Online-Only Appendix Experiment 2c – Harvesting of nervous tissues during and following intranasal and subcutaneous insulin delivery studies Following 1, 2, 4, 6 or 8 months of diabetes, mice from each cohort were sacrificed using pentobarbital intraperitoneal injections. A total of 0.5 ml of whole intracardiac blood was obtained for glycated hemoglobin measurements to be performed with affinity chromatography (Procedure 422; Sigma Diagnostics) , which measures all glycated hemoglobin and not just HbA1C.13 The following tissues were harvested: lumbar spinal cord, bilateral L3-L6 dorsal root ganglia, sciatic nerves, sural nerves, and hind and fore footpads. Blood for glycated hemoglobin measurements was taken prior to sacrifice. One half of all tissues were fixed in cacodylate buffered glutaraldehyde, then cacodylate buffer for later epon embedding for morphometric studies. The remaining tissues were o immediately fresh frozen at -80 C or placed in Trizol (Invitrogen, Burlington, ON) and o stored at -80 C. Experiment 2d –Quantitative morphometry of peripheral nerve and DRGs For peripheral nerve and dorsal root ganglia (DRG) specimens, samples were embedded in epon, cut by ultramicrotome at 1 µm and stained with 0.5% toluidine blue as previously described using stereological optical dissector techniques.13 Image analysis was performed by a single examiner blinded to the origin of the sections (Zeiss Axioskope at 400X and 1000x magnification using Scion Image v.4.0.2 (Scion Inc., Fredrick, MD, USA) with measurements of the number, axonal area, and myelin thickness of all myelinated fibers within twenty-five non-adjacent transverse nerve sections from 5-6 mice in each cohort (this was selected based upon a sample size calculation using a 5% margin of error, 95% confidence level, and estimated 10% loss of axonal fibers based upon prior work in the diabetic murine model 13,49). For DRGs, neurons with visible nuclei were used for counting within a sized area for 25 nonadjacent sections separated by approximately 300 m for each L4-6 DRG for neuronal density and total neuronal counts, again based upon similar sample size measurements. All measurements of both nerve and DRG morphometry were performed using Scion Image v.4.0.2 (Scion Inc., Fredrick, MD). Experiment 2e – Epidermal innervation Epidermal foot pads from both hindfeet and forefeet were fixed in 2% Zamboni’s fixative overnight at 4°C, washed in PBS, kept overnight in 20% glucose PBS solution, embedded in OCT embedding solution, and stored at -80°C until sectioning. Thirty µm sections were prepared using a cryostat, and samples were placed onto poly-L-lysine- and acetone-coated slides. Immunohistochemistry within foot pads was performed using the panaxonal marker PGP 9.5 to identify all epidermal axons (anti-mouse PGP 9.5 antibody (1:500, Jackson ImmunoResearch Laboratories, West Grove, PA; and secondary antibody (anti-goat IgG FITC, 1:100, Chemicon Int., Temecula, CA)). Analysis of epidermal fibres within foot pads was performed as described previously.18 Quantification was performed with two methods: 1) area densities identifying epidermal nerve fibres extending above the dermal papillae quantified per square millimeter of epidermal area; 2) linear densities calculating the number of fibres within a length of each microsection expressed as a function of epidermal length. A Zeiss fluorescent microscope with digital photography was used along with Adobe Photoshop (Adobe Photoshop 9.0, Adobe, San Jose, CA, USA, 2005) for analysis. For each animal, the number of PGP 9.5-immunoreactive profiles was counted by a single observer blinded to the source of each specimen in each of the 30 μm thick microsections, which were performed through the entire footpad. A minimum of 200 microsections was examined in each case within each cohort, based upon sample size calculations as described above. In some cases, confocal microscopy (Nikon Inc., Melville, NY) was performed for images to be demonstrated. Confocal images were obtained