CURRICULUM VITAE OF PROF. SHEIKH RIAZUDDIN 1 TABLE OF CONTENT 1. 2. PROFILE OF DR. S. RIAZUDDIN............................................................. 3-5 BIOGRAPHICAL SKETCH ....................................................................... 06-13 3. RECORD OF RESEARCH WORK A. Scientific work...................................................................................... 15-23 B. Development work ............................................................................... 25-26 4. LIST OF RESEARCH PAPERS PUBLISHED A. National ............................................................................................... 27-30 B. International ......................................................................................... 31-50 List of Chapters in Books / Books written .................................................. 51 5. LIST OF PATENTS ................................................................................... 52 6. Suggested Referees ................................................................................. 53 2 PROFILE of PROF. DR. S. RIAZUDDIN Dr. S. Riazuddin obtained Ph.D from the University of Reading, England in 1970. Subsequently, he worked as Postdoctoral Fellow in some of the best labs including those of Bryn Bridges at University of Sussex, Brighton, England; Larry Grossman at Johns Hopkins University, Baltimore, USA; Tomas Lindahl at Karolinska Institute, Stockholm, Sweden; and Eugene Nester/ Milton P. Gordon at University of Washington, Seattle, USA. He returned to Pakistan in 1978, and established a solid and definitive programme of molecular biology research first at the Nuclear Institute for Agriculture and Biology, Faisalabad and then as Founding Director, Centre of Excellence in Molecular Biology, University of the Punjab, Lahore. To overcome the inherent constraints of practicing advanced molecular biology research in a scientifically developing country, he established collaborations with counterpart labs to combine the complementary strengths of the participating laboratories. He made good uses of the local genetic resource in studies on (i) restriction enzymes with Richard J. Roberts (Nobel Laureate), then at Cold Sprig Harbor Labs, NY, USA; (ii) in hearing impairment with Thomas Friedman at NIDCD, Bethesda, MD, USA; (iii) in speech impairment with Dennis Drayna at NIH, MD, USA; and (iv) in vision impairment with Paul Sieving at NEI, Bethesda, MD, USA and John Gottsch at Wilmer Ophthalmology Institute, Baltimore, USA. He possesses the unique quality of combining the complimentary strengths of participating laboratories resulting in extremely productive collaborations. This has helped him to overcome the inherent constraints of working in scientifically developing country and also been a source of additional funding from agencies such as Rockefeller Foundation, NY USA; National Science Foundation, Washington, USA; National Institute of Health, Bethesda, USA and Commission of the European Community, Brussels, Belgium. Dr. Riazuddin is a superb experimentalist, extremely meticulous and possesses a vision to foresee the breakthrough researches in molecular biology, well in-time to assume leadership in new and emerging areas. In the early 1970’s, he recognized the potential of Nobel Prize discoveries by Ham Smith and David Baltimore and immediately moved himself into DNA enzymology and together with Richard J. Roberts (Nobel Laureate), he discovered 45 new restriction enzymes. Recognizing Pakistan’s need in the agriculture sector, he 3 moved into plant molecular biology research and in collaboration with Eugene Nester, Milton P. Gordon, and Marc van Montagu, he genetically engineered rice and cotton with Bt genes. He foresaw the revolutionary potential of the completion of human genome sequence in 2000 and birth of accompanying technologies and moved into research in genetic diseases. In collaboration with Prof. Cao’s laboratory at Cagliari, Italy and Dr. Edward Wilcox’s laboratory at NIDCD, Bethesda, USA, he made exemplary progress in identifying new genes and loci through homozygocity mapping. As the field of DNA sequencing advanced and high throughput (second generation) sequencing became available, he changed the focus of his research from gene identification to gene function and made significant contributions in elucidating the molecular pathway involved in hearing, vision and speech processes. He developed more effective methodologies which will play the role of key technologies in the next decade, in studying molecular events involved in cellular pathways. Dr. Riazuddin’s discoveries of a novel modifier gene (Riazuddin, et al., Nature, 2000), Acting binding protein (Riazuddin et al., Am. J. Hum. Genet. 28: 137-43, 2006) and tight junction proteins (Riazuddin et al., Am. J. Hum. Genet. 79: 1040-51, 2006) have greatly contributing to the understanding of human hearing process. His laboratory identified and characterized CDH23 and PCDH15 (Ahmed et al., Hum. Genet. 124: 215-23, 2008) genes which are essential for both sound and vision transduction. Identification of these genes has given a new insight into possible therapy to overcome retinal degeneration and patients with Usher syndrome. His recent studies on how active bundling protein TRIOBP forms resilient rootlets of hair cells stereocilia essential for hearing (the stereocilia figures were featured on the front page of Cell May 2010) and elucidation of biochemical parameters leading to genetic susceptibility to stuttering (the New England Journal of Medicine, Impact Factor 52) are indeed breakthrough discoveries Several of Dr. Riazuddin’s research papers have attracted editorial comments and reviews and also featured on the journal’s front page (please see page-6). These works have opened new vistas and given new direction to research in human hearing and speech developmental processes. His most recent paper in American Journal of Human Genetics, has been selected for highlighting in the next AJHG podcast. A remarkable feature of Dr. Riazuddin’s studies on genetic diseases is the nature of implicated genes such as Tricellulin, Tight Junction Proteins (DFNB28, DFNB49) and other similar proteins (GNPT) that are expressed ubiquitously in all human tissues, however, a pathological mutation would only the hearing or 4 speech process but no other pathway in the human body. The question therefore, arises, why is it that the pathogenic mutation affects only the auditory/ speech function but no other function in the human body when the gene is expressed ubiquitously. Dr. Riazuddin has proposed a hypothesis to explain this phenomenon. This hypothesis states that efficiency of targeting the mutated/ affected genes is only partially reduced by the mutation that is critical for hearing and speech but insignificant for other bodily functions. His present research is focused on the testing of this hypothesis. His research group has successfully generated knock-out, knock-in and conditional models of mouse and zebra fish to study the expression of the mutated genes in different organs and at various developmental stages. It is expected that in the next five years, the work will generate exciting information on these issues. Dr. Riazuddin’s research has been published in high impact factor journals such as Cell, Nature Genetics, American Journal of Human Genetics and New England Journal of Medicine. A number of his papers have been selected for front page coverage, editorial reviews and comments and for journal podcast coverage. The impact factor of his publications in 2010 is 148.183; during the last five years is 415.407 and cumulative impact factor is 725.277. Prof. Riazuddin has done equally well in extending the applications of his research to the development of products and processes for public use in agriculture and health sectors. Prof. Raizuddin’s group searched different ecological environments to identify bacterial pesticidal genes (Bt genes) and expressed them in cotton to breed insect resistant cotton varieties designated CEMB-01 and CEMB-02. The newly developed Bt cotton varieties are in the process of government approval. He further developed PCR-based diagnostic procedures for the early and reliable detection of Hepatitis B and C virus. The procedures are in use at CEMB as a general public facility since 2000. The most important applied work that has come out of his lab is the cloning of several human pharmaceutical proteins genes including interferon alfa, beta and gamma. The generic human alfa-2a purified in his lab has been transformed into 3miu injections and are waiting permission of ministry of Health to conduct human clinical trials. The products and processes developed in his laboratory have been patented in Pakistan/ USA. 5 BIOGRAPHICAL SKETCH NAME: SHEIKH RIAZUDDIN BIRTH: April 15, 1944, Lahore ,Pakistan Citizenship: USA (Green Card Holder) Nationality: Pakistani Address (Permanent): 8210-Lyndhurst Street,LAUREL.MD20724-2927,USA Address (Temporary): 10-P,Model Town Extension,Lahore-54700, PAKISTAN Job Positions: Visiting Professor, Seoul, National University Seoul S. Korea (15% time). Research Collaborator: National Institute of Health,MD,USA (30% time ) Dean Post Graduate Studies/ Director Research, Allama Iqbal Medical College Jinnah Hospital, Allama Shabir Usmani, Road, Lahore-20, Pakistan Tel: (92)-314-416-3348 Tel: (92)-42-3516-4422 (92)-42-3516-4933 EDUCATION 1954-59 SSC from Govt. High School, Lahore, Pakistan. 1959-65 HSC, B.Sc.(Hons.), M.Sc., Government College, Lahore. 1967-70 Ph.D. in Biochemistry, University of Reading, England. SPECIALIZED COURSES / WORKSHOPS ATTENDED A six-week course on plant molecular biology at Cold Spring Harbor Labs, NY, USA (Summer 1982). A workshop on “Biosafety-2 Advanced Research and Procedures: Case Studies for Designated Experts” organized by ICGEB in Florence, Italy, April 3-8, 2000. A workshop on “Holistic Foundations for Assessment and Regulation of Genetic Engineering and Genetically Modified Organisms” organized by GENOK and UNEP in Tromso, Norway, July 25 – August 07, 2004. 6 RESEARCH EXPERIENCE 1964-65 M.Sc. thesis on "Effect of heat on the digestibility of leaf protein concentrates" with Dr. F.H. Shah at the PCSIR Laboratories, Lahore. 1965-67 Predoctoral research on "Isolation and identification of cholesterol degradation products during photooxygenation of the steroid" with Dr. S.H.M. Naqvi at the PAEC Centre, Lahore, Pakistan. 1967-70 Doctoral thesis on "Calcium metabolism in sheep during pregnancy and lactation" with Prof. C. Tyler and Prof. R.F. Glascock, University of Reading, England. 1970-71 Postdoctoral research on "Effect of radiation on bacterial mating" with Prof. B.A. Bridges at the MRC Cell Mutation Research Unit, University of Sussex, England. 1971-73 Studies on "Genetic restriction and modification in "H. influenzae" with Dr. A. Muhammad, NIAB, Faisalabad, Pakistan. 1973-77 Postdoctoral research on "Repair of UV-irradiated bacterial DNA" in Professor L. Grossman's laboratory at Brandies University, Waltham, MA/ Johns Hopkins University, Baltimore, MD, USA. 1977-78 Studies on the “mechanisms of repair of chemically modified DNA” in Prof. T. Lindahl's laboratory at Karolinska Institute, Stockholm, Sweden. 1978-85 Studies on DNA enzymes and transgenic plants at the Nuclear Institute for Agriculture and Biology, Faisalabad. 1988-89 Studies on transgenic plants at the Department of Biochemistry, University of Washington, Seattle, WA, USA under Fullbright Fellowship Programme. 1990-2004 Studies on transgenic plants at the Department of Biochemistry, University of Washington, Seattle, WA USA during the summers every year, as part of Biotechnology Career Fellowship, Rockefeller Foundation. 1985-2009 Teaching and research in Molecular Biology, National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore. 2010-todate Dean Post Graduate Studies/Director Research, Allama Iqbal Medical College, University of Health Sciences, Lahore. EMPLOYMENT RECORD 1966-70 Scientific Officer, PAEC, Lahore, Pakistan. 1970-77 Senior Scientific Officer, Nuclear Institute for Agriculture & Biology, Faisalabad, Pakistan. 1977-85 Principal Scientific Officer, Nuclear Institute for Agriculture & Biology, Faisalabad, Pakistan. 7 1985-2002 Professor of Molecular Biology, University of the Punjab, Lahore, Pakistan. 1988-1996 Visiting Professor, Department of Biochemistry, University of Washington, Seattle, WA, USA [teaching for 3 months/ year]. 2002-2005 Meritorious Professor of Molecular Biology, Univ. of the Punjab, Lahore. 2004-todate Distinguished National Professor, Higher Education Commission/ National Centre of Excellence in Molecular Biology, Lahore, Pakistan. 1985-2009 Director, National Centre of Excellence in Molecular Biology, Lahore, Pakistan. 2009-2010 Dean Post graduate Studies, Director Research, Allama Iqbal Medical College/Jinnah Hospital, Lahore, Pakistan 2008-todate Visiting Professor, Seoul National University, Seoul, South Korea. HONOURS AND AWARDS Roll of honour from Govt. College, Lahore (1964). Roll of honour from Govt. College, Lahore (1965). Colombo Plan Doctoral Award (1967-71) IARC senior postdoctoral award (1977). Prix Isabelle De Caze De Nue , a Swiss Prize by the IARC, Lyon, France (1978). Gold Medal by the Pakistan Academy of Sciences to Biologists under 40 years of age (1982). Tamgha-i-Imtiaz by the President of Pakistan (1984). Fullbright Fellowship (1987-88). Rockefeller Foundation's Biotechnology Career Fellowship (1989-2004). Gold Medal by Johns Hopkins Society of Scholars (1989). Sitara-i-Imtiaz by the President of Pakistan (1994). Carlos J. Finlay Prize for Microbiology by UNESCO (1997). Kharazmi International Prize by Iranian Government (1997) Izaz-e-Kamal by the President of Pakistan (1998). Hilal-i-Imtiaz by the President of Pakistan (2004). Gold Medal for the Distinguished Scientist of the Year by the Pakistan Academy of Sciences (2004). COMSTECH Award 2005 in Biology (2005) Life Achievement Award (2005),by Higher Education Commission, Pakistan. Islamic Development award in Science and Technology (2008), Jeddah, Saudi Arabia. 8 FELLOWSHIP OF ACADEMIES Fellow, Third World Academy of Sciences, Trieste, Italy (1993). Fellow, Pakistan Academy of Medical Sciences (1994). Fellow, National Academy of Medical Science (1995) Fellow, Pakistan Academy of Sciences (1997). Fellow, The Chemical Society of Pakistan (2003). Fellow, American Academy of Microbiology (2004). MEMBER/FELLOW OF PROFESSIONAL SOCIETIES Member, Johns Hopkins Society of Scholars (1989). Member, American Phytopathological Society (2001). Member, American Society for Biochemistry and Molecular Biology (2001). Member, American Society for Microbiology (2001). Member, Pakistan Society of Biochemists (life Member). Member, Pakistan Society for Microbiology (Life Member). Member, Pakistan Society of Chemists (Life Member). Member, Human Genome Organization ‘HUGO’ (1997). Member, Asia-Pacific International Molecular Biology Network (IMBN) (2000). PRINCIPAL INVESTIGATOR A. Research Projects “Enzymology of DNA repair” sponsored (1980-83) by US National Science Foundation (USNSF) [7709501]. “Enzymology of DNA repair” sponsored (1982-84) by US National Science Foundation (USNSF) [8005168]. “Search for New Restriction Endonucleases” sponsored (1983-86) by US National Science Foundation (USNSF) [8216255]. Search for New Restriction Endonucleases” sponsored (1983-86) by US National Science Foundation (USNSF) 8121869]. “Mutagenicity components of local herbs” sponsored (1980-85) by International Agency for Research on Cancer (IARC), Lyon, France [DEC/80/001-85/003]. “Bt Genes in Chickpea” sponsored (1983-85) by US National Science Foundation (INT 932008). “Cloning of M. luteus repair genes in E. coli” sponsored (1987-90) by USNSF (8713991). “Levels of O6MeG in cancer susceptible tissues in local populations” sponsored (1987) by IARC [C244]. “Host range specificity of Agrobacterium tumefaciens strains from Grown Gall Tumors on Fruit Trees in Pakistan”, sponsored (1988-91) by Agency for International Development, USA (Project I.D.8.275). “Transfer of Bt genes to chickpeas to breed pod-borer resistance” sponsored (199294) by the Board on Science and Technology for International Development (BOSTID), USA. [Project: CS-PB-1]. 