O’Neil Organic Reactions Winter 2013 Chemistry 425b: Organic Reactions Dr. Gregory O’Neil Department of Chemistry Western Washington University 1 O’Neil Organic Reactions Winter 2013 - Meyers, A. “Chemistry 215 Handouts,” available at: http://www.chem.harvard.edu/groups/myers/page8/pag e8.html Preface This text/workbook was designed to accompany a onequarter advanced undergraduate chemistry elective. Presentations of topics are by no means a complete treatise on the subject. Rather, these provide an entry point to core principles governing organic reactions. Selected examples are given to highlight these reactions in the context of complex molecule synthesis. An effort has been made to provide students with references that encourage further reading on a given topic. The text is divided roughly into two halves (see Table of Contents), beginning with a more detailed analysis of reactions that should be familiar to students that have completed sophomore organic chemistry. Topics discussed include FMO- and conformational analysis. This then is followed by more synthesisoriented subjects including fundamental reactions like oxidations and reductions plus more specialized topics like selectivity models for carbonyl additions and methods for alkene synthesis. It is the intention of the author to supplement this text with information on special topics that include protecting groups and palladium-catalyzed cross-coupling reactions. Significant inspiration was gained from the following sources: - - Boger, D. “Modern Organic Synthesis, Lecture Notes,” TSRI Press, La Jolla, CA. Evans, D. “Chemistry 206: Advanced Organic Chemistry,” available at: http://isites.harvard.edu/icb/icb.do?keyword=k7863 Phillips, A. “Chem 5311, Advanced Synthetic Organic Chemistry I”, Univ. Colorado, Boulder, 2006. Gregory O’Neil, November 29,2012. Table of Contents Chapter Page 1. Principles of Organic Reactions 3 2. Conformational Analysis 18 3. Kinetics and Thermodynamics 24 4. Pericyclic Reactions 31 5. Oxidation Reactions 46 6. Reactions at the Carbonyl 56 7. Alkene Synthesis 71 8. Alkene Metathesis 77 2 O’Neil Organic Reactions Ch. 1 What do we need to know to understand, predict, and design organic reactions? Methodology: An organic chemist’s toolkit. Retrosynthesis: A strategy for analyzing complex problems. Winter 2013 Classes of Mechanisms Three general types: a) Polar Movement of PAIRED electrons Mechanism: A framework for predicting and understanding the products and stereochemistry of a reaction Mechanism Basics Notation: b) Free radical Movement of UNPAIRED electrons 3 O’Neil Organic Reactions c) Pericyclic Movement of electrons within a closed ring (there are no intermediates, ions or radical species) Universal Effects Governing Chemical Reactions: Steric Effects – Nonbonding interactions (Van Der Waals repulsion) between substituents within a molecule or between reacting molecules. Electronic Effects (Inductive Effects) – The effect of bond and through-space polarization by heteroatom substituents on reaction rates and selectivities. Pericyclic reactions can be subdivided into 4 categories: i. ii. Winter 2013 Cycloadditions Electrocyclic Reactions Rate decreases as R becomes more electronegative iii. Sigmatropic rearrangements iv. Group Transfer reactions Stereoelectronic Effects – Geometrical constraints placed upon ground and transition states by orbital overlap considerations. 4 O’Neil Organic Reactions Steric vs. Electronic Effects: Case studies when steric and electronic effects lead to differing stereochemical outcomes: Woerpel et al., J. Am. Chem. Soc. 1999, 121, 12208 Winter 2013 MO Theory: The H2 Molecule (revisited) Let’s combine two hydrogen atoms to form H2. Rule 1: A linear combination of n atomic orbitals (AOs) will create n Molecular Orbitals (MOs). O (Bu)2CuLi O EtO2C Bu EtO2C OR What happens when you add two electrons to the MO diagram above? How about four electrons? O OR EtO2C Bu3Al O Bu EtO2C Bu Bu Al OR Bu Yakura et al., Tetrahedron 2000, 56, 7715 OR Rule 2: Each MO is constructed by taking a linear combination of the individual atomic orbitals: Bonding MO σ = C1ψ1 + C2 ψ2 Antibonding MO σ* = (C1*)ψ1 + (C2*) ψ2 The coefficients C1 and C2 represent the contribution of each AO. The squares of the C-values are a measure of the electron density on the atoms in question. 5 O’Neil Organic Reactions Rule 3: Both wave functions must contribute one net orbital. Consider the C-O pi-bond of acetone. Winter 2013 Chemical Bonding Bond strengths (Bond Dissociation Energies) are composed of a covalent (δ Ecov) and ionic contribution ((δ Ecov). As two molecules collide: a) The occupied orbitals of one molecule repel the occupied orbitals of the other. b) Any positive charge on one attracts negative charge on the other. c) The occupied orbitals of each interact with the unoccupied orbitals of the other. Overlap between orbitals is most effective for orbitals of similar size and energy (Frontier Molecular Orbital Theory). In the ground state, pi C-O is polarized toward oxygen. Note that the antibonding orbital is polarized in the opposite direction (Rule 3) What does this mean in terms of reactivity? 6 O’Neil Organic Reactions Consider Group IV elements Carbon and Silicon: Winter 2013 Case 1: Anti nonbonding electron pair and C-X bond. Compare anti (favored) vs. syn (disfavored) E2 eliminations. Case 2: Two anti sigma bonds. Weak bonds have corresponding low-lying antibonding orbitals. Orbital orientation greatly affects the strength of the interaction. 