Supplementary 1 Quantitative HBeAg assay HBeAg-positive samples were subjected to quantitative measurement using protocol recently developed by Wursthorn et al (18) for the quantitative determination of HBeAg using the Elecsys® HBeAg immunoassay (Roche Diagnostic GmbH, Manheim, Germany). The Elecsys® HBeAg immunoassay is an electrochemiluminescence immunoassay (ECLIA) for qualitative detection of HBeAg in human serum and plasma. A restricted range of Cut-off index (COI) has been validated to show linear association with HBeAg titer, allowing this system to be used for quantification of serum HBeAg. This linearity was established by measuring a range of serial dilutions of recombinant HBeAg using five different diluents (HBeAg-negative/anti-HBe-negative diluent, Elecsys Universal Diluent, HBeAg-negative/anti-HBenegative human serum, horse serum and phosphate-buffered saline). Using the Paul Ehrlich Institute (PEI) international reference standard serum, conversion factor was established as 4.5 COI for 1 PEIU/mL, corresponding to 0.222 PEIU/mL for a COI of 1. An assay with an initial dilution step of 1:40 is considered to provide accurate assessment of the majority of samples encountered in clinical practice. An algorithm has been developed for the quantification of HBeAg using the Elecsys® HBeAg assay. In this study, serum samples were diluted 1:40 in Elecsys Universal Diluent and assayed using a Roche Cobas® e411 Immunoanalyzer following the manufacturer’s instructions. Resulting COIs between 1 and 1000 were converted to PEIU/mL by multiplying the COI values with the conversion factor 0.222 and the dilution factor 40. Samples with COIs < 1 were re-assayed undiluted, and the resulting COIs were multiplied with 0.222. Meanwhile, samples with COIs >1000 were further diluted and re-assayed, and the resulting COIs were multiplied with the dilution factors (40 and the second dilution factor) and 0.222. An example of calculating the results of HBeAg quantification is shown below: Example of calculating results of HBeAg quantification using the Elecsys® HBeAg assay* No. 1 2 3 COI of initial assay (1:40 dilution factor) <1 10 >1000 COI of repeated assay (undiluted) COI of repeated assay (further 1:4 dilution factor) 5 N/A N/A N/A N/A 750 Conversion from COI to PEIU/mL (COI*dilution factors*0.222) 5*1*0.222 10*40*0.222 750*4*40*0.222 HBeAg level (PEIU/mL) 1.11 8.88 26,640 * based on Wursthorn K et al. Development of a protocol for the quantitative determination of HBeAg using the Elecsys® immunoassay. J Viral Hepat 2011;18(7):179-183 COI: Cut-off Index PEI: Paul Erlich Institute, used as international reference standard for HBeAg level HBeAg