Simulating Protein Synthesis Pre-Lab Discussion Genes are the units that determine inherited characteristics, such as hair color and blood type. Genes are lengths of DNA molecules that determine the structure of polypeptides (the building blocks of proteins) that our cells make. The sequence of nucleotides in DNA determines the sequence of amino acids in polypeptides, and thus the structure of proteins. In this investigation, you will simulate the mechanism of protein synthesis and thereby determine the traits inherited by fictitious organisms called CHNOPS. CHNOPS, whose cells contain only one chromosome made up of six genes (A, B, C,D, E, and F), are members of the Kingdom Animalia. Each gene is responsible for a certain trait. Materials Blue Pencil; Orange Pencil Procedure 1. To determine the trait for Gene A of your CHNOPS, fill in the information in the box labeled Gene A in the Data Table. Notice the sequence of nucleotides in DNA. On the line provided, write the sequence of nucleotides of mRNA that are complementary to DNA. 2. In order to determine the sequence of amino acids, match each mRNA triplet with the specific amino acid in Figure 1. Using a - (hyphen) to separate each amino acid number, record this information in the appropriate place in the Data Table. 3. Using Figure 2, find the trait that matches the amino acid sequence. Record this information in the appropriate place in the data table. 4. Repeat steps 1 through 3 for the remaining genes (B through F). 5. Using all the inherited traits, sketch your CHNOPS in the space provided (use COLOR). Figure 1 mRNA Triplet UGG UCG GCU UUG GCG CCC UCC UUU AAA CCA AUA GGG UAG AAC GAU CCU GGA UUC Figure 2 Amino Acid Number 20 16 2 4 3 5 7 8 9 12 13 1 6 21 14 11 10 15 Amino Acid Sequence 20-11-13 20-12-13 20-21-21 13-14-15 16-2 12-7-8-1 5-7-8-1 9-8 9-4 11-3-2 11-3-3 6-6-10 6-6-14 Trait hairless hairy plump skinny four-legged long nose short nose no freckles freckles blue skin orange skin male female Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: ACC GGT TAT A Gene C AGC CGA DNA: TTT AAC mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGA DNA: GGG AGG AAA CCC DNA: ATC ATC CTA mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: ACC GGA TAT C Gene C TAT CTA AAG DNA: TTT AAA mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGC DNA: GGG AGG AAA CCC DNA: ATC ATC CTA mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: TAT CTA ACC GGT TAT D Gene C AAG DNA: TTT AAA mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGA DNA: GGT AGG AAA CCC DNA: ATC ATC CCT mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ E Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: ACC GGT TAT Gene C AGC CGA DNA: TAT CTA AAG mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGC DNA: GGT AGG AAA CCC DNA: ATC ATC CTA mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: ACC GGA TAT F Gene C ACC TTG TTG DNA: TTT AAC mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGA DNA: AGC CGA DNA: ATC ATC CCT mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ Name _________________________________________Period _______Date _________ CHNOPS WORKSHEET Observations Data Table Gene A Gene B DNA: DNA: ACC TTG TTG B Gene C AGC CGA DNA: TTT AAC mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Gene D Gene E Gene F DNA: GGA CGC CGC DNA: GGT AGG AAA CCC DNA: ATC ATC CCT mRNA: __________________ mRNA: __________________ mRNA: __________________ Amino Acid Sequence: Amino Acid Sequence: Amino Acid Sequence: _______________________ _______________________ _______________________ Trait: __________________ Trait: __________________ Trait: __________________ Sketch here Analysis & Conclusions 1. Explain what a gene is (HINT: see pre-lab discussion). ________________________________________________ ________________________________________________ ________________________________________________ 2. How many nucleotides form a single mRNA codon? ___________ 3. In your own words, explain how DNA is read to create a protein. ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ 4. What would happen in a sequence of DNA was read backwards? Would the same protein be formed? Why or why not? ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________