and in the mini or midi format. *Migration patterns of HiMark™ Unstained Standard (Cat. No. LC5688) on Tris-Glycine Gels. †Migration patterns of Sharp Protein Standards (Cat. No. LC5800, Pre-stained; Cat. No. LC5801, Unstained) on Tris-Glycine Gels. To learn more about Novex® gels, go to lifetechnologies.com/buyproteingels 8 ® Novex gel casting equipment From high-purity acrylamide to gel combs, our do-it-yourself ingredients and equipment make gel casting easy and efficient. Product Quantity Cat. No. 200 mL R-33400 30 mL 15524-010 UltraPure Acrylamide 500 g 15512-023 UltraPure™ N,N´-Methylenebisacrylamide 100 g 15516-024 ™ 1 kg 15504-020 ™ UltraPure Sucrose 5 kg 15503-022 UltraPure™ 10% SDS Solution 4 x 100 mL 15553-027 1L 24730-020 500 g 15525-017 Cassettes, 1.0 mm 25/pack NC2010 Cassettes, 1.5 mm 25/pack NC2015 12 + 2 well 10/pack WC1012 Combs, 1.0 mm, 1 well 25/pack NC3001 Combs, 1.0 mm, 10 well 25/pack NC3010 Combs, 1.0 mm, 12 well 25/pack NC3012 Combs, 1.0 mm, 15 well 25/pack NC3015 Combs, 1.0 mm, 2 well 25/pack NC3003 Combs, 1.0 mm, 2D well 25/pack NC3002 Combs, 1.0 mm, 5 well 25/pack NC3005 Combs, 1.5 mm, 10 well 25/pack NC3510 Combs, 1.5 mm, 15 well 25/pack NC3515 Combs, 1.5 mm 2D well 25/pack NC3502 Midi Cassette Combs, 20 well 10/pack WC1020 Midi Cassette Combs, 26 well 10/pack WC1026 500 g 15505-035 2 kg 15505-050 Acrylamide, polymerizing agents, and buffers Rhinohide™ polyacrylamide gel strengthener concentrate, sufficient additive for 1 L of 30% acrylamide/bis-acrylamide (37.5:1) UltraPure™ TEMED ™ UltraPure Tris ™ UltraPure SDS Gel cassettes Gel combs Denaturing agents UltraPure™ Urea Visit our website at www.lifetechnologies.com/novexessentials for more products. 9 Reliable analysis of very large protein complexes Native Complex Purification and Analysis System ǩ NativePAGE™ Bis-Tris gels for sensitive, high-resolution separations ǩ NativeMARK™ Unstained Protein Standard for accurate molecular weight estimation ǩ NativePure™ Purification Systems for efficient purification of native protein complexes The Native Complex Purification and Analysis System is a novel set of tools for the analysis of very large protein complexes, membrane protein complexes, and super complexes. ™ NativePAGE Bis-Tris Gel System The NativePAGE™ Bis-Tris Gel System is a precast polyacrylamide mini gel system that provides a sensitive and high-resolution method for analysis of native membrane protein complexes and native soluble proteins, molecular mass estimations, and assessment of native protein purity. It is based on the blue-native polyacrylamide gel electrophoresis technique developed by Schägger and von Jagow. Use this system to maximize resolution of large proteins (>10,000 kDa), analyze membrane protein complexes in their native, undenatured conformations, and obtain better resolution than with traditional Tris-glycine native electrophoresis (Figure 4). Product NativeMARK™ Unstained Protein Standard The NativeMARK™ Unstained Protein Standard is a ready-touse protein marker that enables accurate molecular weight estimation of proteins using NativePAGE™, Tris-glycine, or NuPAGE® Tris-acetate gels. Proteins resolve into distinct bands in the range of ~20–1,200 kDa. A kDa 1 1,236 1,048 720 480 242 146 B 2 3 4 5 kDa 1 2 3 4 5 1,236 1,048 720 480 242 66 146 66 20 20 Figure 4. Improved separation with NativePAGE™ gels. Native electrophoresis was performed with (A) 4–12% Tris-glycine gels and (B)NativePAGE ™ 4–16% gels. Both gels were loaded with NativeMARK ™ standards (lane 1) and 18 mg spinach chloroplast extract solubilized in 0.25%, 0.5%, 1.0%, and 2.0% dodecylmaltoside (lanes 2–5). Gels were