University of Bradford Institute of Cancer Therapeutics Award and Teaching Institution: Final Award: Programme Title: Duration: Subject Benchmark statement: Date Produced: University of Bradford MSc (QAA Framework for Higher Education Qualifications at Level M) Drug discovery Fulltime (1 year) Not applicable 31th March, 2008 Background Based upon a greater understanding of the molecular aspects of disease progression, new opportunities for chemical intervention in disease have emerged. Medicinal chemists provide the expertise required in translating that understanding to the identification of suitable chemical entities, and to the process of optimisation that ultimately leads to the discovery of new medicines. This course is designed to provide you with a ‘state of the art’ education in modern drug discovery, which meets the demand of employers in pharmaceutical industry. Opportunities to learn the latest innovations in drug discovery, including computer-aided drug design and techniques in parallel synthesis as well as electronic data management are provided in the course. In addition, an extended project in drug discovery will not only provide you with a first hand experience of the challenges in original research, but also gives you an opportunity to put in practice the knowledge you have gained in drug discovery. For career progression within this sector a postgraduate qualification is highly desirable. For pursuit of this type of programme, you must have a degree qualification, usually in chemical or biological sciences. The course promotes advanced scholarship within specialised areas concomitant with the development of key transferable skills (in IT and bioinformatics) and research techniques. The course uses a range of teaching strategies to promote independent study and research; to develop a systematic and critical understanding of the molecular basis of disease progression; and to enhance autonomous learning and personal transferable skills. This course will facilitate development of the skills you require for careers in academia, industry or for further research. Enhancement of your independent learning skills during the course will equip you with the skills to succeed as lifelong learners. A. Programme Aims The programme is intended to: A1 Enable you to develop a systematic understanding, critical awareness, and skills in selected disciplines within the field of drug discovery. A2 Provide you with a detailed knowledge of common strategies and methods for the design and discovery of new medicines. A3 Provide a strong knowledge base in the theory and practical skills of synthetic organic chemistry and their application in drug discovery. A4 Develop within the context of drug discovery, a comprehensive understanding of communication, research skills and scientific method. A5 Provide learning opportunities to enable you to think critically and to further develop as an autonomous and lifelong learner. A6 Further develop your ability in a range of personal and key skills. B. Programme Learning Outcomes On successful completion of the programme you will be able to: C. B1 Subject Knowledge & Skills B1.1 critically evaluate specialized areas of drug discovery. B1.2 critically evaluate scientific literature and communicate scientific data. B1.3 critically evaluate and appraise experimental laboratory techniques with specific emphasis on those relevant for efficient preparation of pure organic compounds. B1.4 implement a research project, employ appropriate experimental approaches and report your findings in relation to current knowledge and understanding. B2 Core Academic Skills B2.1 demonstrate critical thinking through an ability to independently: recognise, define and prioritise problems; analyse, interpret, objectively evaluate and prioritise information, recognising its limitations; B2.2 demonstrate a conceptual understanding of research and scientific method through ability to independently: critically evaluate methodology; critically analyse and interpret data; formulate conclusions based on complete and incomplete data. critically evaluate strategies for experimental design and drug synthesis. critically analyze a therapeutic target and current therapeutic approaches to that specific target. B3 Personal & Key Skills B3.1 Prepare and implement a programme of independent learning through reflective study B3.2 Apply skills in time-management, oral presentation, written communication specifically by: writing and interpreting scientific reports. giving an oral scientific presentation. The Curriculum The Postgraduate Diploma is studied over two semesters, each comprising of 60 Credits studied as double (20 Credit) or linked (10+10 Credits) modules. The programme is designed as a core curriculum amounting to 40 Credits in semester 1 and 20 Credits in semester 2. A further 20 Credits in semester 1 and 40 Credits in semester 2 are studied from optional curriculum offered at ICT and other SoLS departments. The Masters programme follows on from this and incorporates an additional 60 Credit research project. D. Teaching, Learning & Assessment Strategies A wide variety of teaching methods appropriate to the learning outcomes of the individual modules are employed throughout the programme, and are supported by Blackboard, the virtual learning environment, provided by the University. A seminar program involving external speakers with international reputations in the field will be established and you will have the opportunity to discuss scientific issues with them. In addition, the Institute of Cancer Therapeutics has regular internal research seminars