7 O’Neil Organic Reactions Winter 2013 The interaction of a vicinal bonding orbital with a porbital is referred to as hyperconjugation. Donor Acceptor Properties Consider the energy levels for both bonding and antibonding orbitals: Stereoelectronic requirement: Syn-planar orientation between interacting orbitals. MO Description: C-R H H The greater electronegativity of oxygen lowers both the bonding and antibonding C-O states. Hence: H H C-R σ C-C is a better donor orbital that σ C-O σ* C-O is a better acceptor orbital than σ* C-C Hierarchy of Donor Acceptors: The new occupied orbital is lower in energy. When you stabilize the electrons in a system, you stabilize the system as a whole. 8 O’Neil Organic Reactions Consider the following X-ray structures of adamantine. Winter 2013 Delocalization of nonbonding electrons into vicinal antibonding orbitals is also possible. Bonds participating in hyperconjugation (e.g C-R) will be lengthened while the C(+)-C bond will be shortened. M.O Description T. Laube, Angew. Chem. I. E. 1986, 25, 349. As the antibonding C-Y orbital energy decreases, the magnitude of this interaction will increase. Note that σ C-Y is slightly destabilized. 9 O’Neil Organic Reactions Since nonbonding electrons prefer hybrid orbitals, this orbital can adopt either a syn or anti to the vicinal C-Y bond. Winter 2013 Example: N2F2 This molecule can exist as either cis or trans. Which is preferred? Syn Orientation Orbital Interactions: M.O Description Anti Orientation Electrostatic Interactions (Dipole)? Overlap is better in the anti orientation. 10 O’Neil Organic Reactions Anomeric Effect A methoxy substituent on a cyclohexane ring prefers to adopt the equatorial conformation. Winter 2013 Other electronegative atoms such as Cl, SR, etc. also participate in anomeric stabilization. Why is the axial C-Cl bond longer? Whereas the closely related 2-methoxytetrahydropyran prefers the axial conformation. There is also a rotational bias on the exocyclic C-OR bond. The effect that provides the stabilization which overrides the inherent steric bias is referred to as the anomeric effect. Principle HOMO-LUMO interaction: 11 O’Neil Organic Reactions Spectroscopic Evidence Winter 2013 Rationalize why B is more stable than A. Can you explain the following IR trends? Katritsky, J. Chem. Soc. B 1970, 135. Compare the C-H stretching frequency for an aldehyde and related alkene. Carboxylic Acids and Esters Conformations: There are two planar conformations. Specific Case: Methyl Formate. The N-H stretching frequency of cis-methyl diazene is 200 cm-1 lower than the trans isomer. Me H N N N-H = 2188 cm-1 Me N N H N-H = 2317 cm-1 The (E) conformation of both acids and esters is less stable by 35 kcal/mol. Sterics would predict that the (E) conformer of methyl formate would be preferred (H smaller than O). Since this is not the case, electronics must be considered. N.C Craig & coworkers J. Am. Chem. Soc. 1979, 101, 2480. 12 O’Neil Organic Reactions Conjugation and Hybridization Winter 2013 Esters vs. Lactones Note that the alkyl oxygen is sp2 hybridized in order to allow for conjugation (resonance). Esters prefer to adopt the (Z) conformation while small ring lactones are constrained in the (E) conformation. Explain the following: 1. Lactone 2 is significantly more susceptible to nucleophilic attack at the carbonyl carbon than 1. 2. The pKa of 2 is 25 while ester 1 is 30. Reactions Peracid epoxidation of alkenes. Hyperconjugation (Z) Conformer: Identify the important orbital interactions. (E) Conformer: 13 O’Neil Organic Reactions How important is the trajectory of approach for reacting molecules? Baeyer-Villiger reaction. Can you rationalize the rate date below? (Hint: Why is that the preferred intermediate?) O kR R O C R Me O R C + Me CF3CO3H R RS sp3 hybridized: SN2 displacement. kR / kMe CH3CH2 72 (CH3)2CH 150 (CH3)3C 830 C O Me OH O RL O kMe via Winter 2013 CF3 O where RL = large substituent RS = small substituent O Tether Nu and X Eschenmoser Helv. Chim. Acta 1970, 53, 2059. 14 O’Neil Organic Reactions O O S O O CH3 S Nu: Nu O sp2 Hybridized: C=O and C=C. Some history: O CH3 OMe OMe OMe OMe O O S H C H Nu H N not 180° sealed tube, 48 h har sh O O SO3CH3 + (CH3)3N NH2-OH SO3- HO X exclusively intramolecular X Me N Me H H C S O I O N O O H Perkin J. Chem. Soc. 1916, 109, 815. 1. Led to the idea of a partial through-space bond between Nitrogen and the carbonyl. 2. Later, Brent proposed that X-ray structures of donoracceptor systems might represent the early stages of chemical reactions. (Chem. Rev. 1968, 68, 587) O Beak Acc. Chem. Res. 1992, 25, 215. OMe N O O King et al. Tet. Lett. 1982, 23, 4465. N O OMe Endocyclic Restriction Test (CH3)2N O MeI, MeOH intramolecular not possible O X O Winter 2013 N Burgi J. Am. Chem. Soc. 1973, 9515 5065. O’Neil Organic Reactions Required Trajectories: Summary Winter 2013 B. Endo-cyclization – The bond that is breaking is endocyclic to the forming ring. Baldwin J. Chem. Soc., Chem. Commun. 1976, 734. C. Ring Closures are classified according to hybridization of the electrophilic component and size of the ring formed. Examples: Baldwin’s Rules: Stereoelectronic Considerations for Ring-Closure. Baldwin’s Rules provide a qualitative set of generalizations on the probability of a given ring-closure. They do not apply to non-first-row elements or electrocyclic processes. Nomenclature: A. Exo-cyclization – The bond that is breaking is exocyclic to the forming ring. 16 O’Neil Organic Reactions Most exo cyclizations are allowed. Winter 2013 Case 2: Example: Formation of 3-membered rings: Some endo cyclizations are disallowed. Case 1: Case 3: 17 O’Neil Organic Reactions Conclusions 3 4 5 6 7 Tet EXO Trig Dig X X Tet X X X ENDO Trig X X X Winter 2013 The eclipsed conformer may be broken down into its individual destabilizing interactions. Dig Further reading: Structure Eclipsed Atoms ΔE (kcal mol-1) Ethane H H 1.0 Propane H H H CH3 1.0 1.4 FMO Analysis: Johnson, C. D. Acc. Chem. Res. 1993, 26, 476. Ch. 2 Conformational Analysis Reviews: Hoffmann, R. W. Angew. Chem. I. E. 2000, 39, 2054 Hoffmann, R. W. Chem. Rev. 1989, 89, 1841 Ethane and Propane 18 O’Neil Organic Reactions Butane Winter 2013 Pentane Me H Me H H H H H H H Me Me staggered eclipsed E=? Torsional Energy Diagram Heirarchy of Me – Me Interactions Can you calculate the magnitude of the Me H3C ca 3.1 – Me interaction? CH3 CH3 3.7 CH3 CH3 CH3 CH3 CH3 3.9 ~7.6 19 O’Neil Organic Reactions Consider the conformation of zincophorin: Winter 2013 Propylene (Propene) Torsional Strain: Can you identify the lowest/highest energy conformations? Allylic Strain: Propane vs. Propene 3-methyl-1-butene 2-Z-butene Hybridization changes the C-C-C bond angle. 