stained with the Colloidal Blue Staining Kit. Quantity Cat. No. 10 gels BN1001 NativePAGE 3–12% Bis-Tris Gels (15 well) 10 gels BN1002 NativePAGE™ 4–16% Bis-Tris Gels (10 well) 10 gels BN1003 Native protein analysis NativePAGE™ 3–12% Bis-Tris Gels (10 well) ™ ™ NativePAGE 4–16% Bis-Tris Gels (15 well) 10 gels BN1004 NativeMARK™ Unstained Protein Standard 250 µL LC0725 NativePAGE™ Running Buffer Kit 1 kit BN2007 NativePAGE Running Buffer Kit 1 kit BN2008 NativePAGE™ 20X Running Buffer 1L BN2001 ™ 250 mL BN2002 ™ 10 mL BN2003 ™ 0.5 mL BN2004 ™ NativePAGE 20X Cathode Buffer Additive NativePAGE 4X Sample Buffer NativePAGE 5% G-250 Sample Additive * NativePAGE™ gels are available in an 8 x 8 cm mini gel format. NativePure™ Affinity Purification Kits NativePure™ Affinity Purification Kits allow you to easily purify interacting protein complexes for analysis. There are two kits currently available: the NativePure™ Mammalian Affinity Purification Kit and the NativePure™ Lentiviral Expression and Affinity Purification System. Both offer Gateway® vectors for simplified expression in multiple expression systems. To learn more about native protein analysis, go to lifetechnologies.com/native 10 Accurate molecular weight estimations The sharpest, most accurate prestained and unstained MW standards Sharp prestained and unstained protein standards Protein separation is often accompanied by band identification. A variety of Novex® molecular weight (MW) protein standards are available to help you make the most accurate size estimations possible. Our complete line of Novex® protein molecular weight markers is designed for convenience and accuracy in electrophoresis band identification. To learn more about protein molecular weight standards, go to lifetechnologies.com/proteinstandards ǩ Sharpest bands—clearer estimation of MW compared to thick bands ǩ Broadest MW range—estimation over a larger range (3.5–260 kDa) ǩ Ladder-like separation of bands—evenly spaced pattern across the readable range for easy identification and comparison SeeBlue® Pre-stained Standard BenchMark™ Prestained Protein Ladder HiMark™ Pre-stained Protein Standard SeeBlue® Plus2 Prestained Standard Sharp Pre-stained Protein Standard Application Basic, routine MW MW marker for Trisglycine gels only Ideal for large proteins Multiple color bands, easy estimation Easiest to interpret MW; best size estimation # of bands/ 9 bands 10 bands 9 bands 10 bands 12 bands # of colors 1 color 2 colors 2 colors 3 colors 12 colors Band sharpness Low Low Low Medium High MW range 4–250 kDa 10–190 kDa 30–460 kDa 4–250 kDa Gel compatibility ® NuPAGE Bis-Tris Tris-glycine only Tricine 3.5–260 kDa ® Tris-acetate NuPAGE Bis-Tris NuPAGE® Bis-Tris Tris-glycine Tricine Tricine Tris-acetate Tris-glycine Tris-glycine Tris-glycine Pre-stained protein standards for easy and clear band identification kDa Product Quantity kDa Cat. No. kDa kDa kDa 188 460 198 260 Pre-stained protein standards SeeBlue® 98 160 500 µL 110 80 LC5625 2 x 250 µL 62 171 ~85 60 49 ~60 49 38 ~40 28 30 117 ~50 38 40 10748-010 ~120 62 50 BenchMark™ 268 238 ~190 28 HiMark™ 250 µL 20 LC5699 ~25 18 17 15 71 ~20 14 14 SeeBlue® Plus2 500 µL LC5925 10 2 x 250 µL 55 ~10 41 6 6 3.5 Sharp ~15 LC5800 3 3 Standard Cat. No. Sharp Pre-stained 31 SeeBlue® Plus2 SeeBlue® BenchMark™ Pre-stained HiMark™ Pre-stained LC5800 LC5925 LC5625 10748-010 LC5699 NuPAGE® 4–12% Bis-Tris Gel w/ MES SDS buffer NuPAGE® 4–12% Bis-Tris Gel w/ MES SDS buffer NuPAGE® 4–12% Bis-Tris Gel w/ MES SDS buffer 4–20% Tris Glycine Gel NuPAGE® 3–8% Tris-Acetate Gel w/ Tris-acetate SDS buffer 11 Unstained protein standards NativeMark™ Unstained