Year 11 Biology Yearly Revision A local Ecosystem 1. Biotic and abiotic factors An Ecosystem is made up of a group of interacting organisms and the non- living parts. Photosynthesis is the process by which plants use to capture energy from sunlight and make organic compounds. Biotic – living - such as plants, Animals, Micro- organisms Abiotic- non – living factors, such as moisture, salinity, composition of soil, dissolved ions, pH, gases, temperature, wind, viscosity. Abiotic characteristics of environments- aquatic or terrestrial Aquatic can be freshwater or marine ( saltwater) – there is less variation in temperature , pressure increases greatly with depth, water is readily available, buoyancy (floating) is high so organisms do not need to support own bodies as much. Terrestrial environments – are found in different climates and range in different deserts, grasslands, temperate forests and rain forests to mountain regions. There is greater variation in temperature during the day, year. Atmospheric pressure decreases with altitude. Availability of water varies, problem for organisms in dry environments. Buoyancy is low in the air, so organisms have to support themselves. Distribution of species- Is where a species is found Abundance- how many individuals there are at a specific time in a specific area. Factors that determine the distribution and abundance of a species – are climate, food, shelter, resources, interaction of organisms with other organisms. 2. Methods of estimating populations A transect is a straight line, usually marked by a string or tape measure. The organisms that lie along the transect are counted. Random quadrats are usually squares. Organisms found in the area are usually counted. Totals from a series of quadrats are then averaged and then multiplied the number of quadrats that would fill the entire area, to estimate total population. Transects and quadrats are useful for estimating stationary populations. Capture- recapture- A sample of organisms is caught and tagged. These organisms are then released back into the population. After a period of time that allows the organisms to disperse, another sample is taken. The number of previously tagged organisms is recorded and the population size estimated using the formula: Population no. = number of animals tagged x number of animals recaptured Number of tagged animals recaptured Sampling is justified as it is rarely possible to count every organism in a population. 3. Roles of photosynthesis and respiration. glucose + oxygen Carbon dioxide + water C6H12O6+ 6O2 6 CO2 + H2 O - Uses of energy by organisms. for growth and repair for movement to keep organs working for chemical reactions for movement of substances in the organisms to synthesise (make) compounds. 4. A predator- an organism that feeds on another organism. A Prey – an organism that is eaten by another organism. Habitat- part of an ecosystem where an organism is usually found. 5. Allelopathy, parasitism, mutualism, and commensalisms. Biotic relationship Predation Allelopathy Parasitism Mutualism Commensalisms Definition A relationship between members of different species. Is the release of chemical substances by one species to inhibit growth of another. The chemicals are called allelo- chemicals. Is a relationship between two species in which one species benefits and the other species is harmed. The one receiving the benefit is called the parasite and the species being harmed is called the host. A relationship between two species in which both partners benefit. Sometimes they cannot live apart. Is a relationship between two species in which one benefits while the other is neither harmed or receives any benefit. The species receiving the benefit is called the commensal and the other species is called the host. Examples Tadpoles eat algae. Long-neck tortoise eat tadpoles. Wasps eat aphids…. A plant will produce chemicals to poison, repel, or prevent the growth of neighbouring plants. Penicillin mould produces a chemical that prevents the growth of bacteria. Bracken ferns, which are found in many forests, release allelochemicals to inhibit the growth of seedlings of other species. Human tapeworm, tanenia solium, is a parasite infesting the intestinal tract of humans. The tapeworm feeds on the food digested by the human and the human suffers malnutrition and loss of weight. Lichen is fungi and algae living in a mutualistic relationship. Root nodules containing a nitrogen fixing bacteria, Rhizobium, shows a mutualism between the plant and the bacteria. Epiphytes (such as some orchids) grow on branches or trunks of trees and use the tree as a base for attachment. Remora fish attach to sharks with a sucker. They catch food from the shark. 