20 O’Neil Organic Reactions Can the following selectivity: Winter 2013 Amides J. Am. Chem. Soc. 1979, 101, 259. This has important consequences for the enolate chemistry of amides: Allylic Strain: Definition Ketones and Aldehydes 21 O’Neil Organic Reactions Can you predict the stereochemical outcome of this reaction? Winter 2013 Cyclohexane Cyclic Systems A chair ring-flip interconverts axial and equatorial substituents: Strain Energy and Ring Size Substituted Cyclohexanes: 10 kcal/mol 8 Methylcyclohexane 6 4 2 0 3 4 5 6 7 8 Ring Size 22 O’Neil Organic Reactions Typical A Values (kcal/mol): FG Winter 2013 Stereoselective Reductions: A Value FG A Value F 0.25 OEt 0.9 Cl 0.6 CO2Et 1.15 Br 0.5 NH2 1.4 I 0.5 CH3 1.8 OH (in C6H6) 0.7 CH2CH3 1.9 OH (in i-PrOH) 0.9 CH(CH3)2 2.1 OCH3 0.75 C(CH3)3 4.9 Six-Membered Rings with Heteroatoms Note the difference between iPr and tBu A Values. Consider the following A-Values: Consider 3-methylcyclohexanone: 23 O’Neil Organic Reactions Note on axial vs. equatorial interconversion: To achieve a high ratio of products in a thermodynamically controlled reaction, you need the following ΔG’s (kcal/mol): Winter 2013 A values are additive K (25 °C) ΔG K (0 °C) 2 (67:33) 0.41 2.1 (68:32) 0.41 2.9 (75:25) 0.41 5 (83:17) 0.95 5.7 (85:15) 0.95 11.6 (92:8) 0.95 9 (90:10) 1.30 10.9 (92:18) 1.30 28.5 (97:3) 1.30 20 (95:5) 1.74 27.5 (96:4) 1.80 103.3 (99:1) 1.80 ΔG K (-78 °C) ΔG Consider the following hydrogenation reaction: Even though Cl has a very small A value, the energy of activation (Ea) is high (it must go through a half-chair conformation). Ch. 3 Kinetics and Thermodynamics of Organic Reactions Overall this reaction is exothermic (ΔG = -17 kcal/mol), so the reaction is favorable or spontaneous. An equilibrium can be described by: But experimentally this reaction is very slow, it takes about 2 x 104 years to hydrogenate one mole of ethylene (without a catalyst). 24 O’Neil Organic Reactions Winter 2013 Kinetic vs. Thermodynamic Control A transition state (TS) possesses a defined geometry and charge delocalization but has no finite existence. If this is an irreversible reaction, the major product will be B. If the reaction is reversible, C will be major (more stable product). Intra- versus Intermolecular Reactions Hammond Postulate The transition state most closely resembles the side (i.e reactant or product) to which it is closer in energy. Consider the solvolysis of tert-butyl chloride: Step 1: CH3 H3C MeOH Cl CH3 Intramolecular reactions have a far more favorable entropy of activation. Step 2: 25 O’Neil Organic Reactions Winter 2013 The transition states will resemble the geometry of the carbocation intermediate and not the reactant or product. Conformational Effects on Reactivity Ester Hydrolysis Oxidation 26 O’Neil Organic Reactions Substitution Reactions Which of the following SN2 reactions is faster? Winter 2013 Elimination Reactions Can you explain the following ratio of elimination products? Consider the E2 Elimination of: 27 O’Neil Organic Reactions Winter 2013 Epoxide Opening Under kinetically controlled conditions (irreversible), product ratios are dependent on Ea (ΔΔG‡). Consider the following: path (a) CH3 path (b) CH3 SPh CH3 (b) O O H O- H (a) H twist boat conformation 1,3-diaxial exclusive pr oduct SPh H Epoxide Opening CH3 SPh CH3 H OH H CH3 HO PhS H less stable product O- H chair conformation H H more stable product Atom under attack moves toward the nucleophile. Reactions that proceed via a ground state conformation are typically faster. 28 O’Neil Organic Reactions Rearrangements Winter 2013 From the previous example, how does the rate of conformer intercoversion effect the product distribution? There are two limiting cases to consider: a) The rate of reaction is much faster than interconversion i.e k3,k4 >> k1,k2 b) The rate of reaction is much slower than interconversion i.e k3,k4 << k1,k2 Case A: The two conformers cannot equilibrate during the reaction. The product ratio thus depends solely on the initial ratios of the two conformers (aka “Kinetic Quench”). Case B: The two conformers can equilibrate during the reaction. The product ratio depends on the difference in activation energies (Ea) leading to the respective products (“CurtinHammett conditions”). 29 O’Neil Organic Reactions Ch. 4 Pericyclic Reactions Winter 2013 Some things to consider: A pericyclic reaction is characterized as a change in bonding relationships that takes place as a continuous, concerted reorganization of electrons. The term "concerted" specifies that there is one single transition state and therefore no intermediates are involved in the process. To maintain continuous electron flow, pericyclic reactions occur through cyclic transition states. a. The number of electrons involved is important. More precisely: The cyclic transition state must correspond to an arrangement of the participating orbitals which has to maintain a bonding interaction between the reaction components throughout the course of the reaction. b. Pericyclic reactions are stereospecific Is it possible to predict the stereochemical outcome of this reaction? c. Reactions behave differently under conditions (i.e thermo- vs. photochemical) different Huisgen Tet. Lett. 1964, 3381. 