When we hear about DNA we immediately think of chromosomes in the nuclei of most cells of plants and animals. These chromosomes carry the vast bulk of the genetic information that an organism has inherited from both parents. We humans have 46 chromosomes in each nucleus (except in our sex cells) - i.e. 23 from our father and 23 from our mother. Thus, nuclear inheritance passes on genetic material from both parents. itochondria are found in the cytoplasm of every cell - they are tiny structures where respiration occurs i.e. where the energy is released from our food. The number of mitochondria in each cell varies (from hundreds to thousands), as the more energy a cell needs the more mitochondria will be found in that cell. Muscle cells have a large number of mitochondria as lots of energy is needed for muscle action and liver cells, too, have thousands of mitochondria Mitochondria are found in the cytoplasm of cells in animals, plants and fungi. M Every mitochondrion contains some DNA - a small amount (relative to the amount of DNA in the nucleus) 16,569 base pairs or 39 genes. It is called mitochondrial DNA (mtDNA). These 39 genes code for some of the enzymes and other materials (e.g. RNA) that are required for the process of respiration. So, mutations in the mtDNA may lead to mitochondrial disorders (see page 2). The human mitochondrial genome was fully sequenced in the 1990s. All mtDNA is a double stranded circular molecule, not unlike a plasmid in a bacterial cell. Each mitochondrion contains between two and ten copies of this circular molecule. This means that a cell with, for example, a thousand mitochondria could have ten thousand copies of the mtDNA molecule whereas there will only be two copies of the nuclear DNA in the same cell. This great abundance of mtDNA in a cell has great significance for forensic studies as mitochondrial DNA can therefore be obtained from smaller samples of tissue than are needed for the isolation of nuclear DNA (see page 3). Where does our mtDNA come from?? Sperm cell - has a nucleus (in the head) with 23 chromosomes, a middle piece and a tail. The sperm has mitochondria (estimated at 100) concentrated at the base of the tail to supply the sperm with energy to swim to the egg. Egg cell - has a nucleus with 23 chromosomes and cytoplasm with mitochondria (estimated at about 100,000) At fertilisation the sperm enters the egg and the nuclei fuse (resulting in the 46 chromosomes), the mid-piece and the tail of the sperm are destroyed (together with the male mitochondria). The cytoplasm of the zygote is supplied by the egg cell as the sperm cell had very little cytoplasm. Thus the mitochondria in the fertilised egg are all from the mother - so we inherit all of our mtDNA from our mother. Each of us (male and female) has the same mtDNA as our mother (see pedigree charts on pages 3 and 4). When was cytoplasmic DNA discovered?? In the early 1960s a number of experiments showed that mitochondria always arose from the existing mitochondria in the cytoplasm - they were self replicating. This lead researchers to investigate how this could happen and by the end of the decade it was clear that mitochondria had their own DNA (known as mtDNA). About the same time, chloroplasts too, were found to contain their own DNA (known as cpDNA). This information sheet contains both prescriptive and non-prescriptive material. Leaving Certificate Biology H. 2.5.13 Non-nuclear inheritance e.g. mitochondrial and chloroplast DNA Higher Level Extension Students need to know about the existence of DNA in non-nuclear components of a cell e.g. mitochondrial DNA and chloroplast DNA Syllabus (page 25) and Guidelines for Teachers (page 44 ) Contents Page Syllabus requirements 1 Mitochondrial DNA 1 Origin of our mtDNA 1 Discovery of mtDNA 1 Disease and mtDNA 2 mtDNA and forensics 3 Endosymbiont Hypothesis 4 Could it all be wrong 4 Chloroplast DNA 4 Ideas for the Classroom 4 Page 1 T he history of mitochondrial DNA and disease goes back to the 1960s. In Sweden, a patient was described by a scientist called Luft: he studied the patient who ate voraciously, yet stayed thin, sweating profusely even in winter. The scientists involved in the research showed that the patients muscle mitochondria could only make a fraction of the energy that they should normally produce; the unconverted fuel was diverted into heat production. The exact cause of Luft disease, (only one other case was identified), remains unknown but the scientists had broken new ground by linking mitochondrial defects to human disease. Research continued and by the late 1980s quite a few mtDNA-linked disease were described. Disease and mtDNA I magine your body if half of its energy releasing facilities were shut down, an energy crisis would develop - your brain would be impaired, your vision would be dim, your muscles would twitch spastically or would be too weak to walk or write and your heart would be weakened. It is the tissues with high demands for energy e.g. muscle, heart, brain that are particularly vulnerable to mitochondrial defects. Some of the more lethal poisons, including the cyanides, also act by blocking mitochondrial biochemical pathways and that is why they are so deadly. A lso because the respiratory pathway is disrupted at some point all the biochemical steps before the point where the problem is become backed up - often leading to abnormal chemistry that produces toxic by-products e.g. lactic acid which is often found in the blood of patients with mitochondrial disease. I nheritance of these diseases, caused by mutations in mtDNA, does not follow any Mendelian rules. The only rules that can be counted on are that a father can’t pass on his mtDNA mutations and a mother will pass on her mtDNA mutations to 100% of her children. P atients with these mtDNArelated diseases usually have a mixture of normal and mutant mtDNA - a condition known as heteroplasmy. A tissue with 20% mutant mtDNA suffers different effects than a tissue with 90% mutant mtDNA., hence the varying severity of such a disease within a family. E ven though all of a woman’s children will inherit her mtDNA mutations, that does not make it easy to predict how severe the disease will be in each child. This is because the ratio of mutant to normal mtDNA passed from The pedigree table to the right shows the inheritance of a disease cau sed by a mu tation in mitochondrial DNA. The three affected individuals in the first generation must have had an affected mother (not shown). 