9 “Mechanism of Fungus Resistance in Chickpea” sponsored (1988-91) by the Commission of the European Communities [# CI1* - 0847 – M]. “Expression of Insecticidal (Bt) Genes in Cotton Plants”, sponsored (1989-92) by the Commission of the European Communities. “Development of genetic resistance to common pests of Rice crop through expression of Bt toxin genes” sponsored (1990-1993); by Rockefeller Foundation. [RF89026, #44]. “Study of Expression of Bt toxin genes in Rice” sponsored (1993-1995); by Rockefeller Foundation. [RF92003, Allocation #146]. “Development of genetic resistance to common pests of Rice crop through expression of Bt toxin genes” sponsored (1993-96) by Rockefeller Foundation. [RF93003, #188]. “Development of genetic resistance to common pests of Rice crop through expression of Bt toxin genes” sponsored (1996-97) by Rockefeller Foundation. [RF96001, #419]. “Development of genetic resistance to common pests of Rice crop through expression of Bt toxin genes” sponsored (1997-2000) by Rockefeller Foundation. [RF98001, #681]. “Study of Expression of Bt toxin genes in Rice” sponsored (2000-2002); by Rockefeller Foundation. [RF93022, Allocation #228]. “Molecular Characterization and prenatal diagnosis for the prevention of Thalassemia in Pakistan” sponsored (1995-98) by International Atomic Energy Agency (IAEA) [No.302-E1-PAK-8650] “Identification of the Genetic Factors Responsible for the Variable Phenotype of Thalassemia in Pakistan” sponsored (1998-2002) by International Atomic Energy Agency (IAEA) [No. 302-E1-PAK-10507 and No.302-E1-PAK-10507.2]. “Molecular characterization of a new Bacillus thuringiensis Toxin genes” sponsored (2000-03) by the International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy [CRP/PAK97-03]. “Molecular and Genetic basis of Hereditary Deafness” sponsored (2003-06) by the International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy. [CRP/PAK02-01]. “Cellular Regeneration in the Ischemic Heart and other damaged organs” (2004-06), University of Cincinnati & CEMB (Pak-US). “Serum Interferon Response in HCV Hepatitis Patients” (2004-2006); University of Colorado and CEMB (Pak-US). “Intensification of Forensic Services and Research at Centre for Applied Molecular Biology” (2004-06), Strand Analytical Laboratories, Indianapolis, and CEMB (PakUS). Studies on the mechanisms of DNA repair and Cloning of Repair Genes sponsored by US National Science Foundation (USNSF) (No. INT 8713965) “Novel triple acting chimeric antimicrobials for eradication of multi-drug resistant strains of Staphylococcus aureus” a Joint Research Project under Pak-US Science & Technology Cooperative Programme 2007. 10 “Molecular and Genetic basis of Hereditary Deafness” sponsored (2009-11) by the International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy. [CRP/PAK08-11]. Genetic and Epigenetic Networks in Cognitive Dysfunction. Commission of the European Community (GENCODYS,2010-2015) B. Symposia/ workshops / Training Courses Third International Training Workshop on “Phage Mu” sponsored by USNSF (1983). First International Symposium on the applications of Genetic Engineering, sponsored (1985) by USNSF (INT 8411515/INT 8411516). A five-week training course on recombinant DNA techniques, organized in collaboration with NYU Medical Centre (USA) and sponsored (1986) by USNSF (INT 8521610). Second International Workshop on the Applications of Genetic Engineering, sponsored (1986) by USNSF (INT 8600908). Third International Workshop on the Applications of Genetic Engineering, sponsored (1987) by USNSF (INT 8607178). A two-week training course on protein techniques organized in collaboration with Hatfield Polytechnic (U.K) and sponsored by UGC [UGC(FD)84/86]. Second regional training workshop on recombinant DNA techniques in plant genetic engineering, organized in collaboration with Johns Hopkins University, Baltimore, USA and sponsored (1989) by USNSF (INT 870653). US-Pakistan Workshop on Biotechnology and Conventional Research Needs in Oilseed crops in collaboration with University of Washington, Seattle, USA and sponsored (1989) by USNSF (No. INT-8818787). Second in-country training programme for Agriculture Graduates from the Province of Balochistan and Azad Kashmir (1987-89) sponsored by USAID, USA. Fourth in-country training programme for Agricultural personnel from Balochistan and Northern Areas (1990-91) sponsored by USAID, USA. A training course on recombinant DNA and advanced microbial technologies held in Bangladesh and sponsored by UNEP and ISESCO. A regional training workshop on advanced molecular biology techniques, sponsored jointly by the Third World Academy of Sciences and UNESCO. A bi-national symposium on DNA Technology in the improvement of Oilseed crops sponsored by USNSF (1989). A US-Pakistan Symposium on Genomics and Computational Biology sponsored by USNSF (INT 9605034). Third International Symposium Workshop on the Applications of DNA Technology to Agriculture and Health, sponsored by Commission of the European Communities. Fourth International Symposium Workshop on the Applications of Molecular Biological Research in Agriculture, Health and Environment (1995) Fifth International Symposium Workshop on the Applications of Molecular Biological Research in Agriculture, Health and Environment (1997) 11 A training Workshop on Plant Transformation (1998) First training workshop on Crime Scene and Modern Forensic Techniques in Police Investigations (January 2003) NCEMB-COMSTECH International Symposium and Training Workshop on Stem Cells and Regenerative Medicine (2003) Second training workshop on Modern Forensic Techniques for crime scene research and investigation (2004) A symposium-workshop on Genomics and Computational Analysis (2004) Third training workshop on Modern Forensic Techniques for Crime Scene Research and Investigation (2004) Fourth training workshop on Crime Scene Search and Modern Forensic Techniques for Crime Scene Research (2005) Pre - 18th FAOBMB Symposium Satellite Workshop on Bioinformatics (2005) Fifth, Sixth and Seventh training workshop on Crime Scene Search and Modern Forensic Techniques for Crime Investigation (Jan, July & Dec 2006 respectively). BINASIA–Pakistan National Workshop (March 11-12, 2009) A Symposium workshop on “DNA for Justice” (Dec, 2006). 8th Training workshop on crime scene search and modern forensic techniques for crime investigation (July 18-19, 2007) Mini-Symposium on New vistas of plant and medical molecular biology research at CEMB/CAMB (July 21, 2007) A mini-symposium on Microscopy and its biological applications (July 24, 2007) 9th Training workshop on crime scene search and modern forensic techniques for crime investigation (November 21-22, 2007) National Bioforum 2008 (March,24-28, 2008) A mini-symposium on CEMB vision 2015 (August 15, 2008) A mini workshop on Limbal stem cell regeneration therapy (November 05, 2008) A mini symposium on “Future trends in Molecular Biological Research & its applications in agriculture and health” (March 25-27, 2009) MEMBERSHIP OF ADVISORY PANELS AND TECHNICAL COMMITTEES Member Panel of Experts on Genetic Engineering & Biotechnology constituted by the United Nations Industrial Development Organization (UNIDO), Vienna, Austria, (1981-83). Member Panel of Experts, constituted by the International Agency for Research on Cancer (IARC), Lyon, France, (1984). Member, Advisory Panel for "higher education and research in biological sciences", set up by the Federal Minister of Education (1984-85). Member, Panel of Experts for "future planning of plant and animal research", constituted by Advisor to the Prime Minister of Pakistan (1986-88). 12 Member-Secretary National Standing Committee on Biotechnology, Government of Pakistan (1986-94). Member, Technical Committee, Pakistan Science Foundation (1987-95). Member, Technical Committee, National Science Research & Development Board (1989-93). Member-Secretary, Expert Group, constituted by the OIC Standing Committee on Scientific and Technological Cooperation (COMSTECH) on Biotechnology (1990). Member, Executive Committee of the National Commission for Science and Technology (1991-94). Member, National Commission for Science and Technology (1992-95). Member Board of Trustees of Pakistan Science Foundation (1995-98). Member, Pakistan Atomic Energy Commission, (1997-2007). Member, Syndicate, University of Engineering and Technology, Taxila (1999-2003.) Member, Selection Board, University of Engg. and Technology, Taxila (1999-2003.) Member, Technical Committee on Biotechnology, Pakistan Science Foundation (2000-2008). External Assessor for appointments of Associate Professors/ Professors in the Faculty of Food Science and Biotech, University of Putra Malaysia (2000-03). Member, National Biosafety Expert Committee (1998-2003) Chairman, Sub-Committee of National Biosafety Expert Committee (1998-2003). Member, National Commission on Biotechnology (2001-08) Member (GOP Nominee), UNESCO Intergovernmental Bioethics Committee (200108). Member UNESCO Biodiversity Working Group (2002) Member, Expert Committee on Pharmaceutical, Federal Ministry of Health, Islamabad (2003-07) Member Academic Council, Lahore College for Women University, Lahore (2002-05) Member, National Vaccine Development and production Task Force (2003- 07) Member, Council of the Pakistan Academy of Sciences (2003-07) Member STEDEC Technical Advisory Committee (2003) Member, Higher Education Commission Awards Committee (2004). Member Syndicate, University of Health Sciences (2003-06) Member Board of Studies for the Centre for Biotechnology and Informatics Balochistan Univ. of information Technology & Management Sciences (2003-06). Member Technical Advisory Committee, Pakistan Medical Research Council (200306). Member, Implementation Committee of the University of Health Science to monitor the progress of HEC funded projects, (2004-07). Member, Technical Expert Committee of the University of Health Science (2004-07). 13 Member, Board of Governors, Institute of Biotechnology and Genetic Engineering, NWFP Agriculture University, Peshawar (2004 – 07). Member, Council of the SESAME (Synchrotron-light for Experimental Science and its Applications in the Middle East), Cern, Geneva (2004-2008) Member, Expert Committee on Biochemistry & Molecular Biology, Pakistan Academy of Science (2005-08). Member Board of Governors, Centre for Advanced Studies in Vaccinology and Biotechnology, University of Balochistan, Quetta. (2005-2007) Member, Board of Trustees, Pakistan Science Foundation (2005-07) Member, a working group on “Citizen Empowerment and Institutional Reform” for operationalization of Vision 2030 for Pakistan, Planning Commission, Pakistan (2008-09) Member, Committee for making recommendations for suitable teachers under HEC’s scheme “Best University Teacher Award” for the year 2007 (2008). Member/ Executive Director, Asia-Pacific International Molecular Biology Network (AIMBN), Seoul, South Korea Member National Commission on Science and Technology (2009-2012) Membership of Editorial Committee/ Board Physics and Contemporary Needs. Plenum Press, New York (1982-85). Journal of Molecular and Cellular Biochemistry, Canada (2005-11) 14 RECORD OF RESEARCH WORK: A. Scientific Work Prof. S. Riazuddin started research career in 1964 with M.Sc. thesis work on "the nutritive value of leaf protein concentrates". These studies showed that a six hour incubation of defatted leaf protein concentrates at 60 oC, improved the shelf life of the product without affecting its digestibility when studied by in vitro protein hydrolysis, using pepsin, trypsin or pancreatic extracts as proteases. In 1967, he started to work for Ph.D. thesis on calcium metabolism. These studies revealed that elevated mineral requirements in ewes, during such physiological stress conditions as pregnancy – parturition – lactation, were met largely by exchangeable calcium pool in the skeleton; and the depleted mineral skeletal stores of the mother were made good by a gradual increase in absorption of dietary calcium when physiological stresses disappeared. In 1969-70, two Nobel prize discoveries -- that of a site-specific endonuclease in H.O. Smith's laboratory and a reverse transcriptase by Howard Temin & David Baltimore aroused his interest in molecular biology. In 1970, he started post-doctoral research in Professor Bryn Bridges laboratory at the University of Sussex and continued this work in Pakistan (1971-73). These studies demonstrated that during bacterial conjugation transfer of donor DNA to the recipient cells was unaffected by irradiation of the when donor cells by UV/gamma radiations. He further demonstrated that damaged DNA base residues transferred from irradiated donor to un-irradiated recipient cells, were correctly repaired faithfully corrected in repair proficient recipient cells. Fascinated by the intricacies of cellular repair processes, he joined Professor L. Grossman's laboratory to investigate the molecular mechanism of DNA repair in Micrococcus luteus. The choice to employ Micrococcus luteus as a model bacterial system was based on a) its unusual UV resistance thus offering a good bacterial source of UV repair enzymes, b) extreme sensitivity to alkylating chemicals thus providing an ideal cellular system to induce chemical resistance; and c) low levels of endogenous non-specific endonucleases. Ultraviolet irradiation of cellular DNA produces mainly cyclobutane type prymidine-prymidine dimers and a small proportion (1.5%) of 5,6 dihydroxy dihydrothymine glycol modifications. The lethal and mutagenic effects of UV radiation can be attributed to inefficient repair of thymine dimers in DNA. Alkylating chemicals interact with cellular DNA to produce at least 10 different base modifications having different physiological effects. SN1 type alkylating chemicals such as dimethyl sulphate (DMS) and methylmethane sulphonate (MMS) modify ring nitrogens in the purines. SN2 type alkylating chemicals such as N-methyl-N-nitro-N-nitrosoguanidine (MNNG) exhibit and N-methyl-Nnitrosourea (MNU) high reactivity towards oxygen atoms in DNA. Exocyclic oxygens in DNA bases and internucleotide phosphate groups are a common site 15 of attack, yielding a variety of alkylation products which have different physiological effects. Persistence of O6-methylguanine, O4-methylthymine or O2methylthymine has been implicated in the mutagenic/carcinogenic effects of alkylating chemicals. Most of the studies on alkylation damage and repair had focussed attention on the physiological fate of ring nitrogen modifications which constitute about 60-95% of total alkylation products. The fate of highly carcinogenic exocyclic oxygen modifications had been ignored partly because of difficulties in their detection and partly due to inducible nature of proteins involved in the repair of minor alkylation products. Dr. S. Riazuddin's work on DNA repair in M. luteus made significant contributions to the understanding of molecular processes leading to eventual repair of physiologically important base modifications. His works demonstrated that repair of prymidine-prymidine dimers is initiated by a specific UV endonuclease- glycosylase enzyme with the introduction of a cleavage at the N-glycosylic linkage. This enzymatic cleavage results in a base-free deoxyribose originally associated with the '3 thymine residue of the dimer and 5' phosphorylated nucleotide. The resulting apurinic site is removed by cellular apurinic endonucleases. On the other hand, repair of thymine glycol produced as a minor UV product, is initiated by the introduction of an endonucleolytic incision on the 5' side of the damaged base residue by a distinctly separate damage specific endonuclease. The modified base is removed by the exonucleolytic function of DNA polymerase I. Continuity of the repaired strand is restored in both cases by the combined functions of DNA polymerase I and polynucleotide ligase. Contrary to the mode of UV repair, cellular repair of alkylated DNA base modifications in M. luteus depends primarily upon the previous exposure of cells to alkylating chemicals. Pretreatment of cells with sublethal concentrations of N-methyl-N-nitro-N-nitrosoguanidine induces 5.7 fold increased