6. Role of decomposers- Matter is recycled in an ecosystem. A large part of this recycling is carried out by decomposers such as bacteria and fungi. 7. Food chains / food webs Food chainsA food chain is a model that shows how energy is passed, in the form of food, from one organism to another. The arrows between the organisms show the direction of energy flow. Producer 1st order consumerHerbivore 2nd order consumerCarnivore 3rd order consumerCarnivore A Food Web- A food web shows all the interacting and interconnecting food relationships. Trophic Interactions (feeding relationships) Producers- Plants are called producers because they make their own food, they are able to use light energy from the Sun to produce food (sugar) from carbon dioxide and water. Plants are autotrophs. Consumers- an organism that feed on other living things. Animals cannot make their own food so they must eat plants and/or other animals. Animals are heterotrophs. There are three groups of consumers. primary consumers (or) herbivores- Animals that eat ONLY PLANTS. Carnivores- Animals that eat OTHER ANIMALS Secondary consumers - carnivores that eat herbivores Tertiary consumers- carnivores that eat other carnivores Omnivores- a consumer that feeds on BOTH animals and plants Decomposers (bacteria and fungi) which feed on decaying matter. Trophic interaction-one in which one organism eats another. Trophic levels- a step along a feeding chain. Biomass pyramid- Relationship between members of a food chin expressed pictorially to show the amounts of living matter at each trophic level. Energy pyramid-relationships between members of a food chin expressed pictorially to show the transfer of energy at each trophic level. 8. Adaptation- as any feature of an organism that increases its chances of survival in an environment. There are different types of adaptations- such as structural, physiological, behavioural. Structural adaptation- are the anatomical features of an organism that assist it to survive. E.g., a fish has a streamlined body which enables it to move freely with reduce friction through water. Physiological adaptation- are metabolic features of an organism that assist it to survive. For example, a fish produces mucus which covers its body and allows water to flow over its scales. Behavioural adaptation- are things that an organism does (or doesn’t do) that assist it to survive. For e.g., a fish swims into seagrass beds to avoid detection by a nearby predator. 9. Competition for resources- Within any ecosystem, some resources are limited. Individuals must compete with each other for these resources to enable to survive. Competition may occur for resources such as food nesting sites, mates, water, light, shelter. For example, if there are too many birds, some will starve and die as there is a limited supply of food. Often there is competition for species. Over a short term if one species has an advantage over another it will limit the growth of that population. Over a long term, competition may lead to the extinction of the disadvantaged species. 10. Impact of humans- the impact of humans on the environment is increasing as the population of humans increases. Impact include: Habitat destruction Pollution Deforestation Introduced species Global warming Patterns in nature 1. Cell theory and cell structure. Because of the limitations of the human eye, much of the early biological research concentrated on developing tools to help us see very small things. As imaging technology became more sophisticated, biological discoveries abounded. Below is a timeline detailing some of those major events in biology. The cell theory Cells are the smallest living units of organisms. All living cells come from pre-existing cells. Each organism is made up of one or more cells. 2. Evidence to support the cell theory- During the development of cell theory scientists used microscopes to make observations of tissue from organisms. As microscopes improved it became easier to observe the cellular structure of tissue. As more organisms have been studied this way it has been accepted that all living things are made of cells. The cell theory was also supported when the theory of spontaneous generation (that simple life forms can develop from non- living substances). Francesco Redi ( Italian, 1627-1697) showed that meat did not become infected with maggots unless it was visited by flies. Louis Pasteur (French, 1822-1888) showed that microscopic organisms called microbes made food rot and caused diseases. In the twentieth century the cell theory was supported by identification of cell organelles and their functions. The discovery of cellular mechanisms and processes. 