Ciancio, G., Burke, G., Gaynor, J., Mattiazzi, A., D. Roth, Kupin, W., Nicolas, M., Ruiz, P., Rosen, A. and J. Miller. A randomized long-term trial of tacrolimus/sirolimus vs tacrolimus/mycophenolate mofetil vs cyclosporine (Neoral®)/sirolimus in renal transplantation. I. Drug interactions and rejection at one year. Transplantation 77:24451, 2004. Ciancio, G., Burke, G., Gaynor, J., Mattiazzi, A., D. Roth, Kupin, W., Nicolas, M., Ruiz, P., Rosen, A. and J. Miller. A randomized long-term trial of tacrolimus/sirolimus vs tacrolimus/mycophenolate mofetil vs cyclosporine (Neoral®)/sirolimus in renal transplantation. II. Survival, function, and protocol compliance at one year. Transplantation, 77:252-258, 2004. Tryphonopoulos, P., Kato, T., Ruiz, P. and A. Tzakis. Epithelial and hematopoietic cell tissue chimerism in the allograft of intestinal transplant recipients. Transplantation Proceedings, 36:359-360, 2004. Elliott, M.K., Jarmi, T., Ruiz, P., Holers, M. and G.S. Gilkeson. Effects of complement factor D deficiency on the renal disease of MRL/lpr mice. Kidney International, 65:129138, 2004. Garcia, M., Weppler, D., Mittal, N., Nishida, S., Kato, T., Tzakis, A. and P. Ruiz. CAMPATH-1H immunosuppressive therapy reduces the incidence and intensity of acute rejection in intestinal and multivisceral transplantation. Transplantation Proceedings, 36:323-324, 2004. Wasserberg, N., Tzakis, A., Santiago, S., Ruiz, P., and. S.K. Salgar. Anastomotic healing in a small bowel transplantation model in the rat. World Journal of Surgery, 28:69-73, 2004. Ruiz, P., Soares, M.F., Garcia, M., Nicolas, M., Kato, T., Mittal, N., Nishida, S., Levi, D., Selvaggi, G., Madariaga, J. and A. Tzakis. Lymphoplasmacytic hyperplasia (possible pre-PTLD) has varied expression and appearance in intestinal transplant recipients receiving campath immunosuppression. Transplantation Proceedings, 36:386-387, 2004. Salgar, S., Yang, D., Ruiz, P., Miller, J. and A. Tzakis. Viral interleukin-10 engineered autologous hematopoietic stem cell therapy: a novel gene therapy approach to prevent graft rejection. Human Gene Therapy, 15:131-144, 2004. DeFaria, W., Tryphonopoulos, P., Kleiner, G., Santiago, S., Gandia, C., Ruiz, P. and A. Tzakis. Study of the development and evolution of neo-intestine in a rat model. Submitted for publication. Transplantation Proceedings, 36:375-376, 2004. Delacruz, V., Garcia, M., Mittal, N., Nishida, S., Levi, D., Selvaggi, G., Madariaga, J., Weppler, D., Tzakis, A. and P. Ruiz. Immunoenzymatic and morphologic detection of epithelial cell apoptotic stages in gastrointestinal allografts from multivisceral transplant patients (MVTx). Transplantation Proceedings, 36:338-339, 2004. Garcia, M., Delacruz, V., Ortiz, R., Bagni, A., Weppler, D., Kato, T., Tzakis, A. and P. Ruiz. Acute rejection grading scheme for human gastric allografts. Human Pathology, 35:343-349, 2004. Salgar, S.K., Yang, D., Ruiz, P., Miller, J. and A.G. Tzakis. Viral interleukin-10 gene therapy to induce tolerance to solid organ transplants in mice. Transplantation Proceedings, 36:397-398, 2004. Tryphonopoulos, P., Espana, E., Scheffer, C.G., Tseng, C., Tzakis, A. and P. Ruiz. Rat enterocyte cultures on human amniotic membranes. Transplantation Proceedings, 36:373-374, 2004. Pappas, P.A., Tzakis, A.G., Saudubray, J-M., Gaynor, J., Carreno, M., Huijing, F., Kleiner, G., Rabier, D., Kato, T., Levi, D.M., Nishida, S., Gelman, B., Thompson, J.F., Mittal, N. and P. Ruiz. Trends in Serum Citrulline and Acute Rejection Among Recipients of Intestinal Transplant. Transplantation Proceedings, 36:345-347, 2004. Ruiz, P., Bagni, A., Brown, R., Cortina, G., Harpaz, N., Magid, M.S. and J. Reyes. Histological criteria for the identification of