FINAL EXAM STUDY GUIDE KEY GENETICS Mendel: “father” of genetics, worked with pea plants, determined two laws for heredity, studied heredity traits Mendel’s 2 laws of inheritance - The Law of Segregation: during the formation of gametes, alleles responsible for a trait separate; this allows for recombination during fertilization. - The Law of Independent Assortment: alleles responsible for different traits are distributed to gametes (and thus the offspring) independently of each other. F1/F2 generation: F1: The first filial generation, which is comprised of offspring(s) resulting from a cross between strains of distinct genotypes F2: The second filial generation, which is comprised of offspring(s) resulting from a cross between the F1 generation Punnett square: diagram that is used to predict an outcome of a particular cross or breeding experiment Heredity: passing of traits to offspring from its parents or ancestor Crossing-over: accounts for genetic variation due to the swapping of genetic material during prophase I of meiosis Homozygous, pure bred: refers to having identical alleles for a single trait (ex: TT, tt) Heterozygous, hybrid: refers to having different alleles for a single trait (ex: Tt) Dominant/recessive: dominant traits are shown more often in phenotype and have the ability to mask the recessive traits Genotype, phenotype, allele: genotype is the genetic makeup of a gene and phenotype is the physical representation of the trait. An allele is the letter representation of the trait Haploid/diploid: haploid is half the amount of chromosomes (ex: an egg/sperm cell) and diploid means two copies of each chromosome Co dominance: When both alleles are dominant and are BOTH EXPRESSED to make a third phenotype Incomplete Dominance: When both alleles are dominant and are BLENDED to make a third phenotype Sex-Linked (give an example): traits that occur on sex chromosomes (ex: colorblindness, hemophilia) Multiple allele traits: traits that use more than 2 alleles (ex: blood typing I A, IB, i) Sex chromosomes: Male: XY/Female: XX Karyotype (know how to read and analyze): can determine sex of the individual and whether there is a nondisjunction chromosomal disorder (below is a male with no chromosomal disorder) Be able to analyze blood types as co-dominant and multiple alleles Be able to set up and complete a dihybrid Punnett square and analyze probability ratios for genotype and phenotype. Homologous/Non-homologous chromosomes: chromosome pairs of approximately the same length, centromere position, and gene locations. Non-homologous are not the same Mutations of gametes: Deletion, inversion, translocation, non-disjunction Are mutations good or bad? Or neutral? Can be all of the above How is Down’s syndrome caused? Non-disjunction mutation during meiosis where there is an extra chromosome number 21 Pedigree chart (know how to read and analyze): DNA, RNA, & PROTEIN SYNTHESIS Know differences and similarities between DNA and RNA Monomer of nucleic acid: nucleotide Parts of a nucleotide: sugar, phosphate group, nitrogenous base Chargaff’s Rule: complimentary base pairing where A=T, G=C Codon: three letter sequence that codes for an amino acid mRNA: messenger RNA, recipe for protein rRNA: ribosomal RNA, make up ribosomes tRNA: transfer RNA, brings amino acids to the ribosome to assemble protein Know how to determine complimentary strands of RNA from DNA sequence Ex: ATTGCGATCGAT A=T, G=C Ex: TAACGCTAGCTA Transcription: process of DNA being coded into RNA Translation: process of RNA being coded into a protein HISTORY OF LIFE Spontaneous generation: obsolete body of thought on the ordinary formation of living organisms without descent from similar organisms Biogenesis: process that living things come into existence from other living things Redi’s experiments: Pasteur’s experiments: Spallanzani’s experiments: Miller and Urey’s experiments: Oparin’s beliefs: hypothesized that the formation of amino acids and proteins from non-living chemicals Age of Earth: approximately 4.6 billion years old Half-Life: time required for a quantity of radioactive isotopes to fall to half its value as measured at the beginning of the time period to determine age of something Isotope: element with more or less neutrons Be able to calculate half-life: If the half-life of (carbon 14-12) is 5,000 years old, how many halflives did carbon go through to be 15,000 years old. How much parent material is left over, how much daughter material is left over? 3 half-lifes, there is 1/8 of C-14 left Evolution of DNA/RNA-which came first? RNA came first and then DNA Examples of Fossils: bones, remains on rocks, impressions First living organisms that exist today: prokaryotic and heterotrophic EVOLUTION Darwin: “father” of evolution, established that all species of life have descended over time from common ancestors, and proposed the scientific theory that this branching pattern of evolution resulted from a process that he called natural selection, in which the struggle for existence has a similar effect to the artificial selection involved in selective breeding Were his ideas accepted at first? No since many scientists had only religious beliefs Darwin’s trip on the Beagle: Idea of a common ancestor: theory that organisms evolved from one common organism and later speciation lead them to differ Adaptation: a change in an organism to better suit the environment Natural Selection and the importance of genetic variation (peppered moth color): nature choosing which organisms are best adapted for their environment to mate with, idea of survival of the fittest where the organisms that survive are best adapted for their surroundings and will be able to reach sexual maturity and reproduce Explain the peppered moth scenario in England during industrial revolution. What is industrial melanism? Originally, the vast majority of peppered moths had light