Protein Standard Mark12™ Unstained Standard BenchMark™ Protein Ladder Sharp Unstained Protein Standard HiMark™ Unstained Protein Standard Application Routine MW estimation in denaturing gel electrophoresis MW estimation and quick orientation MW estimation and band identification MW estimation for large proteins MW estimation in native gel electrophoresis Number of bands 12 15 12 9 8 MW range 2.5–200 kDa 10–220 kDa 3.5–260 kDa 40–500 kDa 20–1,200 kDa Orientation band(s) No Yes Yes No No Number of orientation band(s) 0 2 (20 and 50 kDa bands more prominent) 3 (20, 50, and 110 kDa bands more prominent) 0 0 Gel compatibility NuPAGE® Bis-Tris; SDS-PAGE Tricine, Trisacetate, Tris-glycine NuPAGE® Bis-Tris; SDS-PAGE Tricine, Trisacetate, Tris-glycine NuPAGE® Bis-Tris; SDS-PAGE Tricine, Trisacetate, Tris-glycine Tris-acetate Tris-glycine, NativePAGE™ BisTris, Tris-acetate Band sharpness Low Medium High Low Low Unstained protein standards Quantity Cat. No. Sharp 2 x 250 µL LC5801 2 x 250 µL 10747-012 1 mL LC5677 HiMark HMW 250 µL LC5688 MagicMark™ XP Western 250 µL LC5602 BenchMark™ His-tagged 125 µL LC5606 BenchMark™ Fluorescent 125 µL LC5928 IEF Marker 3–10 500 µL 39212-01 250 µL LC0725 ™ BenchMark Ladder Mark12™ ™ ™ NativeMark Unstained protein standards for accurate molecular weight estimation kDa kDa kDa 260 220 200 160 160 110 80 120 100 90 80 70 60 Protein standard for western blots kDa Specialty protein standards kDa kDa IEF marker kDa kDa pI 8.3 8.0 500 60 50 40 30 15 25 120 100 116 97 50 50 7.4 40 32 6.9 21 6.0 146 20 20 66 5.3 5.2 11 4.5 15 55 242 30 15 3.5 2.5 10 480 60 40 30 66 15 63 30 40 6 3.5 720 98 20 20 kDa 1,048 7.8 155 40 14.4 10 120 80 50 31 21.5 160 120 60 60 160 160 80 80 36.5 40 20 290 240 116.3 97.4 66.3 55.4 50 30 220 Native marker 10 4.2 20 10 40 3.5 Standard Novex® Sharp BenchMark™ Mark12™ HiMark™ MagicMark™ XP Cat. No. LC5801 10747-012 LC5677 LC5688 LC5602 NuPAGE® 4–12% Bis-Tris Gel w/ MES, stained with Coomassie® R-250 NuPAGE® 3–8% Tris-Acetate Gel w/ Tris-acetate SDS buffer stained with SimplyBlue™ SafeStain NuPAGE® Bis-Tris Gel, blotted to nitrocellulose, detected w/ WesternBreeze® Chemiluminescent Kit NuPAGE® 4–12% NuPAGE® 4–12% Bis-Tris Gel w/ MES, Bis-Tris Gel w/ MES, stained with stained with SimplyBlue™ SafeStain Coomassie® R-250 12 Standard Cat. No. BenchMark™ His-tagged LC5606 NuPAGE® 4–12% NuPAGE® 4–12% Bis-Tris Gel w/ MES, Bis-Tris Gel w/ MES stained w/ SDS buffer, blotted to InVision™ nitrocellulose, detected In-Gel His-tag w/ anti-His (C-term) Stain antibody and WesternBreeze® Chemiluminescent Kit BenchMark™ Fluorescent IEF Marker 3–10 NativeMark™ Unstained LC5928 39212-01 LC0725 NuPAGE® 4–12% Bis-Tris Gel w/ MES, visualized with UV transilluminator (2 sec exposure) pH 3–10 IEF Gel NativePAGE™ 4–16% Bis-Tris Gel Sensitive stains for total detection Life Technologies offers a number of staining reagents for total protein and posttranslationally modified proteins, including Coomassie™ G-250 stain, silver stain, and a suite of compatible and highly sensitive fluorescent stains that allow direct quantitation of differential phosphorylation and glycosylation patterns as well as total-protein expression from a single sample on the same gel. Use the table below to find the stain that’s right for your application. An overview of Novex® protein stains. Coomassie Fluor™ Orange Protein Gel Stain SimplyBlue™ SafeStain SilverQuest™ Silver Staining Kit SYPRO® Ruby Protein Gel Stain Type of stain Colorimetric; ready-to-use colloidal Coomassie™ G-250 Colorimetric; ready-to-use silver Fluorescent; ready-to-use Fluorescent; ready-to-use Instrumentation required No No UV