30 O’Neil Organic Reactions We can explain and predict the outcome of pericyclic reactions using Frontier Molecular Orbital (FMO) theory (HOMO and LUMO interactions) and orbital symmetry. Winter 2013 Disrotatory Closure: For further reading see: Woodward, Hoffmann, The Conservation of Orbital Symmetry, Academic: New York, 1970. Fleming, Frontier Orbitals and Organic Chemical Reactions, John-Wiley and Sons, New York, 1976. Some Observations butadienes undergo conrotatory closure under thermal conditions hexatrienes undergo disrotatory closure under thermal conditions. Fukui, Acc. Chem. Res. 1971, 4, 57.; Angew. Chem. I. E. 1982, 21, 801. Some Classes of Pericyclic Reactions 1. Electrocyclic Ring Closure/Opening Ring closure (and hence opening) can occur in two distinct ways: Conrotatory Closure: 31 O’Neil Organic Reactions Under photochemical conditions 4 electron systems undergo disrotatory motion Winter 2013 FMO Analysis Butadiene π Molecular Orbital Diagram: while 6 electron systems undergo conrotatory motion. conrotation 4 π electron thermal reaction h Me Me Me Me 32 O’Neil Organic Reactions 6 π electron thermal reaction Winter 2013 4 π electron photochemical reaction Overall: No. π electrons 4n (n = 0,1…) 4n + 2 Thermal conrotatory disrotatory hν disrotatory conrotatory Photochemical Activation: When light is used to initiate an electrocyclic rxn, an electron is excited from Ψ2 to Ψ3. Treating Ψ3 as the HOMO now shows that disrotatory closure is allowed and conrotatory closure is forbidden. 2. [1,3]-Sigmatropic Rearrangements Consider the following H-Migration: ‡ H ion X Y H X H Y X Y ‡ H radical X Y 33 O’Neil Organic Reactions The hydrogen can move across the pi system in one of two ways. If hydrogen migrates on the same side of the system, it is said to migrate suprafacially with respect to that system. If hydrogen migrates from one side of the pi system to the other, it is said to migrate antarafacially. Winter 2013 The bridging distance is too great for the antarafacial migration. Hence, [1,3] hydrogen migrations are not observed under thermal conditions. Under photochemical conditions, the [1,3] rearrangement is allowed suprafacially. How would you predict this using FMO? What about a [1,5] Hydrogen Shift? FMO Analysis of Hydrogen Migration: 34 O’Neil Organic Reactions 3. [3,3]-Sigmatropic Rearrangements Winter 2013 The Cope rearrangement proceeds in a concerted manner via a chair transition state and requires no acid or base catalysis. Consider the following: Me Me Me Me E 99.7% Me The reaction can proceed via a chair or boat transition state Me Z Me Me Me E Me E 0.3% Can you explain the following product distribution? Some examples of [3,3]-Sigmatropic Rearrangements: a) Cope Rearrangement Doering Tetrahedron 1962, 18, 67. 35 O’Neil Organic Reactions Winter 2013 Mechanism: Applications Oxy-Cope Applications Evans and Golob showed that the oxy-Cope rearrangement could be greatly accelerated by deprotonation of the alcohol. J. Am. Chem. Soc. 1975, 97, 4765. Review: Paquette Tetrahedron 1997, 53, 13971. 36 O’Neil Organic Reactions b) Claisen Rearrangement Winter 2013 A general mechanism: Review: Wipf Comprehensive Organic Synthesis 1991 Vol. 5 pp 821-871. There are a number of important variants of this important reaction: Applications Aromatic Claisen: 37 O’Neil Organic Reactions Johnson Claisen: Winter 2013 Ireland deprotonation model: Ireland Claisen: The stereochemical outcome can be controlled by careful control of the enolization conditions. Compare the following to the previous related Johnson Claisen. 38 O’Neil Organic Reactions Winter 2013 The chair TS may not always be accessible: Some common cycloaddition reactions include: 4. Cycloaddition Reactions A cycloaddition reaction is the union of two smaller, independent pi systems. Sigma bonds are created at the expense of pi bonds. How do we explain the following observations? Cycloaddition reactions are referred to as [m + n] additions when a system of m conjugated atoms combines with a system of n conjugated atoms. In a cycloaddition, a pi system may be attacked in one of two distinct ways. If the pi system is attacked from the same face, then the reaction is suprafacial on that component. If the system is attacked from opposite faces, then the reaction is antarafacial on that component. 39 O’Neil Organic Reactions Role of FMO’s: Winter 2013 Can you design suitable substrates for an inverse electron demand Diels-Alder reaction? [2+2]-Cycloaddition Two geometries of approach can be envisioned. Consider thermal activation: HOMO-LUMO gap controls the rate of reaction. Smaller gap = faster reaction. Electron-withdrawing groups lower the energy of the HOMO and LUMO. Electron-donating groups raise the energy of the HOMO and LUMO Reactions between electron-rich dienes and electron-poor dienophiles are referred to as normal electron demand DielsAlder reactions. The most significant orbital overlap is between the HOMOdiene and LUMOdienophile. For a normal electron demand process the most valuable feature of a good dienophile is a low-energy LUMO, usually achieved by conjugation to an electron withdrawing group. The simplest approach (Supra/Supra) is forbidden under thermal activation. The less obvious approach (Antara/Supra) is allowed thermally but geometrically rather congested. 40 O’Neil Organic Reactions Photolytic [2+2]-cycloadditions are quite common. Winter 2013 a) Stereochemistry The Diels-Alder reaction is stereospecific (i.e the relative stereochemistry in the diene and dienophile are preserved in the product). Compare: [4+2]-Cycloaddition Normal Diels-Alder reaction under thermal activation: Suprafactial with respect to both reaction components. Reaction proceeds through a boat transition state. 