Curriculum Vitae Zhenping Zhong, Ph.D. Minnie Belle Heep Center, Rm.324 Texas A&M University College Station, TX 77843-2475 Office: (979) 8459756 Home: (979) 4858485 E-mail: zzhong@tamu.edu Education 1992-1996 Ph.D. in Molecular and Cell Biology, Institute of Developmental Biology, Chinese Academy of Science, Beijing, China Thesis: Expression of Rice and Sorghum Chloroplast Photogene (psbA) Regulated by its 3' Untranslated Region 1988-1991 M.S. in Plant Genetics and Biochemistry, Fujian Agricultural University, China Thesis: Investigation of Soybean Origination and Evolution Based on Their Karyotypes and Isozymes 1981-1985 B.S. in Plant Genetics and Breeding, Fujian Agricultural University, Fujian, China Professional Experiences 2002,6-present Assistant Research Scientist, Laboratory of Dr. Max Summers, University of Texas A&M University Design and conduct research on Baculovirus proteins trafficking in insect cells and their regulations on host cell cycle 1998-2002,5 Postdoctoral fellow, Laboratory of Dr. Donald R. Helinski, University of California San Diego Conducted research in Microbiology, Molecular biology and Biochemistry Directed students trained in above related areas 1996-1998 Associated Professor, Fujian Agricultural University Conducted research on the expression of major photogenes in plants funded by China Science Foundation as the Principle Investigator Assisted in establishing the Center for Plant Genetics and Molecular Biology of Fujian Agricultural University Supervised graduate and undergraduate students in experimental design and techniques in the areas of molecule biology and genetics Instructor for Molecular Genetics course taken by graduate students and General Genetics course taken by undergraduate students 1990-1992 Lecturer, Faculty of Fujian Agricultural University Instructor for General Genetics course taken by undergraduate students Supervised undergraduate students in Plant Genetics Lab 1985-1990 Teaching and Research Assistant, Fujian Agricultural University Supervised undergraduate students in Plant Genetics Lab Summary of Research Experiences 1. 2002,6 – present: I am currently recruited as a Research Scientist in Dr. Summers lab to focus on two projects as follows: The molecular basis of virus envelope protein structure and function, molecular sorting, trafficking and assembly into viral-induced nuclear membranes during baculovirus infection: Baculovirus infection results in the aboundant production of intranuclear membranes that serve as a source of the occlusion derived viral envelope (ODV). During infection, a synchronous pulse of ODV envelope proteins insert into the endoplasmic reticulum (ER), traffic to the nuclear envelope, to virally-induced microvesicles, and to the ODV envelope. Using ODV envelope proteins as reporters, we are investigating the molecular basis of this pathway. Research includes construction of recombinant viruses, over-expression of specific viral membrane proteins in baculovirus system, protein purification and accurate identification of interacting proteins using state-of-the-art protein separations 2. 1998 – 2002, 5 Being a postdoc fellow in Dr. Helinski's lab at UCSD, I have worked on the following two projects: Identification and characterization of the genes present on plasmids >50 kb in size isolated from novel coastal marine sediment bacteria: As a key member of this project I was responsible for: (1) Isolation and characterization of bacteria bearing large plasmids from coastal marine sediments (2) purification of plasmids 50-250 kb in size (3) The construction of six DNA libraries from these plasmids. (4) Computer-based DNA and amino acid sequence analysis of the complete sequences, including open reading frame prediction and sequences similarity comparisons etc. Biochemical and cell-biology studies related to plasmid replication and localization: The biochemical studies on plasmid replication in E. coli and Pseudomonas and the cytological investigation of plasmid localization in bacteria are directed at understanding the mechanisms of replication and stable maintenance of the broad-host-range antibiotic-resistance plasmid RK2 in E. coli and distantly related bacteria. My focus is on the protein-protein and protein-DNA interactions that take place during RK2 replication: (1) Functional interactions of the E. coli DnaA, DnaB, and DnaC proteins or the Pseudomonas DnaA and DnaB proteins with the replication origins of the broad-host-range plasmid RK2 and the narrow-host-range plasmid F. (2) Analysis of interactions between the RK2 replication initiation protein (TrfA) and the DnaA and DnaB proteins of E. coli and the Pseudomonas strains in the presence and absence of the RK2 replication origin. (3) Identification of regions of the TrfA protein responsible for the observed interactions with the bacterial host replication proteins. (4) Localization of the RK2 plasmid and the characterization of plasmid movement in E. coli and the Pseudomonas by using fluorescence tagging-techniques. 3. 