The University of Jordan Faculty of Agriculture Dept. Horticulture & Crop Science ------ Semester, 201-/201- Quantitative Genetics in Plant Breeding (0601933) Instructors: Name Dr. Muhanad Akash, Office Number 291 Phone 22340 E-mail Hours TBA makash@ju.edu.jo Course Objectives: The course objective is to introduce models and tools to students and apply them in a variety of contexts to enable students to approach and resolve quantitative problems in their own genetical research. Learning Outcomes: A) knowledge and understanding: This course is oriented toward understanding genotypic and environmental values, their effects and interactions, homeostasis, stability analyses, variances and covariances, combining ability analyses, genetic advance from selection, index selection, molecular markers in plant breeding, and quantitative trait loci (QTL) mapping. B) Intellectual skills (cognitive and analytical): a. Achieve maximum benefits from quantitative experiments. b. Ability to interpret results efficiently C) Subject specific skills: a. Understand wide range of quantitative topics b. Computer software applications D) Transferable skills a. Ability to emphasis on laboratory-oriented sciences research problems b. Using scientific software c. Data analysis and interpretation d. Presentation and discussion Teaching Methods: 1. Duration: 16 weeks, 48 hours in total 2. Lectures: 2 per week (including one 1-hour exams) 3. Assignments: to be notified 1 Testes and Evaluations: 1. Exams: a. Mid exam 25% b. Second exam 25% c. Final exam 40% 2. Quizzes, assignments, presentation, open discussions 10% Assignments: Assignments/practical exercises on specific topics will be given as needed. Each assignment must be turned in when due to earn full credit Course Contents and Schedule Topics # Lectures 1. Introduction 1 2. Inbreeding, Coancestry 1 3. Half sibs, Full sibs (variances) 1 4. Epistatic variances, Combining ability 1 5. Diallel method I, II, III and IV 2 6. Computerized diallel analyses (Statistical Analysis System) 1 7. Generation Mean Analysis 1 8. North Carolina Designs I, II, and III 1 9. Additive Genetic Correlations 1 10. Heritability and Genetic Advance 1 11. Correlated Response 0.5 12. Selection indices construction & evaluation 1 13. Molecular Markers in Plant Breeding 1 14. Quantitative Trait Loci (QTL) Mapping 1 15. Computer Software Applications 1.5 2 Textbook - Kang M. S. Applied Quantitative Genetics. 1994. - Falconer, D.S., and T.F.C. Mackay. 1996. Introduction to Quantitative Genetics. 4th ed. Prentice Hall, Harlow, U.K. References and Supporting Material - Lynch, M., and B. Walsh. 1998. Genetics and analysis of quantitative traits. Sinauer Associates, Sunderland, MA. - Walsh, B., and M. Lynch. Evolution and Selection of Quantitative Traits. - Hallauer, A.R., and .T. B. Miranda. 1988. Quantitative Genetics in Maize Breeding. Iowa State University Press. - Kang, M. S., and H. G. Gauch, .Ir. 1996. Genotype-by-Environment Interaction. CRC Press, Boca Raton, FL. - Kang, M. S. 2002. Quantitative genetics, genomics and plant breeding. CABI, NY - Dudley, J. W. 1997. Quantitative genetics and plant breeding. Advances in Agronomy 59: 1-23. - Kang, M. S. 1998. Using genotype-by-environment interaction for crop cultivar development. Advances in Agronomy 62: 199-252. - Nyquist, W. E. 1991. Estimation of heritability and prediction of selection response in plant populations. Crit. Rev. Plant Sci. 10 :235-322. 3