3. Structures in cells Cell organelles Organelle Mitochondria Chlorplast Golgi Endoplasmic reticulum Plant or Animal Plants and animals Plants Plants and animals Plants and animals Plasma membrane Plants and animals Nucleus Plants and animals Ribosomes Plants and animals Vacuole Cell wall Primarily plants Plants Function Energy transducer--Big ATP producer Energy transducer--produces sugar Packages and modifies synthetic products Nascent proteins are placed inside for modification and transport Boundary of the cell; exchange with the environment Site of hereditary information; control of cell activity Site of protein synthesis; often associated with ER Storage; excretion; water balance Protection; fluid pressure; support Substances within the cell Cells contain organic compounds that are mainly made up of carbon, hydrogen and oxygen, e.g.,- nucleic acids, proteins, carbohydrates, lipids (fats). And inorganic compounds- which are composed of variety of elements e.g.,- water, sodium chloride, carbon dioxide, oxygen. Chemicals commonly found in tissues Chemical Test used Positive result Glucose Benedicts solution. Heat in water bath. Or Use clinistix A drop of iodine added to substance Smear across brown paper A few milliliters of biuret solution added to test substance in test tube, heat in water bath. Add a few drops of silver nitrate Blue green solution turns orange. Clinistix turn yellow to green Turns to purple-black Becomes translucent Blue solution turns purple Add a few drops of toluidine blue Parts without lignin stain pinky purple. Parts containing lignin stain green-blue. Starch Lipids Proteins Chloride ions Lignin A white solid precipitate 4. Chemical move into and out of cells. Cells require basic requirements from surroundings. They release waste into surrounding and at the same time, other molecules move in and out of cell. The movement of substances into and out of cell often depends on the difference between the concentration of substance within the cell and the surrounding environment. The cell membrane is responsible for the movement of molecules into and out of cells. 5. Cell membrane structure- The fluid mosaic model The cell membranes have a double layer structure and are composed of proteins and lipids. (phospholipids, cholesterol and glycolipids). The double layer structure is mainly due to phospholipids that form a fluid ‘skin’ which can easily change in the size. Within each layer, and sometimes through both layers, are protein molecules that are able to move with the phospholipid layer. This structure is called the fluid mosaic model. The fluid mosaic model containing a phopholipid bilayer with embedded proteins. 6. Diffusion and Osmosis Diffusion – the movement of a substance from where it is more concentrated to wher it is less concentrated. Diffusion continues until the two concentrations are equal Osmosis- Diffusion of water through a selectively permeable membrane. 7. Surface area to volume ratio. The ratio of the surface area to volume ratio influences the rate at which substances move into and out of cells. As objects become larger their surface area to volume ratio decreases. For a cell the ratio between its surface area and its volume is very important. As the cell grows bigger, its SA/V ratio decreases . if the cell continued to grow, its SA would not be large enough to allow sufficient exchange of substances for all cell processes to continue. Autotrophs- are organisms that make their own food from simple compounds. They can make organic material from water, carbon dioxide and inorganic material using energy from sunlight, e.g., plants Heterotrophs- are organisms that cannot make their own food and rely on autotrophs or other heterotrophs for food. Photosynthesis Photosynthesis is the series of reactions in which the energy of sunlight is the trapped in the chemical bonds of the sugar, glucose. Photosynthesis takes place in the chloroplasts of cells and the membrane structure of chloroplasts provide such a large surface area to increase the efficiency of photosynthesis. 6CO2 + 6H2O ------> C6H12O6 + 6O2 Sunlight energy Structures in plants for absorbing nutrients and for photosynthesis. Plant roots- have structures such as fibrous roots, root hairs and mycorrhizae to increase the area for absorption of water and minerals. Plant leaves- are flat and thin to facilitate penetration of light. Cells rich in chloroplast are packed at top of leaf to absorb solar energy more easily. Air spaces in leaves store carbon dioxide and oxygen. Some ways plants have of conserving water The stomata necessary for gas exchange open and close so that water loss by transpiration is minimized when plants have no need for CO2. This helps to maintain appropriate water balance. Stomata are open in daytime which permits diffusion of CO2 into the leaf for photosynthesis. At the same time water is lost through the stomata, via transpiration. Epidermal cells on above-ground structures are coated with a