at heights of 1 μm at 20 adjacent levels in order to produce a fused image using Adobe Photoshop (Adobe Photoshop 7.0). A final image was achieved by overlaying confocal images obtained for PGP 9.5 and collagen type IV (1:100; Chemicon International, Temecula, CA, USA, and secondary antibody anti-donkey IgG Cy3, 1:100, Chemicon Int., Temecula, CA). Experiment 2f –Western Immunoblotting Tissue portions were homogenized using a RotorStator Homogenizer in ice-cold lysis buffer (10% glycerol, 2% SDS, 25mM Tris-HCl, pH7.4, Roche Mini-Complete Protease Inhibitors). Samples were then centrifuged at 10,000G for 15 minutes and equal amounts (15 µg) of protein were separated by SDS-PAGE using 10% polyacrylamide gels under conditions previously described.13 Blots were probed with PI3K (1:1000), PKB/Akt (1:1000), and pAkt (1:1000). The nuclear signaling transcription factor NFkB p65 and p50 subunits (1:1000 each) were also examined, and additional immunohistochemistry was performed for CREB (1:200, Abcam Inc., Cambridge, MA) and GSK3β (1:200, Abcam Inc., Cambridge, MA). For housekeeping, anti-β-actin (1:100, Biogenesis Ltd. Poole, UK) was applied to separate blots. Secondary anti-rabbit, anti-mouse, or anti-human IgG HRP Linked antibody (Cell Signaling) was applied at 1:5000 in each case as appropriate. Signal detection was performed by exposing of the blot to enhanced chemi-luminescent reagents ECL (Amersham) for two minutes. The blots were subsequently exposed and captured on Kodac X-OMAT K film. In each case, three blots were performed from different composites of mice, and analyzed with Adobe Photoshop (Adobe Photoshop 9.0, Adobe, San Jose, CA, 2005) for semi-quantification of blotting density. Experiment 2g –mRNA Quantification Total RNA was extracted from peripheral nerve and DRG using Trizol reagent (Invitrogen). Total RNA (1 µg) was processed directly to cDNA synthesis using the ® Superscript II Reverse Transcriptase system (Invitrogen). PI3K primers sequences were: Forward 5'-AACCCGGCACTGTGCATAAA-3, Reverse 5'GCCCATTGGATTAGCATTGATG-3'. Akt primers sequences were: Forward 5'TCTGCCCTGGACTACTTGCACT-3', Reverse 5'-GCCCGAAGTCCGTTATCTTGA-3'. NFκBp65 primers sequences were: Forward, 5’- TGTGCGACAAGGTGCAGAAA -3’; and Reverse, 5’- ACAATGGCCACTTGCCGAT -3’. β–actin primers sequences were: Forward, 5’-TGTTGTCCCTGTATGCCTCTGGTC-3’; Reverse, 5’ATGTCACGCACGATTTCCCTCTCTC-3’. RT-PCR was done using SYBR Green dye. All reactions were performed in triplicate in an ABI PRISM 7000 Sequence Detection System. Data were calculated by -∆∆CT the 2 method and are presented as the fold induction of mRNA for RAGE in diabetic tissues normalized to, β–actin compared to non-diabetic tissues (defined as 1.0-fold). Experiment 2h – Electrophoretic Mobility Shift Assay Quantification For evaluation of CREB binding to DNA within lumbar dorsal root ganglia, nuclear proteins were extracted with NE-PERTM Nuclear and Cytoplasmic Extraction Reagents (Pierce, Rockford, IL). Protein–DNA complexes were detected using biotin end-labeled double-stranded DNA probes prepared with the Biotin 3′ End DNA Labeling Kit (Pierce). The binding probe used for CREB was 5'-ACGCTGC[[TGACGTCA]]GCAAAT-3’, with the binding site indicated in square brackets. Electrophoretic mobility shift assay (EMSA) was performed with a LightShift Chemiluminescent EMSA Kit (Pierce). Briefly, nuclear extracts (10 μg protein) and the 10 × binding buffer with 2.5% glycerol, 5 mM MgCl2, 50 ng/μL poly (dI-dC), 0.05% NP-40, 1 mM DTT, and 20 fmol biotin 3′-end labeled double-stranded oligonucleotide were incubated at room temperature for 1 hour in a volume of 20 μL. For CREB supershift analysis, an anti-CREB (Abcam Inc., Cambridge, MA; 1 μg per reaction) polyclonal antibody was incubated with the nuclear proteins on ice for 1 hour before labeled oligonucleotide was added. Reaction products were separated by electrophoresis (5% acrylamide [29:1 acryl/bis]) in 0.5 × TBE. After electrophoresis, the protein–DNA complexes were transferred onto nylon membranes