and attendance at these is encouraged. The teaching methods focus on student-centred approaches to learning. In this way you will develop the attributes needed for life-long learning and continued professional development. All students will be supported by a dedicated Course Tutor for the duration of the course. Academic support is also provided by individual tutors / supervisors for the Critical Appraisal and Research Project through regular meetings for the duration of these activities. Unit Code CR-4016D BM-9132L CR-4014L BM-9122D CR-4001D BM-9132L CR-4014L New New BM-9121D BM-9131D BM-9123D CR-4015Z Unit Title Semester 1 Principles of Drug Discovery Research & Analytical Methods Critical Appraisal of a Current Topic in Drug Discovery Molecular and genetic basis of Disease I Molecular Basis of Cancer and Cancer Therapy Semester 2 Research & Analytical Methods Critical Appraisal of a Current Topic in Drug Discovery Chemical Toolbox for Drug Discovery Case Studies in Drug Discovery Toxicology and Oncology Molecular Biology of the Cell Molecular and genetic basis of Disease II MSc Research Project in Drug Discovery Module Credits Level Type Sem Core Core 20 10 M M 1 linked Core 10 M linked Optional Optional 20 20 M M 1 1 Core 10 M linked Core 10 M linked Optional Optional Optional Optional Optional 20 20 20 20 20 M M M M M 2 2 2 2 2 60 M N/A The curriculum may change subject to the university course approval, monitoring and review procedures. Outcome B1.1 will be developed through a series of lectures, workshops and directed study and assessed by unseen written examination questions, critical appraisal, and course work assignments. Outcome B1.2 will be developed and assessed by critical appraisal and course work. Acquisition of outcomes B1.3-1.5 will occur gradually and cumulatively through a number of modules employing a mix of lectures, investigations, workshops, individual project work and directed private study. They will be assessed by an unseen written examination using constructed-response (essay) type questions, course work, assignments, oral presentation, dissertation and project work. Directed private study will involve you in a variety of activities, which include directed reading of selected textbooks and specified source literature, Blackboard (directed Webbased materials), report writing and other assignments. The development of outcomes B2.1 and B2.2 will be through involvement in small-group seminars, laboratory investigations and individual project-based work and assessed by critical appraisal, course work, seminar paper, written assignment, oral presentation and project work. Key skills are embedded in the curriculum and some modules develop or consolidate and assess one or more of the key skills listed in outcome B3.1 and B3.2. More detailed description of the way that learning is related to assessment in the modules that make up this programme can be found on the module descriptors. E. Admission requirements Up to 30 students can be admitted to the Masters programme in Drug discovery, and this may includes a significant number of applicants from outside the EU. Offers are made following detailed consideration of each individual application. Most important in the decision to offer a place is our assessment of a candidate’s potential to benefit from their studies and of their ability to succeed on this particular course. Entrance requirements will vary, but are set after consideration of each applicant’s academic background and achievements and other relevant experience. As a general guideline, acceptance on the Masters programme requires an Honours degree in chemical or biological sciences, or related disciplines. The expectation is that this would be at 2.2 classification or above. Applicants whose first language is not English will need to demonstrate proficiency in English in accordance with University Regulations. For example, in the IELTS (International English Language Testing Service test) you need to achieve an overall band of at least 6 with 5 in each of the four sub-tests. In the TOEFL (Test of English as a Foreign Language) administered by the Educational Testing Service, Princeton, New Jersey, 08540, USA, you will need to score at least 550 on the paper-based test, 220 on the computer-based test or 83 on the internet-based test. Students with prior learning or prior experimental learning may be accredited on a case by case basis by a claim for APL or APEL. For further details, see http://www.brad.ac.uk/international/english.php. F. Assessment regulations To be eligible for the award of Postgraduate Diploma in Drug Discovery you must attain at least 40% in individual units amounting to 100 Credits and at least 35% in individual units amounting to the other 20 credits. To be eligible for the award of Masters in drug discovery you must attain at least 40% in individual units amounting to 160 Credits (including a 60 Credit Research Project) at least 35% in individual units amounting to 20 credits. If you obtain an overall weighted average of at least 70% at the first attempt, including a mark of over 70% in the 60 Credit project at first attempt you will be awarded a Masters degree with Distinction. If you obtain an overall weighted average of at least 60% at the first attempt, including a mark of over 60% in the 60 Credit project at first attempt will be awarded a Masters degree with Merit. The full assessment regulations covering postgraduate courses are available on the University website. G. Student Support & Guidance The Institute of Cancer Therapeutics will integrate the established practices of the Department of