acute cellular rejection in human small bowel allografts - Results of the Pathology Workshop at the VIII International Small Bowel Transplant Symposium. Transplantation Proceedings, 36:335-337, 2004. Nishida, S., Hadjis, N., Levi, D., Kato, T., Vaidya, A., Nery, J., Madariaga, J., Nakamura, N., Ruiz, P., Neff, G., Byers, P. and A. Tzakis. Intestinal and multivisceral transplantation following abdominal trauma. Journal of Trauma-Injury Infection and Critical Care 56:323-327, 2004. Ciancio, G., Burke, G., Gaynor, J., Mattiazzi, A., Roohipour, R., Carreno, M., Roth, D., Ruiz, P., Kupin, W., Rosen, A., Esquenazi, V., Tzakis, A. and J. Miller. The use of CAMPATH-1H as induction therapy in renal transplantation: preliminary results. Transplantation 78:426-433, 2004. Kato, T., Ruiz, P. And A. Tzakis. Exfoliative bowel rejection – a dangerous loss of integrity. Pediatric Transplantation 8:426-427, 2004. Fan, X., Ang, A., Pollack-Bar Ziv, S.M., Dipchand, A.I., Ruiz, P., Wilson, G. and L.J. West. Donor-specific B cell tolerance after ABO-incompatible infant heart transplantation. Nature Medicine, 10(11); 1227-1233, 2004. Neff, G., O’Brien, C., Shire, N., Montalbano, M., Ruiz, P., Nery, C., Safdar, K., Medina, M., Hung, O., Tzakis, A. and E.R. Schiff. Outcomes in liver transplant recipients with hepatitis B virus: reistance and recurrence patterns from a large transplant center over the last decade. Liver Transplantation 10:1372-8, 2004. Zhang, X.K., Gallant, S., Molano, I., Moussa, O.M., Ruiz, P., Spyropoulos, D.D., Watson, D.K., and G. Gilkeson. Decreased expression of the Ets family transcription factor Fli-1 markedly prolongs survival and significantly reduces renal disease in MRL/lpr mice. Journal of Immunology, 173:6481-6489, 2004. Walker, P., Cavallo, T., Bonsin, S. and the Ad Hoc Committee on Renal Biopsy Guidelines of the Renal Pathology Society. Practice guidelines for the renal biopsy. Contributor. Modern Pathology 17: 1555-1563, 2004. Rosado, M., Morgansztern, D., Ruiz, P. and I. Lossos. Chronic lymphocytic leukemia – associated nephrotic syndrome caused by focal segmental glomerulosclerosis. American Journal of Hematology 77:205-6, 2004. Neff, G., O’Brien, C.B., Cirocco, R., Montalbano, M., Ruiz, P., Khaled, A., Bejarano, A., Safdar, K., Tzakis, A. and Schiff, E. Prediction of sustained Virological Response (SVR) in Liver Transplant Recipients with recurrent Hepatitis C Virus (HCV) Following Combination Pegylated Interferon alfa-2b and Ribavirin Therapy Using Tissue hepatitis C virus reverse transcriptase polymerase chain reaction testing. Liver Transplantation 10 (5): 595-598, 2004. Reilly, C.M., Mishra, N., Miller, J., Joshi, D., Ruiz, P., Richon, V., Marks, P. and G. Gilkeson. Modulation of renal disease in mRL/lpr mice by suberoylanilide hydroxamic acid. Journal of Immunology 173(6):4171-8, 2004. Tzakis, A.G., Tryphonopoulos, P., Kato, T., Nishida, S., Levi, D.M., Madariaga, J.R., Gaynor, J.J., DeFaria, W., Regev, A., Esquenazi, V., Weppler, D., Ruiz, P., and J. Miller. Preliminary experience with Alemtuzumab (Campath 1H) and low-dose tacrolimus immunosuppression in adult liver transplantation. Transplantation 77(8):1209-14, 2004. Neff, G., Ruiz, P., Montalbano, M., Meyer, D. and C. O’Brien. Sirolimus-associated hepatotoxicity in liver transplantation. Annals of Pharmacotherapy. 38(10):1593-6, 2004. Montalbano, M., Neff, G.W., Yamashiki, N., Meyer, D., Bettiol, M., Slapak-Green, G., Ruiz, P., Mantan, E., Safdar, K., O’Brien, C. and A. Tzakis. A retrospective review of liver transplant patients treated with sirolimus from a single center: an analysis of sirolimus related complications. Transplantation 78(2):264-8, 2004. Neff, G., Montalbano, M., O’Brien, C., Safdar, K., Bejarano, P., Khaled, A., Ruiz, P., Nery, J., Medina, M., Hung, O., Tzakis, A. and E.R. Schiff. Treatment of established recurrent hepatitis C in liver-transplant recipients with pegylated interferon-alfa-2b and ribavirin therapy. Transplantation. 