transilluminator, blue-light box, or laser scanner UV transilluminator, blue-light box, or laser scanner Sensitivity >7 ng BSA Subnanogram Subnanogram 4–8 ng Background Low Low Low Low Linear dynamic range 7–70 ng 1–10 ng 0.25–1,000 ng 4–1,000 ng Multiplex capability No No Yes No For densitometry Yes Not recommended Integration of fluorescent signal Integration of fluorescent signal MS compatibility Yes Yes Yes Yes Staining membranes PVDF No Use SYPRO® Ruby Protein Blot Stain No Total staining/ destaining time 3 hr; 12 min with microwave protocol 90 min; <60 min with microwave protocol 90 min (mini gels with new protocol); overnight for largeformat gels 30–60 min Protocol summary Rinse, stain, water-based destain 10 solution changes Fix, stain, and wash Fix and stain in one step Cat. No. LC6060, LC6065 LC6070 S12001, S12000, S21900 C33250, C33251 Ultrasensitive fluorescent detection of total protein SYPRO® Ruby Protein Gel Stain ǩ Simple staining procedure ǩ Linear quantitation range of 3 orders of magnitude ǩ Linear compatibility with mass spectrometry and microsequencing SYPRO® Ruby Protein Gel Stain is a highly sensitive fluorescent stain for proteins in 1D or 2D gels (Figure 5). The fast microwave mini gel protocol yields optimal results, typically in only 90 minutes. For convenience, SYPRO® Ruby stain is provided ready to use and stores at room temperature. Figure 5. Sensitive fluorescent staining with SYPRO® Ruby Protein Gel Stain. 13 Fast, sensitive, and safe Coomassie™ staining with SimplyBlue™ SafeStain SimplyBlue™ SafeStain is a uniquely formulated, readyto-use Coomassie™ G-250 stain specifically designed for fast, sensitive, and safe protein staining. With SimplyBlue™ SafeStain, bands develop in minutes using the rapid microwave protocol, and as little as 7 ng of protein can be detected (Figure 6). SimplyBlue™ SafeStain is completely nonhazardous and does not require acid/alcohol fixative or destaining. SimplyBlue™ SafeStain is compatible with mass spectrometry. Figure 6. Sensitive staining with SimplyBlue™ SafeStain. Mass spectrometry–compatible SilverQuest™ Silver Staining Kit The SilverQuest™ Silver Staining Kit provides silver staining sensitivity with minimal protein modification for optimal mass spectrometry results. SilverQuest™ stain allows detection of as little as 0.3 ng of protein (Figure 7), typically in less than 90 minutes. The optimized microwave procedure yields results in less than 30 minutes. Product Figure 7. Subnanogram sensitivity with the SilverQuest™ Silver Staining Kit. Quantity Cat. No. 1L LC6060 3.5 L LC6065 1 kit LC6070 200 mL S12001 1L S12000 5L S21900 1L C33250 5L C33251 1 kit P33300 1 kit P21857 Protein stains SimplyBlue™ SafeStain ™ SilverQuest Silver Staining Kit ® SYPRO Ruby Protein Gel Stain ™ Coomassie Fluor Orange Protein Gel Stain Pro-Q® Diamond Phosphoprotein Gel Staining Kit ® Pro-Q Emerald 300 Glycoprotein Staining Kit 14 Efficient protein transfer for successful western blotting A ® iBlot 7-Minute Blotting System 1 B 2 3 4 5 6 7 8 9 10 11 12 1 2 3 4 5 6 7 8 9 10 11 12 ǩ Complete transfer in 7 minutes or less ǩ High blotting efficiency and evenness ǩ Increased blotting reliability and reproducibility The iBlot® 7-Minute Blotting System is designed to efficiently and reliably blots proteins from polyacrylamide gels in 7 minutes or less, without the need for buffers or an external power supply. A self-contained unit (Figure 9), the iBlot® device uses disposable blotting stacks with integrated nitrocellulose or PVDF transfer membranes, offering the convenience of a bufferless, plug-and-play system. In addition to ease and convenience, the