resistance to the lethal effects of challenge doses of the same alkylating chemical. This phenomenon termed as “adaptive response” is accompanied by the synthesis of at least eight proteins. Five of these proteins are DNA glycosylase enzymes numerically designated as GI-GV in order of their decreasing molecular weights. GI, is a constitutive heat labile protein which acts exclusively on 3-methyladenine base residues in alkylated DNA. GII, which is an inducible protein, acts on 3methyladenine, 3-methylguanine, 7-methyladenine, and 7-methylguanine with unequal facility. GIII, is another inducible protein which acts on O 2methylthymine and O2-methylcytosine with no activity on methylated purines (the identity of GIV & GV proteins has yet to be established). The remaining three proteins, identified as methyl transferases are designated as TI, TII, TIII enzymes in order of their elution from a Sephadex G75 column. All three methyl transferases have very narrow substrate specificities with TI acting exclusively on O6-methylguanine base modifications; T2 acting on O4-methylthymine and T3 showing absolute specificity for stereo specific phosphotriesters. All of these enzymes have 16 been highly purified, biochemically characterized and their substrates specificities established. Cellular role of the isolated repair proteins is being investigated by identifying structural genes of these proteins and their cloning on multicopy plasmid DNA in E.coli. Recognizing the absolute need for a reliable and continuous supply of Type-II restriction enzymes in genetic engineering and recombinant DNA work in Pakistan, Professor S. Riazuddin initiated a programme to create a local repository of common molecular tools, and simultaneously searched for new Type-II specificity restriction enzymes. As part of a collaborative effort, involving Dr. R.J. Roberts (Nobel Laureate) and his group at Cold Spring Harbor Laboratory, N.Y., USA, his laboratory has discovered Forty-five new restriction enzymes present in different microbes. The discovery of these enzymes have greatly enhanced the powers of genetic manipulations through recombinant DNA methologies. All the new enzymes have been entered in International DataBank and two of these enzymes (BseRI and BscAI) are being marketed by New England Biolabs, Boston, USA. Dr. S. Riazuddin searched systematically the Pakistani environments for new and novel isolates of Bacillus thuringiensis, possessing pesticidal properties against rice stem borers, rice leaf folder, cotton pink ball worm, chickpea army worm, coleopteral tribolium & rape-seed aphids, and established a local repository of over 500 isolates varying in genetic makeup and showing different insecticidal properties. Using local isolates as the source material, cryIA(a), cryIA(b), cryIA(c), cryIII and cryIV genes (old classification) have been cloned and further manipulated to optimize expression levels in plants. This provides a precious genetic resource for genetic engineering of plants for breeding insect resistance. Dr. S. Riazuddin discovered two novel pesticidal genes which have larvicidal properties against agronomically important pest such as nematode, aphids and white fly. Bacillus thuringiensis parasporal proteins have been previously reported to have insecticidal properties against lepidopteral and dipteral insects. Dr. Riazuddin has for the first time, unequivocally demonstrated that pesticidal activity of Bacillus thuringiensis parasporal protein is not limited to lepidopteral and dipteral insects, but the activity spectrum extends to other agronomically important pests. This has opened new avenues of research and is considered a scientifically important discovery. The excitement may be judged from the fact that a number of laboratories in Europe, USA and Australia are offering to collaborate with Dr.Riazuddin in further exploiting the larvicidal potential of the said novel isolates which are patented in USA, in a joint venture with Calgene, Inc., Davis, California, USA. In 1983, Dr. S. Riazuddin attended a 6-week plant molecular biology course organized by Professor F. Ausubel (Harvard University) at Cold Spring Harbor Labs, N.Y., USA. His participation in the course introduced him to the 17 revolutionary potential of plant molecular biology. In 1988, he spent a sabbatical year in Eugene Nester/M.P. Gordon's laboratory in the University of Washington, Seattle, USA to learn Agrobacterium mediated plant transformation. Recognizing the obvious role of plant biotechnology in the future economic growth and development of Pakistan, he initiated a solid and definitive programme in plant molecular biology to exploit the potential of transgenic plant technologies in breeding genetic resistance against agronomically important pests in rice, cotton and chickpea. To genetically engineer monocotyledonous plants, Dr. Riazuddin developed a particle acceleration device which is a modification of the proprietary device marketed by M/s Dupont, USA through BioRad. He used locally developed device to transform indica rice with Bt pesticidal genes [cryIA(b), cryIA(c) & CryIIA]. Transgenic indica rice plants exhibit inherent resistance against rice leaf-folder and rice stem-borer and no undesirable characteristics, as demonstrated in field trials from 1998 to 2004. Dr. S. Riazuddin’s laboratory genetically transformed elite local varieties of cotton (MNH-93 & CIM482) using Agrobacterium-mediated transformation system with bacterial pesticidal genes from Bacillus thuringiensis including cryIA(b), cryIA(c) & cryIIA. Genetically transformed plants show inherent resistance against American bollworm (Heliothis armigera). In collaboration M/s Ali Akbar Group (Pvt) Ltd, Pakistan, a private seed company, these crops have been field tested in the cotton belt areas of Pakistan and are now in national trials for final approval. Recognizing the revolutionary potential and keidoscopic openings of the information revealed by the completion of human genome sequences and birth of associated DNA analytical techniques, Dr. Riazuddin initiated a programme of studies to elucidate the molecular basis of hereditary genetic disorders, namely -thalassemia, and hearing & vision impairment in Pakistani population. The studies on thalassemia established the frequency of specific mutations in different ethnic groups in Pakistani population. On the basis of this information, his laboratory developed prenatal diagnostic procedures which are being offered to local gynaecologists. The completion of human genome sequence in 2000 was followed by sequencing of a large number of genomes from microbes to plants and animals, however, there was little focus on gene functioning. The second half of the present decade saw a sudden change, while efforts continued on development of methods for rapid genome sequencing (second generation sequencing), renewed efforts were directed on determining gene function, using animal models such as mouse, zebra fish, and fruit fly, and eventually correlating the malfunctioning with pathological disorders in human beings. 18 During the fist half of the present decade, Dr. Riazuddin’s efforts were focused predominantly though not exclusively, on homozygosity mapping to identify new linkages to chromosomal markers that co-segregate with hearing and vision impairment. The linkage interval was narrowed down and the genes in the critical interval were rank-ordered on the basis of known/predicted gene function or expression pattern (in the cochlea or retina). This was a challenging job when the linkage interval covered a gene rich region and/ or the presence of genes of nearly ubiquitous pattern of expression such as Actin, Tricellulin, Tight Junction Proteins. The situation was further complicated when pathogenic alleles were present in non-coding regions of genes such as those that were found to occur in Human Growth Factor (HGF). With the advent of parallel sequencing methods originally conceived by Kraig Ventor, Ham Smith et al., and the availability of high throughput sequencers, it become possible to quickly and cost effectively sequence large regions of genes including the non-coding regions. Recognizing the tremendous powers of new advances in the identification of new genes, he expanded his studies beyond hearing and visions impairment to stuttering and metal retardation. During the second half of the present decade (2005-2010), Dr. Riazuddin’s lab has made a remarkable progress in the identification of new genes and studying their functions. Hearing Impairment: Dr. Riazuddin identified 38 new linkages, 113 pathological mutations and 25 new genes involved in deafness, blindness and speech disorders. His laboratory characterized the CDH23 and PCDH15 genes, which are essential for both sound and vision transduction. The identification of truncated mutant alleles of these genes associated with Usher syndrome type 1 and missense mutations responsible for nonsyndromic hearing loss, represent very unique genotype-phenotype correlations. Identification of these genes led to the discovery of founder mutation R245 responsible for the majority of Usher syndrome type1. This discovery has given new insight into possible therapy to overcome at least retinal degeneration in patients with Usher syndrome. Dr. Riazuddin’s group identified a novel tight junction protein which is localized at the tricellular contact points of many epithelial cell types. In the inner ear, tricellulin is concentrated at the tricellular tight junctions of cochlear and vestibular epithelia, including the structurally complex and extensive junctions between supporting and neurosensory hair cells. This work was published in the Am. J. Hum. Genet. 79: 1040-51 (2006); and it received Cotterman recognition and declared as one of 19 two best papers published in the journal during 2006 Further, it was featured in the Editor’s choice as follows: Featured in editor’s choice. This paper presents the identification of a novel tight junction protein that is essential for hearing. Tricellulin is localized at the tricellular contact points of all epithelial cells and is presumed to control permeability at this site. However, within the inner ear as compared to other body tissues, Tricellulin has an elaborate structure, it localizes within a structurally complex and extensive junctional network between neurosensory hair cells and the adjacent supporting cells. Further studies have developed a knockout mouse model to one of the corresponding human nonsense mutations. It is anticipated that the proposed studies will provide a rational molecular framework, useful for engineering novel therapeutic agents that could effectively target and modulate tight junctions. Dr. Riazuddin’s group recently paper published in “Cell, vol.141(5), 2010” that describes, how Actin binding protein TRIOBP forms resilient rootlets of hair cell stereocilia essential for hearing. The function of rootlets and molecules responsible for their formation was unknown, however, his studies clearly showed that TRIOBP, a cytoskeleton associated protein is localized to rootlets and to uniquely dense bundles reminiscent of rootlets but distinct from bundles formed by ESPIN, an Actin cross linker in stereocilia. This work is master piece and the stereocilia pictures in the paper were featured in editor’s choice and on the cover page of the same issue of “Cell”. Featured on the Cover page of Cell, in Preview as well as in Faculty 1000 website. This paper significantly extends our knowledge about the development of hair cell stereocilia rootlets and function of Triobp as a novel action bundling protein. Dr. Riazuddin’s work on DFNB73 is the first report (Riazuddin et al., 2009) on the identification of mutant allele of Barttin causing nonsyndromic hearing loss in humans and described a unique gentoype-phenotype correlation, which will be helpful for therapeutic inventions. This paper was featured on Cover page of American Journal of Human Genetics 85: 273 (2009) and in Editors' Corner of the of the same journal. Vision Impairment: Blindness is a condition which affects all ages and all societies worldwide. Every year millions lose their eye sight, whereas majority of these cases are familial and most of them are preventable. Among ocular dystrophies, cataracts account for majority of the preventable cases of blindness 20 worldwide, followed by retinitis pigmentosa that affecteds 1 in every 3,000 individuals worldwide. Dr. Riazuddin’s group identified 21 novel loci and genes implicated in the pathogenicity of congenital cataracts and retinitis pigmentosa. Among these new causal loci were identified on chromosomes 1, 3, 7, 8, 13 and 19 along with pathogenic mutations in EPAH2, SIL1, HSF4, GALK1, and in families with congenital cataracts. Similarly new loci were identified on chromosome 2, 11, 17 along with causal lesions in RP1, TULP1, PDE6A, PDE6B, ROM1, MERTK, RLBP1, BBS2, BBS3, BBS8, SLC24A1 and GNAT1 in families with retinal dystrophies. Dr. Riazuddin’s group mapped a nuclear family to a region harboring BBS2, a gene responsible for Bardet-Biedl syndrome. The, sequencing of BBS2 identified a splice acceptor mutation that is expected to result in skipping of the exon 2, without affecting the amino acid sequence of the protein. His studies further showed that this exon is present only in the outer nuclear layer of the retina. This work is published in American Journal of Human Genetics in May 2010. Dr. Riazuddin’s group mapped a novel locus for autosomal recessive RP to chromosome 2p, published in American Journal of Ophthalmology. Further investigation of the critical interval identified the causal mutation in ZNF513, encoding a presumptive transcription factor. Knockdown of znf513 in zebrafish reduced the retinal thickness and the expression of rod and cone opsins. Further, these effects were rescued by co-injection with wild type (wt) but not with the mutant znf513 mRNA. ChIP analysis showed that only the wild type but not the mutant Znf513 binds to the Pax6, Sp4, Arr3, Irbp, and photoreceptor opsin promoters. These results implicated that the ZNF513 C339R mutation is responsible for RP in this family and also that ZNF513 plays a key role in the regulation of photoreceptor-specific genes in retinal development and photoreceptor maintenance. These results appear in the September issue of American Journal of Human Genetics. Dr. Riazuddin’s group mapped congenital stationary night blindness (CSNB) to chromosome 15q and showed a two-base pair deletion in SLC24A1, a putative sodium calcium channel is the cause of the disease. Expression analysis using mouse ocular tissues showed that SLC24A1 is expressed in the retina around postnatal day 7 (P07). Both in situ and immunohistological studies localized SLC24A1 in the inner segment, outer and inner nuclear layers and ganglion cells of the retina. In conclusion, these data expand the genetic basis of CSNB and highlight the indispensible function of SLC24A1 in retinal function and/or maintenance in humans. These data will appear in the October issue of 21 American Journal of Human Genetics and the paper has been selected for high lighting in the next AJHG podcast. --------------------------------Original Message--------------------------From: ees.ajhg.4847.b6266.b2370e09@eesmail.elsevier.com [mailto:ees.ajhg.4847.b6266.b2370e09@eesmail.elsevier.com] On Behalf Of Robin Williamson Sent: Monday, August 30, 2010 11:21 AM To: sriazudd@jhu.edu Cc: Hejtmancik, James Fielding (NEI) Subject: AJHG Submission AJHG-D-10-00477R3 Dear Drs. Riazuddin and Hejtmancik, I am delighted to tell you that your soon to be published AJHG paper entitled "A mutation in SLC24A1 Implicated in Autosomal Recessive Congenital Stationary Night Blindness" has been selected for highlighting in the next AJHG podcast. I will conduct the interview by telephone. I am hoping that you will agree to be interviewed and that you might be available during the afternoon on either Tuesday, September 7th or Wednesday, September 8th. The interview will take about 20 minutes and you will need to be on a landline, not a cell phone and in a quiet office. We are only able to interview one person for the podcasts, but we were not sure which one of you to ask! I hope you do not mind that we are leaving this decision up to you. You are both certainly welcome to be in the room together during the interview, but due to the sensitivity of the recording process, we've found that having just one person on the phone is really the only way to get a clear recording. Please let me know if one of you would be willing to be interviewed for the AJHG podcast and, if so, please email me the best time and the appropriate landline phone number on which we can call you. We look forward to hearing from you! Sincerely, Robin Robin Williamson, Ph.D., Deputy Editor, AJHG Speech Disorders: Stuttering is a disorder in which speech fluency can be severely compromised. The primary causes of stuttering are not clear, nevertheless, it is clearly that genetic susceptibility to stuttering is complex, multifactorial and heterogeneous. Dr. Riazuddin’s work (Riazuddin et al., Am. J. Hum. Gent. 2005) reported a rare example of significant linkage on chromosome 12 from a study on 46 stuttering, consanguineous family. Recently, Dr. Riazuddin’s work with Dr. Drayna, published in the “New England Journal of Medicine, 362(8):677-685, 2010” described an elegant study on genetic susceptibility to stuttering in a large consanguineous Pakistani family. After analyzing 45 genes in several affected persons, they zeroed in on a single nucleotide change (g3598A) in the GNPT gene. This variant predicts the substitution of lysine at a glutamic acid residue which is conserved across species and showed the clear evidence of co-segregation with stuttering in Pakistani family. This is the first example of clear experimental evidence for the involvement of a metabolic pathway in speech and that a mutation in the metabolic pathway affects the speech process. 