78(9):1303-7, 2004. Schena, S., Kurimoto, Y., Fukada, J., Tack, I., Ruiz, P., Pang, M., Aitouche, A., Striker, L.J. and S.M. Pham. Effects of Ventricular Unloading on Apoptosis and Atrophy of Cardiac Myocytes. Journal of Surgical Research 120(1):119-26, 2004. Neff, G.W., Nery, J., Lau, D., O’Brien, C., Duncan, R., Ruiz, P., Montalbano, M., Muslu, H., Safdar, K., Tzakis, A. and E.R. Schiff. Tenofovir therapy for Epivir resistance following liver transplantation. Annals of Pharmacotherapy. 38(12):1999-2004, 2004. Regev, A., Molina, E., Moura, R., Bejarano, P., Khaled, A., Ruiz, P., Arheart, K., Berho, M., Drachenberg, C., Mendez, P., O’Brien, C., Jefferes, L., Tzakis, A. and E.R. Schiff. Reliability of histopathological assessment for the differentiation of recurrent hepatitis C from acute rejection after liver transplantation. Liver Transplantation 10(10):1233-9, 2004. Neff, G., O’Brien, C., Nery, J., Shire, N.J., Nishida, S., delaGarza, J., Montalbano, M., Safdar, K., Ruiz, P., Rideman, E., Gascon, J.A., Tzakis, A., Madariaga, J. and S.M. Rudich. Factors that identify survival after liver retransplantation for allograft failure caused by recurrent hepatitis C infection. Liver Transplantation 10:1497-503, 2004. Pappas, P.A., Tzakis, A.G., Gaynor, J., Carreno, M., Ruiz P., Huijing, F., Kleiner, G., Rabier, D., Kato, T., Levi, D.M., Nishida, S., Gelman, B., Thompson, J.F., Mittal, N. and J-M Saudubray. An Analysis of the Association between Serum Citrulline and Acute Rejection among 26 Recipients of Intestinal Transplant. American Journal of Transplantation 4:1124-32, 2004. Tryphonopoulos, P., Tzakis, A., Weppler, D., Garcia-Morales, R., Kato, T., Madariaga, J.R., Levi, D., Nishida, S., Moon, J., Selvaggi, G., Regev, A., Nery, C., Bejarano, P., Khaled, A., Kleiner, G., Esquenazi, V., Miller, J., Ruiz, P. and C. Ricordi. The role of donor bone marrow infusions in withdrawal of immunosuppression in adult liver allotransplantation. American Journal of Transplantation, 5:608-613, 2005. Kato, T., Gaynor, J.J., Selvaggi, G., Mittal, N., Thompson, J., McLaughlin, G.E., Nishida, S., Moon, J., Levi, D., Madariaga, J., Ruiz, P. and A. Tzakis. Intestinal transplantation in children: a summary of clinical outcomes and prognostic factors in 108 patients from a single center. Journal of Gastrointestinal Surgery. 9(1):75-89, 2005. Tryphonopoulos, P., Madariaga, J.R., Kato, T., Nishida, S., Levi, D., Moon, J., Selvaggi, G., De Faria, W., Regev, A., Bejarano, P., Khaled, A., Safdar, K., Esquenazi, V., Weppler, D., Yoshida, H., Ruiz, P., Miller, J., and A. Tzakis. The impact of Campath-1H induction in adult liver allotransplantation. Transplantation Proceedings. 37(2):1203-4, 2005. Nakamura, N., Nishida, S., Vaidya, A., Levi, D., Kato, T., Madariaga, J., Neff, G., Ruiz, P. and A. Tzakis. Intrahepatic Biliary Strictures without Hepatic Artery Thrombosis Following Liver Transplantation: an analysis of 1113 liver transplantation at a single center. Transplantation 79:427-32, 2005. Kato, T., Yoshida, H., Sadfar, K., Martinez, E., Nishida, S., Moon, J., Madariaga, J., Selvaggi, G., Levi, D., Ruiz, P., Schiff, E. and A. Tzakis. Steroid-free induction and preemptive antiviral therapy for liver transplant recipients with hepatitis C: a preliminary report from a prospective randomized study. Transplantation Proceedings. 37(2):12179, 2005. Denkinger, C., Harigopal, P., Ruiz, P., Tzakis, A. and L. Dowdy. Cryptosporidium associated cholangitis in a liver transplant patient. Microbiology & Infection Supplement. 