1. Affected males do not transmit the trait to any of their children 2. Affected females transmit the trait to all of their children. It dies out if a woman has • no children, or • all male children Unaffected male Affected male This information sheet contains both prescriptive and non-prescriptive material. mother to child can vary dramatically. Because the mother passes her mitochondria (with normal and mutated mtDNA) randomly to all her egg cells, each zygote produced will receive a different amount of mutated mtDNA. A mother with, perhaps, a mild form of a mitochondrial disease may give birth to one child with a very severe disease and a second child with no disease symptoms at all. D iseases that have been linked to mutated mtDNA MIDD - maternally inherited diabetes with deafness. NARP - a disease with muscle weakness, wobbliness and retinal disorder. MELAS - headaches, visual and hearing loss, exercise intolerance and elevated lactic acid in the blood. There are many others being identified every year and to date almo st 5 0 d i se a se - cau s in g mutations have been described. A ging and mtDNA - the aging process is now also thought be linked to deletions in mtDNA. Small amounts of this mutated mtDNA are found in normal elderly patients and such deletions increase exponentially in long-lived tissues e.g. muscle and brain. Could mutated mtDNA have a role in Alzheimer’s or Parkinson’s diseases?? The ‘mitochondrial theory of aging’ proposed many years ago might now have the beginnings of some experimental support. Unaffected female Affected female Page 2 : Grandfather Grandmother Uncle Mother Father Victim Sister Brother-in-law Nephew Aunt Sister Cousin Second cousin Niece Niece Second cousin " ! ! ! ! ! ! ! ! ! " # $ . % # ! 45 ! " ! % &"622 ! 45 ! # " ! ! &''& ( ! # # ! * ! * * # # + !-( ! ) ! , ! # 7 . 3 ! &'9) # ! ". ! 7 ! * ! " / 5 ! 8 ! 04 " 5 ! ! " . ! + . ! ! # . / !, ! 0 ! ! ! ! ! &1"2223 . 122 This information sheet contains both prescriptive and non-prescriptive material. % / "( / . / / ! 5 ! . Page 3 !" # % &## ' ) -. # # $ $ # # # # ( * + / % 0 & ) , % 1 2 % % Origin of mitochondria The endosymbiont hypothesis proposes that early in evolution, an energy-poor cell engulfed a bacterium with far more energy-efficient material and ultimately co-opted its functions. Over time the bacteria evolved into mitochondria. Endosymbiosis was probably critical for the development of large multicellular organisms including us. Mitochondria were first recognised as an important subcellular organelle by Altmann in 1890. He called them ‘bioblasts’ and suggested that they might be tiny independent organisms within eukaryotic cells. Altmann was not as wrong as biologists once believed, as researchers now suggest that mitochondria are the descendents of ancient prokaryotes that took up residence in eukaryotic cells and provided them with the ability to oxidise food products and release ATP. Could it all be wrong?? Mitochondria may not only be inherited through the maternal line, according to new research, published August 2002, that promises to overturn accepted biological wisdom. Schwartz and Vissing from Copenhagen have discovered that one of their patients inherited the majority of his mitochondria from his father. Mitochondria in the sperm from the father were presumed to be destroyed immediately after fertilisation, leaving behind only those from the mother. The two researchers made the discovery while trying to discover why one of their patients suffered extreme fatigue during exercise. The 28-year old man had normal heart and lungs and although his muscles appeared healthy they noticed that his muscles absorbed very little oxygen. When the examined the genetic sequence of his mtDNA they discovered 2 mutations - one of which was responsible for his extreme fatigue. To investigate the mutations further they also sequenced the mtDNA of his mother, father and uncle. To their surprise, the sequence matched those of the patient’s father and uncle. Muscle biopsies showed that about 90% of his mitochondria came from his father. However, the mitochondria in his blood, hair roots and fibroblasts came from his mother. The 2 mutations appear to have arisen spontaneously during or shortly after fertilisation. A few other papers were published also suggesting that mtDNA could be sometimes inherited from fathers, however, most of them have since been disputed and it is claimed that they were based on incorrect data. The researchers think that inheritance of paternal mitochondria is probably very rare, however, if confirmed by other researchers, the findings could have huge implications for evolutionary biology and biochemistry. Chloroplast DNA (cpDNA) Chloroplasts in plant photosynthetic tissue also have their own DNA - it has the same type structure as mtDNA i.e. a circular molecule and each chloroplast contains quite a few copies of this cpDNA. Chloroplast DNA tends to have more base pairs than mtDNA - ranging from 120,000 - 200,000 base pairs. This DNA codes for some of the proteins required to make the pigments in a plant cell. Mutations in the cpDNA genes can cause leaf colour variation e.g. in Mirabilis jalapa (Four-o’clock plant) where a defective gene fails to produce chlorophyll resulting in white leaves. The inheritance of this gene is maternal which was the clue that led researchers to locate the gene in the chloroplast. Unlike mtDNA, which is thought to be always inherited maternally, cpDNA is sometimes inherited paternally e.g. in the conifers. However, cpDNA is most often inherited maternally e.g. in the angiosperms. This information sheet contains both prescriptive and non-prescriptive material. Page 4