22 This is indeed a unique finding published New England Journal of Medicine, 362(8):677-685, 2010 and invited editorial by Simon E. Fisher in the same editor of the journal. Development of New Methodologies: Dr. Riazuddin’s laboratory has successfully combined “Target Capture” and “Next Generation Sequencing” in the accelerated identification of new genes. The paper by Atteeq et al., (America Journal of Human Genetics 86: 378-88, 2010) describes this powerful methodology uniquely developed by combining the powers of SNP analysis, high throughput sequencing and gene capture. He successfully applied this methodology to identify DFNB 79 gene and demonstrated in unequivocal terms, how the impracticability of continuing hierarchical approach of sequencing exons of candidate genes can be successfully overcome in the selection of a candidate gene. He analyzed a 3Mb region of the DFNB79 interval on chromosome 9 which included 113 predicted and reported genes. This new and novel approach identified C9 or F75 designated TPRN as the mutated gene in nonsyndromic DFNB79. This has given birth to a new, rapid and effective methodology for gene identification and will greatly accelerate the pace of work in correlating linkages to new genes and their functions. This work is reported in American Journal of Human Genetics 86: 378-88, 2010 and the new strategy is being used in a number of labs including his own lab. Future Direction of Dr. Riazuddin Research: The above discoveries reported in high profile research journals during the last five years have raised a very important question that why does a single base change in the products of such genes as TRIC (Riazuddin et al., 2006), LRTOMT (Ahmad et al., 2008), HGF (Schultz, J.M., Khan, S.N., Ahmed, Z.M., Riazuddin, S., et al., 2009), and variant forms of GNPT and NAGPA enzymes (Kang, C., Riazuddin, S., Mundorff, J. et al., 2010) which exhibit nearly ubiquitous pattern of expression, only affect the hearing process and not other processes in the human body? Dr. Riazuddin has explained the phenomenon that the mutational change affects the stereoconfiguration of the protein such that it impairs only the specific function involved in hearing impairment. Dr. Riazuddin’s laboratory proposes to spend the next five years in finding an answer to this question. Simultaneously, efforts will continue for a sustained search for new and novel genes by combining the classical homozygosity mapping and the newly developed “Targeted Capture and Next Generation Sequencing” methods. The newly isolated genes will be studied for gene function through development of knockout model, immunocytochemistry and cellular localization by confocal microscope. During the last five year, Dr. Riazuddin has also addressed himself to preconditioning of stem cells. Stem cell transplantation is faced with the challenge of survival of transplanted cells in the ischemic tissue. The ischemic 23 tissue may not provide the nutrient and oxygen to the transplanted cells. Due to lack of nutrients, serum deprivation and ischemia, transplanted cells begin to die within hours after transplantation. Several strategies have been proposed to enhance the survival of the transplanted cells in the hostile ischemic environment and one of these strategies is pre-conditioning of stem cells. Various types of pre-conditioning strategies include: heat shock preconditioning, hypoxic/ischemic preconditioning, growth factor preconditioning, pharmacological preconditioning, genetic modulation of stem cells. Our main finding include preconditioning of BM derived MSCs with injured liver piece which resulted in enhanced homing and differentiation of preconditioned MSCs when transplanted in fibrotic liver model. Hence it provides an improved procedure for treatment of liver fibrosis. MSCs from diabetic animals are impaired in variety of cellular functions. IGF1+VEGF preconditioning of diabetes stressed MSCs showed up-regulation of prosurvival and down-regulation of apoptotic markers. These cells also demonstrated increased SOD activity, high in-vitro tube forming and chemotactic ability. Preconditioning of EPCs with diazoxide for 30minutes improved their survival against hypoxic injury. EPCs were preconditioned in three groups comprising of a) control group i.e. non preconditioned EPCs without exposure to H2O2 hypoxia, EPCs subjected to 200µM H2O2 hypoxic injury and DZ preconditioned EPCs exposed to 200µM H2O2 hypoxia. DZ preconditioned EPCs demontrated significantly reduced cell injury, apoptosis and expression of Caspase-3 and Gsk3β genes. Further, the DZ preconditioning of EPCs upregulated the expression of PI3 kinase, SDF1-α, VEGF, Bcl2 and PCNA genes. Pharmacological preconditioning of MSCs enhanced their survival and reduced apoptosis under invitro hypoxia. Further, the transplantation of preconditioned cells resulted in better recovery of renal function after ischemia in rats in comparison to non-preconditioned MSCs. In this study, MSCs were preconditioned in three different groups: Pharmacological preconditioned MSCs (SNAP), MSCs pretreated with pharmacological agent and its blocker (MB) and Blocker (MB) treated MSCs. SDF-1α preconditioning of insulin producing cells (IPCs) demonstrated improved secretion of insulin and proliferation in response to increasing concentrations of glucose. The preconditioned IPCs also demonstrated increased cell viability and reduced cell damage. 24 B. Development Works In 1981, Dr Riazuddin was selected member of a panel constituted by the United Nations Industrial Development Organization (UNIDO) to examine the implications of scientific and technological breakthroughs in genetic engineering and biotechnology in relation to future economic growth in developing countries. The panel included Professor R.H. Boyer (California, USA), S. Narang, (Ottawa, Canada), R. Wu, (Cornell, USA), A. Chakrabarty, (Chicago, USA), A. Bokhari, (New York, USA), Carl Heden (Stockholm Sweden) and Obaid Siddiqui (India). In this capacity, he contributed to the preparation of a proposal for the establishment of an International Centre for Genetic Engineering and Biotechnology (UNIDO publication No.IS 254). He also prepared a proposal for the establishment of Centres for Production of DNA Enzymes (UNIDO publication No.IS 271) and a paper on capability building in biotechnology and genetic engineering in developing countries (UNIDO publication No.IS 608). In 1982, he was selected a member of the International Working Group of Experts in Chemical Carcinogenesis and Related Discipline to evaluate the carcinogenic risk of some food additives, feed additives, and naturally occurring substances. As member of the expert working group, he contributed to the preparation of Vol.31 of the IARC monographs on the Evaluation of Carcinogenic Risk of Chemicals to Humans. He has organized training courses and workshops in Bangladesh, Malaysia and Tunisia to generate a cadre of specifically trained manpower. He has helped to establish training courses, group meetings, symposia and seminars in Indonesia, Malaysia, Saudi Arabia and Egypt. In order to promote the applications of biotechnology in the economic growth and development of Pakistan, and to build national capability in biotechnology, he conceived the establishment of an institution for advanced teaching and research in Molecular Biology that has emerged as one of the best places of teaching and research in molecular biology in the developing world. Young scientists from neighbouring developing countries come to spend sabbatical assignments to receive an exposure to modern approaches in molecular biology. As a consequence, he and his institution have helped several developing countries in building a cadre of specifically trained manpower. Dr. Riazuddin’s group has made outstanding contributions to extend the applications of his research both in agriculture and health related projects. He has cloned Bt genes in local elite varieties of cotton to breed insect resistance. Two cotton varieties with single and double Bt genes are in the national trials for eventual release to the farmer community. These works will a) help to boost our cotton production and b) cut down the use of chemical insecticides thus reducing the environmental burden of hazardous chemicals. 25 Dr. Riazudidn’s work on the cloning of human pharmaceutical protein genes such as interferon, erythropoietin, interlukin will undoubtedly contribute to improving health of the general public and simultaneously save huge foreign exchange. His group has cloned human interferon alfa-2a genes in E. coli, purified the protein at semi-commercial levels and used the purified products in 3miu injections which are waiting permission of the Ministry of Health to conduct clinical trials. Hepatitis is a dreadful disease and number one killer disease in Pakistan. Nearly 10% of the population is career of hepatitis virus and the import value of interferon has increased from 1.1 billion in 2005 to 1.4 billion in 2006, 1.87 billion in 2007 and 2.3 billion in 2008 and over 3.00 billion in 2009. The local production will help to save foreign exchange and simultaneously contribute to health of the general public thus eventually making Pakistan a “hepatitis free country”. His work on Bt cotton, interferon and PCR-based diagnostic procedures has been patented to give this intellectual property due legal protection. 26 PUBLICATIONS BY PROF. S. RIAZUDDIN National Publications = 57 International Publications = 197 Total Publications = 254 Impact Factor = 896.287 NATIONAL PUBLICATIONS S.N. Impact Factor Citations 1. Shah,F.H., Riazuddin, S. and Salam, A. (1967). Effect of heat on the digestibility of leaf proteins. Pak. J. Sci. Ind. Res. 10: 39-41. N.A. N.A. 2. Riazuddin, S. (1974). Multi-compartmental analysis of calcium kinetics in sheep. I. Formulation of a four compartmental model. Pak. J. Biochem. 7: 5-9. N.A. N.A. 3. Riazuddin, S. (1974). A model for plasma calcium pools. Pak. J. Biochem., 7: 77-80. N.A. N.A. 4. Riazuddin, S., Shakoori, A.R. and Nawaz, Z. (1986). Mutagenicity testing of some children's consumables. Pak. J. Zool., 18 (3): 317-326. N.A. N.A. 5. Neelam, M., Nawaz. Z., Shakoori, A.R. and Riazuddin, S. (1987). Isolation and characterization of R-plasmids from antibiotic resistant bacterial strains collected from a local hospital. Pak. J. Zool., 19(1): 17-26. N.A. N.A. 6. Shakoori, A.R., Akhtar, R., Nawaz, Z. and Riazuddin, S. (1987). Isolation and biochemical characterization of Rhizobium species collected from Lahore. Pak. J. Zool., 19(2): 185-191. N.A. N.A. 7. Neelam, M., Nawaz, Z. and Riazuddin, S.(1987). Hydrocarbon Biodegradation: Biochemical characterization of bacteria isolated from local soils. Pak. J. Sci. & Ind. Res., 30(5): 382-385. N.A. N.A. 8. Riazuddin, S. and Ahmed, Z. (1987). A non-pyrimidine dimer UV-damage specific endonuclease. I. Isolation and purification. Pak. J. Zool. 19 (2): 193-209. N.A. N.A. 9. Riazuddin, S., Athar, A. and Shakoori, A.R. (1987). A non-pyrimidine dimer UVdamage specific endonuclease. II. Mechanism of action. Pak. J. Zool. 19 (3): 217230. N.A. N.A. 10. Riazuddin, S., Sohail, A., Maqbool, T., Khan, E. and Mushtaq, R. (1987). Presence of new Type-II specificity restriction enzymes in local bacteria. Pak. J. Sci. & Ind. Res. 30 (11): 819-824. N.A. N.A. 11. Athar, A., Riazuddin, S. and Lali, S.M. (1987). Self methylation of correctional transferases during repair of O6 methyl guanine, O4 methyl thymine and methyl phosphotriesters. Pak. J. Zool. 19 (4): 413-424. N.A. N.A. 12. Riazuddin, S., Sohail, A., Nawaz, Z., Mushtaq, R. and Shakoori, A. R. (1987). Isolation of a temperate bacteriophage OR7 specific for Pseudomonas aeruginosa. Pak. J. Zool. 19 (4): 425-435. N.A. N.A. 13. Sohail, A., Amjad, M., Shakoori, A.R. and Riazuddin, S. (1987). An improved method for isolation of covalently closed circular DNA from ox174am3 phage. Pak. J. Zool. 19(4): 407-412. N.A. N.A. 14. Sohail, A., Mushtaq, R., Khan, E., Maqbool, T. and Riazuddin, S. (1987). Discovery of two new Type-II restriction enzymes. Pak. J. Zool. 19(4): 371-391. N.A. N.A. 27 15. Riazuddin, S., Athar, A., Sohail, A. and Ahmad, Z. (1987). Molecular mechanism of host controlled Restriction and Modification in Haemophilus influenzae. I. Isolation of restriction positive mutant. Pak. J. Zool. 19(4): 393-405. N.A. N.A. 16. Robin, S.P. Ghauri, M.A., Jabeen, F., Riazuddin, S. and Shams, F.A. (1987). Isolation and characterization of acidophilic bacteria from the local environment. Pb. Univ. J. Zool., 2: 1-9. N.A. N.A. 17. Riazuddin, S., Husnain, T., Malik, T., Farooqi, H. and Abbas, T. (1988). Establishment of Callus-Tissue Cultures and the induction of organogenesis in Chick pea (Cicer arietinum L.). Pak. J. Agri. Res., 9: 339-345. N.A. N.A. 18. Riazuddin, S. and Ahmad, Z. (1988). Formation of homopyrimidine dimer during UV irradiation of drug bound DNA. Pak. J. Phar. 1 (1 & 2): 1-8. N.A. N.A. 19. Athar, A. Shakoori, A.R. and Riazuddin, S. (1988). Partial purification of O2-MeTGlycosylase enzyme induced during chemical adaptation of M. luteus. Pak. J. Zool., 2(20): 159-172. N.A. N.A. 20. Butt, A.I., Riazuddin, S., Shakoori, A.R. and Jabeen, F. (1988). Isolation and identification of petroleum hydrocarbon degrading bacteria from the local environment. Pak. J. Zool., 20(4): 391-399. N.A. N.A. 21. Farooqi, H., Islam, I., Haider, H. and Riazuddin, S. (1990). Tissue culture of chickpea and its transformation by Agrobacterium tumefaciens. Prof. Intl. Telecommunication Symposium on Plant Biotechnology, Islamabad, Pakistan, p.39. N.A. N.A. 22. Khan, E. Mateen, A., Rubin, S., Karim, S., Makhdoom, R., Sohail, A. and Riazuddin, S. (1994). Entomocidal activity of local isolates of B. thuringiensis. Pak. J. Agri. Res. 15: 297-301. N.A. N.A. 23. Humera, F., Malik T., Islam, R. and Riazuddin, S. (1994). Tissue culture of chickpea and its transformation by Agrobacterium tumefaciens. Pak.J. Agri. Res. 15: 317-319. N.A. N.A. 24. Khan, S.N., Zafar, A.U. and Riazuddin, S. (1995). Molecular Genetic diagnosis of thalassemia in Pakistan. J. Pak. Med. Asso. 45(3): 66-70. N.A. N.A. 25. Husnain, T., Khanum, F. ,Riazuddin, S. and Gordon, M.P. (1995). Transformation of Basmati rice (Oryza sativa Linn) with bacterial genes by particle bombardment. Pak. J. Plant Sci. 1(2): 219-228. N.A. N.A. 26. Khan, E., Makhdoom R. Karim, S. and Riazuddin, S. (1993). Entomocidal activity of indigenous Bt isolates against two important rice pests, Tryporyza incertulus and Cnaphalocrocis medinalis. Proceedings of International Symposium on Biotechnology for sustainable development, Dec. 15-20, 1993, NIBGE, Faisalabad, Pakistan. N.A. N.A. 27. Khan, E., Karim, S., Makhdoom, R., and Riazuddin, S. (1995). Abundance, distribution and diversity of Bacillus thuringiensis in Pakistanian environment. Pak. J. Sci. Ind. Res. 38(5-6): 192-195. N.A. N.A. 28. Khan S.N., Zafar, A.U. and Riazuddin, S. (1995). Molecular genetic diagnosis of thalassemia in Pakistan. J. Pak. Med. Assoc. 