11 2:282:923, 2005. Tryphonopoulos, P., Weppler, D., Levi, DM., Nishida, S., Madariaga, JR., Kato, T., Mittal, N., Moon, J., Selvaggi, G., Esquenazi, V., Cantwell, P., Ruiz, P., Miller, J. and AG Tzakis. Transplantation for the treatment of intra-abdominal fibromatosis. Transplantation Proceedings. 37(2):1379-80, 2005. Tzakis, A., Kato, T., Levi, D., DeFaria, W., Selvaggi, G., Weppler, D., Nishida, S., Moon, J., Madariaga, J., David, a., Thompson, J., Hernandez, E., Martinez, E., Cantwell, P., Augenstein, J., Gyamfi, A., Pretto, E., Gaynor, J., Dowdy, L., Tryphonopoulos, P. and P. Ruiz. One hundred cases of multivisceral transplantation. Annals of Surgery, 242:480-493, 2005. Cendales, L., Kirk, A., Moresi, J.M., Ruiz, P. and D.E. Kleiner. Composite tissue allotransplantation: classification of clinical skin acute rejection. Transplantation 80:1676-1680, 2005. Yu, H.C., Tuteja, S., Moon, J., Kleiner, G., Conanan, L., Gaynor, J., Kato, T., Levi, D., Nishida, S., Selvaggi, G., Gandia, C., Weppler, D., Esquenazi, V., Ruiz, P., Miller, J. and A. Tzakis. Utilization of dried blood spot citrulline level as a noninvasive method for monitoring allograft function following intestinal transplantion. Transplantation 80:1729-1733, 2005 . Nishida, S., Gaynor, J., Nakamura, N., Butt, F., Illanes, H., Kadano, J., Neff, G., Levi, D., Moon, J., Selvaggi, G., Kato, T., Ruiz, Tzakis, A., and J. Madariaga. Refractory ascites after liver transplantation: an analysis of 1058 liver transplants at a single center. American Journal of Transplantation 6:140-149, 2006. Rosado, M., Byrne, G.E., Ding, F., Fields, K., Ruiz, P., Dubovy, S., Walker, G., Markoe, A. and I.S. Lossos. Ocular Adnexal Lymphoma: a Clinicopathological Study of a Large Cohort of Patients With no Evidence for an Association with Chlamydia psittaci. Blood 107:467-472, 2006. Rosenfeld, P.J., Murray, T.G., Viciana, A.L., Ruiz, P., Markoe, A. and S.R. Toledano. Diagnostic flow cytometry of vitreous and bone marrow biopsies in acute lymphoblastic leukemia. (submitted for publication). Snyder, J., Gilkeson, G.S., Pisetsky, D.S., Ruiz, P. and M. Kopke Wloch. Influence of background genes on the expression of pathogenic anti-DNA and glomerulonephritis in Faslpr mice. (submitted for publication). Nishida, S., Nakamura, N., Vaidya, A., Levi, D., Kato, T., Nery, J., Madariaga, J., Molina, E., Ruiz, P., Gyamfi, A. and A. Tzakis. Effect of routine use of the piggyback technique compared with the conventional technique in adult orthotopic liver transplantation: retrospective study of 1067 liver transplants at a single center. Accepted for publication. Neff, G.W., Reddy, K.R., Safdar, K., Ruiz, P., Bernstein, J., Tzakis, A.G. and E.R. Schiff. Fulminant hepatic failure due to ephedra (ma huang) ingestion for weight loss. Submitted for publication. Wasserberg, N., Pileggi, A., Salgar, S.K., De Faria, W., Ruiz, P., Ricordi, C., Inverardi, L. and A.G. Tzakis. Heme oxygenase-1 upregulation protects intestine from ischemia/reperfusion injury. Submitted for publication. Kato, T., Salveggi, G., Mittal, N., Nishida, S., Levi, D., Madariaga, J., Thompson, J., Ruiz, P. and A. Tzakis. Use of zoom video endoscopy in intestinal graft surveillance. Submitted for publication. Neff, G.W., Shire, N., Ruiz, P., O’Brien, C., Garcia, M., Montalbano, M., DelaGarza, J., Rudich, S.R. and R. Reddy. The importance of clinical parameters when differentiating cholestatic hepatitis C virus from allograft rejection. Submitted for publication. Pappas, P., Tzakis, A., Saudubray, J-M., Gaynor, J., Carreno, M., Huijing, F., Kleiner, G., Rabier, D., Kato, T., Levi, D., Nishida, S., Gelman, B., Thompson, J., Mittal, N. and P. Ruiz. Trends