Biomedical Sciences that has a good reputation in this area. Students on the Masters programme will be supported by both a dedicated Course Tutor (through fortnightly meetings with the cohort of students) and allocated individual personal tutorial support. Regular Staff Student Liaison meetings inform the course team of student views and Academic Committee meetings have student representation. Student academic support also is provided by individual tutors / supervisors for the Critical Appraisal and Research Project through regular meetings for the duration of these activities. Formalised formative feedback is given on drafts of these elements prior to submission. Departmental support is enhanced by University Learning Support Services that includes Library and Computing services, a Careers Service and a Disabilities Office. H. Further Information Further information can be obtained from the Postgraduate Admissions Tutor, Institute of Cancer Therapeutics, University of Bradford. Please note that the above information is subject to change. Descriptions of Modules Module Title: Principles of Drug discovery Module Type: Standard module Module Code: To be confirmed Module Credit: 20 Provider: Institute of Cancer Therapeutics Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr. R. A. Falconer Additional Tutors: Prof Laurence Patterson, Dr. R. A. Falconer, Dr. K. Pors Teaching Period: Semester 1 Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): Corequisite(s): None Aims: To provide students with an appreciation and understanding of the various stages in drug discovery process. To provide students with a current and critical evaluation of methods, techniques and strategies used to select molecules for evaluation of their biological properties. In particular, a specific aim is to provide students with an understanding of the criteria used for “drugable” targets. Learning, Teaching and Assessment Strategy: Course material is delivered through a combination of lectures, workshops, and student directed learning. The assessment is through a closed book final examination and coursework assessment. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 24.00 4.00 0.00 200.00 Directed Study: Other: Formal Exams: 170.00 0.00 2.00 Learning Outcomes: On completion of the module you will be able to: 1. Knowledge & Understanding Appraise the drug discovery process in particular strategies and tools for identification and optimisation of leads; importance, strategies and tools for PKPD profiling and other pre-clinical issues, clinical trials, issues related to large scale drug production, intellectual property issues and regulatory affairs. 2. Subject-Specific Skills: Critically evaluate issues that are relevant in a drug discovery process. 3. Personal Transferable Skills Employ generic literature skills for life-long learning (literature & databases). Mode of Assessment: 1. Assessment Type Duration Examination - closed book 2.00 hours Description Students must answer five out of seven questions. Percentage 70% 2. Assessment Type Duration Percentage Coursework 30% Description Assessment through worked problem sheets in four tutorial sessions (7.5% for each). Supplementary Assessment: As Above Outline Syllabus: An overview of the drug discovery process: Sources of leads; lead identification strategies; lead optimisation strategies including diversity oriented synthesis, in vitro and in vivo testing; PKPD and other pre-clinical issues, clinical trials, issues related to large scale drug production, intellectual property issues and regulatory affairs. An introduction to drug discovery: relationship between physical properties and biological activity, Structural features and pharmacological activity, Drug targets: enzymes and enzyme inhibition, types and examples of enzymes, receptors and agonist/antagonist activity, types and examples of receptors. Version No: 1 Reading List: Module Title: Research and Analytical Methods Module Type: Linked 10+10 Module Code: BM-9132L Module Credit: 20 Provider: Biomedical Sciences Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr. S M. Picksley Additional Tutors: Teaching Period: Semesters 1 and 2 Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To provide a comprehensive understanding of selected important advanced biomedical techniques; to develop student autonomy in learning and to develop research skills as well as enhance written communication skills Learning, Teaching and Assessment Strategy: This course will be presented as a series of lectures, tutorials, workshops and laboratory sessions. Students will be responsible for their logbook of activities. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 22.00 3.00 24.00 200.00 Directed Study: Other: Formal Exams: 135.00 16.00 0.00 Learning Outcomes: On completion of the module you will be able to demonstrate: 1. Knowledge & Understanding Critically evaluate advanced biomedical techniques and their application in the laboratory; autonomously design experiments and carry out good laboratory practice to a professional standard. 2. Subject-Specific Skills Develop a knowledge and practical experience of electron microscopy, cell culture and molecular biology, particularly gene cloning and PCR. Evaluate health and safety considerations required legally for experimentation. 3. Personal Transferable Skills Apply practical experience of data handling and statistics, and experience useful to lifelong learning by production of a portfolio of work. Mode of Assessment: 1. 