45(3): 66-70. N.A. N.A. 29. Husnain, T. Riazuddin, S. (1996). Transformation of Gossypium hirsutum variety MNH93 with insect resistant gene. Proceedings of First Workshop on the Management of Cotton Leaf Curl Virus "March 11-12, 1996. N.A. N.A. 30. Karim, S. and Riazuddin S. (1997). Bacillus thuringiensis delta-endotoxins: Molecular mechanism of action and pest management. Pak. Acad. Sci. 34(2): 135-155. N.A. N.A. 31. Makhdoom, R., Karim, S. and Riazuddin S. (1997). Pathogenicity of locally isolated Bacillus thuringiensis delta-endotoxins against Earias vitella and Helicoverpa armigera. N.A. N.A. 28 Pak. Entomol. 19 (1-2): 1-7 32. Karim, S., Makhdoom, R. and Riazuddin S. (1997). Specificity and pesticidal activity of Pakistani isolates of Bacillus thuringiensis towards Pectinophora gossypiella. Pak. Entomol. 19(1-2): 22-26. N.A. N.A. 33. Khanum, F., Husnain, T., Riazuddin, S. and Gordon, M.P. (1997). regeneration of Basmati rice. Pak. J. Biochem. 30: 22-26. In vitro N.A. N.A. 34. Karim, S. and Riazuddin S. (1998). A new soybean diet for the rearing of cotton pink bollworm (Pectinophora gossypiella). Pak. Entomol. 19(1-2): 31-38. N.A. N.A. 35. Haris, W.A.A., Husnain, T., Riazuddin, S. (1998). Transformation of cotton (Gossypium hirsutum L) insect resistance gene by particle bombardment and agrobacterium. Pak. J. Biol. Sciences 1(3): 170-174. N.A. N.A. 36. Husnain, T., Khanum, F., Fatima, T., Khan, E., Riazuddin, S. and Altosaar, I. (1998). Transforamtion of indica rice with synthetic Cry1A(c) Gene. Biologia 44(1&2): 180192. N.A. N.A. 37. Idrees, M., Bhattti, A.H., Khan, S.U. and Riazuddin, S. (1998). Drug Resistance in Mycobacterium tuberculosis isolated from a group of patients referred to PMRC Research Centre at Mayo Hospital, Lahore, Pakistan. Pak. J. Zool. 30: 335-339. N.A. N.A. 38. Malik, K., Butt, A. and Riazuddin, S. (1998). Toxicity of Bacillus thuringiensis strains to the cotton aphid, Aphis gossypii (Homoptera : Aphidiae). Punjab Univ. J. Zool., 13: 191-194. N.A. N.A. 39. Shahid A.A., Latif, Z. and Riazuddin, S. (1998). Comparison of phytotoxin(s) production among two isolates of Ascochyta rabiei varying in virulence. Pak. J. Pl. Sci., 4(1): 1-11. N.A. N.A. 40. Chaudhry, B. and Riazuddin, S. (1998). Cloning and expression Micrococcus luteus glycosylase repair genes in E. coli. Pak J. Biochem. and Mol. Bio: 31: 29-43. N.A. N.A. 41. Karim, S. and Riazuddin, S. (1999). Rice insect pests of Pakistan and their control: A lesson from past from sustainable future integrated pest management. Pak. J. Biol. Sci. 2(2): 261-276. N.A. N.A. 42. Karim, S. Murtaza, M. and Riazuddin, S. (1999). Field evaluation of Bacillus thuringiensis, insect growth regulators, chemical pesticide against Helicoverpa armigera (Huber) LepidopteraL Noctuidae) and their compatibility for integrated pest management. Pak. J. Biol. Sci. 2(2): 320-326. N.A. N.A. 43. Rizwana A., Karim, S. and Riazuddin S. (1999). Entomocidal activity of Bacillus thuringiensis transgenic rice plants against rice leaf-folder, Cnaphalocrocis medinalis (Lepidoptera: Pyralidae). Pak. J. Biol. Sci. 2(4): 1472-1477. N.A. N.A. 44. Zafar, A.U., Karim, S., Nasir, I.A. and Riazuddin, S. (2000). Shelf life and field evaluation of CAMB Bacillus thuringiensis Biopesticide against Helicoverpa armigera (Hubner) (Lepidoptera: noctuidae) on Tomato. Pak. J. Biol. Sci. 3(5): 804-807. N.A. N.A. 45. Karim, S., Zafar, A.U., Nasir, I.A. and Riazuddin, S. (2000). Field Efficcacy of CAMB Bacillus thuringiensis to Control Helicoverpa armigera (Hubner) and Earias vitella (Fabricius) in Okra Crop. Pak. J. Biol. Sci. 3(8): 1296-1298. N.A. N.A. 46. Noor, S. Husnain, T. and Riazuddin, S. (2000) Screening of putative transgenic rice and cotton plants: a simple and easy method. Pak. J. Biological Sciences 3: 591593. N.A. N.A. 47. Malik, K., Mahmood, T. and Riazuddin, S. (2001). The receptor for Bacillus thuringiensis Cry 1Ac delta-endotoxin in the Brush Border Membrane of the N.A. N.A. 29 Lepidopteran Hlicoverpa armigea in Aminopeptidase N. J. Biol. Sci. 1(8): 782-84. 48. Khan. M.A. Makhdoom, R., Husnain, T. Malik, K. Latif, Z. Altosaar, I. and Riazuddin, S. (2001) Expression of Bt gene in a dicotyledonous plant under a promoter derived from monocotyledonous plant. Pak. J. Biol. Sciences 4(12): 1518-1522. N.A. N.A. 49. Husnain, T., Bokhari, S.M. Riaz, N., Fatima, T., Shahid, A.A., Bashir K., Jan, A. and Riazuddin, S. (2003). Pesticidal genes of Bacillus thuringiensis in transgenic rice technology to breed insect resistance. Pak. J. Biochem. Mol. Biol. 36(2): 133-142 N.A. N.A. 50. Mahmood, N., Ali, R.M., Husnain, T., Hussain, S.S., Majeed, A. and Riazuddin, S. (2003). Biolostic transformation of Gossypium hirsutum L variety CIM-482 with cry1Ac gene gene under wound inducible promoter Pakistan. Pak. J. Biochem. Mol. Biol. 36(2): 146-157. N.A. N.A. 51. Ali, R.M., Husnain, T., Hussain, S.S., Mahmood N. and Riazuddin. S. (2004). Multiple Shoot Regeneration Response of Recalcitrant Cotton (Gossypism hirsutum L.) Cultivar CIM-443. Pak. J. Biol. Sci. 7(8): 1371-75. N.A. N.A. 52. Bashir, K., Husnain, T. and Riazuddin, S. (2004) Response of transgenic rice expressing two Bt genes to nontarget insects. IRRN 29(2):15-16. N.A. N.A. 53. Rasheed, S., Fatima, T., Husnain, T., Bashir, K., Riazuddin, S. (2005). RAPD characterization of somaclonal variation in indica basmati rice. Pak. J. Bot., 37(2): 249-262 0.106 N.A. 54. Malik, K., Riazuddin, S.A., and Riazuddin, S. (2006). Identification, purification, cloning and expression of a novel receptor for Bacillus thuringiensis Cry1A deltaendotoxins in the brush border membranes of the Helicoverpa armigera (Lepidoptera: Noctuidae). Pak. J. Bot., 38(3): 767-778. 0.106 N.A. 55. Malik, K. and Riazuddin, S. (2006). Immunoassay-based approach for detection of novel Bacillus thuringiensis delta-endotoxins, entomocidal to cotton aphids (Aphis gossypii) and whiteflies (Bemisia tabaci). Pak. J. Bot., 38(3): 757-765 0.106 N.A. 56. Hussain, S.S., Husnain, T. and Riazuddin, S. (2007). Sonication assisted Agrobacterium mediated transformation (SAAT): An alternative method for cotton transformation. Pak. J. Bot., 39(1): 223-230. 0.106 N.A. 57. Latif, Z., Idrees, A.N. and Riazuddin, S. (2007). Indigenous production of synthetic seeds in Daucus carota. Pak. J. Bot., 39(3): 849-855. 0.106 N.A. Total: 0.530 30 INTERNATIONAL PUBLICATIONS S.N. Impact Factor Citations 1. Braithwaite, G.D., Glascock, R.F. and Riazuddin, S. (1969). Calcium metabolism in lactating ewes. Br. J. Nutr., 23: 827-834. 2.708 65 2. Braithwaite, G.D., Glascock, R.F. and Riazuddin, S. (1970). Calcium metabolism in pregnant ewes. Br. J. Nutr., 24: 661-670. 2.708 71 3. Braithwaite, G.D. and Riazuddin, S. (1971). The effect of age and level of dietary calcium intake on calcium metabolism in sheep. Br. J. Nutr., 26: 215-225. 2.708 69 4. Green, M.H.L., Bridges, B.A. and Riazuddin, S. (1971). Effect of gamma radiation on the donor ability of recA and recA+strains of Escherchia coli. J. Gen. Microbiol., 67: 63-68. 0.766 4 5. Braithwaite, G.D., Glascock, R.F. and Riazuddin, S. (1972). Studies on the transfer of calcium across the ovine placenta and incorporation into the foetal skeleton. B. J. Nutr., 27: 417-424. 2.708 26 6. Braithwaite, G.D., Glascock, R.F. and Riazuddin, S. (1972). Effect of hexoestrol on calcium metabolism in the sheep. Br. J. Nutr., 28: 269-273. 2.708 15 7. Riazuddin, S. and Muhammad, A. (1974). Transfer of pyrimidine dimers during bacterial conjugation. Photochem. Photobiol., 19: 169-172. 2.061 0 8. Riazuddin, S. and Grossman, L. (1977). Micrococcus luteus correndonucleases. I. Resolution and purification of two endonucleases specific for DNA containing pyrimidine dimers. J. Biol. Chem., 252 (18): 6280-6286. 5.808 84 9. Riazuddin, S. and Grossman, L. (1977). Micrococcus luteus correndonucleases. II. Mechanism of action of two endonucleases specific for DNA containing pyrimidine dimers. J. Biol Chem., 252 (18): 6287-6293. 5.808 26 10. Riazuddin, S. and Grossman, L. (1977). Micrococcus luteus correndonucleases. III Evidence for involvement in repair in vitro of two endonucleases specific for DNA containing pyrimidine dimers. J. Biol. Chem., 252 (18): 6294-6298. 5.808 16 11. Riazuddin, S. and Lindahl, T. (1978). Isolation of a DNA glycosylate enzyme. Mutation Res., 47: 167-168. 4.111 12. Riazuddin, S. and Lindahl, T. (1978). Properties of 3-methyladenine DNA glycosylase from Escherchia coli. Biochem., 17: 2110-2118. 3.633 13. Riazuddin, S. and Grossman, L. (1978). Purification of a damage specific endonuclease. Mutation Res., 47: 165-166. 4.111 14. Grossman, L., Riazuddin, S., Haseltine, W. A. and Lindan, C. (1978). Nucleotide excision repair of damaged DNA . CHS Symp. Quant. Biol., 43: 947-955. 0.896 15. Riazuddin, S. (1980). Purification and properties of pyrimidine dimer endonucleases from Micrococcus luteus. Methods Enzymol., 65: 185-191. specific 1.640 16. Riazuddin, S. (1980). Purification and properties of an endonuclease specific for nonpyrimidine dimer damage induced by ultraviolet radiations. Methods Enzymol. 65: 231235. 1.640 31 166 25 17. Riazuddin, S. (1980). Purification and properties of a 3-methyladenine DNA glycosylase from Escherchia coli. Methods Enzymol., 65: 290-295. 1.640 18. Riazuddin, S., Athar, A. and Ahmed, Z. (1982). Repair of alkylation damages in M. luteus. "Proceeding of Int'l. Meeting on Inducible Repair, Tolouse, France." N.A 19. Athar, A., Ahmad, Z. and Riazuddin, S. (1984). Adptive response of M. luteus to alkylating chemicals. Nucleic Acids Res., 12(4): 2111-2126. 6.317 27 20. Riazuddin, S., Athar, A. and Saffhil, R. (1985). Chemical adaptation of M.luteus induces repair functions for O-alkylated DNA pyrimidines. Nucleic Acids Res., 13 (19): 7153-7166. 6.317 4 21. Riazuddin, S., Malik, M.M. and Nasim, A. (1987). Mutagenicity testing of some medicinal herbs. Environ Mol Mutagen., 10: 141-148. 2.653 4 22. Riazuddin, S., Athar, A.,Ahmed, Z., Lali, S.M. and Sohail, A. (1987). DNA glycosylase enzymes induced during chemical adaptation of M. luteus. Nucleic Acids Res., 15 (16): 6607-6624. 6.317 4 23. Riazuddin, S., Athar, A. and Sohail, A. (1987). Methyltransferases induced during chemical adaption of M. luteus. Nucleic Acid Res., 15 (22): 9471-9486. 6.317 6 24. Riazuddin, S. (1988). Development of training programmes in biotechnology safety and risk assessment. BioEssays, 9(4): 131-132. 5.965 0 25. Riazuddin, S. (1988). Repair of Alkylated DNA in M. luteus. Proceedings of the Second Italy-Japan Joint Seminar on Biological Sciences. pp.70-71. N.A 26. Riazuddin, S., and Nasim, A., (1989). Future growth in biotechnology in the developing countries. Genome, 31(2):1042-5. 1.972 27. Islam, R., and Riazuddin, S. (1992). Induction of tumor formation in chickpea tissue by treatment with Agrobacterium tumefaciens. Bangladesh J. Microbiology, 9: 31-33 N.A 28. Islam, R., and Riazuddin, S. (1992). In vitro induction of roots in chickpea by Agrobacterium rhizogenes. Plant Tissue Culture (Bangladesh), 2: 135-137. 0.631 29. Islam, R. and Riazuddin, S. (1992). Transformation of chickpea tissue by A. tumefaciens in ex-vitro conditions. International Chickpea Newsletter, 26: 11-12. N.A 30. Latif, Z., Strange, R.N., Bilton, J. and Riazuddin, S. (1993). Production of the phytotoxins, solanapyrones A and C and cytochalasin D among none isolates of Ascochyta rabiei. Plant Pathol., 42: 172-180. 2.198 8 31. Mushtaq, R., Naeem, S., Sohail, A. and Riazuddin, S. (1993). BseRI a novel restriction endonuclease from a Bacillus species which recognizes the sequence 5'....GAGGA....3'. Nucl. Acids Res., 21: 3585. 6.317 0 32. Islam, R. and Riazuddin, S. (1993). Virulence of Agrobacterium tumefaciens on chickpea (Cicer arietinum L.). Bangladesh J. Botany, 22(2): 233-236. 0.048 0 33. Islam, R., Farooqi, H. and Riazuddin, S. (1993). In vitro organogenesis of chickpea and its transformation by Agrobacterium tumefaciens. Plant Tissue Culture (Bangladesh), 3(1): 29-34. 0.631 34. Islam, R. and Riazuddin, S. (1993). Effect of genotype and age of seedling on compatible reaction between chickpea and Agrobacterium rhizogenes. Bangladesh J. Microbiology, 10: 29-32. N.A 35. Islam, R. and Riazuddin, S. (1993). Shoot organogenesis in chickpea (Cicer arietinum L.). J. Bioscience, 1: 1-5. 0.966 32 0 36. Islam, R. and Riazuddin, S. (1993). In vitro rooting on micropropagated shoots of chickpea. International Chickpea Newsletter, 29: 21-23. N.A 37. Islam, R. and Riazuddin, S. (1993). Isolation of genomic DNA from in vitro grown chickpea (Cicer arietinum L.) tissues. International Chickpea Newsletter, 29: 23-25. N.A 38. Islam, R., Malik, T., Husnain, T. and Riazuddin, S. (1994). Strain and cultivar specificity in the Agrobacterium-chickpea interaction. Plant Cell Reports, 13: 561-563. 1.727 39. Islam, R. and Riazuddin, S. (1994). Influence of genotype and age of seedlings on chickpea response to Agrobacterium tumefaciens. International Chickpea Newsletter, 1: 23-25. N.A 40. Islam,R. and Riazuddin, S. (1994). Chages in protein, RNA and DNA content of in vitro propagated calli of chickpea (Cicer arietinum L). Bangladesh J. Bot. 24: 87-89. N.A 41. Riazuddin, S., Husnain, T., Khan, E. and Khanum, F. (1995). Insect resistant transgenic Basmati rice. Rice Biotechnology Quarterly, 23: 7-8. N.A 42. Islam, R., Farooqui, H. and Riazuddin, S. (1995). Clonal propagation from seedling nodes and shoot apices of chickpea (Cicer arietinum L.). Plant Tissue Culture (Bangladesh) 5(1): 53-58. N.A 43. Husnain, T., Malik, T., Riazuddin, S. and Gordon. M.P. (1997). Studies on the expression of marker genes in chickpea. Plant Cell Tiss. Org., 49: 7-16. 0.951 8 44. Khan, S.N. and Riazuddin, S. (1998). Molecular Characterization of -thalassemia in Pakistan. Hemoglobin, 22(4): 333-345. 0.843 6 45. Khanum, F., Husnain, T. and Riazuddin, S. (1998). Effect of age of seedling and phytohormones on micropropagation of indica rice (oryza sativa L.) from meristem culture. J. Plant Biol,. 41(2): 93-96. 0.670 46. Karim, S., Nasreen, Z., Malik, K. and Riazuddin, S. (1998). A simple and fast method for mass rearing of sweet potato whitefly (Bemisia tabaci) and cotton aphid (Aphis gossypii) in contained conditions. Asia Life Science, 7(1): 103-108. N.A 47. Maqbool, S., Husnain, T., Riazuddin, S., Masson, L. and Christou, P. (1998). Effective control of yellow stem borer and rice leaf-folder in transgenic rice indica varieties Basmati 370 and M7 using the novel delta-endotoxin cry2A Bacillus thuringiensis gene. Mol. Breed., 4(6): 501-507. 2.357 48. Islam, R., Farooqui, H. and Riazuddin, S. (1998). In vitor genotype phytohormone interaction in chickpea. Plant Tissue Culture (Bangladesh) 8(2): 173-175. N.A 49. Islam, R., Farooqui, H. and Riazuddin, S. (1999). Improved efficiency in chickpea tissue culture: Effects of presoaking and age of explants on in vitro shoot proliferation. Intl. chickpea & Pigeonpea Newslet. (India) 6: 36-37. N.A 50. Karim, S., Malik, K., Zafar, U. and Riazuddin, S. (1999). Evaluation of Pakistanian Bacillus thuringiensis isolates Scirpophaga incertulas and Cnaphalocrocis medinalis. J. Asia Pacific Entomol., 2(1): 61-67. N.A 51. Karim, S., Malik, K., Zafar, U. and Riazuddin, S. (1999). Efficacy of activated toxins from Pakistanian Bacillus thuringiensis isolates to rice yellow stem borer (Scirpophaga incertulas) and leaf folder (Cnaphalocrocis medinalis). J. Asia Pacific Entomol., 2(1): 1-7. N.A 52. Karim, S., Riazuddin, S., and Dean, D.H. (1999). Interaction of Bacillus thuringiensis deltaendotoxins with midgut brush border membrane vesicles of Helicoverpa armigera. J. Asiapacific Entomol., 2(2): 153-162. N.A 33 5 28 53. Chaudhry, B. Yasmeen, A., Husnain, T. and Riazuddin, S. (1999). Mini-scale genomic DNA extraction from cotton. Plant Molecular Biology Reporter (17): 1-7. 