in serum citrulline and acute rejection among recipients of small bowel transplant. Submitted for publication. Sekine, H., Graham, K.L., Zhao, S., Elliot, M.K., Ruiz, P., Morel, L., Holers, M., Utz, P.J. and G. Gilkeson. Critical role for MHC-linked genes in immunoglobulin isotype and autoantigen selection in a murine model of SLE. Submitted for publication. Martinez, E., Ruiz, P., Tzakis, A. Reversible sclerosing cholangitis due to cryptosporidiosis in a liver transplant patient. Submitted for publication. Davis, J., Miller, D.M., and P. Ruiz. Diagnostic testing of vitrectomy specimens. Accepted for publication, American Journal of Opthalmology. Brickey, W.J., Griffiths, R., Felix, N., Ruiz, P., Coffman, T.M. and J.P. Ting. An alternate and vigorous CIITA-independent MHCII induction pathway in kidney allograft rejection. Submitted for publication. Tryphonopoulos, P., Weppler, D., Garcia-Morales, R., Kato, T., Madariaga, J.R., Levi, D., Nishida, S., Moon, J., Selvaggi, G., Regev, A., Nery, C., Bejarano, P., Khaled, A., Esquenazi, V., Miller, J., Ruiz, P., Ricordi, C. and A. Tzakis. Perioperative donor bone marrow infusions and weaning of immunosuppression in liver allograft recipients. Submitted for publication. Kato, T., Gaynor, J.J., Nishida, S., Mittal, N., Selvaggi, G., Kleiner, G., O’Brien, C., Thompson, J., Ruiz, P. And A. Tzakis. Zoom endoscopic monitoring of small bowel allograft rejection. Submitted for publication. Liu, J., Karypis, G., Hippen, K., Vegoe, A., Ruiz, P., Gilkeson, G. and T. Behrens. A genomic view of systemic autoimmunity in MRL lpr/lpr mice reveals a central role for the interferon pathway. Submitted for publication. Gaynor, J.J., Kato, T., Selvaggi, G., Moon, J.I., Levi, D., Nishida, S., Weppler, D., Ruiz, P. and A. Tzakis. The importance of analyzing graft and patient survival by cause of failure in pediatric small intestine transplantation. Submitted for publication. Crowley, S., Vasievich, M., Ruiz, P., Pazmino, K., Tran, T., Pisetsky, D., Foster, M. and T.M. Coffman. Anti-inflammatory effects of AT1 receptors in MRL/lpr mice. Submitted for publication. Banff Working Group. Liver Biopsy Interpretation for Causes of Late Liver Allograft Dysfunction. Submitted for publication. Sarkar, S., Selvaggi, G., Mittal, N., Acar, B.C., Weppler, D., Kato, T., Tzakis, A. and P. Ruiz. Gastrointestinal tract ulcers in pediatric intestinal transplantation patients: etiology and management. Accepted for publication. Garcia, M., Bejarano, P.A., Rodriguez, M., Ruiz, P. and A.G. Tzakis. Idiopathic lafora body like inclusions in transplanted patients. The differential diagnosis of ground-glass hepatocytes. Submitted for publication. Kato, T., Tzakis, A.G., Selvaggi, G., Gaynor, J., David, A., Bussotti, A., Moon, J., Ueno, O., DeFaria, W., Santiago, S., Levi, D., Nishida, S., Gonzalez, M., McLaughlin, G., Hernandez, E., Thompson, J., Cantwell, P., Halliday, N.,MD; Livingstone, A., and P. Ruiz. Intestinal transplantation in children. Submitted for publication. Ciancio, G., Burke, G.W., Gaynor, J., Ruiz, P., Roth, D., Kupin, W., Rosen, A. and J. Miller. A randomized long-term trial of tacrolimus/sirolimus versus tacrolimus/mycophenolate versus cyclosporine (neoral®)/sirolimus in renal transplantation: three year analysis. Submitted for publication. Crowley, S., Gurley, S., Herrera, M., Ruiz, P., Griffiths, R., Kumar, A., Kim, H-S., Smithies, O., Le, T. and T.M.Coffman. Hypertension and Cardiac Hypertrophy Are Mediated by Angiotensin Receptors in the Kidney. Submitted for publication. Cheng, O., Ruiz, P., Zhang, X., Yeun, P., Grotendorst, G. And R.B. Mannon. Connective Tissue Growth Factor (CTGF) is associated with chronic allograft nephropathy. Submitted for publication.