41 O’Neil Organic Reactions Endo products are typically favored even though exo products are often more stable. Winter 2013 Because of the well-defined stereochemical and regiochemical behavior, the Diels-Alder reaction has been used extensively in complex molecule synthesis. Required Reading: Nicolau, Angew. Chem. I. E. 2002, 41, 1668. see also: Tadano et al. Chem. Rev., 2005, 105, 4779. Some examples: b) Regiochemistry Regiochemistry can often be predicted by considering polarity of the reacting substrates. 42 O’Neil Organic Reactions Enantioselective Diels-Alder Reactions. Winter 2013 Chiral Lewis Acid Catalyst: One system of broad utility employs an oxaolidinone as a chiral auxiliary. Role of Lewis Acid: Organocatalyst O Me CHO 10 mol% cat. H 90% ee H2O, 0 °C 90% cat Ph O N Me endo O N H Macmillan JACS 2002, 122, 2458 43 O’Neil Organic Reactions Ch. 5 Oxidation Reactions. Winter 2013 Organic Syntheses, Coll. Vol. 10, p.696 (2004); Vol. 77, p.141 (2000). Alcohol Oxidations. Good for small scale reactions. Tolerant of a wide range of functionality. Can buffer with pyridine or NaHCO3(s). Some examples: General mechanism: O There are a number of reagents for this purpose, this is a survey of some of the most common reagents used in synthesis. O O Dess, Martin, J. Org. Chem. 1983, 48, 4155. Dess, Martin, J. Am. Chem. Soc. 1991, 113, 7277 HO O OTMS O Dess-Martin, H 1. Dess-Martin Periodinane O OTMS H NaHCO3, CH2Cl2 O O H OTMS H O Preparation: OTMS Synlett, (4), 313-14; 1992 44 O’Neil Organic Reactions Winter 2013 Tolerant of a large range of functionality. Basic conditions can cause electrophilic additions α to the carbonyl or β-eliminations: 2. Swern Swern, J. Org. Chem. 1978, 43, 2480. Mechanism: Some Examples: 45 O’Neil Organic Reactions 3. Tetrapropylammonium Perruthenate (TPAP) Winter 2013 4. TEMPO Review: de Nooy et. al Synthesis 1996, 1153. Essentially neutral conditions. Ruthenium is expensive, used catalytically with NMO as the stoichiometric oxidant. Molecular sieves are used to prevent overoxidation of aldehydes to carboxylic acids. Good selectivity for 1° vs. 2° alcohols. Cheap, stoichiometric oxidant is bleach. Mechanism (See Tetrahedron 1998, 54, 667.): Selected Examples: 46 O’Neil Organic Reactions Winter 2013 Examples: b) PCC (Tet. Lett. 1975, 2647) - Only slightly acidic. Workup and removal of chromium salts can be laborious. N H O Cr O Cl O "PCC" Still widely used: 5. Chromium-Based Oxidations a) Jones Reagent (J. Chem. Soc. 1953, 2548.) - Simple Prep: 67 g. of chromium trioxide in 125 ml. of distilled water. To this solution is added 58 ml. of concentrated sulfuric acid and the salts which precipitate are dissolved by addition of a minimum quantity of distilled water; the total volume of the solution usually does not exceed 225 ml. - Very acidic, good for the oxidation of simple primary alcohols to carboxylic acids or secondary alcohols to ketones. 47 O’Neil Organic Reactions 6. Oxidation of primary alcohols to carboxylic acids. Winter 2013 c) Two Step: a) TEMPO plus NaClO2 (J. Org. Chem. 1999, 64, 2564.) - Two step cycle consisting of TEMPO oxidation to the aldehyde followed by NaClO2 oxidation to the carboxylic acid. - There are many choices for step 1. Step 2 can be achieved using NaClO2 in the presence of a phosphate buffer and 2-methyl-2-butene as an acid scavenger. b) RuCl3-NaIO4 (J. Org. Chem. 1981, 46, 3936). - Will also oxidize alkenes. O Ph OH O 2.2 % RuCl3, NaIO4 Ph 1h, rt. 75% CO2Me cat. Ru, NaIO4 Ph rt. Ph OH O Ph CO2Me CO2H JACS 1996, 118, 6897. 48 O’Neil Organic Reactions Oxidation of Carbon-Carbon Double Bonds Stereochemistry Consider the following: 1. Epoxidation Reactions. Winter 2013 Peroxyacids: Mechanism: Rickborn, J. Org. Chem. 1965, 30, 2212. Singleton and Houk, J. Am. Chem. Soc. 1997, 119, 3385. 49 O’Neil Organic Reactions Winter 2013 Three of the following reactions are diastereoselective the fourth is not. Explain. There is a small difference in the energies of the products, but a larger difference for reagent approach in the transition states. Allylic Alcohols Henbest, J. Chem. Soc. 1957, 1958. Original proposal for selectivity: 50 O’Neil Organic Reactions Enantioselective Epoxidation: Sharpless Asymmetric Epoxidation Sharpless, Katsuki, J. Am. Chem. Soc. 1980, 102, 5974. Review: Pfenniger, Synthesis 1986, 89. Sharpless Tetrahedron 1994, 50, 4253. Winter 2013 The enantiofacial selectivity is determined by the choice of ligand. As drawn, (-)-DET would result in epoxidation from the top face while (+)-DET would give the epoxide on the bottom face. The original paper described the first truly general and useful asymmetric reaction. R1 R2 R3 yield ee(%) H H H Ph n-decyl H Pr n-decyl H H Me H H H Ph 15 80 82 87 79 73 89 90 95 95 3 Å or 4 Å molecular sieves are required to ensure both high conversion and ee. A typical reaction is run with 5 mol% Ti(iPrO)4, and 6 mol% (+) or (-) tartrate ester. Some recent examples: 51 O’Neil Organic Reactions Winter 2013 observation and chiral cinchona alkaloids ligands as the source of asymmetry. Some useful patterns of reactivity for 2,3-epoxy alcohols: Asymmetric Dihdroxylation: Sharpless Pthalazine (PHAL) and diphenylpyrimidine (PYR) derivatives of DHQ/DHQD give generally higher ee and allow for the formulation of AD-mix-α (contains (DHQ)2PHAL) and AD-mix-β (contains (DHQD)2PHAL). These commercially available systems contain: (DHQ)2PHAL or (DHQD)2PHAL 0.0016 mole Potassium carbonate, 0.4988 mole Potassium ferricyanide 0.4988 mole (reoxidant) Potassium osmate dihydrate 0.0007 mole (non-volatile Os(VIII)) Hentges, Sharpless J. Am. Chem. Soc. 1980, 102, 4263. Review: Chem. Rev. 1994, 