0.625 0 54. Karim, S., Riazuddin, S., Gould, F. and Dean, D.H. (2000). Determination of receptor binding properties of Bacillus thuringiensis delta-endotoxins to cotton bollworm (Helicoverpa zea) and pink bollworm (Pectinophora gossypiella) midgut brush border membrane vesicles. Pesticide Biochem. Physiol., 67(3): 198-216 1.189 11 55. Friedman, T.B., Battey, J., Kachar, B., Riazuddin, S., Noben-Trauth, K., Griffith, A. and Wilcox, E.R. (2000). Modifier genes of hereditary hearing loss. Current Opinion in Neurobiology, 10: 487-493. 9.286 20 56. Majeed, A., Husnain, T. and Riazuddin, S. (2000). Transformation of Virus Resistant Genotype of Gossypium hirsutum L., with Pesticidal Gene. Plant Biotech., 17(2): 105-110. N.A 57. Riazuddin, S., Castlelein, C.M., Ahmad, Z.M., Lalwani, A.K., Mastroianni, M.A., Naz, S., Smith, T.N., Liburd, N.A., Friedman, T.B., Griffith, A.J., Riazuddin, S., Wilcox, E.R. (2000). Dominant modifier DFNM1 suppresses recessive deafness DFNB26. Nat. Genet., 26: 431434. 25.556 48 58. Khan, S.N., Riazuddin, S. and Galanello, R. (2000). Identification of three rare Thalassemia mutations in the Pakistani Population. Hemoglobin, 24(1): 15-22. 0.516 7 59. Khan, S.N., Riazuddin, S., Butt, F.I. and Galanello, R. (2000). Hb Sallanches [alpha 104(G11)Cys -> Tyr]: a rare alpha 2-globin chain variant found in the homozygous state in three members of a Pakistani family. Hemoglobin, 24(1): 31-35. 0.843 4 60. Old, J., Khan, SN., Verma, I., Fucharoen, S., Kleanthous, M., Iaonnou, P., Kotea, N., Fisher, C., Riazuddin, S., Saxena, R., Winichagoon, P., Kyriacov, K., Quobaili, FA., and Khan, B. (2001). A multi-centre study in order to define further the molecular basis of thalassemia in Thailand, Pakistan, Sri Lanka, Mauritius, Syria and India and to develop a simple molecular diagnostic strategy by ARMS-PCR. Hemoglobin, 25(4): 397-407. 0.843 12 61. Bork, J.M., Peters, L.M., Riazuddin, S., Bernstein, S.L., Ahmed, Z.M., Ness, S.L., Polomeno, R., Ramesh, A., Schloss, M., Srisailpathy, C.R., Wayne, S., Bellman, S., Desmukh, D., Ahmed, Z.M., Khan, S.N., Kaloustian, V.M., Li, X.C., Lalwani, A., Riazuddin, S., Bitner-Glindzicz, M., Nance, W.E., Liu, X.Z., Wistow, G., Smith, R.J., Griffith, A.J., Wilcox, E.R., Friedman, T.B. and Morell, R.J. (2001). Usher syndrome 1D and nonsyndromic autosomal recessive deafness DFNB12 are caused by allelic mutations of the novel cadherin-like CDH23. Am. J. Hum. Genet., 68: 26-37. 11.092 154 62. Wilcox, E.R., Burton, Q.L., Naz, S., Riazuddin, S., Smith, T.N., Ploplis, B., Belyantseva, I., Ben-Yosef, T., Liburd, N.A., Morell, R.J., Kachar, B., Wu, D.K., Griffith, A.J., Riazuddin, S., and Friedman, T.B. (2001). Mutations in the Gene Encoding Tight Junction cladin-14 Cause Autosomal Recessive Deafness DFNB29. Cell, 104: 165-172. 29.194 139 63. Maqbool, S.B., Riazuddin, S., Loc, N.T., Gatehouse, A.M.R., Gatehouse, J.A. and Christou, P. (2001). Expression of multiple insecticidal genes confers broad resistance against a range of different rice pests. Mol. Breed., 7: 85-93. 2.357 46 64. Ben-Yousef, T, Wattenhofer, M., Riazuddin, S., Ahmed, Z.M., Scott, H.S., Kudoh, J., Shibuya, K., Antonarakis, S.E., Bonne-Tamir, B., Radhakrishna, U., Naz, S., Ahmad, Z., Riazuddin, S., Pandya, A., Nance, W.E., Wilcox, R.R., Friedman, T.B. and Morell, R.J. (2001). Novel mutations of TMPRSS3 in four DFNB8/B10 families segregating congenital autosomal recessive deafness. J. Med. Genet., 38(6): 396-403. 5.535 18 65. Ahmed, Z.M., Riazuddin, S., Bernstein, S.L., Ahmad, Z., Khan, S.N., Griffith, A.J., Morell, R.J., Friedman, T.B., Riazuddin, S. and Wilcox, E.R. (2001). Mutations of Protocadherin Gene PCDH15 Cause Usher Syndrome Type 1F. Am. J. Hum. Genet., 69(1): 25-34. 11.092 108 34 66. Liburd. N., Ghosh. M., Riazuddin, S., Naz, S. Khan, SN., Ahmed, Z., Riazuddin, S., Liang, Y., Menon, PSN., Smith, T., Smith, ACM., Chen, KS., Lupski, JR., Wilcox, ER., Potocki, L and Friedman, TB. (2001). Novel mutations MY015A associated with profound deafness in consanguineous families and moderately-severe hearing loss in a smith-Magenis syndrome subject. Hum. Genet., 109: 535-541. 3.974 67. Friedman, T.B., Hinnat, J.T., Ghosh, M., Boger, E.T., Riazuddin, S., Lupski, J.R., Potocki, L., Wilcox, E.R. (2002). DFNB3, Spectrum of MYO15A recessive mutant allele and an emerging genotype-phenotype correlation. Adv. Otolaryyngol., 61: 124-130. 0.346 68. Bork, J.M., Morell, R.J., Khan, S., Riazuddin, S., Wilcox, E.R., Friedman, T.B. and Griffith, A.J. (2002). Clinical presentation of DFNB12 and Usher Syndrome Type 1D. Adv. Otorhinolaryngol., 61: 145-152. 0.346 69. Ahmed, Z.M., Riazuddin, S., Friedman, T.B., Riazuddin, S., Wilcox, E.R. and Griffith, A.J. (2002). Clinical Manifestations of DFNB29 Deafness. Adv. Otolaryyngol., 61: 156-160. 0.346 70. Riazuddin, S., Ahmed, Z.M, Friedman, T.B., Griffith, A.J. Riazuddin, S. and Wilcox, E.R. (2002). Genetic Modifiers of Hereditary Hearing Loss. Adv. Otolaryyngol., 61: 224–229. 0.346 71. Husnain T., Asad, J., Maqbool, S.B., Datta, S.K. and Riazuddin, S. (2002). Variability in expression of insecticidal Cry1Ab gene in Indica Basmati rice. Euphytica, 128: 121-128. 0.907 11 72. Kurima K, Yang Y, Riazuddin S, Ahmed Z, Naz S, Mo J, Makishima T, Ghosh M, Menon SN, Deshmukh D, Oddoux C, Ostrer H, Khan S, Riazuddin S, Hampton LL, Battey JF Jr, Wilcox ER, Friedman TB, and Griffith AJ (2002) Dominant and recessive deafness caused by mutations of a novel gene, TMC1, required for cochlear hair-cell function. Nature Genetics. 30:277-84. 25.556 55 73. Ahmed, Z.M., Smith, T.N., Riazuddin, S., Makishima, T., Ghosh, M., Bokhari, S., Menon, S.N.P., Deshmukh, D., Griffith, A.J., Riazuddin, S., Friedman, T.B. and Wilcox, E.R. (2002) Nonsyndromic recessive deafness DFNB18 and Usher Syndrome Type 1C are allelic mutations of USH1C. Hum. Genet., 110: 527-531. 3.974 37 74. Astuto, L.M., Bork, J.M., Weston, M.D., Askew J.W., Fields, R.R., Orten, D.J., Ohliger S.J., Riazuddin, S, Morell, R.J., Khan, S., Riazuddin, S., Kremer, H., Hauwe P.V., Moller C.G., Cremers C. W. R. J., Ayuso C. J., Heckenlively R., Rohrschneider K., Spandau U., Greenberg J., Ramesar R., Reardon W., Bitoun P., Millan J., Legge R., Friedman T.B., and Kimberling W.J (2002). CDH23 Mutations and Phenotype Heterogeneity: Profile of 107 Diverse Usher Syndrome and Non-Syndromic Deafness. Am. J. Hum. Genet,. 71(2): 262275. 11.092 33 75. Naz S, Giguere CM, Kohrman DC, Mitchem KL, Riazuddin S, Morell RJ, Ramesh A, Srisailpathy S, Deshmukh D, Riazuddin S, Griffith AJ, Friedman TB, Smith RJH, Wilcox E R (2002). Mutations in a Novel Gene, TIME, are associated with hearing loss linked to the DFNB6 locus. Am. J. Hum. Genet., 71: 632-636. 11.092 20 76. Chaudhry, G.R., Mateen, A., Kaskar, B., Bloda, M. and Riazuddin, S. (2002). Purification and Biochemical Characterization of the Carbamate Hydrolase from Pseudomonas sp.50432. Biotch. and App. Biochem., 36: 63-70. 1.903 4 77. Park HJ, Shaukat S, Liu XZ, Hahn SH, Naz S, Ghosh M, Kim HN, Moon SK, Abe S, Tukamoto K, Riazuddin S, Kabra M, Erdenetungalag R, Radnaabazar J, Khan S, Pandya A, Usami SI, Nance WE, Wilcox ER, Riazuddin S, Griffith AJ (2003). Origins and frequencies of SLC26A4 (PDS) mutations in east south Asians: global implications for the epidemiology of deafness. J. Med. Genet., 40: 242-248. 5.535 42 78. Ahmed, Z.M., Riazuddin, S., Riazuddin, S., Wilcox, E.R. (2003). The molecular genetics of Usher Syndrome. Clinical Genet., 63: 431-444. 3.181 49 35 27 79. Ahmed, Z.M, Morell, R.J., Riazuddin, S., Gropman, A., Shaukat, S., Ahmad, A.A., Mohiddin, S.A., Fananapazir, L., Caruso, R.C., Husnain, T., Khan, S.N., Riazuddin, S., Griffith, A.J., Friedman, T.B. and Wilcox, E.R. (2003). Mutations of MYO6 are associated with recessive deafness DFNB37; Am. J. Hum. Genet., 72(5): 1315-1322. 11.092 36 80. Naz, S., Alasti, F., Mowjoodi, A., Riazuddin, S., Sanati, M.H., Friedman, T.B., Griffith, A.J., Wilcox, E.R., and Riazuddin, S. (2003). Distinctive audiometric profile associated with DFNB21 alleles of TECTA. J. Med. Genet., 4: 360-363. 5.535 11 81. Khan, S.N., Hasan, F., Sallaino, C., Perseu, L., and Riazuddin, S. (2003). characterization of -Thalassemia in Pakistan. Hemoglobin, 27(3): 161-166. Molecular 0.843 0 82. Ahmed, Z.M., Riazuddin, S., Ahmad, J., Bernstein, S.L., Guo, Y., Sabar, M.F., Sieving, F., Riazuddin, S., Griffith, A.J., Friedman, T.B., Belyantseva, I.A., Wilcox, E.R. (2003). PCDH15 is expressed in the neurosensory epithelium of the eye and ear and mutant alleles are responsible for both USH1F and DFNB23. Hum. Mol. Genet., 12(24): 3215-3223. 7.806 55 83. Naz S., Griffith A.J., Riazuddin, S., Hampton L.L., Battey J.F., Khan, S.N., Riazuddin, S., Wilcox E.R. and Friedman T.B. (2004). Mutations of ESPN Vestibular Dysfunction and Autosomal Recessive Deafness. J. Med. Gent., 41: 591-595. 5.535 17 84. Ahmed, Z.M., Li, X.C., Powell, S.D., Riazuddin, S., Young, T.L., Ramzan, K, Ahmad, Z., Luscombe, S., Khillon, K., MacLaren, L., Ploplis, B., Shotland, L.I., Ives, E., Riazuddin, S., Friedman, T.B., Morell, R.J. and Wilcox, E.R. (2004). Characterization of a new full length TMPRSS3 isoform and identification of mutant alleles responsible for nonsyndromic recessive deafness in Newfoundland and Pakistan. BMC Med. Genet., 5: 24. 2.65 85. Rashid, B., Husnain,T., and Riazuddin, S. (2004). In-vitro shoot tip culture of cotton (Gossypium Hirsutum) Pak. J. Bot., 36(4): 817-823. 0.290 86. Zhang, Q., Zulfiqar, F., Riazuddin, S.A., Xiao, Xueshan, Ahmad, Z., Riazuddin, S., Hejtmancik, J.F. (2004). Autosomal recessive retinitis pigmentosa in a Pakistani family mapped to CNG1 with identificatiuon of a novel mutation. Mol. Vision, 10: 884-9. 2.377 2 87. Bashir, K., Husnain, T., Fatima, T., Latif, Z., Riaz, N., Mehdi, S. A. and Riazuddin, S. (2004) Field evaluation and Risk Assessment of transgenic indica basmati Rice. Mol. Breed., 13: 301-312. 2.357 5 309.870 1638 Sub-Total: 36 INTERNATIONAL PUBLICATIONS DURING THE LAST FIVE YEARS (2005-2011) DURING THE YEAR 2005 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2005 S.No. Publications Impact Factor citati on 1. Ramzan, K., Shaikh, R.S., Ahmad, J., Khan, S.N., Riazuddin, S., Zubair, M.A., Friedman, T.B., Wilcox, E.R., Riazuddin, S. (2005). A new locus for nonsyndromic deafness DFNB49 maps to chromosome 5q13.3-q14.1. Hum. Genet., 116: 17-22. 4.523 5 2. Ahmad, J., Khan S.N., Khan, S.Y., Ramzan, K, Riazuddin, S., Ahmed, Z.M., Wilcox, E.R., Friedman, T.B. and Riazuddin, S. (2005). DFNB48, a new nonsyndromic recessive deafness locus maps to chromosome 15q23-q25.1. Hum. Genet., 116: 407-412. 4.523 6 3. Shaikh, R.S., Ramzan, K., Nazli, S., Sattar, S., Khan, S.N., Riazuddin, S., Ahmed, Z.M., Friedman, T.B., Wilcox, E.R., Riazuddin, S. (2005). A new locus for nonsyndromic deafness DFNB51 maps to chromosome 11p13-p12. Am. J. Med. Genet., 138A(4): 392-395. 2.063 4 4. Riazuddin, S.A., Yasmeen, A., Zhang, Q., Yao, W., Sabar, M.F., Riazuddin, S. and Hejtmanic, J.F. (2005). A new locus for autosomal recessive nuclear cataract mapped to chromosome 19q13 in a Pakistani Family. Invest. Opthalmol. Vis. Sci. 46(2): 623-626. 3.431 18 5. Riaz, N., Steinberb, S., Ahmad, J., Pluznikov, A., Riazuddin, S., Cox, N. and Drayna, D. (2005). Genomewide significant linkage to stuttering on chromosome 12. Am. J. Hum. Genet. 76: 647-657. 12.303 14 6. Zhang, Q., Zulfiqar, F., Xiao, X., Riazuddin, S.A., Ayyagari, Radha, Sabar, F., Caruso, R., Sieving, P.A., Riazuddin, S. and Hejtmancik, J.F. (2005). Severe autosomal recessive Retinitis pigmentosa maps to chromosome 1p13.3-p21.2 between D1S2896 and D1S457 but outside ABCA4. Hum. Genet., 118: 356-65. 4.523 6 7. Riazuddin, S.A., Zulfiqar, F., Zhang, Q., Yuri, V. Sergeev, Zaheeruddin, A,Q., Husnain, T., Caruso, R., Riazuddin, S., Sieving, P., and Hejtmancik, J.F. (2005). Autosomal recessive Retinitis pigmentosa is associated with mutations in RP1 in consanguineous Pakistani families. Invest. Opthalmol. Vis. Sci,. 46 (7): 22642270. 3.431 8 37 8. Riazuddin, S.A., Yasmeen, A., Wenliang, Yao, Yuri, Qingjiong Zhang, Zulfiqar, F., Riaz, A., Riazuddin, S., and Hejtmancik, J.F. (2005). Mutation in B3crystallin associated with autosomal recessive cataract in two Pakistani families. Invest. Opthalmol. Vis. Sci., 46(6): 2100-2106. 3.431 32 9. Zhang, Q., Zulfiqar, F., Xiao, X., Riazuddin, S.A., Xueshan, X., Yasmeen, A., Rogan, P.K., Caruso, R., Sieving, P.A., Riazuddin, S. and Hejtmancik, J.F. (2005). A variant form of Oguchi disease mapped to 13q34 associated with partial deletion of GRK1 gene. Mol. Vis. 11: 977-85 2.54 4 10. Bashir, K., Husnain. T., Fatima, T., Latif, Z., Riaz, N. and Riazuddin, S. (2005) Novel Indica Basmati Line (B-370) expressing two unrelated genes of Bacillus thuringiensis is highly resistant to two lepidopteran insects in the field. Crop Protection, 24(10): 870-879. 1.331 11 11. Rafiq, M., Fatima T., Husnain, T., Bashir, K. and Riazuddin, S. (2005). Effect of different media on callus formation and regeneration of different genotypes of Miaze (Zea mays L.). Plant Tissue Culture, 15(1): 57-65. 1.271 0 43.37 108 TOTAL 38 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2006 S.No. Publications Impact Factor citati on 1. Riazuddin, S., Khan, S.N., Ahmed, Z.M., Ghosh, M., Caution, K., Nazli, S., Kabra, M., Zafar, A.U., Chen, K., Naz, S., Antonellis, A., Pavan, W.J., Green, E.D., Wilcox, E.R., Friedman, P.L., Morell, R.J., Riazuddin, S. and Friedman T. B. (2006). Mutations in TRIOBP, which encodes a putative cytoskeletalorganizing protein, are associated with nonsyndromic recessive deafness. Am J. Hum. Genet., 78: 137-43. 12.303 18 2. Rao, A.Q., Hussain, S.S., Shahzad, M.S., Bokhari, S.Y, Raza, M.H, Rakha, A., Majeed, A., Shahid, A.A. Saleem, Z., Husnain, T. and Riazuddin, S. (2006) Somatic embryogenesis in wild relatives of cotton (Gossypium Spp.). J. Zhejiang. Univ. Sci. B. 7(4): 291-8 1.041 0 3. Riaz, N., Husnain, T., Fatima, T., Makhdoom, R., Bashir, K., Masson, L., Altosaar, I. and Riazuddin, S. 2006. Development of Indica Basmati rice harboring two insecticidal genes for sustainable resistance against lepidopteran insects. South African Journal of Botany, 72(2): 217-223 1.080 4 4. Riazuddin SA, Zulfiqar F, Zhang Q, Yao W, Li S, Jiao X, Shahzadi A, Amer M, Iqbal M, Hussnain T, Sieving PA, Riazuddin S, and Hejtmancik JF. (2006). Mutations in the gene encoding the alpha-subunit of rod phosphodiesterase in consanguineous Pakistani families. Mol Vis. 12:1283-91. 2.54 2 5. Rafiq, M., Fatima, T., Husnain, T., Bashir, K., Khan, M.A. and Riazuddin, S. (2006). Regeneration and transformation of an elite inbred line of maize (Zea mays L.), with a gene from Bacillus thuringiensis. South African Journal of Botany, 72(3): 460-466. 1.080 0 6. Ahmed ZM, Goodyear R, Riazuddin S, Lagziel A, Legan PK, Behra M, Burgess SM, Lilley KS, Wilcox ER, Riazuddin S, Griffith AJ, Frolenkov GI, Belyantseva IA, Richardson GP, and Friedman TB. (2006). The tip-link antigen, a protein associated with the transduction complex of sensory hair cells, is protocadherin15. J Neurosci. 26(26):7022-34. 8.238 53 7. Shabbir, M.I., Ahmed, Z.M., Khan, S.Y., Riazuddin, S., Waryah, A.M., Khan, S.N., Camps, R.D., Ghosh, M., Kabra, M., Belyantseva, I.A., Friedman, T.B. and Riazuddin, S. (2006). Mutations of human TMHS cause recessively inherited nonsyndromic hearing loss. J. Med. Genet., 43(8): 634-40. 5.751 14 8. Riazuddin, S., Ahmed, Z.M., Fanning, A.S., Lagziel, A., Kitajiri, S., Ramzan, K., Khan, S.N., Chattaraj, P., Friedman, P.L., Anderson, J.M., Belyantseva, I.A., Forge, A., Riazuddin, S., and Friedman, T.B. (2006) Tricellulin Is a TightJunction Protein Necessary for Hearing. Am. J. Hum. Genet., 79:1040-1051. 12.303 34 44.336 125 TOTAL 39 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2007 S.No. Publications Impact Factor citati on 1. Khan, S.Y., Riazuddin, S., Tariq, M., Anwar, S., Shabbir, M.I., Riazuddin, S.A., Khan, S.N., Husnain, T., Ahmed, Z.M., Friedman, T.B. and Riazuddin, S. (2007). Autosomal recessive nonsyndromic deafness locus DFNB63 at chromosome 11q13.2–q13.3. Hum. Genet. 120(6): 789-793. 4.523 8 2. Khan, S.Y., Ahmed, Z.M., Shabbir, M.I., Kitajiri, S., Kalsoom, S., Tasneem, S., Riazuddin, S., Khan, S.N., Friedman, T.B., Tariq, M., Riazuddin, A., Husnain, T., Riazuddin, S. (2007). Mutations in RDX encoding radixin cause nonsyndromic hearing loss in humans. Hum. Mutat. 