coloration, which camouflaged them against the light-colored trees and lichens which they rested upon. However, because of widespread pollution during the Industrial Revolution in England, many of the lichens died out, and the trees that peppered moths rested on became blackened by soot, causing most of the light-colored moths to die off from predation. At the same time, the dark-colored moths flourished because of their ability to hide on the darkened trees. Homologous structures (explain) and how they can be proof of a common ancestor and show similar DNA base patterns in different species that are related: may not necessarily perform the same function but they share a common ancestral origin Analogous structures: s of different species having similar or corresponding function but not from the same evolutionary origin Vestigial structures: remnants of structures found in the ancestral species (ex: appendix, tailbone) Gradualism: most evolution is marked by long periods of evolutionary stability Divergent Evolution: accumulation of differences between groups which can lead to the formation of new species Convergent Evolution: process whereby organisms not closely related independently evolve similar traits as a result of having to adapt to similar environments Co evolution: when 2 or more organisms evolve together Speciation and how it can occur by geographic isolation (CA Salmander): speciation that occurs when populations of the same species become isolated from each other to an extent that changes their genetic makeup Lamarck-acquired characteristic theory: idea that an organism can pass on characteristics that it acquired during its lifetime to its offspring Hardy-Weinberg Equilibrium populations: 5 factors that exist in an evolving population (understand what they mean) 5 factors that do not exist in an evolving population, but exist hypothetically in a H-W equilibrium population If 36% of a dog population are recessive for white fur, what is the genotypic percentages of the rest of the dominant genotypes for black fur AA and Aa? Show your work. q2= 36%, q= 6%, p= 4%, p2= 16%, 2pq= 48% AA = p2 = 16% and Aa = 2pq = 48% If 16% of a yellow bird population is recessive for yellow feathers, find the percentages of the 2 other genotypes for the dominant red feathers RR and Rr. Show your work. q2= 16%, q= 4%, p= 6%, p2= 36%, 2pq= 48% AA = p2 = 36% and Aa = 2pq = 48% BIOTECHNOLOGY (GENE TECHNOLOGY) Genome: all of an organisms genetic information Gene therapy: use of DNA as a pharmaceutical agent to treat disease Operon (lac operon example – when is it on/off): operon is on when lactose is present and off when lactose is absent ( lactase enzyme is only made when needed to conserve energy) Operator: on/off switch where repressor binds Repressor: protein that binds to operator to turn operon off RNA Polymerase: enzyme that codes DNA to RNA Genetically modified foods/animals: - How do we do this? Why is this important? Give examples of kinds of genetic engineering - Specific changes introduced into their DNA by genetic engineering techniques. We can create recombinant DNA by introducing a segment of DNA from another species into an organism. This is important because we can alter nutrition of foods, sizes of crop, resistance to insects and herbicides as well as create organisms that can make human genes. Genetically modified tomatoes with arctic flounder DNA to withstand cold temperatures and bacteria cells creating insulin PCR: process of making copies of DNA segments Gel Electrophoresis: gene technology where DNA segments are arranged and organized on a gel by their size and charge Cloning: process of making identical cells Restriction Enzymes: proteins that cut specific areas on a DNA segment “Sticky ends”: over hang left from restriction enzymes cutting DNA Recombinant DNA: having DNA from 2 or more organisms in one cell Plasmid: circular chromosome found in bacterial cells that is not necessary for bacteria to live Introns: non-coded regions of DNA Exons: coded regions of DNA that exit the nucleus and code for protein Human Genome Project: project to map out all the chromosomes in our genome and explain what each one codes for ECOLOGY Ecology: study of interactions among organisms and their environment Population: sum of all the organisms of the same group or species, who live in the same geographical area, and have the capability of interbreeding Ecosystem: community of living organism in conjunction with the nonliving components of their environment Habitat: ecological or environmental area that is inhabited by a particular species of animal, plant, or other type of organism Niche: term describing the way of life of a species Food chains/food webs: linear consequence of links in a food web starting from a species that eats no other species in the web and ends at a species that is eaten by decomposers Producers, primary consumers, secondary consumers, tertiary consumers: producers create their own food and their source of energy is from the sun, primary consumers eat the producers, secondary consumers eat primary consumers, tertiary consumers eat secondary consumers Relationships (parasitism, mutualism, commensalism): Herbivore: organism that eats plants Carnivore: organism that eats meat Omnivore: organism that eats plants and meat Detrivore: organism that eats remains of animals Decomposer: organism that eats remains of animals, is a tertiary or quaternary consumer and provides energy back into the environment Understand trophic levels in a pyramid and how energy is transferred up each level and lost. Abiotic/Biotic factors: Abiotic are non-living factor, biotic are living factors that affect the organism Make a food chain and label all types of producers/consumers Lady bug, grass, hawk, fox, bird Grass lady bug bird fox hawk Producer primary consumer secondary consumer tertiary consumer quaternary consumer