94, 2483. The catalytic variant of an old and powerful reaction: Criegee noted that dihydroxylation could be accelerated in pyridine. Sharpless’ asymmetric variant builds upon this 52 O’Neil Organic Reactions The facial selectivity can be predicted by: Winter 2013 Ch. 6 Reactions at the Carbonyl: Formation of C-H and C-C Bonds. For mono-substituted alkenes, locate RL, then orient as shown. Some examples: Reduction with Hydride Reagents 53 O’Neil Organic Reactions NaBH4 LiBH4 LiAlH4 BH3 DIBAL-H RCHO R2CO Nucleophilic Hydride Reagents a) Sodium Borohydride, NaBH4: Most commonly used in MeOH to reduce ketones and aldehydes. b) Lithium Borohydride, LiBH4: In THF or Et2O the increased Lewis acidity of Li+ vs. Na+ makes this a more powerful reductant that NaBH4. Can reduce some esters and lactones, commonly used to cleave oxazolidinone auxiliaries. c) Lithium Aluminum Hydride, LiAlH4: Powerful hydride reagent that reduces essentially all carbonyl groups as well as other functional groups. d) Lithium tri(sec-butyl)borohydride, Li(s-Bu)3BH: Bulky hydride that is valued for increased stereoselectivity. e) Sodium Cyanoborohydride, NaCNBH3: Stable in acid (pH=3), primarily used to reduce imines (as part of the reductive amination process). Winter 2013 RCO2R RCO2H RCONR’2 RCN alkene Some Examples: Electrophilic Hydride Reagents a) Borane, BH3: Most commonly as the THF- or Me2Scomplex. Used to reduce amides and acids, but will also react with olefins and several other functional groups. b) Diisobutylaluminum Hydride, DIBAL-H): The reagent of choice for the reduction of nitriles to aldehyde (via the imine), lactones to lactols, some esters to aldehydes, and α,β-unsaturated esters to allylic alcohols. 54 O’Neil Organic Reactions Cyclic Ketones Winter 2013 Enantioselective Ketone Reductions Review: Itsuno, S. Org. React. 1998, 52, 395. reagent axial equitorial NaBH4 LiAlH4 L-Selectride 14 10 96.5 86 90 3.5 Chlorodiisopinocampheylborane, (−)-Ipc2BCl, DIP-Cl Probably the most widely used of the many reagents for this purpose. Particularly useful for aryl/methyl ketones. Mechanism: SMALL reagents prefer axial attack while LARGE reagents prefer equatorial attack. These reactions are under kinetic control: Example: Org. Process Res. Dev., 2010, 14, 193–198. 55 O’Neil Organic Reactions Oxazaborolidines: Itsuno-Corey System (“CBS” Reduction) Organolithium, Grignard, and Organocopper Reagents: Hard vs. Soft Nucleophiles Corey, E. J. Angew. Chem. I. E. 1998, 37, 1986. We saw previously that according to Frontier Molecular Orbital Theory, the most important interactions are between the HOMO of a numcleophile and the LUMO of an electrophile. A broadly useful catalytic enantioselective reducing system. - Corey, E. J. et al. J. Am. Chem. Soc. 1969, 91, 5675. N B H Ph Ph BH3-THF N O H3B O O OBH2 RL RS H Ph Ph N H2B H RL B Me Me H RL B H Ph Ph O N H2B O H RS Hard nucleophiles are characterized by a relatively lowenergy HOMO. These react fastest with hard electrophiles which have high-energy LUMO’S. The large separation between the HOMO and LUMO makes these interactions more coulombic in nature and therefore typically involve charged species. Soft nucleophiles in contrast have a relatively highenergy HOMO. These react with soft electrophiles that have low-energy LUMO’s. Reactions of this type are therefore governed primarily by orbital overlap considerations. Example: Catalytic Cycle: H Ph Ph Winter 2013 RL B RS The hydroxide ion is a hard nucleophile, because it has a charge, and because oxygen is a small, electronegative element. Accordingly, it reacts faster with a hard electrophile like a proton than with a soft electrophile like bromine. However, an alkene is a soft nucleophile, because it is uncharged and has a high-energy HOMO. Thus it reacts faster with a soft electrohile like bromine which has a low-energy LUMO. HO- + H+ is faster than H2C=CH2 + H+ is slower than HO- + Br Br O H2C=CH2 + Br Br O RS 56 O’Neil Organic Reactions Hard vs. Soft (contd.) Winter 2013 Example: 1,4-Addition Mechanism: 2. Organocopper Reagents - Organolithium + Copper(I) salt: If “R” is precious (note that only one R group gets transferred to the substrate) one can prepare “mixed” higher-order cuprates that utilize a non-transferable or “dummy” ligand (e.g CN or 2thiophenyl): Reagent Synthesis 1. Organolithium and Grignard Reagents - Halide + Metal0 (most common): - Metal-Halogen Exchange: 57 O’Neil Organic Reactions Example: Winter 2013 Review: Knochel, Chem. Rev. 1993, 93, 2117. Enantioselective Organozinc Additions: Review: Pu. L.; Yu, H.-B. Chem. Rev. 2001, 101, 757 Initial Report: Some other organometallics to consider: Organochromium Reagents Review: Fürstner, Chem. Rev. 1999, 99, 991. More recently: Many examples in complex molecule synthesis: See also Halichondrin: J. Am. Chem. Soc. 1992, 114, 3162. Organozinc Reagents 58 O’Neil Organic Reactions Alkyne Additions: Winter 2013 Diastereoselective Additions at CO. Cram proposed the earliest model to account for the diastereoselectivity obtained upon addition to a carbonyl group that contains a stereocente at the α-carbon. • 90° approach of Nucleophile • activated carbonyl is the largest group • doesn’t consider torsional interactions between R and RL Cram, D. J.; Elhafez, F. A. A. J. Am. Chem. Soc. 1952, 74, 5828. Note: Carreira system reported to give no product. How can you explain the result with no chiral ligand? And that the stereoselection is opposite for the following: O OBn OH Et2Zn, Ti(i-PrO)4 OBn OH OBn Cornforth introduced a model to account for the stereochemistry observed with α-chloroketones. Recently supported both experimentally and theoretically for additions of enolboranes to α-alkoxy-aldehydes. • 90° approach of Nucleophile • activated carbonyl is the largest group • net dipole is minimized + TMS TMS TMS MAJOR Cornforth, J.W.; Cornforth, R. H.; Mathew, K. K.; J. Chem. Soc. 1959, 112; Evans, D. A.; Siska, S. J.; Cee, V. J. Angew. Chem. I. E. 2003, 42, 1761 59 O’Neil Organic Reactions Karabatsos introduced an alternative predictive model where the CO group eclipses either the C-RL bond or the C-RM bond Winter 2013 Felkin-Ahn Model: RM O RL Nu RS • • • 90° approach of Nucleophile activated carbonyl is the largest group product ratio is determined by theinteraction of RM and O vs RL and O Karabatsos, G. J. J. Am. Chem. Soc. 1967, 89, 1367 Felkin Noted that these models do not explain the effect of the R-group on selectivity • 90° approach of Nucleophile • first model to consider torsional effects R Anh and Eisenstein computationally studied various conformation preferences and added: RM O RL Nu R S R Felkin-Anh Model • Burgi-Dunitz trajectory of attack • places the best acceptor σ* (usually the large group) perpendicular to attack Anh, N.T.; Eisenstein, O. Tetrahedron Lett. 1976, 26, 155 The Felkin-Anh Model does not accurately explain: Chérest, M.; Felkin, H.; Prudent, N. Tetrahedron Lett. 1968, 18, 2199. 60 O’Neil Organic Reactions In 1959, Cram proposed a model to account for the addition of nucleophiles to α-hydroxy and α-amino compounds. Winter 2013 Allyl Organometallic Additions Allyl organometallic reagents can react in one of two ways. Consider the following: • • Chelation of the metal favors attack from one face of the carbonyl Chelation control can be extended to Cram, D. J.; Kopecky, K. R. J. Am. Chem. Soc. 1959 81, 2748 Most reagents give predominantly the γ-addition product via two different mechanisms: a) For M = B, Ti, or Cr; The reaction proceeds via a “closed transition state”: 61 O’Neil Organic Reactions b) For M = Si or Sn, the reaction proceeds via an “open transition state” under Lewis acid (LA) catalysis: Winter 2013 E-Crotylborane reagents give anti-products via a closed T.S: Reactions that proceed via a closed transition state are stereospecific, meaning that E-crotylation reagents give anti products while Z-crotylation products give syn. Z-Crotylborane reagents give syn-products via a closed T.S: 62 O’Neil Organic Reactions Reactions that proceed via an open transition state give predominantly syn products for both E and Z crotylation reagents. Winter 2013 Chiral Reagents: Brown Allylation and Crotylation Brown, J. Am. Chem. Soc. 1990, 112, 2389. Allylborane: E- and Z-crotylborane: 63 O’Neil Organic Reactions Winter 2013 Some recent examples: Although the stereochemical outcome of the allylboration of aldehydes using B-allyldiisopinocampheylborane is typically reagent controlled, this selectivity may be challenged with certain substrates: How can you explain the different ratios above? Note: Removal of the campheol byproduct can be problematic. 64 O’Neil Organic Reactions The Aldol Reaction: An Alternative to Crotylation for Propionate Synthesis. Winter 2013 Consider the following aldol reaction: How many possible stereoisomers can be formed? What needs to be controlled in order to select for a single stereoiosomer? 1. Enolate Geometry: Nature’s Method: 2. Enolate Facial Selectivity: 65 O’Neil Organic Reactions 3. Aldehyde Facial Selectivity Winter 2013 How do we control enolate geometry? Consider a Z-enolate reacting via a closed transition state: Recall the Ireland deprotonation model: In general, Z-enolates give syn-propionate products while Eenolates give anti products. - Z-enolates: Depending on the nature of R, one can select for E or Z using LDA, although in practice a mixture is generally observed. Example: - E-enolates: 66 O’Neil Organic Reactions Boron Enolates Formation of a boron enolate occurs in two steps, activation of the carbonyl followed by deprotonation with base: Winter 2013 Case Study: Enantioselective Aldol Reactions using chiral oxazolidinone auxiliaries: What are the important orbital interactions during the activation step? What is the purpose of the activation step? Evans, D. A. J. Am. Chem. Soc. 1981, 103, 2876 and 3099. Exclusive Z-enolate formation: Depending on the nature of the borane (BR2X) and Base one can select for either the E or Z enolate: R Et i-Pr t-Bu Cy2BCl, Et3N 79 : 21 97 : 3 97 : 3 Facial Selectivity: 9-BBNOTf, i-Pr2EtN 3 : 97 12 : 88 90 : 10 67 O’Neil Organic Reactions Winter 2013 Ch. 7 Alkene Synthesis. Example: 1. Phosphorous-Based Methods a) G. Wittig received the 1979 Nobel Prize in Chemistry for “many significant contributions to Organic Chemistry.” The Wittig reaction is arguably the most widely used alkene synthesis protocol, due in part to its predictable selectivity: First report: Wittig and Geissler, Liebigs Ann. 1953, 580, 44 Some Examples: 68 O’Neil Organic Reactions The reaction involves addition of a phosphorous ylide to an aldehyde or ketone to generate a betaine intermediate that is in equilibrium with the corresponding oxaphosphetane: Winter 2013 The Wittig reaction is thought to proceed via a “puckered” transition state. The reaction of non-stabilized ylids to give cis-alkene products is under kinetic control while the reaction of stabilized ylids is under thermodynamic control. 