waxy cuticle layer (cutin) to prevent water loss. Plant cells have vacuoles to accumulate a volume of water, and cell walls to help maintain turgor. Many cells and tissues need not be maintained because they're dead (saves energy). Differences in leaves shapes include: The shape and size of leaf- some plants have leaves reduced to spikes to minimize water loss. The thickness of the cuticle- the cuticle reduces water loss. The size and number of photosynthesizing cells. Fleshiness of the leaf The number and location of the stomates The size of intercellular air spaces The amount of strengthening tissue Other special leaf structures such as waxy layers and hair. The shape of the leaf and distributions is directly related to the environment in which the plant lives. Digestive systems of animals Digestion is the breaking down of complex foods by digestive enzymes into simpler substances which can be absorbed through the wall of the small intestine into the bloodstream Digestive structure Function Chemical systems composition of diet Herbivore Herbivores have a long alimentary canal relative to Plant materials, their body size. Pant materials stay longer in digestive cellulose. tract as their harder to digest to the cellulose cell wall. Many herbivores have special chambers where bacteria and protests live and make enzymes to break down cellulose into sugars. Carnivore Carnivorous animals such as Tasmanian Devil has long pointed canine teeth for tearing flesh. Their premolars are adapted for shearing and cutting. They have a simple, single chamber for a stomach. The small intestine is much shorter than in omnivores and herbivores. Eat meat, which is predominantly protein and requires less digestion. Nectar feeding animal (honey possum) It has slender long incisor teeth Nectar and pollen are scraped off the long tongue as it is retracted. A diverticulum branches off the stomach and serves as a storage container for nectar. Honey possum feeds on pollen, nectar and insects. Open and Closed circulatory systems Open circulatory system- the circulating fluids passes through blood vessels that open into interstitial spaces. Open circulatory systems are found in many invertebrates, e.g. Crustaceans, molluscs. Closed circulatory system- where the circulating fluid is always contained in a set of blood vessels. Closed circulatory systems are found in vertebrates and a few invertebrates. A heart, or a series of hearts pump blood through blood vessels. Transport systems in multicellular organisms Transport mechanisms and systems move dissolved nutrients and metabolic wastes in many plants and animals. Very small organisms such as amoeba have a large surface area to volume (SA:V) ratio. The area exposed to the environment is great enough for them to able to obtain nutrients and get rid of waste. Algae for example, have no special structures for gas exchange. The cells in algae are in direct contact with the surrounding water in which gases are dissolved. Large multicellular organisms have a small SA:V ratio. They cannot carry out simple exchange of nutrients and wastes. These organisms need a series of tubes through which all materials can be transported. In plants and animals the transport systems have the same function. Transport systems in plants/ animals Animals-the blood system Plants- the xylem and phloem The transport system Carries nutrients from the Digestive system Roots and leaves environment via: Carries gases from environment Lungs and gills Leaves and lenticels (openings for via: gas exchange on woody stems of some plants) To tissues then remove wastes such Nitrogenous waste and carbon Oxygen and carbon dioxide as: dioxide To where they can be excreted via: Kidneys, lungs/ gills Leaves and lenticels Comparison of the Three Transport Systems in Animals Life on Earth The origins of life Life probably originated around 3.8 billion years ago The conditions on the earth were suitable for building life The building blocks of life were generated either by aboitic synthesis or arrived from extraterrestrial sources. These building blocks were used to generate the protiens, nucleic acids, and organic phosphates necessary for life. Life, once established, would change the environment so that life could not arise again. Setting the stage, 3.8 Billion years ago The earths atmosphere is rich in CO2, H2O, N2, lesser amounts of methane and ammonia Temperature at the earths surface drops below 100 C Acidic rains fall, Erosion begins UltraViolet light beats down The earth's crust is thin and hot Warm mineral-rich oceans form The Building blocks of life amino acids nucleic acid bases, sugars, phosphoric acid, phosphoric acid. The Miller-Urey experiment attempted to recreate the chemical conditions of the primitive Earth in the laboratory, and synthesized