iBlot® system offers high-efficiency protein transfers (Figure 8) for high downstream detection sensitivities—in many cases, higher than conventional methods. In the end, you can achieve more accurate detection using less sample. Figure 8. High transfer efficiencies achieved using the iBlot® 7-Minute Blotting System. (A) iBlot® dry transfer to nitrocellulose and (B) semi-dry transfer to nitrocellulose of NuPAGE® 12% Bis-Tris Mini Gels. Lanes 1–6: 0.0625 µg, 0.125 µg, 0.25 µg, 0.5 µg, 1.0 µg, and 2.0 µg of SW480 human colon cancer cell lysate (Alexis) (control); lanes 7 and 12: 5 µL SeeBlue® Plus2 Pre-stained Protein Standard; lanes 8–11: 0.5 µL, 1.0 µL, 2.0 µL, and 4.0 µL of MagicMark™ XP Western Protein Standard. The iBlot® 7-Minute Blotting System is designed to work with multiple polyacrylamide gel sizes, including the midi size, fitting midi gels (8 x 13 cm) and E-PAGE™ 48 and 96 gels, and mini gels (8 x 8 cm). Precut blotting membranes Simplify blotting setup with precut membranes/filter-paper sandwiches. Life Technologies makes blotting easier by providing a variety of precut, preassembled membrane/filter-paper sandwiches for mini and midi/E-PAGE™ gels (Figure 10). A protein’s properties (i.e., charge, hydrophobicity, etc.) affect its ability to bind to membrane surfaces. Finding the right membrane may require experimenting with your specific protein on different membranes. For more information about Life Technologies western analysis products, go to lifetechnologies.com/iblot Figure 9. The iBlot® 7-Minute Blotting System. 1 2 3 A 4 1 2 3 4 B Invitrolon™ PVDF Other 0.45 µm PVDF Figure 10. High signal achieved on Invitrolon™ PVDF. A 53 kDa protein containing a c-myc epitope was transferred to (A) Invitrolon™ PVDF and (B) another manufacturer’s 0.45 µm PVDF membrane. Both PVDF membranes were probed with a 1:500 dilution of mouse anti-myc antibody, then developed with the WesternBreeze™ Chemiluminescent Anti-Mouse Kit. Blots shown here are 2 min exposures on X-ray film. Lanes 1–4: 2 ng, 1 ng, 0.5 ng, and 0.2 ng of protein. 15 Product Quantity Cat. No. 1 unit IB1001 1 unit IB1001EU 1 unit IB1001UK iBlot Transfer Stack, Regular (Nitrocellulose) 10 sets/box IB3010-01 iBlot® Transfer Stack, Mini (Nitrocellulose)† 10 sets/box IB3010-02 10 sets/box IB4010-01 iBlot Transfer Stack PVDF, Mini 10 sets/box IB4010-02 Blotting Roller, 8.6 cm wide 1 unit LC2100 Incubation Tray, 10 x 14 x 3 cm (L x W x D) 8 trays and lids/pkg LC2102 Semi-Dry Blotter 1 unit SD1000 Blotting Filter Papers, 2.5 mm thickness, 8.6 x 13.5 cm 50 filter papers LC2008 Blotting Filter Papers, 2.5 mm thickness, 7.5 x 8.4 cm 50 filter papers LC2010 20 sets/pkg LC2002 Invitrolon PVDF/Filter Paper Sandwich, 0.45 µm pore size, 8.5 x 13.5 cm 16 sets/pkg LC2007 Nitrocellulose/Filter Paper Sandwich, 0.45 µm pore size, 8.5 x 13.5 cm 16 sets/pkg LC2006 Nitrocellulose/Filter Paper Sandwich, 0.2 µm pore size, 8.5 x 13.5 cm 16 sets/pkg LC2009 1 kit BN3001 Western blotting Dry electroblotting iBlot® Gel Transfer Device ® iBlot Gel Transfer Device (EU) ® iBlot Gel Transfer Device (UK) ® † ® † iBlot Transfer Stack PVDF, Regular ® † Efficient semi-dry blotting ™ Invitrolon PVDF/Filter Paper Sandwich, 0.45 µm pore size, 8.3 x 7.3 cm ™ ™ ® NativePure Lentiviral Gateway Vector Kit Precut blotting membranes Product Applications Size No. of membrane/filterpaper sandwiches Cat. No. Nitrocellulose, 0.2 µm pore size Western transfers, solid-phase assay systems, amino acid analysis 8.3 x 7.3 cm (mini) 20 LC2000 8.5 x 13.5 cm (midi) 16 LC2009 8.3 x 7.3 cm (mini) 20 LC2001 8.5 x 13.5 cm(midi) 16 LC2006 8.3 x 7.3 cm (mini) 20 LC2005 8.5 x 13.5 cm (midi) 16 