69 O’Neil Organic Reactions b) Horner-Wadsworth-Emmons Reaction. Similar to the Wittig reaction, the HWE reaction involves phosphonate stabilized carbanions. The carbanion stabilizing group (W) is necessary for elimination to occur. Non-stabilized phosphonates give stable beta-hydroxyphosphonates. Winter 2013 The electron withdrawing effects are presumed to decrease oxephosphetane lifetime and prevent equilibration. The HWE reaction is particularly useful for macrocyclizations: Horner, L.; Hoffmann, H. M. R.; Wippel, H. G. Chem. Ber. 1958, 91, 6163. Horner, L.; Hoffmann, H. M. R.; Wippel, H. G.; Klahre, G. Chem. Ber. 1959, 92, 2499-2505. Wadsworth, W. S.; Emmons, W. D. J. Org. Chem. 1961, 83, 1733-1738. Z-alkenes from the HWE: Stille-Gennari Modification 2. Sulfur-Based Methods: The Julia Olefination Still, Gennari, Tet. Lett. 1983, 24, 4405. Classically the reaction is carried out in two steps: Base R trans:cis t-BuOK KHMDS, 18-C-6 K2CO3, 18-C-6 KHMDS, 18-C-6 Me Me CH2CF3 CH2CF3 5:2 8:1 1:6 1 : 12 70 O’Neil Organic Reactions The mechanism for elimination is thought to proceed by first E2 elimination of the acyl group followed by single electron reduction of a vinyl sulfone: Winter 2013 Consider the following chemoselective elimination: Samarium diiodide (SmI2) can be used for the elimination of benzoyloxysulfones. This reaction involves first single-electrontransfer (SET) to the benzoyl group followed by elimination of the sulfone: Manipulations at sulfur has led to the development of a one-step “modified Julia” reaction. These typically involve phenyltetrazole (PT) or benzothiazole (BT) sulfones. Blakemore J. Chem. Soc., Perkin Trans. 1, 2002, 2563-2585. 71 O’Neil Organic Reactions Installation is typically via Mitsunobu displacement of the corresponding alcohol followed by oxidation: Winter 2013 While understanding and predicting the stereoselectivity of a modified Julia reaction can be challenging (see Blakemore ref. above), some generalizations can be made: PT-sulfones tend to be more stereoselective than BT. Mechanism: Stereochemistry is determined upon sulfone addition to the carbonyl. BT-sulfones work best with α,β-unsaturated aldehydes. Pyridine sulfones give predominantly the cis-alkene. This is presumably the result of reversible carbonyl addition and an inability of the anti hydroxysulfone intermediate to undergo the Smiles rearrangement. 72 O’Neil Organic Reactions Ch. 8 Alkene Metathesis. Ruthenium catalysts: most widely used metathesis catalysts because of their relative air/moisture stability (can be handled without special precautions) and excellent functional group tolerance. Olefin metathesis is one specific type of metathesis reaction: X + R1 R1 R + RuCl2(PPh3)3 X Y Cl Cl + -PPh3 R1 + R R1 R1 R R2 R1 Alkene Metathesis R + N2 Ph RuCl2(PPh3)3 R2 R1 R1 R + Ph L = PPh3 = P(i-Pr)3 = PCy3 1. + Ph Ru L + Enyne Metathesis R Y Ph Ph Alkyne Metathesis R L Sigma bond metathesis R Winter 2013 2. PCy3 PCy3 Cl Cl Ru PCy3 Ph Grubbs' 1st Generation Catalyst Grubbs et al. J. Am. Chem. Soc. 1992, 114, 3974. CH2 CH2 Catalyst Initiation: Historically, olefin metathesis was used in polymer chemistry Ti, W, Mo, and Ru catalysts with poor functional group tolerance. F3C F3C Ph CHCMe3 O W OEt2 ArO Cl F3C F3C Ph O Mo O N • • Schrock catalyst Schrock J. Am. Chem. Soc. 1988, 110, 1423 • Electron-donating phoshines with large cone-angles increase catalyst activity [PCy3 > P(i-Pr)3 > PPh3]. Initiation is faster if R1 = Ar compared to CH=CPh2. If R1 = electron-withdrawing (-COOR) or electrondonating (-OR, -SR, -NR2), initiation is much slower. 73 O’Neil Organic Reactions Winter 2013 Types of Alkene Metathesis: Note that each step in a metathesis reaction is reversible. Olef in cross-metathesis Recent investigations suggest that a pathway involving dissociation of one of the phosphine ligands is dominant: R CH2 + H2C R' catalyst R' R + H2C CH2 Ring-closing metathesis catalyst + H2C CH2 n n Ring-opening metathesis polymerization Grubbs J. Am. Chem. Soc. 1997, 119, 3887 catalyst n 1. Ring-Closing Metathesis (RCM) “Caught in the act”: RCM H2C Pr CH2 Grubbs' 1 H [M] CH2 Pr Cl PCy3 Ru Cl H Me Me Ph Snapper, M.L. J. Am. Chem. Soc. 1997 119, 7157. H2C CH2 CH2 [M] [M] H2C [M] 74 O’Neil Organic Reactions Winter 2013 Tetrasubstituted alkenes: Effect of Alkene Substitution: Effect of Ring Size: 5- ,6-, and 7-membered ring formations are generally straightforward, however larger rings can be challenging. Grubbs, R. H. J. Org. Chem. 1997, 62, 7310 Reactions above performed using Grubbs’ second generation catalyst: There is an entropic driving force for RCM with the generation of ethylene: Recently there have been reports of performing metathesis reactions under slight vacuum to remove gaseous products. See: J. Am. Chem. Soc. 2000, 122, 58-71. 75 O’Neil Organic Reactions It is important however that this interaction not be too strong/stable: Conformational Requirements: ( )n Winter 2013 Grubbs' I Ru oligomers high dilution Ru O R O R diminished activity O O O O Grubbs' I high dilution 79% Despite the challenges, there are many complex examples of large ring formation by ring-closing metathesis. Note the dense functionality in the following examples: Furstner, A.; Langemann, K. J. Org. Chem. 1996, 61, 3942. Polar functional groups are thought to provide an internal conformational bias for cyclization. O O Ru L L 76 O’Neil Organic Reactions 2. Cross-Metathesis. Challenging due to the mixture of products that are possible: Winter 2013 Through the accumulation of data, alkenes can now be characterized in terms of their reactivity toward crossmetathesis: Type I (fast homodimerization) Type II (slow homodimerization) Type III (no homodimerization) Statistically: Type IV (spectator to CM) terminal alkenes, allyl alcohols, styrenes, allyl-silanes, allyl-sulfides, protected allyl-amines Acrylates, vinyl ketones, acrolein, 3°/2° allylic-alcohols, vinyl epoxides 1,1-disubstituted alkenes, phenyl vinylsulfone, 4° allylic carbons, protected 3° allylic-acohols vinyl nitro-olefins, trisubstituted allylic alcohols J. Am. Chem. Soc., 2003, 125, 11360. 77 O’Neil Organic Reactions This then allows for the design and execution of selective crossmetathesis reactions: Winter 2013 More recently, Z-selective cross-metathesis catalysts have been developed: Hoveyda et al. Nature 2011, 471, 461 Putting it all together: 78