tRNA AND TRANSLATION OBJECTIVES 1. What is the structure and function of transfer RNA? (MCA-II science standard) 2. How does translation work? (MCA-II science standard) 3. What is evolution? (MCA-II science standard) INTRODUCTION DNA, the molecule which provides the blueprint for life, is located in the nucleus of cells. mRNA, which formed in the nucleus from DNA, will leave the nucleus, move out to special cell structures called ribosomes, and direct the building of proteins. The building of proteins will involve another type of RNA as well, called transfer RNA or tRNA. PROCEDURE Part A tRNA is similar in structure to mRNA but with one key difference. 1. What is the name of the sugar in the mRNA nucleotide? __________________________ 2. Look at the green models of tRNA nucleotides found in your packet. What is the name of the sugar in the tRNA nucleotide? _______________________ Note that tRNA and mRNA have the same sugar. 3. What is the name of the acid in the mRNA nucleotide? __________________________ 4. Look at the green models of tRNA nucleotides found in your packet. What is the name of the acid in the tRNA nucleotide? _______________________ Note that tRNA and mRNA have the same acid. 5. What are the four nitrogenous bases found in mRNA? a. __________________________ b. __________________________ c. __________________________ d. __________________________ 6. Look at the green models of tRNA nucleotides found in your packet. What are the four nitrogenous bases found in tRNA? a. __________________________ b. __________________________ c. __________________________ d. __________________________ Note that tRNA and mRNA have the same nitrogenous bases. 7. mRNA is built as a single-stranded molecule. √ In comparison, how would you describe the structure of tRNA? _______________________________________________________________________ Part B In this section of the lab, you will model the process of translation. 1. We will start by assuming that mRNA has already formed from DNA by transcription. 2. Build a model of a single-stranded mRNA molecule according to the table below. 3. What tRNA nucleotides will match to the single-stranded mRNA molecule? Complete the table below. mRNA nucleotides tRNA nucleotides guanine adenine cytosine uracil cytosine guanine 4. Using the table you completed as a guide, match the green tRNA nucleotide models to the yellow mRNA nucleotide models. This process occurs outside the nucleus at specialized structures called ribosomes. 5. The tRNA molecules are called transfer RNA because they transfer specific molecules of amino acid. The amino acids will be used to create protein. Match the two green amino acid molecule models to the tRNA molecule models. Which amino acid matches the cytosine / guanine / adenine tRNA? _________________ Which amino acid matches the guanine / uracil / cytosine tRNA? _________________ 6. You have now formed a small protein model composed of two amino acids. Show your model to your teacher and have him/her sign off. ____________________ Part C The process of translation is a matter of translating the message of a series of molecules including DNA, mRNA, and tRNA. A specific sequence of amino acids, or a protein, is formed as a result of the process of translation. 1. mRNA is linked to DNA in the process of ___________________________. Complete the mRNA column of the table. 2. tRNA is linked to mRNA in the process of ___________________________. Complete the tRNA column of the table. 3. tRNA transfers specific amino acids to form a protein. Use the “tRNA nucleotides / amino acids” table to learn how specific amino acids and tRNA molecules link. Complete the amino acid column of the table. 4. The first row of the table has been completed for you as an example. DNA nucleotides mRNA nucleotides tRNA nucleotides AAT UUA AAU amino acids leucine GGG ATA AAA GTT tRNA nucleotides amino acid AGC serine GGG proline AAU leucine CUU glutamic acid AUA tyrosine GCU arginine AAA phenylalanine CAA valine UUU lysine GUU glutamine Part D Not often are there errors in the process of forming proteins from the DNA code of instructions. An error in the process of forming a protein is called a mutation. In an effort to help you understand how errors can occur, we will be looking at a blood protein called hemoglobin. 1. Normally the message of DNA, mRNA, tRNA, and amino acids is translated correctly. In this way, the hemoglobin protein efficiently carries oxygen to cells. Complete the table below that summarizes the normal translation of the message. DNA nucleotides GGG CTT CTT TTT mRNA nucleotides tRNA nucleotides amino acids 2. Sometimes the sequence of DNA nucleotides is not formed correctly. In some people, a very particular disarrangement of DNA nucleotides results in a disease called sickle-cell anemia. Their red blood cells are sickle-shaped rather than round. As a result, their red blood cells cannot transport oxygen as well, resulting in a painful debilitating disease. Note the difference that a slight change in DNA nucleotides can make. DNA nucleotides mRNA nucleotides tRNA nucleotides amino acids GGG CAA CTT TTT 3. The proper arrangement of almost 600 amino acids results in normal formation of the hemoglobin molecule. According to the question above, one mistake involving the replacement of the amino acid ______________________________________ by the amino acid ____________________________________ can result in sickle-cell anemia. 4. Question Sickle cell anemia is the most common genetic disorder among African Americans. This disease can damage the heart and brain and in some cases may be fatal. Then why does this disease persist among African Americans? Answer The answer comes in the fact that many African Americans are only carriers of the disease, meaning that they carry the trait but do not actually have the disease. Carriers are healthy and, in addition, are resistant to another disease called malaria. Application Suppose that a mutation occurs in the DNA of a desert lizard. Because the DNA changed, then the __________ changed. (Hint: this molecule is formed by transcription) Because the mRNA changed, then the sequence of __________ __________ changed. (Hint: these molecules are transferred by tRNA) Because the sequence of amino acids changed, the __________________ changed. (Hint: this molecule is formed by translation) Now suppose that the pigment in the lizard tail is made of protein. Because of the mutation, the protein and thus the pigment changed to blue. How will a blue-tailed lizard fair in a desert of brown soil? ______________________________________ How will the ratio of blue to brown-tailed lizards likely change? _________________ Change in an organism over time, such as lizard tail color, is called evolution.