28(5): 417-423. 6.887 22 3. Nal, N. Ahmed, Z.M., Erkal, E., Alper, O.M., Lu¨leci, G., Dinc, O., Waryah, A.M., Ain, Q., Tasneem, S., Husnain, T., Chattaraj, P., Riazuddin, S., Boger, E., Ghosh, M., Kabra, M., Riazuddin, S., Morell, R.J. and Friedman, T.B. (2007). Mutational spectrum of MYO15A: The large N-terminal extension of Myosin XVA is required for hearing. Hum. Mutat., 28(10): 1014-19. 6.887 11 4. Maqbool, A., Zahur, M., Irfan, M., Qaiser, U., Rashid, B., Husnain, T. and Riazuddin, S. (2007). Identification, characterization and expression of drought related alpha-crystalline heat shock protein gene (GHSP26) from desi cotton. Crop Sci., 47(6): 2437-2444. 1.735 2 5. Zhang, Q., Zulfiqar, F., Xiao, X., Riazuddin, S.A., Ahmad, Z., Caruso, R., MacDonald, I., Sieving, P., Riazuddin, S. and Hejtmancik, J.F. (2007) Severe retinitis pigmentosa mapped to 4p15 and associated with a novel mutation in the PROM1 gene. Hum. Genet., 122(3-4): 293-9. 4.523 15 6. Sharif, S., Nakagawa ,T., Ohno, T., Matsumoto, M., Kita, T., Riazuddin, S. and Ito, J.. (2007) The potential use of bone marrow stromal cells for cochlear cell therapy. Neuroreport, 18(4):351-4. 1.805 4 7. Ain, Q., Nazli, S., Riazuddin, S., Jaleel, A.U., Riazuddin, S.A., Zafar, A.U., Khan, S.HN., Husnain T., Griffith, A.J., Ahmad. Z.M., Friedman. T.B. and Riazuddin, S. (2007). The autosomal recessive nonsyndromic deafness locus DFNB72 is located on chromosome 19p13.3. Hum. Genet., 122(5): 445-450. 4.523 2 8. Rahman, M., Rashid, H., Shahid, A. A., Bashir, K., Husnain, T. and Riazuddin, S. (2007). Insect resistance and risk assessment studies of advanced generations of Basmati rice expressing two genes of Bacillus thuringiensis (2007). Electro. J. Biotech. 10(2): 240-251. 2.881 0 9. Nasir, I.A. and Riazuddin, S. (2007). New approaches to generate diseaseresistant Gladiolus. World J. Micro. Biotech., 24(3): 367-373 1.082 0 10. Kitajiri, S.I., McNamara, R., Makishima, T., Husnain, T., Zafar, A.U., Kittles, R.A., Ahmed, Z.M., Friedman, T.B., Riazuddin, S. and Griffith A.J. (2007). Identities, frequencies and origins of TMC1 mutations causing DFNB7/B11 deafness in 3.304 10 40 Pakistan. Clin. Genet. 72: 546-550. 11. Butt, T., Yao. W., Kaul. H., Xiaodong. J., Gradstein. L., Zhang. Y., Husnain, T., Riazuddin, S., Hejtmancik . F. J and Riazuddin. S.A. (2007) Localization of autosomal recessive congenital cataracts in consanguineous Pakistani families to a new locus on chromosome 1p. Mol. Vis., 13:1635-1640. 2.54 6 12. Verma, I.C., Kleanthous, M., Saxena, R., Fucharoen, S., Winichagoon, P., Riazuddin, S., Khan, S.N., Akbari, M.T., Izadyar, M., Kotea, N., Old, J.M., Ioannou, P.A., and Khan, B. (2007). Multicenter Study of the Molecular Basis of Thalassemia Intermedia in Different Ethnic Populations. Hemoglobin, 31(4): 439-452. 1.129 6 41.819 86 TOTAL 41 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2008 S.No. Publications Impact Factor citati on 1. Pasha, Z., Wang, Y., Riazuddin, S., Zhang, D., Zhao, T. and Ashraf, M. (2008). Preconditioning enhances cell survival and differentiation of stem cells during transplantation in infarcted myocardium. Cardiovascular Res., 77(1): 134-142. 5.801 42 2. Riazuddin, S., Nazli, S., Ahmed, Z.M., Yang, Y., Zulfiqar, F., Shaikh, R.S., Zafar, A.U., Khan, S.N., Sabar, M.F., Javid, F.T., Wilcox, E.R., Ekaterini, T., Boger, E.T., Sellers, J.R., Belyantseva, I.A., Riazuddin, S. and Friedman T. (2008). Mutation Spectrum of MYO7A and Evaluation of a Novel Nonsyndromic Deafness DFNB2 Allele with Residual Function. Hum. Mutat., 29(4): 502-511. 6.887 12 3. Collin, R.W.J., Kalay, E., Tariq, M., Peters, T., Zwaag, B van der., Venselaar, H., Oostrik, J., Lee, K.M., Ahmed, Z.M., Caylan, R., Li, Y., Spierenburg, H.A., Eyupoglu, E., Heister, A., Riazuddin, S., Bahat, E., Ansar, M., Arslan, S., Wollnik, B., Brunner, H., Cremers, Cor W.R.J., Karaguzel, A., Ahmad, W., Cremers, F.P.M. Vriend, G., Friedman, T.B., Riazuddin, S., Leal, S.M. and Kremer, H. (2008). Mutations of ESRRB encoding estrogen-related receptor beta cause autosomal recessive nonsyndromic hearing impairment DFNB35. Am. J. Hum. Genet. 83(1): 25-138 12.303 12 4. Ahmed, Z.M., Riazuddin, S., Aye, S., Ali, R.A., Venselaar, H., Anwar, S., Belyantseva, P.P., Qasim,M., Riazuddin, S. and Friedman, T.B. (2008). Gene structure and mutant alleles of PCDH15: nonsyndromic deafness DFNB23 and type 1 Usher syndrome. Hum. Genet. 124(3):215-23. 4.523 6 5. Mahmood-Ur-Rahman, Ali, I., Husnain, T. and Riazuddin, S. (2008) RNA interference: The story of gene silencing in plants and humans. Biotechnol. Adv., 26(3): 202-9. 8.250 0 6. Ahmed, Z.M., Masmoudi, S., Kalay, E., Belyantseva, I.A., Mosrati, M.A., Collin, R.W., Riazuddin, S., Hmani-Aifa, M., Venselaar, H., Kawar, M.N., Tlili, A., van der Zwaag, B., Khan, S.Y., Ayadi, L., Riazuddin, S.A., Morell, R.J., Griffith, A.J., Charfedine, I., Caylan, R., Oostrik, J., Karaguzel, A., Ghorbel, A., Riazuddin, S., Friedman, T.B., Ayadi, H. and Kremer, H. (2008). Mutations of LRTOMT, a fusion gene with alternative reading frames, cause nonsyndromic deafness in humans. Nat. Genet., 40(11):1335-40. 34.284 7 7. Idrees, M., Riazuddin, S. (2008) Frequency distribution of hepatitis C virus genotypes in different geographical regions of Pakistan and their possible routes of transmission. BMC. Infect. Dis. 23;8:69. 2.55 12 8. Firasat, S., Riazuddin, S.A., Khan, S.N., Riazuddin S. (2008) Novel CYP1B1 mutations in consanguineous Pakistani families with primary congenital glaucoma. Mol. Vis. 14:2002-09 2.54 0 42 9. Firasat, S., Riazuddin, S.A., Hejtmancik, J.F., and Riazuddin, S. (2008) Primary congenital glaucoma localizes to chromosome 14q24.2-24.3 in two consanguineous Pakistani families. Mol. Vis. 14:1659-65. 2.54 3 10. Tariq, M.A., Sabir, M.F., Riazuddin, S.A., and Riazuddin, S. (2008) Haplotype analysis of two X-chromosome STR clusters in the Pakistani population. Int. J. Legal Med. 123(1):85-7. 2.793 1 11. Khan Barozai MY, Irfan, M., Yousaf, R., Ali, I., Qaisar, U., Maqbool, A., Zahoor, M., Rashid, B., Hussnain, T., and Riazuddin S. (2008) Identification of microRNAs in cotton. Plant Physiol. Biochem., 46(8-9):739-51. 2.485 5 12. Tariq MA, Ullah O, Riazuddin SA, Riazuddin S. (2008) Allele frequency distribution of 13 X-chromosomal STR loci in Pakistani population. Int. J. Legal Med., 122(6):525-8. 2.793 4 13. Nasir IA, Riazuddin S. (2008) In vitro selection for Fusarium wilt resistance in Gladiolus. J. Integr. Plant Biol., 50(5):601-12. 1.395 2 14. Rashid B, Saleem Z, Husnain T, Riazuddin S. (2008). Transformation and Inheritance of Bt Genes in Gossypium hirsutum. J. Plant Bio. 51(4): 248-254. 0.785 0 15. Maqbool A, Zahur M, Husnain T and Riazuddin S (2008). GUSP1 and GUSP2, two droughts – responsive genes in Gossypium arboretum have homology to universal stress Proteins. Plant Mol. Biol Rep 3.847 1 16. Zahur M, Maqbool A, Irfan M, Barozai MYK, Rashid B, Husnain T. and Riazuddin, S. (2008). Isolation and Functional Analysis of Cotton Universal Stress Protein Promoter in Response to Phytohormones and Abiotic Stresses. Mol. Biol. 43(4):628-635. 0.805 0 17. Maqbool, A., Zahur, M., Irfan, M., Barozai, M.Y.K., Rashid, B., Husnain, T and Riazuddin, S. (2008). Identification and Expression of six drought responsive transcripts through Differential Display in desi cotton (Gossypium arboreum). Mol. Biol. 42(4):492-498. 0.805 1 18. Irfan, M., Barozai, M.Y.K., Maqbool, A., Qaiser, U., Zahur, M., Rashid, B., Hernandez, A.G., Bohnert, H.J., Husnain, T and Riazuddin, S. (2008). Drought stressed cDNA library from leaves of Gossypium arboreum. GenBank accession number FL576377- FL577777 (1401 EST’s). N.A 0 19. Shahid A.A, Husnain T and Riazuddin S (2008). Ascochyta blight of chickpea: Production of phytotoxins and disease management. Biotech Adv. 211-515 8.250 0 103.636 108 TOTAL 43 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2009 S.No. Publications Impact Factor citati on 1. Anwar S, Riazuddin S, Ahmed ZM, Tasneem S, Jaleel AU, Han SY, Griffith AJ, Friedman TB and Riazuddin S. (2009) SLC26A4 mutation spectrum associated with DFNB4 deafness and Pendred syndrome in Pakistan. J. Hum. Genet., 54(5):266-70. 2.547 2 2. Hmani-Aifa M, Benzina Z, Zulfiqar F, Dhouib H, Shahzadi A, Ghorbel A, Rebaï A, Söderkvist P, Riazuddin S, Kimberling WJ, and Ayadi H. (2009) Identification of two new mutations in the GPR98 and the PDE6B genes segregating in a Tunisian family. Eur. J. Hum. Genet., 17(4):474-82. 3.564 3 3. Ahmed, Z.M., Riazuddin, S., Khan, S., Friedman, P., Riazuddin, S. and Friedman, T. (2009). USH1H, a novel locus for type I Usher syndrome, maps to chromosome 15q22-23. Clin. Genet., 75(1):86-91. 3.304 6 4. Zahur, M., Maqbool, A., Irfan, M., Barozai, M.Y., Qaiser, U., Rashid, B., Husnain, T., and Riazuddin, S. (2009) Functional analysis of cotton small heat shock protein promoter region in response to abiotic stresses in tobacco using Agrobacterium-mediated transient assay. Mol. Biol. Rep., 36(7):1915-21. 2.038 0 5. Choi, B.Y., Ahmed, Z.M., Riazuddin, S., Bhinder, M.A., Shahzad, M., Husnain, T., Riazuddin S., Griffith, A.J. and Friedman, T.B. (2009). Identities and frequencies of mutations of the otoferlin gene (OTOF) causing DFNB9 deafness in Pakistan. Clin. Genet., 75(3):237-43 3.304 5 6. Waryah, A.M., Rehman, A.U., Ahmed, Z.M., Bashir, Z.H., Khan, S.Y., Zafar, A.U., Friedman, T.B., Riazuddin, S., and Riazuddin S. (2009) DFNB74, a new autosomal recessive nonsyndromic hearing impairment locus at chromosome 12q14.2-q15. Clin. Genet., 76(3):270-5. 3.304 0 7. Ali, M., Mckibbin, M., Booth, A., Parry, D.A., Jain, P., Riazuddin, S.A., Hejtmancik, J.F., Khan, S.N., Firasat, S., Shires, M., Gilmour, D.F., Towns, K., Murphy, A., Azmanov, D., Tournev, I., Cherninkova, S., Jafri, H., Raashid, Y., Toomes, C., Craig, J., Mackey, D.A., Kalaydjieva, L., Riazuddin, S., and Inglehearn, C.F. (2009) Null mutations in ltbp2 cause primary congenital glaucoma. Am. J. Hum. Genet., 84(5):664-71. 12.303 12 8. Zahur, M., Maqbool, A., Irfan, M., Barozai, M.Y.K., Qaiser, U., Rashid, B., Husnain, T., and Riazuddin, S. (2009). Functional analysis of cotton small heat shock protein promoter region in response to abiotic stresses in tobacco Using Agrobacterium-Mediated transient assay. Mol. Biol. Rep., 36(7):1915-21. 2.038 0 9. Riazuddin, S.A., Kaul, H., Butt, T., and Riazuddin, S. (2009) Novel SIL1 mutations in consanguineous Pakistani families mapping to chromosome 5q31. Mol. Vis.15:1050-6. 2.54 0 44 10. Idrees, M., Riazuddin, S. (2009). A study of best positive predictors for sustained virologic response to interferon alpha plus ribavirin therapy in naive chronic hepatitis C patients. BMC Gastroenterol., 9:5. 1.89 2 11. Schultz, J.M., Khan, S.N., Ahmed, Z.M., Riazuddin, S., Waryah, A.M. Chhatre, D., Starost, M.F., Ploplis, B., Buckley, S., Velasquez, D., Kabra, M., Lee, K., Hassan, M.J., Ali, G., Ansar, M., Ghosh, M., Wilcox, E.R., Ahmad, W., Merlino, G., Leal, S.M., Riazuddin, S., Friedman, T.B., and Morell, R.J. (2009). Mutations affecting regulation of the HGF gene are the cause of nonsyndromic hearing loss DFNB39. Am. J. Hum. Genet., 85(1):25-39. 12.303 3 12. Riazuddin, S., Anwar, S., Fischer, M., Ahmed, Z.M., Khan, S.Y., Janssen, A.G., Zafar, A.U., Scholl, U., Husnain, T., Belyantseva, I.A., Friedman, P.L., Riazuddin S., Friedman, T.B., and Fahlke, C. (2009). Molecular basis of DFNB73: mutations of BSND can cause nonsyndromic deafness or Bartter syndrome. Am. J. Hum. Genet., 85(2):273-80. 12.303 2 13. Idrees, M., Butt, S., Awan, Z., Aftab, M., Khubaib, B., Rehman, I.U., Akram, M., Manzoor, S., Akbar, H., Rafiqe, S., and Riazuddin S. (2009). Nucleotide identity and variability among different Pakistani hepatitis C virus isolates. Virol J, 6:130. 2.44 0 14. Zaidi, M.A., Ye, G., Yao, H., You, T.H., Loit, E., Dean, D.H., Riazuddin, S., and Altosaar, I. (2009). Transgenic rice plants expressing a modified cry1Ca1 gene are resistant to Spodoptera litura and Chilo suppressalis. Mol. Biotechnol., 43(3):232-42. 2.44 1 15. Idrees, M., Rafique, S., Rehman, I., Akbar, H., Yousaf, M.Z., Butt, S., Awan, Z., Manzoor, S., Akram, M., Aftab, M., Khubaib, B., and Riazuddin, S. (2009). Hepatitis C virus genotype 3a infection and hepatocellular carcinoma: Pakistan experience. World J. Gastroenterol., 15(40):5080-5. 2.092 2 16. Hussain, S.S., Rao, A.Q., Husnain, T., and Riazuddin, S. (2009). Cotton somatic embryo morphology affects its conversion to plant. Biolog. Plant, 53 (2): 307-311 17. Rao, A.Q., Bakhsh, A., Kiani, S, Shahzad, K., Shahid, A.A., Husnain T. and Riazuddin S. (2009) The Myth of Plant Transformation. Biotechnol. Adv, 27(6):753-63. TOTAL 1.656 3 8.250 3 78.316 44 45 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2010 S.No. Publications Impact Factor citati on 1. Maqbool, A., Abbas, W., Rao, A.Q., Irfan, M., Zahur, M., Bakhsh, A., Riazuddin, S., and Husnain, T. (2010). Gossypium arboreum GHSP26 enhances drought tolerance in Gossypium hirsutum. Biotechnol. Prog. 26(1):21-5. 2.398 0 2. Khan, S.Y., Riazuddin, S., Shahzad, M., Ahmed, N., Zafar, A.U., Rehman, A.U., Morell, R.J., Griffith, A.J., Ahmed, Z.M., Riazuddin, S., and Friedman, T.B. (2010) DFNB79: reincarnation of a nonsyndromic deafness locus on chromosome 9q34.3. Eur. J. Hum. Genet., 18(1):125-129. 3.564 1 3. Khaliq, S., Khaliq, S.A., Zahur, M., Ijaz, B., Jahan, S., Ansar, M., Riazuddin, S., and Hassan, S. (2010). RNAi as a new therapeutic strategy against HCV. Biotechnol. Adv. 28(1):27-34. 8.250 2 4. Naz S, Riazuddin SA, Li L, Shahid M, Kousar S, Sieving PA, Hejtmancik JF, and Riazuddin S. (2010). A novel locus for autosomal recessive retinitis pigmentosa in a consanguineous Pakistani family maps to chromosome 2p. Am J Ophthalmol. 149(5):861-6. 3.833 1 5. Shehzadi, A., Riazuddin, S.A., Ali, S., Li, D., Sabar, M.F., Khan, S.N., Sieving, P.A., Hejtmancik, J.F. and Riazuddin, S. (2010). Nonsense mutation of MERTK causes autosomal recessive retinitis pigmentosa in a consanguineous Pakistani family. Br J Ophthalmol. 94(8):1094-9. 2.917 0 6. Kang, C., Riazuddin, S., Mundorff, J., Krasnewich, D., Friedman, P.L., Mullikan, J.C., and Drayna, D. (2010) Association of persistent stuttering with mutations in the lysosomal enzyme targeting pathway. N Engl J Med. 362(8):677-85. 47.050 9 7. Rehman, A.U., Morell, R.J., Khan, S.Y., Belyantseva, I.A., Boger, E.T., Shahzad, M., Ahmed, Z.M., Riazuddin, S., Khan S.N., Riazuddin, S., and Friedman, T.B. (2010) Targeted Capture and Next-Generation Sequencing of the 2.9 Megabase DFNB79 Locus Identifies Mutations in C9orf75, Encoding TAPERIN, as a Cause of Nonsyndromic Deafness. Am J Hum Genet. 86(3):378-88. 12.303 5 8. Yasmeen A, Riazuddin SA, Kaul H, Mohsin S, Khan M, Qazi ZA, Nasir IA, Zafar AU, Khan SN, Husnain T, Akram J, Hejtmancik JF, and Riazuddin S. (2010). Autosomal recessive congenital cataract in consanguineous Pakistani families is associated with mutations in GALK1. Mol Vis.16:682-8. 2.54 0 9. Hertzano, R., Puligilla, C., Chan, S.L., Timothy, C., Depireux, D., Wolf, J., Ahmed, Z.M., Friedman, T.B., Riazuddin, S., Kelley, M.W. and Strome, S.E. (2010). CD44 is a marker for the outer pillar cell in the early post-natal mouse inner ear. J Assoc Res Otolaryngol. 11(3):407-18. 2.436 0 10. Kitajiri, S., Sakamoto, T., Belyantseva, I.A., Goodyear, R.J., Stepanyan, R., Fujiwara, I., Bird, J.E., Riazuddin, S., Riazuddin, S., Ahmed, Z.M., Hinshaw, J.E., Sellers, J., Bartles, J.R., Hammer, J.A., Richardson, G.P., Griffith, A.J., 31.152 1 46 Frolenkov, G.I., and Friedman, T.B. (2010). Actin-Bundling Protein TRIOBP Forms Resilient Rootlets of Hair Cell Stereocilia Essential for Hearing. Cell. 141(5):786-98. 11. Riazuddin SA, Iqbal M, Wang Y, Masuda T, Chen Y, Bowne S, Sullivan LS, Waseem NH, Bhattacharya S, Daiger SP, Zhang K, Khan SN, Riazuddin S, Hejtmancik JF, Sieving PA, Zack DJ, Katsanis N. (2010) A splice-site mutation in a retina-specific exon of BBS8 causes nonsyndromic retinitis pigmentosa. Am J Hum Genet. 86(5):805-12. 12.303 1 12. Kaul H, Riazuddin SA, Shahid M, Kousar S, Butt NH, Zafar AU, Khan SN, Husnain T, Akram J, Hejtmancik JF, and Riazuddin S. (2010). Autosomal recessive congenital cataract linked to EPHA2 in a consanguineous Pakistani family. Mol Vis. 16:511-7. 