2. Assessment Type Duration Coursework Description Production of a portfolio of work Assessment Type Duration Attendance requirement Description Attendance requirement Percentage 90% Percentage 10% Supplementary Assessment: As above Outline Syllabus: Advanced biomedical techniques: Introduction to biomedical analysis, Good laboratory and clinical practice. Sample preparation for bio analysis. Analytical biochemical techniques: separation methods, GLC, HPLC, FPLC chromatography (ion, gel, affinity), electrophoresis, mass spectrometry. Methods to study cells: microscopy, cell culture, cell proliferation, identification of cell markers & cell purification by FACS. Recombinant DNA techniques: Concepts of gene cloning and its impact on research and biotechnology. DNA techniques; isolation of DNA, DNA modifying enzymes, Polymerise Chain Reaction (PCR),Northern & Southern blotting, molecular analysis of gene expression (proteomics & transgenic approaches). Attendance at guest seminars and production of summary of topic. Version No: 2 Reading List: Module Title: Critical Appraisal of a Current Topic in Drug Discovery Module Type: linked 10+10 Module Code: To be confirmed Module Credit: 20 Provider: Institute of Cancer Therapeutics Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr. K. Afarinkia Additional Tutors: Teaching Period: Semesters 1 and 2 Academic Year: 2008/9 Module Occurrence: A Level: M (Postgraduate Masters) Prerequisite(s): None Corequisite(s): None Aims: Develop a critical awareness and a comprehensive understanding of research being undertaken by other scientists in a specific topic. Provide students with an opportunity to autonomously plan, undertake and report, orally and in writing, at the forefront of biomedical sciences. Learning Teaching and Assessment Strategy: Each student will choose a topic of interest from an extended list by the end of Semester 1, then plan, undertake and report on this topic. An academic member of staff will act as a supervisor for their topic providing guidance and advice on the research area. A draft of the essay will be produced after two weeks in Semester 2 for feedback to be available for incorporation into the final essay at the end of semester 2. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 0.00 15.00 0.00 200.00 Directed Study: Other: Formal Exams: 185.00 0.00 0.00 Learning Outcomes: On completion of the module the student will be able to demonstrate: 1. Knowledge & Understanding Plan and implement autonomously a critical appraisal of a selected area of previously reported research. 2. Subject-Specific Skills Present a seminar on the topic; attend seminars presented by other students and contribute in the form of questions and discussion; produce an extended essay/report. 3. Personal Transferable Skills Organise and manage an extensive literature search at the forefront of knowledge. Develop and evaluate a strategy to communicate in writing and orally your critical appraisal. Review and revise approaches to monitor and critically reflect on progress, to implement a plan for the critical appraisal report. Employ time management through planning the work and meeting deadlines. Work co-operatively with a supervisor to plan work, agree objectives and responsibilities. Contribute to discussions on presentations by peer reviewing other students’ presentations. Mode of Assessment: 1. Assessment Type Duration Coursework Description A critical essay of up to 5,000 words Percentage 80% 2. Assessment Type Coursework Description A seminar of the topic Percentage 20% Duration Supplementary Assessment: As above Outline Syllabus: The syllabus will be determined by the content of the topic that is chosen by the student and will therefore be individual to the student. Version No: 1 Module Title: Molecular and Genetic Basis of Disease I Module Type: Standard module Module Code: BM-9122D Module Credit: 20 Provider: Biomedical Sciences Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr S M Picksley Additional Tutors: Dr S Jones, Dr R M Phillips, Dr M J Thornton Teaching Period: Semester 1 Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): Corequisite(s): None Aims: To develop a systematic and critically evaluative understanding of the molecular and genetic basis of selected important diseases such as cancer (importance of tumour suppressors, oncogenes, DNA repair and cell cycle proteins, cellular responses to hypoxia), disorders of steroid metabolism and synthesis, Parkinson's disease and cystic fibrosis. Develop critical understanding of research methodologies, data handling, and interpretation in selected fields of medical biochemistry; develop specialised practical skills. Learning, Teaching and Assessment Strategy: A combination of lectures, student-led seminars on key research papers, and an essay and laboratory investigations. Study Hours: Lectures: 19.00 Directed Study: 138.00 Seminars/Tutorials: 12.00 Other: 12.00 Laboratory/Practical: 16.00 Formal Exams: 3.00 Total: 200.00 Learning Outcomes: On completion of the module the student will be able to : 1. Knowledge & Understanding Critically evaluate the genetic and biochemical aspects of selected human diseases and experimental approaches for their study 2. Subject-Specific Skills Critically evaluate the current research literature & state-of-the-art reviews; be able to work in a team to design valid experiments & to critically evaluate & interpret results from such experiments in medical biochemistry; be able to utilise biochemical data to evaluate clinical situations. 