DPHS 568 Biostatistics in Dentistry, Summer 2006 Homework #1 Due July 19, 2006 (beginning of class). If more than one sheet, please staple. Table 1 i xi 1 4 2 -3 4 1. Using the data in Table 1 evaluate xi , and i 1 3 8 4 2 4 x i 1 2 i . 2. Refer to the data in Table 2: Mercury Vapor Data. a. Compute the mean, median and standard deviation of the urinary-Hg values for all the study participants. b. Draw a histogram describing urinary-Hg data. 3. Refer to the data in Table 2: Mercury Vapor Data. a. Compute appropriate descriptive statistics comparing the case and control participants with respect to fish consumption. b. Present this comparison using boxplots. c. What is your overall impression concerning the fish consumption in the two groups? 4. In the NHANES3 dataset the percentage of 25-34 year-olds with a decayed, missing or filled (DMF) upper left first bicuspid is about 35%. Similarly 35% of these people have a DMF upper right first bicuspid. Both upper first bicuspids are DMF in 28% of this cohort. a. Do these data imply that DMF in the upper left first bicuspid is independent of DMF in the upper right first bicuspid? b. What is the probability that someone has at least one DMF upper first bicuspid? c. What is the conditional probability that the upper left first bicuspid is DMF if the upper right one is? d. What is the conditional probability that the upper left first bicuspid is DMF if the upper right one is not? (Hint: Venn diagram may help.) 5. Suppose we planned to use periodontal assessment as a diagnostic test for future CHD risk. We can evaluate the worth of this diagnostic marker using the data in Table 3: Periodontal disease vs. future CHD risk. Consider the “disease” in this case to be developing CHD within 10 years. a. Compute the sensitivity and specificity of the test if we label someone as positive if they have periodontitis or are edentulous. b. Compute the relative risk of developing CHD within 10 years if one either has periodontitis or is edentulous as compared to someone with healthy gums or gingivitis. c. What different kinds of information are given by the answers to a. and b.? 6. Suppose 7 out of 18 students in a grade-school class develop influenza, whereas the nationwide rate for grade-schoolers is 20%. a. Is there evidence of an excessive number of cases in this class? That is, compute the probability of having at least 7 cases in this class if the nationwide rate holds true. b. If the nationwide rate held true, how many kids would be expected to develop influenza? 7. For individuals over 60 years of age in the NHANES 3 study, of those who had never smoked 7% had periodontitis (as evidenced by at least one site out of 28 with attachment loss 6mm or greater) while 15% of former and current smokers had periodontitis. a. What is the probability that exactly 2 of 10 smokers has periodontitis? b. What is the probability that at least 2 of 10 smokers have periodontitis? c. Suppose we have a group of 10 smokers and 10 never smokers. Compute the probability that exactly 3 have periodontitis. Hint: Using Excel could help compute binomial probabilities. 8. Let Z be a Standard Normal random variable. a. What is Pr(Z < 0.72)? b. What is Pr(Z > 1.2)? c. What is Pr(0.72 < Z < 1.20)? 9. Suppose that total carbohydrate intake in 12- to 14-year-old boys is normally distributed with mean 124 g/1000 cal and standard deviation of 20 g/1000 cal. a. What percentage of boys in this age range have carbohydrate intake above 140 g/1000 cal? b. What percentage of boys in this age range have carbohydrate intake below 100 g/1000 cal? c. Suppose we randomly sampled four such boys. What is the probability that the average carbohydrate intake of these four boys would be above 140 g/1000 cal? Table 2: Mercury Vapor Data ID GROUP* age daily inhaled Urinary Hg occlusal total amalgam amalgam Hg vapor (g (nmol Hg/l surfaces surfaces Hg/24 hr) creatinine) Fish consumption (meals/month) 1 CASE 44 13 43 1.6 0.8 8.0 2 CASE 42 13 46 2.1 1.0 2.0 3 CASE 43 10 30 2.6 2.2 4.0 4 CASE 43 19 68 4.1 3.6 10.0 5 CASE 40 20 48 4.6 1.4 6.0 6 CASE 36 11 24 0.3 1.7 4.0 7 CASE 49 13 39 1.4 1.7 4.0 8 CASE 62 4 34 0.6 2.0 7.0 9 CASE 47 14 62 1.7 0.9 5.0 10 CASE 40 13 50 1.2 1.0 4.0 11 CONTROL 45 16 63 6.1 7.1 3.0 12 CONTROL 43 11 43 3.0 2.4 3.0 13 CONTROL 47 12 31 2.4 3.3 4.0 14 CONTROL 34 11 25 0.7 1.5 8.0 15 CONTROL 41 10 24 0.4 1.4 5.0 16 CONTROL 40 15 46 0.6 4.7 1.0 17 CONTROL 42 12 45 2.5 3.8 3.0 18 CONTROL 48 16 50 3.8 3.3 2.0 Data from: Berglund A, Molin M: "Mercury vapor release from dental amalgam in patients with symptoms allegedly caused by amalgam fillings." European Journal of Oral Sciences (1996): 104: 56-63 * "Cases" are participants complaining of symptoms possibly associated with mercury. Table 3: NHANES I, : Periodontal disease vs. future CHD risk 10 year CHD incidence no yes Healthy Gingivitis Periodontal classifcation Perio. Edentulous Total Total Count 3622 187 3809 % 95.1 4.9 100 Count 2308 150 2458 % 93.9 6.1 100 Count 1657 258 1915 % 86.5 13.5 100 Count 1823 457 2280 % 80.0 20.0 100 Count % 9410 89.9 1052 10.1 10462 100