and detected using chemiluminescence (LightShift kit; Pierce). Supplementary Table 1 – Morphological properties of sciatic nerves in non-diabetic and diabetic nerves from mice receiving intranasal or subcutaneous insulin or saline after 8 months of diabetes Physical Property 8 Months of Diabetes 2 Axonal fiber density (per mm ) Non-Diabetic I-I Mice (n=6) 15024 +/- 235 Non-Diabetic I-S Mice (n=6) 14793 +/- 241 Non-Diabetic S-I Mice (n=6) 14918 +/- 263 Non-Diabetic S-S Mice (n=6) 14714 +/- 221 Diabetic I-I Mice (n=5) 14622 +/- 369 Diabetic I-S Mice (n=4) 14606 +/- 376 Diabetic S-I Mice (n=5) 14607 +/- 291 Diabetic S-S Mice (n=5) 14598 +/- 302 2 Axonal area (µm ) Non-Diabetic I-I Mice (n=6) 38.3 +/- 0.5 Non-Diabetic I-S Mice (n=6) 37.7 +/- 0.6 Non-Diabetic S-I Mice (n=6) 38.2 +/- 0.6 Non-Diabetic S-S Mice (n=6) 37.9 +/- 0.4 Diabetic I-I Mice (n=5) 34.9 +/- 0.7*& Diabetic I-S Mice (n=4) 31.7 +/- 0.6* Diabetic S-I Mice (n=5) 32.9 +/- 0.7* Diabetic S-S Mice (n=5) 31.6 +/- 0.6* Myelination Thickness (µm) Non-Diabetic I-I Mice (n=6) 1.08 +/- 0.04 Non-Diabetic I-S Mice (n=6) 1.03 +/- 0.03 Non-Diabetic S-I Mice (n=6) 1.09 +/- 0.04 Non-Diabetic S-S Mice (n=6) 1.02 +/- 0.04 Diabetic I-I Mice (n=5) 0.97 +/- 0.03*Φ Diabetic I-S Mice (n=4) 0.89 +/- 0.04* Diabetic S-I Mice (n=5) 0.94 +/- 0.05* Diabetic S-S Mice (n=5) 0.90 +/- 0.06* All measures are mean +/- SEM. * indicates significance at p<0.05 with comparison to non-diabetic mice cohort groups; diabetic cohort groups; and Φ & indicates significance with comparison to other indicates significance with comparison to S-S and I-S diabetic cohort groups using multiple ANOVA testing with Bonferroni post-hoc t-test comparisons (α=0.05, p<0.0125). (non-matched ANOVA tests, F-values range between 0.77-2.84 for indicated groups and time points, DF=4,3, n=4-6). Supplementary Figure 1 – Morphological assessment of the sural and sciatic nerves from diabetic and non-diabetic mice using semithin sections stained with toluidine blue. Images of the sural nerve of a D I-S mouse (A), D I-I mouse (B), C I-S mouse (C), C I-I mouse (D) are demonstrated. Axonal area histograms for sural nerves demonstrated a leftward shift indicating axonal atrophy (E) (Tukey's Honestly Significant Difference Test, * p<0.05, see Table 2 for mean values) for D I-S, D S-S and D S-I mice when compared to each of the non-diabetic mouse cohorts, but not for D I-I mice. A more subtle, nonsignificant, leftward shift of diabetic mouse sciatic nerve axons was identified (F) (Tukey's Honestly Significant Difference, p=NS, see Supplementary Table 1 for mean values). Bar= 10 µm Supplementary Figure 2 – Morphological assessment of the dorsal root ganglia (DRG) from mice with and without diabetes using semithin sections and toluidine blue staining. Diabetes was associated with greater age-dependent atrophy of DRG neurons (see Supplementary Table 2). Images of a DRG of a D I-S mouse (A), D I-I mouse (B), C I-S mouse (C), C I-I mouse (D) are demonstrated. An axonal area histogram for DRG neuronal size demonstrates a leftward shift indicating neuronal atrophy for diabetic S-S and S-I mice (E) (Tukey's Honestly Significant Difference Test, * p<0.05, see Supplementary Table 2 for mean values), while D S-I and D I-I mice did not have significant differences for histogram purposes when compared to non-diabetic mouse cohorts. Bar=15 µm. Supplementary Figure 3 – Quantification of CREB protein interaction with DNA through EMSA revealed suppressed interaction in DRG from diabetic mice with partial re-establishment in those receiving insulin delivery (A), greatest in the D I-I cohort (B). Analysis was performed with multiple ANOVA tests, with * indicating significant difference (p<0.0125) between groups indicated by horizontal bars(non-matched ANOVA tests, F-values range between 1.44-5.76 for indicated groups and time points, DF=2,3, n=3). All diabetic values were significantly less than non-diabetic values with the exception of the D I-I cohort (significance not visually demonstrated).