3. Personal Transferable Skills Carryout multistage calculations and evaluate their overall strategy in a group. Explore problems, compare and review approaches to solve them. Develop a strategy to present a discussion of a research paper with peers. Write essays and a laboratory report. Mode of Assessment: 1. Assessment Type Duration Percentage Examination - closed book 3.00 hours 50% Description One 3-hour examination (two essays to be answered from a choice of five) 2. Assessment Type Duration Percentage Coursework 50% Description Two short laboratory reports, oral presentation/analysis of a research paper and an essay Supplementary Assessment: As above Outline Syllabus: Biochemical and functinal aspects of steriods, detailed structure and function, mechanism of action and role in cancer and wound healing. The biochemistry of cancer including the role of cell cycle proteins in development of cancer. Importance of DNA repair and properties and functions of the p53 tumour suppressor in regulation of apoptosis, the cell cycle and ageing. Origins and significance of hypoxia, cellular adaptation to hypoxia, therapeutic approaches to hypoxia. Biochemical and molecular basis of Parkinson's disease, and cystic fibrosis. Version No: 5 Reading List: Module Title: Molecular Basis of Cancer and Cancer Therapy Module Type: Standard module Module Code: CR-4001D Module Credit: 20 Provider: Institute of Cancer Therapeutics Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr. R. M. Phillips Additional Tutors: Teaching Period: Semester 1 Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To develop a systematic and critical understanding of the hallmarks of cancer, their implications for cancer treatment and opportunities for therapeutic intervention. The molecular biology of cancer will illustrate the identification of potential targets for therapeutic intervention and the importance of tumour pathology current and future treatment strategies. Learning, Teaching and Assessment Strategy: A combination of lectures, invited seminar speakers, student-led seminars and laboratory investigation, plus student directed learning. The student led seminars will consist of a journal club exercise where students will individually review and present a selected research paper. The independent work will be to prepare a detailed profile of a specific biochemical or molecular target that is of current interest in terms of therapeutic intervention. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 24.00 6.00 4.00 200.00 Directed Study: Other: Formal Exams: 163.00 0.00 3.00 Learning Outcomes: On completion of the module you will be able to demonstrate: 1. Knowledge & Understanding Critically evaluate the molecular basis of cancer, its classification, current treatment approaches for cancer and the concept of target identification and validation as applied to anti-cancer drug discovery. 2. Subject-Specific Skills Criticallly evalulate and interpret the current research literature & state of the reviews; be able to interpret routine histological samples to analyse human tumour classification and examples of xenographs. 3. Personal Transferable Skills Develop a strategy to present a discussion of a research paper (journal club); collate and summarise target evaluation for a defined report style. Undertake analysis of the human genome database. Develop generic literature skills for life-long learning (literature & databases). Mode of Assessment: 1. Assessment Type Duration Percentage Examination - closed book 3.00 hours 50% Description Three hour examination - two essays from a choice of five 2. Assessment Type Duration Coursework Description Molecular Target Profile Report 3000 words Percentage 20% 3. Assessment Type Duration Coursework Description Practical Histology Spot Test Percentage 15% 4. Assessment Type Duration Coursework Description Oral presentation (journal club) Percentage 15% Supplementary Assessment: As above Outline Syllabus: There are two major themes within this module. The first is designed to inform students of current practise in Oncology and will focus on the classification of tumours, pathological parameters used to determine therapeutic intervention strategies and the classical chemotherapeutic drugs. The later will focus on the classification of current drugs, their mechanism of action and the problems associated with current drugs (i.e. toxicity, multi-drug resistance etc). It is widely acknowledged that new therapeutics are required and that tumour biology represents the driving force behind the development of new therapeutics. In order to understand these new approaches, the cancer pharmacologist must have a good understanding of the molecular and genetic/epigenetic basis of cancer and this therefore forms the basis of the second major theme in this module. This section will cover the 'hallmarks of cancer' in terms of self sufficiency in growth signals, evading apoptosis, insensitivity to anti-growth signals, sustained angiogenesis, tissue invasion and metastasis, unlimited replicative potential and genetic instability. The emphasis throughout will be placed on the differences that exist between tumour and normal cells as these represent a key step in developing novel therapeutics. Students will develop their ability to work in small groups during laboratory work. They will extend their literature searching, presentation and report writing skills in preparing a journal club, and molecular target profile report. Version No: 1 Reading List: Module Title: Chemical Toolbox for Drug Discovery Module Type: Standard module Module Code: To be confirmed Module Credit: 20 Provider: Institute of Cancer Therapeutics Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinator: Dr. K. Afarinkia Additional Tutors: Dr. K. Afarinkia, Dr. K. Pors, Dr. R. A. Falconer Teaching Period: Semester 1 Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To provide students with a current and critical evaluation of methods, techniques and strategies used to prepare molecules for evaluation of their biological properties. In particular, a specific aim is to provide students with an understanding of the reagents and conditions used for selective molecular transformations. Learning, Teaching and Assessment Strategy: Course material is delivered through a combination of lectures, workshops, and student directed learning. The assessment is a combination of closed book final examination and coursework assessment through worked problem sheets in four tutorial sessions. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 24.00 4.00 0.00 200.00 Directed Study: Other: Formal Exams: 170.00 0.00 2.00 Learning Outcomes: On completion of the module the student will be able to demonstrate: 1. Knowledge & Understanding Critically evaluate, in the context which are relevant to drug discovery such as diversity oriented synthesis, strategies and methods for multistep construction of organic molecules. 2. Subject-Specific Skills Learn about common and generally used chemical reagent, as well as practical means of obtaining organic molecules that are relevant in drug discovery. 3. Personal Transferable Skills Employ generic literature skills for life-long learning (literature & databases). Mode of Assessment: 1. Assessment Type Duration Examination - closed book 2.00 hours Description Students must answer four out of six questions. Percentage 70% 2. Assessment Type Duration Percentage Coursework 30% Description Assessment through worked problem sheets in four tutorial/workshop sessions (7.5% for each) Supplementary Assessment: As above. Outline Syllabus: Topics to be covered include; Survey of methods for the synthesis of organic molecules, Functional group interconversion, selective molecular transformations, protection/deprotection strategies, simple carbocyclic and heterocyclic synthesis, strategies for diversity oriented synthesis. Principles of asymmetric synthesis. Emphasis will be placed upon a practical means of obtaining organic molecules that are relevant in drug discovery, rather than a general revision of the methods. Therefore, many examples of synthesis of pharmaceutics will be presented. Version No: 1 Reading List: Module Title: Case Studies in Drug discovery Module Type: Standard module Module Code: To be confirmed Module Credit: 20 Provider: Institute of Cancer Therapeutics Related Department / Subject Area: Principal Co-Ordinator: Dr. K. Pors Additional Tutors: Dr. K. Afarinkia, Dr. R. A. Falconer, Dr. K. Pors, Prof L. H. Patterson Teaching Period: Semester 2 Academic Year: 2008/9 Module Occurrence: A Level: M (Postgraduate Masters) Prerequisite(s): None Corequisite(s): None Aims: To provide a comprehensive understanding of the background and current issue in research into an area of drug discovery or drug discovery. To broaden student’s appreciation of the wide range of research in drug discovery. Learning Teaching and Assessment Strategy: This course will be presented as a series of lectures and through attendance in departmental seminars throughout the semester. Study Hours: Lectures: Seminars/Tutorials: Laboratory/Practical: Total: 24.00 6.00 0.00 200.00 Directed Study: Other: Formal Exams: 130.00 38.00 2.00 Learning Outcomes: On completion of the module the student will be able to demonstrate: 1. Knowledge & Understanding Evaluate the current state-of-play and future directions in selected areas of medicinal chemistry and drug discovery. 2. Subject-Specific Skills Identify the logical approaches taken to maximise the potency and efficacy of new drugs in preclinical setting and the strategies undertaken to identify best clinical candidates based on PKPD profiles. 3. Personal Transferable Skills Develop a strategy to present and discuss a piece of research both in a written and oral report. Develop an IT strategy to organise their literature research. Demonstrate time management. Work with a supervisor to plan, agree objectives, responsibilities and working arrangements. Review work and identify ways of improving future work. Explore problems and compare and select options to overcome them. Mode of Assessment: 1. Assessment Type Duration Percentage Written exam 2 hours 60% Description Students are required to answer four out of eight questions on a 2 hour closed book exam. 2. Assessment Type Duration Coursework Description A drug discovery report (up to 1500 words). Percentage 40% Supplementary Assessment: As above. Outline Syllabus: An overview of the discovery and development process for four specific medicines currently on the market or soon to be introduced. Topics will include new medicines for cancer therapy, antiinfectives, antidiabetes, cardiovascular, respiratory, and CNS disorders. Version No: 1 Module Title: Toxicology and Oncology Module Type: Standard Module Code: BM-9121D Module Credit: 20 Provider: Biomedical Sciences Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinators: Dr RM Phillips Additional Tutors: Teaching Period: Second semester Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To develop a systematic and critical evaluativon of knowledge and understanding of the molecular and cellular abnormalities resulting in cancer & toxicology, which lead to system abnormalities; critically evaluate modern methods used to control these disorders. Learning Teaching & Assessment Strategy: A combination of lectures, workshops, student-led seminars and laboratory investigation. Autonomous student learning will be encouraged by provision of an essay topic for independent research, anda critical evaluation of a research paper, which will be presented to their peer group, and production of a practical report. Study Hours: Lectures: 23.00 Seminars/Tutorials: 10.00 Laboratory/Practical: 12.00 Total: 200.00 Directed Study: Other: Formal Exams: 133.00 9.00 3.00 Learning Outcomes: On completion of the module you will be able to: 1. Knowledge & Understanding Critically appraise the molecular & cellular basis of cancer as far as current knowledge permits; recognise the modern methods used to control cancer and evaluate them. Evaluate symptoms caused by toxic agents and their effects in causing human disease. 