1996 -1998 As an associated professor in Fujian Agricultural University (FAU) I obtained a grant from the China National Science Foundation to study rice and sorghum photogene expression in vitro. These studies were directed at understanding how the 3' untranslated region of psbA, a gene playing a key role in plant photosynthesis, regulates expression itself. Honors and Awards China Scholarship Council Fellowship (1998-1999) China Science Foundation Research Grant (1997-1999) First place in Fujian Agricultural University teaching competition (1997) Fujian Agricultural University Outstanding Faculty Award (1992) Fujian Agricultural University Research Award (1991) Current Memberships American Society for Microbiology American Association for the Advancement of Science (AAAS) Areas of Technical Expertise Protein chemistry Biochemistry: 1. Over-expression and purification of bacteria/viral proteins from bacteria and baculovirus infected insect cells, including the construction and amplification of recombinant virus, optimization of the baculovirus system for expression and purification of foreign genes 2. Protein-protein and protein-DNA interactions investigation by using gel exclusion chromatography, column pull-down, immunoprecipitation, , cross-linking, gel retardation, filter binding assay, footprinting, etc. 3. Assays for a variety of isozymes and luciferase as a reporter for gene expression 4. Preparation of protein extracts from plant cell and its specific organelles Microbiology and Cell biology: 1. Mammalian, insect and bacteria cell culture 2. Confocal microscopic technique to tag the subcellular location of DNA or protein molecules during bacteria cell cycle 3. Optimizing the cell growth systems for protein expression and purification 4. Isolation and characterization of different bacteria from environmental sources including morphological observation, Gram-stain, and rapid determination of 16S rRNA sequences for bacteria phylogenetic analyses, etc 5. In vivo and in vitro assays for plasmid DNA replication and stably maintenance in E. coli and distantly related bacteria such as Pseudomonas. 6. Chromosomes karyotype analyses, mitosis and meiosis observation in plant cells Molecular biology: 1. Construction of high quality DNA libraries and specific clones screening 2. Complex plasmid DNA manipulation in vitro, including isolation of huge plasmid DNA (>100 kb) from a variety of bacteria, construction of plasmids >60 kb and introduce them into distantly related bacteria by conjugation or electroporation for further study 3. DNA site-directed and random mutagenesis 4. mRNA preparation and its stability assay 5. Standard molecular biological techniques including gene cloning, PCR amplification, Southern and Northern hybridization, etc. 6. Computer-based DNA/amino acid sequences analysis including ORF prediction, homologs identification, sequences alignments, etc. Computer skills: 1. Bioinformatic analysis of DNA sequences, including the internet-based and Genetics Computer Group (GCG) DNA and protein sequence analysis software, Ribosomal 2. Database Project and GenBank database Vector NTI DNA/protein molecule analysis program Selected Publications 1. Zhenping Zhong, Donald R. Helinski and Aresa Toukdarian (2003). A specific region in the N-terminus of a replication initiation protein of plasmid RK2 is required for recruitment of Pseudomonas aeruginosa DnaB helicase to the plasmid origin. J Biol Chem. 2003 Sep 11 2. Zhenping Zhong, Aresa Toukdarian, Ron Caspi, Donald R. Helinski, et.al. (2003). Nucleotide sequence based characterizations of two cryptic plasmids from the marine bacterium Ruegeria isolate PR1b. Plasmid, 49: 233-252 3. Thanh Ho, Zhenping Zhong, Stefan Aung and Joe Pogliano (2002). Compatible bacterial plasmids are targeted to independent cellular locations in E.coli. EMBO, 21(7) 4. Zhenping Zhong, Ron Caspi, Donald R. Helinski, Aresa Toukdarian, et. al. (2002). A 50 kb plasmid rich in mobile gene sequences isolated from a marine Micrococcus. Plasmid. 47(1): 1-9. 5. Zhenping Zhong, Ron Caspi, Aresa Toukdarian and Donald R. Helinski (2001). Sequence analysis of a 101kb plasmid required for agar-degradation by a Microscilla strain. Applied and Environmental Microbiology, 67 (12): 5771-5779. 6. Joe Pogliano, Thanh Ho, Zhenping Zhong and Donald R. Helinski (2001). Clustering of multicopy plasmids and targeting near mid-cell and quarter-cell position in Escherichia coli. Proceedings of the National Academy of Sciences, 98(8): 4486-4491. 7. Zhenping Zhong, Naihu Wu, 1997. Expressional regulation in vitro of psbA mRNA 3'untranslated region in rice and sorghum. Science in China (Series C), 40(4): 406-413 8. Zhenping Zhong, Naihu Wu, 1996. Isolation and characterization of the chloroplast psbA gene from genetic engineering rice. Journal of Fujian Agricultural University, 25(4): 387393. 9. Zhenping Zhong, Naihu Wu, 1995. The functional comparison of rice and sorghum psbA 3' untranslated region. Genetics researches in China (1991-1994). Abstracts of the Fifth Chinese National Genetics Conference. P257. 10. Zhenping Zhong, 1995. Function of mRNA 3'UTR in chloroplast genes (review). Progress in Biotechnology (China), 15(2): 18-22. 11. Yong Ding, Naihu Wu, Chunxia Chen and Zhenping Zhong, 1994. Genetic Engineering in Agriculture. Published by China Scientific References Publishing House. 12. Zhenping Zhong, Dejin Liu and Qifeng Chen, 1994. Study on the relationship between isozymes and geographical distribution and evolution of three soybean species. Abstract of the Fifth International Soybean Conference, Thailand. 13. Zhenping Zhong, Dejin Liu and Qifeng Chen, 1993. Study on the karyotypes of soybean species. Journal of Fujian Agricultural University, 22:155-158 14. Zhenping Zhong, Dejin Liu and Qifeng Chen, 1993. Peroxidase isozyme of the cultivated soybean (Glysine. max). Journal of Fujian Agricultural University, 22: 29-33 15. Zhenping Zhong, Xuejian Lin and Xiuying Zhu, 1990. Study on the karyotypes of pepper. Journal of Fujian Agricultural University, 19: 277-281