some of the building blocks of life. Technological advances have assisted in the development of our increased understanding on the origin of life. Technology Contribution to origin of life Electron microscope Used to closely examine meteorite samples and microfossils Radioactive dating Enables more accurate dating of fossils The development of deep- sea vessels Led to discovery of deep sea vents Invention of mass spectrometer Quickly and accurately analysis the chemical composition of samples. Space travel Given information about conditions found in other parts of solar system that may be suitable for life The major stages in the evolution of living things Formation of:organic molecules Time 4 billion years ago membranes 3.5- 4 billion years ago Prokaryotic heterotrophic cells Prokaryotic 2.5- 3.5 billion years ago How they occur Simple molecules could have formed spontaneously in the conditions present in the atmosphere. They react with each other and form more complex compounds. These molecules accumulated in an anoxic environment. As complex compounds form, membrane like structures appear. Membranes could protect and control materials that move in and out of cells. At some point membrane bound organic molecules were able to reproduce themselves, beginning the development of prokaryotic cell. Early cells- similar to bacteria. They have no internal membrane-bound organelles. Simple one celled organisms. 2.0- 2.5 billion The development of autotrophic prokaryotes such as cyanobacteria autotrophic cells years ago Eucaryotic cells 1.2-1.4 billion years ago Colonial organisms 1.5 billion years ago Multicellular organisms 1.0-0.5 billion years ago caused major changes in earth’s atmosphere. They were self feeders and carried out photosynthesis. With the development of autotrophs oxygen become more abundant. The evolution of cells progressed quickly in an oxic atmosphere. Eucaryotic developed, with their membrane bound organelles. Eucaryote cells have different forms, they can be plant, animal or fungal cells. Unicellular organisms group together to form loose associations or colonies of organisms. Individual cells can then take on different roles. E.g blue bottle The next stage is the development of true multicellular organisms with cell specialization, and differentiation of cells into tissues and organs with specific functions Anoxic to Oxic Transition Throughout most of the Precambrian, Earth was dominated by Cyanobacteria and bacteria. As the free oxygen (O2) released by Cyanobacteria slowly rusted the Earth, producing incidentally the great iron-ore deposits, the chemistry of the global environment was changed from anoxic (without free oxygen), suitable only for anaerobic microbes, to oxic, in which aerobic (oxygen-requiring) organisms could thrive. All familiar plants and animals, including ourselves, are aerobic, and depend upon free oxygen for metabolism. Transition from anoxic to oxic conditions during the Precambrian made possible the evolution of complex plants and animals about one billion years ago. Evidence for the origin of life on Earth Palaentological evidence- Fossils provide evidence of the diversity and abundance of organisms throughout Earth’s history. They reveal organisms that are now extinct and provide evidence in changes that have occurred in species over time. Geological evidence- comes from rocks and landforms such as banded iron formations, red beds and uraninite. Banded iron formations are ancient rock deposits that show there were fluctuating levels of free oxygen available at the time. Red beds are layers of sandstone stained with iron oxide that were common in rocks formed 2.3bya. Uraninite is uranium dioxide that occurs in ancient rocks. When the atmosphere contains free oxygen a different compound called uranium oxide forms. The geological evidence provides information about when Earth’s atmosphere changed from anoxic to oxic. Cultural differences in understanding Every group of humans have some understanding of the beginning of time and the creation of life. Examples of cultural explanation include: The fundamental creationist view- Earth was made by God in 6 days. During this time the creation of every organism, including humans was made. This conflicts with the evidence from fossils that show there was a gradual development from simpler to more complex organisms. Aboriginal dreaming- which explains that the beginning spirits created the Earth and animals and plants, and then the spirits joined with the Earth. The Dreaming also conflicts with the information that is derived from the fossil record. Classification Is the grouping of organisms with similar features. The study of classification is called taxonomy. Kingdom- (usually 5) is the major categories that all life is classified under.