2. Subject-Specific Skills Perform and evaluate practical skills involved in the study of cancer. Critically evaluate and interpret a key research paper and a key topic. 3. Personal Transferable Skills Evaluate autonomously a key topic and a research paper and develop a strategy to communicate them in writing and orally, respectively. Write an essay and a research report. Demonstrate time management. Contribute to presentations in workshops. Mode of Assessment: 1. Assessment Type Duration Percentage Examination 3.00 hours 50% Description One 3-hour examination (two essays to be answered from a choice of five) 2. Assessment Type Duration Percentage Coursework 50% Description Coursework incl laboratory report/essay/oral presentation on research paper Supplementary Assessment: As above Outline Syllabus: Toxicology would cover ionising radiation (eg Chernobyl problem) and non-ionising radiation (eg UV light) and their potential roles in induction of cancers and birth defects. Industrial pollution and disease; the biomethylation of metals and metallloids and toxicology of organometallics (eg mercury, lead). Chlorinated hydrocarbons and environmental health including oestrogen like factors, PCBs, herbicides and pesticides. B napthylamine and bladder cancer, asbsestos in induction of asbestosis and mesothelioma. Microbial toxins and disease. Oncology section would cover carcinogenesis and pre-neoplasia, the relationship between genes and cancer; oncogenes, proto-oncogenes, and tumour suppresser genes, classification and differentiation of tumours, invasion and metastasis. Cancer epidemiology. Methods of cancer control: -therapy and management of clinical disease, including endocrine tumours, cancer chemotherapy and the toxicity of anticancer drugs cytotoxicity assays. Students will develop their ability to work in pairs and small groups during laboratory work and a workshop session. They will extend their literature search, presentation and abstracting skills in preparing individual seminars with word-processed written summaries and their report skills in preparing written laboratory reports. Version No: 3 Module Title: Molecular Biology of the Cell Module Type: Standard Module Code: BM-9131D Module Credit: 20 Provider: Biomedical Sciences Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinators: Dr S Picksley Additional Tutors: Teaching Period: Second semester Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To extend and apply knowledge and understanding of molecular genetics, molecular cell biology and recombinant DNA technology. Learning Teaching & Assessment Strategy: Lectures, seminars, tutorials, workshops and laboratory classes. Study Hours: Lectures: 42.00 Seminars/Tutorials: 7.00 Laboratory/Practical: 15.00 Total: 200.00 Directed Study: Other: Formal Exams: 133.00 0.00 3.00 Learning Outcomes: On completion of the module you will be able to: 1. Knowledge & Understanding Ability to explain and critically discuss the molecular basis of cell structure and function, phenotype and genotype. 2. Subject-Specific Skills A critical appreciation of the knowledge and techniques used to clone a human gene. 3. Personal Transferable Skills Problem solving, manipulation of DNA sequences, I.T skills in bio informatics. Mode of Assessment: 1. Assessment Type Duration Coursework Description Written essay of 3000 words Percentage 100% Supplementary Assessment: As above Outline Syllabus: MOLECULAR GENETICS The bacterial genome and gene expression, DNA replication and fidelity of replication in bacteria. Autogenesis, gene exchange between bacteria, the eukaryotic genome and gene expression, control of gene expression in prokaryotic and eukaryotic systems. RECOMBINANT DNA TECHNOLOGY Concepts of gene cloning and its impact on research and biotechnology. INTRODUCTION TO DNA manipulation techniques: cloning vehicles, gene libraries, DNA sequencing, DNA fingerprinting for the forensic laboratory. MOLECULAR CELL BIOLOGY Molecular nature of cellular responses, principles of signalling molecules and their receptors: receptors; cell-cell recognition/adhesion; general principles of intracellular signalling cascades. Protein structure/function relationships. LABORATORY WORK: To reinforce aspects of theory which relate to bacterial molecular genetics and recombinant DNA technology. Version No: 2 Module Title: Molecular and Genetic Basis of Disease II Module Type: Standard Module Code: BM-9123D Module Credit: 20 Provider: Biomedical Sciences Related Department / Subject Area: Biomedical Sciences Principal Co-Ordinators: Dr AM Graham Additional Tutors: Dr KM Naseem Teaching Period: Second semester Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): None Corequisite(s): None Aims: To gain a systemic knowledge/critical understanding of physiological & clinical biochemistry by detailed reference to selected topics relevant to cardiovascular disease; develop critical appreciation of research methodologies through student led analysis of research papers, data handling & interpretation in selected fields of biochemistry. Learning Teaching & Assessment Strategy: A combination of lectures, data analysis exercises and student-led seminars on research papers and laboratory investigation. Study Hours: Lectures: 19.00 Seminars/Tutorials: 9.00 Laboratory/Practical: 12.00 Total: 200.00 Directed Study: Other: Formal Exams: 157.00 0.00 3.00 Learning Outcomes: On completion of the module you will be able to: 1. Knowledge & Understanding Critically evaluate biochemistry by studying the biochemical basis of metabolic and vascular diseases. Critically evaluate experimental approaches to study of selected metabolic and vascular diseases. 