Names of Group Members: In this activity you will construct the gene for insulin, replicate it via DNA synthesis, and then build the insulin polypeptide via protein synthesis and posttranslational modifications. Each group should consist of five members. For each group, you will assign a group leader to read the instructions, assign jobs, and make sure everyone is doing their job correctly. Group #: Cytosol The coding region of the insulin gene is 330 nucleotides long. This is the region responsible for the actual amino acid sequence. In addition to the coding region, genes contain regulatory regions involved in turning the gene on and off, and needed for signaling the start and end of the genes. Non-coding regions are also involved in directing post-translational modifications to the protein. ER Lumen The insulin gene actually codes for preproinsulin, a polypeptide that consists of 110 amino acids. However, preproinsulin is converted to insulin during post transcriptional modifications that include removing two segments of the protein (the D chain and the C chain), leaving behind the A chain and the B chain, which are held together via two disulfide bonds. Golgi Secretory Vesicle Part 1 Constructing Your Template DNA Work together to cut out the nucleotides and tape them together to form the insulin gene. Use the sequence analysis paper showing the mRNA sequence for insulin and the corresponding sequence of amino acids as your guide. Things to consider: You have been given the mRNA sequence, which you need to convert into the DNA sequence. Your DNA should be double-stranded and composed of two complementary strands not two identical strands. Tape covalently bonded nucleotides directly to one another (DNA backbone) but leave a small space of clear tape between hydrogen-bonded nucleotides (between two nitrogenous bases) to indicate H-bonds. When the oxygen of a phosphate covalently bonds to deoxyribose, a hydroxyl group (OH) from the deoxyribose combines with a hydrogen ion and is lost as water (H2O). The 3’ end has a free deoxyribose and the 5’ end has a free phosphate. Part 2 Replicating Your DNA In DNA replication, the double helix is unwound, the hydrogen bonds are broken, and each complementary strand is used as a template to build a new double-stranded DNA dimer. DNA synthesis is said to be semi-conservative because each resulting DNA dimer is composed of a strand of the original DNA (conserved) and a complementary new strand of DNA (just synthesized). Assign one group member to play each role below. Team Leader: read the directions and make sure the daughter strands are correctly synthesized. _________________________ Name Topoisomerase: unwinds the DNA double helix ahead of the replication fork. Helicase: breaks the hydrogen bonds between complementary bases ahead of the replication fork (use scissors - try to keep about 10 bases ahead of the replication fork and only break the next H-bond after each nucleotide is added to each new strand being synthesized). Primase: specialized RNA polymerase that builds a five nucleotide-long segment of RNA (primer) at the start of the leading strand and after every 100 nucleotides of the lagging strand. DNA polymerase: reads a strand in the 3’ to 5’ direction matching complementary bases to it and covalently bonding them together to build a complementary strand in the 5’ to 3’ direction. The DNA polymerase on the leading strand replicates continuously, while the DNA polymerase on the lagging strand releases the DNA at the end of each Okazaki fragment and reconnects at the end of the next primer (where the next Okazaki fragment will start). RNase H: digests the RNA primer after its been used by DNA polymerase to get started DNA polymerase: fills in DNA nucleotides where the RNA nucleotides were DNA Ligase: seals holes in the DNA backbone left by removal of the RNA primers by forming a covalent bond between the unconnected deoxyriboses and phosphates _________________________ Name You need two DNA polymerases, one for the leading strand and one for the lagging strand: _______________________________ Name _________________________ Name _________________________ Name RNA Nucleotides for the Primer and mRNA U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U U C C C C C C C C C C C C C C C C U U U U U U RNA Nucleotides for the Primer and mRNA G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G RNA Nucleotides for the Primer and mRNA C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C RNA Nucleotides for the Primer and mRNA A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C C C C C C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A