LC2007 Nitrocellulose, 0.45 µm pore size ™ Invitrolon PVDF, 0.45 µm pore size † Western transfers, solid-phase assay systems, amino acid analysis Western transfers, solid-phase assay systems, amino acid analysis, reprobing PVDF, 0.2 µm pore size Western transfers, solid-phase assay systems, amino acid analysis, reprobing 8.3 x 7.3 cm (mini) 20 LC2002 Nylon, 0.45 µm pore size Southern, northern, and western transfers, solid-phase immobilization, dry chemistry test strips, enzyme immobilization, gene probe assays 8.3 x 7.3 cm (mini) 20 LC2003 Each iBlot® bottom stack includes an integrated 0.2 μm nitrocellulose or polyvinylidene difluoride (PVDF) membrane for protein immobilization. 16 ® BenchPro 4100 Western Processing System Just push “run” and walk away ǩ Reduces tedious hands-on work and human errors ǩ Minimizes cross-contamination, and no clean-up ǩ Automate without protocol changes ǩ Compatible with all chemiluminescent, chromogenic, and fluorescent immunodetection reagents and protocols The BenchPro® 4100 Western Processing System (Figure 11) helps consistently and accurately deliver the correct volumes of solutions to the membrane at precise times. This automation removes the tedious and repetitive liquid handling steps associated with manual western blot processing. Western blots processed using the BenchPro® 4100 system minimize human processing errors, so you get greater experimental reproducibility and data consistency. The BenchPro® 4100 Western Processing System is designed to generate familiar results the first time and consistent results on subsequent runs. It is compatible with all chemiluminescent, chromogenic, and fluorescent immunodetection reagents and protocols (Figure 12). The BenchPro® 4100 system dramatically reduces the need for protocol optimization and allows you to perform immunoblotting your way, right away. For more information, go to lifetechnologies.com /benchpro4100 1 2 3 4 A Figure 11. BenchPro® 4100 Western Processing System. Product Cat. No. 1 each WP0001 BenchPro 4100 Western Card 10 cards WP1001 BenchPro® 4100 Reagent Vials 50 vials WP3001 ® 2 3 4 Figure 12. Manual processing vs. BenchPro® 4100 processing of western blots. (A) Manual processing; (B) BenchPro® 4100 system processing. Lane 1: 8 µL of a 1:10 dilution of MagicMark™ XP Standard; lane 2: 50 ng BSA; lane 3: 25 ng BSA; lane 4: 10 ng BSA. Proteins were detected using rabbit anti-BSA antibody and WesternBreeze™ Chemiluminescent Kit—Anti-Rabbit. Detection substrate was added to both membranes, and the blots were imaged at the same time. Quantity BenchPro® 4100 Card Processing Station 1 B 17 ® Novex western blot detection kits Life Technologies offers a broad range of reagents and kits for western blot detection. Whether you are using chromogenic, fluorescent, or chemiluminescence detection systems, we have the solutions you need. iBlot® Western Detection Kits ǩ Fast—complete western detection, typically in less than 25 minutes when used with the iBlot® 7-Minute Blotting System ǩ Flexible—works with mini and midi gels ǩ Easy optimization—allows the use of different conditions for different sections of the blot The iBlot® Western Detection Kits (Figure 13) consist of iBlot® detection stacks and iBlot® detection reagents. The kits are available with anti-mouse or anti-rabbit secondary antibodies and are compatible with chemiluminescent and chromogenic detection. The iBlot® Western Detection Kits offer comparable or better sensitivity than the conventional protocols for the majority of the antibody-antigen pairs, while offering significant time savings. 