2. Subject-Specific Skills Gain experience in the use of current research and state-of-the-art reviews; be able to work in a team to design valid experiments and to critically evaluate/interpret results from such experiments in medical biochemistry; be able to utilise biochemical knowledge to evaluate clinical situations. 3. Personal Transferable Skills Explore problems, compare and review approaches to solve them. Develop a strategy to present a discussion of a research paper with peers. Write essays and a laboratory report. Mode of Assessment: 1. Assessment Type Duration Percentage Examination 3.00 hours 50% Description One 3-hour examination (two essays to be answered from a choice of five) 2. Assessment Type Duration Percentage Coursework 50% Description 1. Practical; 2. Assessed problem solving exercise; 3. Student led presentation of a research paper. All equally weight Supplementary Assessment: As above Outline Syllabus: The biochemistry of diabetes mellitus; forms of diabetes; treatment of diabetes; molecular aspects of glucose transport. Medical Aspects of lipid and lipoprotein nmetabolism; hyperlipidaemias; cholesterol metabolism, LDL receptor and familial hypercholesterolaemia. Reactive oxygen species, antioxidant mechanisms; lipid peroxidation and importance/roles of oxidised LDL. Biochemistry of vascular disease; atherosclerosis and thrombosis and their treatments; Hypertension; Biochemical regulation of blood pressure, risk factors for hypertension; Gene therapy in vascular disease. Biochemical mechanisms of angiogenesis and importance in development and disease. Version No: 3 Module Title: Research Project in Drug discovery Module Type: Project Module Code: To be confirmed Module Credit: 60 Provider: Biomedical Sciences & Institute of Cancer Therapeutics Related Department / Subject Area: Principal Co-Ordinators: Dr K. Afarinkia Additional Tutors: Teaching Period: Dissertation Academic Year: 2008/9 Module Occurrence: A Level: M (Post-graduate) Prerequisite(s): Critical Appraisal of a Current Topic in Drug Discovery Corequisite(s): None Aims: Carry out original research in an area of drug discovery. Develop self-direction and originality in the application of knowledge and problem solving. Gain an awareness of key issues in the drug discovery process. Develop comprehensive understanding of appropriate laboratory techniques and how those techniques can be used to create and interpret knowledge. Further develop analytical, critical, and IT skills in the presentation of a practical research report. Learning Teaching & Assessment Strategy: Each student has extensive choice allowing a topic of interest to be researched. Following background reading from the scientific literature an extended research project is carried out over 12 weeks under supervision of a member of academic staff. Students are responsible for the legislative aspects of the projects (COSHH assessment etc.). The unit develops and enhances student autonomy in learning. Study Hours: Lectures: 6.00 Seminars/Tutorials: 12.00 Laboratory/Practical: 385.00 Total: 600.00 Directed Study: Other: Formal Exams: 120.00 77.00 0.00 Learning Outcomes: On completion of the module you will be able to: 1. Knowledge & Understanding Research and analyse a current problem in drug discovery and drug development. 2. Subject-Specific Skills Develop literature skills using electronic media sources; critically assess previously reported research; plan & implement programme of original research; appraise a particular scientific problem; analyse & present data in appropriate way; interpret results & discuss critically in context of published work; originally apply knowledge in a specific area. Carry out appropriate COSHH assessment of work undertaken during the project. 3. Personal Transferable Skills Develop a strategy to present and discuss their research in a research report and during viva voce. Develop an IT strategy to organise their literature research. Employ time management. Work with a supervisor to plan, agree objectives, responsibilities and working arrangements. Review work and identify ways of improving future work. Explore problems and compare and select options to overcome them. Mode of Assessment: 1. Assessment Type Duration Percentage Viva voce 40% Description A defence of the findings and conclusions of the research. 2. Assessment Type Duration Percentage Research report 50% Description 12,000 word project report of the background, experimental methods and results of the research. 3. Assessment type Duration Percentage Oral presentation 10% Description A talk comprising a 20 minute presentation of the background, methods and results of the research, and 10 minutes answers on the questions related to the above. Supplementary Assessment: As Original Outline Syllabus: As agreed with the project supervisor. Version No: 1