2.54 4 13. Kaul H, Riazuddin SA, Yasmeen A, Mohsin S, Khan M, Nasir IA, Khan SN, Husnain T, Akram J, Hejtmancik JF, and Riazuddin S. (2010). A new locus for autosomal recessive congenital cataract identified in a Pakistani family. Mol Vis. 16:240-5. 2.54 4 14. Khan, M., Mohsin, S., Khan, S.N., and Riazuddin, S. (2010) Repair of senescent myocardium by mesenchymal stem cells is dependent on the age of donor mice. J. Cell. Mol. Med. Available online 5.228 0 15. Khan M, Akhtar S, Mohsin S, N Khan S, and Riazuddin S. (2010). Growth Factor Preconditioning Increases the Function of Diabetes-Impaired Mesenchymal Stem Cells. Stem Cells Dev. Available online 4.146 0 16. Raza MH, Riazuddin S, Drayna D. (2010). Identification of an autosomal recessive stuttering locus on chromosome 3q13.2-3q13.33. Hum Genet. 128(4):461-3. 4.523 0 17. Riazuddin SA, Shahzadi A, Zeitz C, Ahmed ZM, Ayyagari R, Chavali VR, Ponferrada VG, Audo I, Michiels C, Lancelot ME, Nasir IA, Zafar AU, Khan SN, Husnain T, Jiao X, MacDonald IM, Riazuddin S, Sieving PA, Katsanis N, and Hejtmancik JF. (2010). A mutation in SLC24A1 implicated in autosomalrecessive congenital stationary night blindness. Am J Hum Genet. 87(4):523-31. 12.303 0 18. Li L, Nakaya N, Chavali VR, Ma Z, Jiao X, Sieving PA, Riazuddin S, Tomarev SI, Ayyagari R, Riazuddin SA, and Hejtmancik JF. (2010). A mutation in ZNF513, a putative regulator of photoreceptor development, causes autosomalrecessive retinitis pigmentosa. Am J Hum Genet. 87(3):400-9. 12.303 0 19. Kaul H, Riazuddin SA, Qazi ZA, Nasir IA, Zafar AU, Khan SN, Husnain T, Akram J, Hejtmancik JF, and Riazuddin S. (2010). Ectopia lentis in a consanguineous pakistani family and a novel locus on chromosome 8q. Arch Ophthalmol.; 128(8):1046-9. 3.86 0 20. Khan, M., Mohsin, S., Khan, S.N. and Riazuddin S, (2010). Lin-c-kit+BM-derived stem cells repair Infarcted Heart. Journal of Stem Cells Regenerative Medicine 16: 15-25. 176.189 28 TOTAL 47 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2011 S.No. Publications Impact Factor citati on 1. Mohsin S, Shams S, Ali Nasir G, Khan M, Javaid Awan S, Khan SN, and Riazuddin S. (2011) Enhanced hepatic differentiation of mesenchymal stem cells after pretreatment with injured liver tissue. Differentiation. 81(1):42-8. 3.311 0 2. Ahmed ZM, Yousaf R, Lee BC, Khan SN, Lee S, Lee K, Husnain T, Rehman AU, Bonneux, S, Ansar M, Ahmad W, Leal SM, Gladyshev VN, Belyantseva IA, Van Camp G, Riazuddin S, and Friedman TB, Riazuddin S. (2011) Functional null mutations of MSRB3 encoding methionine sulfoxide reductase are associated with human deafness DFNB74. Am J Hum Genet. 88: 19-29. 12.303 0 3. Borck G, Rehman AU, Lee K, Pogoda HM, Kakar N, von Ameln S, Grillet N, Hildebrand MS, Ahmed ZM, Nürnberg G, Ansar M, Basit S, Javed Q, Morell RJ, Nasreen N, Shearer AE, Ahmad A, Kahrizi K, Shaikh RS, Ali RA, Khan SN, Goebel I, Meyer NC, Kimberling WJ, Webster JA, Stephan DA, Schiller M, Bahlo M, Najmabadi H, Gillespie PG, Nürnberg P, Wollnik B, Riazuddin S, Smith RJH, Ahmad W, Müller U, Hammerschmidt M, Friedman TB, Riazuddin S, Leal SM, Ahmad J, Kubisch C. (2011) Loss-of-function mutations of ILDR1 cause autosomal recessive hearing impairment DFNB42. Am J Hum Genet. 88: 127137. Riazuddin S, Ahmed ZM, Hegde RS, Khan SN, Nasir I, Shaukat U, Riazuddin S, Butman JA, Griffith AJ, Friedman TB, and Choi BY. (2011) Variable expressivity of FGF3 mutations associated with deafness and LAMM syndrome. BMC Med Genet . 12(1):21. 12.303 1 2.84 0 5. Rehman AU, Gul K, Morell RJ, Lee K, Ahmed ZM, Riazuddin S, Ali RA, Shahzad M, Jaleel AU, Andrade PB, Khan SN, Khan S, Brewer CC, Ahmad W, Leal SM, Riazuddin S, Friedman TB. Mutations of GIPC3 cause nonsyndromic hearing loss DFNB72 but not DFNB81 that also maps to chromosome 19p. Hum Genet (2011). Available online. 5.047 0 6. Waryah AM, Ahmed ZM, Bhinder MA, Choo DI, Sisk RA, Shahzad M, Khan SN, Friedman TB, Riazuddin S, Riazuddin S. Molecular and Clinical studies of Xlinked deafness among Pakistani families. J Hum Genet (2011). 56(7): 534-540. 2.496 0 7. Ali RA, Rehman AU, Khan SN, Husnain T, Riazuddin S, Friedman TB, Ahmed ZM, Riazuddin S. DFNB86, A novel autosomal recessive nonsyndromic deafness locus on chromosome 16p13.3. Clin Genet (2011). In press. 2.942 8. Schultz JM, Bhatti R, Madeo AC, Turriff A, Muskett JA, Zalewski CK, King KA, Ahmed ZM, Riazuddin S, Ahmad N, Hussain Z, Qasim M, Khan SN, Meltzer MR, Liu XZ, Munisamy M, Ghosh M, Rehm HL, Tsilou EK, Griffith AJ, Zein WM, Brewer CC, Riazuddin S, Friedman TB. Allelic hierarchy of CDH23 mutations causing nonsyndromic deafness DFNB12 or Usher syndrome USH1D in compound heterozygotes. J Med Genet (2011). In press. 7.037 9. Iqbal M, Naeem MA, Riazuddin SA, Ali S, Farooq T, Qazi ZA, Khan SN, Husnain T, Riazuddin S, Sieving PA, Hejtmancik JF, Riazuddin S. Association of Pathogenic Mutations in TULP1 With Retinitis Pigmentosa in Consanguineous Pakistani Families. Arch Ophthalmol (2011). 129:1351-1357. 3.52 4. 48 0 10. Ashfaq UA, Masoud MS, Nawaz Z, Riazuddin S. Glycyrrhizin as antiviral agent against Hepatitis C Virus. J Transl Med (2011). 9:112. 3.51 0 11. Ali S, Riazuddin SA, Shahzadi A, Nasir IA, Khan SN, Husnain T, Akram J, Sieving PA, Hejtmancik JF, Riazuddin S. Mutations in the β-subunit of rod phosphodiesterase identified in consanguineous Pakistani families with autosomal recessive retinitis pigmentosa. Mol Vision (2011). 17:1373-1380. 2.54 0 12. Chen J, Smaoui N, Hammer MB, Jiao X, Riazuddin SA, Harper S, Katsanis N, Riazuddin S, Chaabouni H, Berson EL, Hejtmancik JF. Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes. IOVS (2011). 52:5317-5324. 3.466 0 13. Chen J, Ma Z, Jiao X, Fariss R, Kantorow WL, Kantorow M, Pras E, Frydman M, Pras E, Riazuddin S, Riazuddin SA, Hejtmancik JF. Mutations in FYCO1 cause autosomal-recessive congenital cataracts. Am J Hum Genet (2011). 88:627638. 11.680 2 14. Ashfaq UA, Masoud MS, Khaliq S, Nawaz Z, Riazuddin S. Inhibition of hepatitis C virus 3a genotype entry through Glanthus Nivalis Agglutinin. Virol J (2011). 8:248. Rehman S, Ashfaq UA, Riaz S, Javed T, Riazuddin S. Antiviral activity of Acacia nilotica against Hepatitis C Virus in liver infected cells. Virol J (2011). 8:220. 2.55 0 2.55 0 16. Ansar M, Ashfaq UA, Shahid I, Sarwar MT, Javed T, Rehman S, Hassan S, Riazuddin S. Inhibition of full length hepatitis C virus particles of 1a genotype through small interference RNA. Virol J (2011). 8:203. 2.55 0 17. Ashfaq UA, Javed T, Rehman S, Nawaz Z, Riazuddin S. Lysosomotropic agents as HCV entry inhibitors. Virol J (2011). 8:163. Ashfaq UA, Javed T, Rehman S, Nawaz Z, Riazuddin S. An overview of HCV molecular biology, replication and immune responses. Virol J (2011). 8:161. 2.55 0 2.55 0 Ashfaq UA, Khan SN, Nawaz Z, Riazuddin S. In-vitro model systems to study Hepatitis C Virus. Genet Vaccines (2011). 9:7. Rao AQ, Irfan M, Saleem Z, Nasir IA, Riazuddin S, Husnain T. Overexpression of the phytochrome B gene from Arabidopsis thaliana increases plant growth and yield of cotton (Gossypium hirsutum). J Zhejiang Univ Sci B (2011). 12:326334. Ashfaq UA, Javed T, Rehman S, Nawaz Z, Riazuddin S. Inhibition of HCV 3a core gene through Silymarin and its fractions. Virol J (2011). 8:153. 2.10 0 0.322 0 2.55 1 15. 18. 19. 20. 21. 22. Naz S, Ali S, Riazuddin SA, Farooq T, Butt NH, Zafar AU, Khan SN, Husnain T, Macdonald IM, Sieving PA, Hejtmancik JF, Riazuddin S. Mutations in RLBP1 associated with fundus albipunctatus in consanguineous Pakistani families. Br J Ophthalmol (2011). 95:1019-1024. 2.934 0 23. Ali Ashfaq U, Ansar M, Sarwar MT, Javed T, Rehman S, Riazuddin S. Post2.55 transcriptional inhibition of hepatitis C virus replication through small interference RNA. Virol J (2011). 8:112. Javed T, Ashfaq UA, Riaz S, Rehman S, Riazuddin S. In-vitro antiviral activity of 2.55 Solanum nigrum against Hepatitis C Virus. Virol J (2011). 8:26. TOTAL (2011) 98.751 0 24. 49 0 4 LIST OF INTERNATIONAL PUBLICATIONS BY PROF. S. RIAZUDDIN FOR THE YEAR TO 2012 S.No. Publications 1. Choudhery, M.S., Khan. M., Mahmood, R., Mehmood, A., Khan, S.N. and Riazuddin, S. (2012) Bone marrow derived mesenchymal stem cells from aged mice have reduced wound healing, angiogenesis, proliferation and antiapoptosis Capabilities. Cell Biol. Inter. Manuscript No. CBI20110183 1.8 2. Choudhery, M.S., Khan, M., Mahmood, R., Mohsin, S., Akhtar, S., Ali, F., Khan, S.N., and Riazuddin, S. (2012) Mesenchymal stem cells conditioned with glucose depletion augments their ability to repair-infarcted myocardium. J. Cell. Mol. Med. Vol XX, No X, pp.1-12. 4.6 3. Ali, G., Mohsin, S., Nasir, G.A., Shams, S., Khan, N.S., and Riazuddin, S. (2012) Nitric oxide augments mesenchymal stem cell ability to repair liver fibrosis. Submitted to Translational Medicine TOTAL (2012) 3.5 GRAND TOTAL Impact Factor citati on 9.9 906.187 50 499 LIST OF CHAPTERS IN THE BOOKS WRITTEN/ EDITED BY PROF. S. RIAZUDDIN TITLE OF THE BOOK/ CHAPTER/ PUBLISHER 1. Riazuddin, S. (1980). Purification and properties of pyrimidine dimer specific endonucleases from Micrococcus luteus. Methods Enzymol., 65: 185-191. 2. Riazuddin, S. (1980). Purification and properties of an endonuclease specific for non-pyrimidine dimer damage induced by ultraviolet radiations. Methods Enzymol. 65: 231-235. 3. Riazuddin, S. (1980). Purification and properties of a 3-methyladenine DNA glycosylase from Escherchia coli. Methods Enzymol., 65: 290-295. 4. Khan, A.M., Riazuddin, S., Qadir, A., Qazi, M.N. Physics and Contemporary Needs. Vol. 6. Plenum Press, New York (1984). 5. Riazuddin, S. Base modifications and their repair. In: "Repairable lesions in microorganisms," Eds: J. E. Hurst, J. Dillon and A. Nasim, pp. 149-186, Plenum Press, New York (1984). 6. Riazuddin, S. Establishment of International Centre for Genetic Engineering and Biotechnology. UNIDO-IS.254. 7. Riazuddin, S. IARC Monograph on the Evaluation of Carcinogenic Risks of Chemicals to Humans. Vol. 31. (1982). 8. Riazuddin, S. Centre for the production of enzymes. UNIDO-IS.271. 9. Riazuddin, S. Capability building in biotechnology and genetic engineering in developing countries. UNIDO-IS.608. 10. Grossman, L., Riazuddin, S. Doniger, J. and Hamilton, L. (1977). DNA synthesis: Present and future "NATO Advanced study Institutes Series." Eds.: Molineuse, I. and Kohiyama, M., Plenum Press. NY and London, 17, 915-965. 11. Lindahl, T., Karan, P., and Riazuddin, S. (1979). DNA G-glycosylases of E. coli. In: DNA repair mechanisms. Eds: Hanawalt, P. and Friedberg, F.C., Academic Press, NY. 12. Riazuddin, S. and Nasim, A. Future growth in biotechnology in the developing countries at the XVI International Congress of Genetics at Toronto, Ontario, Canada, August 20-27, 1989. Genome, Vol. 31(2): 1042-1045. 13. Grossman, L. and Riazuddin. S. (1979). Correndonucleases. Friedberg, F.C., Academic Press, NY. 14. Riazuddin, S. and Husnain, T. (1992). Transformation of chickpea (Cicer arietinum L.) In: Biotechnology in Agriculture and Forestry, Ed. Y.P.S. Bajaj, Springer-Verlag, N.Y. USA. 15. Riazuddin, S. (1994). Plant Genetic Engineering and Future Agriculture. Methods, vol.16, p.93-113, Plenum Press, New York. 16. Riazuddin, S. (2000). National Policy and Regulation. In: Biotechnology in the developing world and countries in economic transition edited by G.T. Tzotzos and K.G. Skryabin, CABI Publishing, pages 142-146 17. Ahmed, Z.M., Riazuddin, S., Friedman, T.B., Riazuddin, S., Wilcox, E.R. and Griffith, A.J. (2002). Clinical Manifestations of DFNB29 Deafness. Adv. Otolaryyngol., 61: 156-160. 18. Riazuddin, S., Ahmed, Z.M, Friedman, T.B., Griffith, A.J. Riazuddin, S. and Wilcox, E.R. (2002). Genetic Modifiers of Hereditary Hearing Loss. Adv. Otolaryyngol., 61: 224–229. 18. Rashid, B., Husnain, T., Riazuddin, S. (2010) Plant Adaptation and Phytoremediation, Chapter 19 Herbicides and pesticides as potential pollutants – A global problem. Ashraf, M.; Ozturk, M.; Ahmad, M. S. A. (Eds.), pp 427-447, Springer Netherlands-Dordrecht, Hardcover ISBN: 978-90-481-9369-1.http://dx.doi.org/10.1007/978-90-481-9370-7 In: DNA repair mechanisms. Eds: Hanawalt, P. and In: Genetic Engineering Principles and BOOKS 1. Khan, A.M., Riazuddin, S., Qadir, A., Qazi, M.N. Physics and Contemporary Needs. Vol. 6. Plenum Press, New York (1984). 2. Shakoori, A.R., Hashmi, T.H., Riazuddin, S. and Shaikh, K.H., 1988. (Eds .) An Annotated Textbook of Biology for Higher Secondary School , based on modernized curricula in Biology proposed for Secondary Schools in ISESCO Member State , Islamic Educational, Scientific and Cultural Organization, Rabbat , Morocco , pages, 833 3. Shakoori, A.R., Hashmi, T.H., Riazuddin, S. and Shaikh, K.H., 1988. (Eds .) An Annotated Textbook of Biology for Secondary School , based on modernized curricula in Biology proposed for Secondary Schools in ISESCO Member State , Islamic Educational, Scientific and Cultural Organization, Rabbat , Morocco , pages, 377. Rashid, B., Husnain, T., Riazuddin, S. (2010). Gene Pyramiding: An Approach Towards Sustainable Insect Resistance. by Publishers VDM Verlag Dr. Mϋllar Aktiengesellschaft & Co. Kg Dudweiler Landstr. 99,66123 Saarbrϋcken, Germany. ISBN 978-3-639-25629-1. 4. 51 LIST OF PATENTS Patent #6150156 on “Bacillus thuringiensis isolates active against sucking insects” Patent No.137087 “Process for the Making of Bacillus thuringiensis Biopesticides/ Bioinsecticides” through Patent Officer, Govt. of Pakistan, Karachi. Patent No.137121 on “Process Development for Fungal Biopesticide” through Patent Officer, Govt. of Pakistan, Karachi. Patent No. 138279 on “Methods for determination of Protein and DNA continents for detection of Bacillus thuringiensis in Plant Products” through Patent Officer, Govt. of Pakistan, Karachi. Patent No.138287 on “Development of Basmati Rice containing multiple transgenes” through Patent Officer, Govt. of Pakistan, Karachi. Patent No. 138719 on “Assay system for molecular diagnosis (PCR-based of Hepatitis C. Virus. Patent No. PCT/US10/23437 “Diagnostic and Therapeutic uses of GNPTAB, CNTPG and NAGPA in stuttering” (2010). Patent No. 140587 “A method of purification of the recombinant protein products. (2009)” through Pakistan patent office, Karachi. Patent No. 140586 “A process for modification of recombinant human interferon for therapeutic use. (2009) through Pakistan patent office, Karachi. Patent No. 140574 “An improved expression of codon optimized human interferon” (2007) through Pakistan patent office, Karachi. Patents submitted to USFDA 3-[(2-furyl-1-(3-hydroxyl-10, 13-dimethyl-tetra deca hydroxy-1H-cyclopenta (ß) phenanthren-17-yl]-3-phenyl-2-propen-1-one or derivatives thereof for treating or preventing antiviral infections 7-Nitro-2-(3-nitro phenyl)-4H-3,1-benzoxazin-4-one or derivatives thereof for treating or preventing antiviral infections 3-amino-2-(4-nitrophenyl)-4-(3H)-quinazolinone or derivatives thereof for treating or preventing antiviral infections 52 SUGGESTED REFEREES Richard J. Roberts (Nobel Laureate), New England Biolabs., Inc., 240 County Road, Ipswich, MA 01932-2723, USA. [T.N.978-380-7405; Fax: 978-380-7406; Email: roberts@neb.com] Thomas B. Friedman, Chief, Laboratory of Molecular Genetics, National Institute on Deafness and Other Communication Disorders, National Institutes of Health, 5 Research court, Rockville, MD, USA. [T.N. 301 496 7882; Fax: 301-402-7580 (private); Email: friedman@nidcd.nih.gov] Lawrence A. Loeb, Ex-President, American Association for Cancer Research and Director, Joseph Gottstein Memorial Cancer Res. Lab., K-Block, Health Sciences Building, University of Washington, Seattle, WA98195, USA. [T.N.206-435-6015; Fax: 206-543-3967; Email: lploeb@excite.com, phyllisloeb@earthlink.net] Dennis Drayna, Chief, Section on Systems Biology of Communication Disorders Laboratory of Molecular Genetics, National Institute of Deafness and Communication Disorders,5 Research court, Rockville, MD, USA. Email: drayna@nidcd.nih.gov Amir Muhammed, Rector, National University of Computer & Emerging Sciences, Founding Member BOG, CEMB, FAST House, Rohtas, Road, Sector G-9/4, Islamabad, Pakistan. [Tel: 92-51-2855072-4; Fax: 92-51-2855075; Email: amir@nu.edu.pk] Muhammad Ashraf, PhD, Professor of Pathology, Pathology & Lab Med, University of Cincinnati, MSB 1253A, P. O. Box 670529, Cincinnati OH 45267 [Tel: (513)558-0145; Email: muhammad.ashraf@uc.edu] 53