1 2 3 4 5 A 1 2 3 B 4 5 Figure 13. Comparison of an iBlot® Western Detection Kit to a WesternBreeze™ kit. Proteins from an SW480 (human colon adenocarcinoma cell line) lysate were transferred using the iBlot® 7-Minute Blotting System. Mouse anti-p53 antibody was used as the primary antibody. Detection was performed with (A) the WesternBreeze™ Chemiluminescent Kit—Anti-Mouse or (B) the iBlot® Western Detection, Chemiluminescent Kit (Anti-Mouse). The iBlot® western detection kit detected the proteins with sensitivity comparable to the WesternBreeze™ kit. Product Quantity Cat. No. iBlot® Gel Transfer Device 1 device IB1001 ® 10 reactions IB7110-01 ® iBlot Western Detection Chemiluminescent Kit (Anti-Mouse)—Mini, 10 Pak 10 reactions IB7110-02 iBlot® Western Detection Chemiluminescent Kit (Anti-Rabbit)—Regular, 10 Pak 10 reactions IB7210-01 iBlot® Western Detection Chemiluminescent Kit (Anti–Rabbit)—Mini, 10 Pak iBlot Western Detection Chemiluminescent Kit (Anti-Mouse)—Regular, 10 Pak 10 reactions IB7210-02 ® 10 reactions IB7310-01 ® 10 reactions IB7310-02 ® 10 reactions IB7410-01 ® 10 reactions IB7410-02 ® 10 reactions IB7010-01 ® 10 reactions IB6310-02 iBlot Western Detection Chromogenic Kit (Anti-Mouse)—Regular, 10 Pak iBlot Western Detection Chromogenic Kit (Anti-Mouse)—Mini, 10 Pak iBlot Western Detection Chromogenic Kit (Anti-Rabbit)—Regular, 10 Pak iBlot Western Detection Chromogenic Kit (Anti–Rabbit)—Mini, 10 Pak IBlot Western Detection Stacks (Regular), 10 Pak iBlot Western Detection Stacks (Mini), 10 Pak 18 Additional Novex® western detection kits WesternBreeze™ Chromogenic Kit Product Strong, long-lasting signal Application WesternBreeze™ Chemiluminescent Kit ECL Chemiluminescent Kit Highly sensitive detection ® WesternDot™ Blotting Kit Using horseradish Straightforward, high- with ready-to-use BCIP/ with ready-to-use CDP-Star peroxidase, low-picogram sensitivity detection of NBT substrate for alkaline chemiluminescent substrate levels of substrate can proteins using fluorescent phosphatase for alkaline phosphatase be detected with the ECL Qdot® 625 nanocrystals Chemiluminescent Kit combined with high-affinity streptavidin-biotin binding reaction Sensitivity Low-picogram High-femtogram High-femtogram Low-picogram Emission duration Months to years Days Hours Days to months Additional equipment required None Optional: Autorad/x-ray film and Autorad/X-ray film and UV transilluminator or white-light camera or developer developer UV illuminator scanner Scanner Scanner Digital camera with orange/ Luminescent imager Luminescent imager red filter Laser scanner Product Quantity Cat. No. Chromogenic and chemiluminescent immunodetection WesternBreeze™ Chromogenic Kit—Anti-Mouse 1 kit WB7103 ™ 1 kit WB7105 ™ WesternBreeze Chromogenic Kit—Anti-Goat 1 kit WB7107 WesternBreeze™ Chemiluminescent Kit—Anti-Mouse 1 kit WB7104 WesternBreeze™ Chemiluminescent Kit—Anti-Rabbit WesternBreeze Chromogenic Kit—Anti-Rabbit 1 kit WB7106 ™ 1 kit WB7108 ™ 80 mL each WB7050 ™ 2 x 100 mL WB7003 250 µL LC5602 1 kit WP20005 1 kit W10132 1 kit W10142 WesternBreeze Chemiluminescent Kit—Anti-Goat WesternBreeze Blocker/Diluent (part A and B) WesternBreeze Wash Solution (16X) Easy molecular weight estimation directly on western blots MagicMark™ XP Western Protein Standard ® Novex ECL Chemiluminescent Kits ™ WesternDot Blotting Kit WesternDot™ 625 Goat Anti-Mouse Western Blot Kit ™ WesternDot 625 Goat Anti-Rabbit Western Blot Kit 19 To learn more about the complete protein separation, blotting, and detection solutions provided in Novex® protein analysis systems, go to lifetechnologies.com/novex For research use only. 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