CURRICULUM VITAE
KENNETH H. NEALSON – WRIGLEY PROFESSOR OF GEOBIOLOGY, USC
PERSONAL:
Work:
Home:
University of Southern California
Dept. of Earth Sciences,
117 Zumberge Halll of Science
3651 Trousdale Parkway
Los Angeles, CA 90089-0740
phone: 213-821-2271
651 Andalusia Ave
Los Angeles, CA 90065
phone: 323-227-6018
email: knealson@usc.edu
EDUCATION:
B.S. Biochemistry, University of Chicago, 1965
Ph.D. Microbiology, University of Chicago, 1969
Thesis Topic: Biochemical Genetics of Luminous Bacteria
Thesis Advisor: Prof. Alvin Markovitz
Postdoctoral Study, Harvard University, 1969-1972; Laboratory of Prof. J.W. Hastings
EMPLOYMENT:
Univ. Cal. San Diego, Scripps Institution of Oceanography, Assistant Professor, 1973-1978
Associate Professor, 1978-1984, Full Professor, 1984-1985
Univ. Wisconsin-Milwaukee, Center for Great Lakes Studies, Distinguished Professor, 1985-1997
Jet Propulsion Laboratory -- Senior Scientist; and Caltech -- Faculty Associate 1/98 – 9/01
Univ. of Southern California – Wrigley Professor of Geobiology – 10/01 – present
HONORS & AWARDS:
Hutchinson Fellowship for Graduate Studies in Botany, 1966
NSF Pre Doctoral Trainee, Univ. of Chicago, 1966-1969
NSF Post Doctoral Fellowship, 1969-1970
NIH Post Doctoral Fellowship, 1970-1972
Guggenheim Fellowship for Sabbatical Leave, 1981
Distinguished Visiting Professor, Univ. Wash., Summer, 1981
Elected Fellow, American Academy of Microbiology, Nov. 1993
NRL Distinguished Visiting Researcher Award, Jan., 1996
Nat. Acad. Sciences: Distinguished Leader in Life Sciences Award, October, 1998
Amer. Soc. Microbiology: Divisional Lecture Award, May, 1999
Amer. Soc. Microbiology: Divisional Lecture Award, May, 2000
NASA Special leadership award: JPL ($2,500 prize), June, 2000
Carnegie Institution Fellow – Cecil and Ida Green Fellow, December, 2000 (5 year award)
Chair, Gordon Research Conference: Origin and Evoution of Life, Jan. 2001
Burroughs Wellcome Visiting Prof. in Microbiol. – Distinguished Lecture (Univ. Mo.), May, 2001
Society for Industrial Microbiol. – MDS Fermentation Technology Award – October, 2002
Amer. Soc. Microbiology. – Proctor and Gamble Award for Excellence in Environmental Microbiology
Award Presented at ASM Meeting, Wash. D.C., May 2003.
Society for Industrial Microbiol – Waksman Outstanding Educator Award, October, 2004
Recipient of the D.C. White Award for Research and Mentoring, Amer. Soc. Microbiol., 2009
Award to be presented at ASM meeting, San Diego, June 2010
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PROFESSIONAL SOCIETIES:
American Society for Microbiology
Society for General Microbiology
American Association for Advancement of Science
American Society for Limnology and Oceanography
American Geophysical Union
Society of Photochemistry and Photobiology
The Oceanography Society
American Society for Molecular Marine Biology and Biotechnology
Geological Society of America
International Society for Microbial Ecology
NATIONAL AND INTERNATIONAL SERVICES:
Grant Review Panels:
National Science Foundation
Biological Oceanography
Environmental Protection Agency
Basic Research Panel
NASA
Planetary Biology and Chemical Evolution Panel
Exobiology Panel
DOE
Chairman, Subsurface Microbiology Panel
Editor: Applied and Environmental Microbiology
Member of Editorial Board of Journals:
Geobiology Journal
Environmental Microbiology
FEMS Microbial Ecology
Geomicrobiology Journal
Symbiosis
Outside Reviewer of Journals:
Journal of Bacteriology, Science, Nature
Biological Bulletin, Biochemistry, Journal of Biological Chemistry
Limnology and Oceanography, Journal of Great Lakes Research
Chairman, Nat. Acad. Sciences Task Group on Planetary Protection, 1993
Produced NAS Document for Public Distribution entitled: "Biological Contamination of Mars"
Member Scientific International Advisory Board: Japanese Marine Biotechnology Institutes (MBI)
Chairman, Nat. Acad. Sciences Task Group on Issues in Sample Return, 1996
Produced NAS Document for Public Distribution entitled: “Issues in Sample Return”
Appointed Member, Space Studies Board of the National Academy of Sciences, USA 1996-98
Member, Space Science Exploration Subcommittee (Congressional Committee) 1996-99
Co-Chair, NAS Committee on Origin and Evolution of Life (COEL) 2005 - 2008
Member, Scientific Board, Venter Institute -- 2005 – 2008
Member, Space Studies Board of NRC – 2006 – 2008
Member, Mars Exploration Science Working Group, NASA 1998-present
Member, Science Advisory Board, Max Planck Inst. Marine Microbiology, Bremen, Germany
Member, Science Advisory Board, Synthetic Genomics, Inc., La Jolla, CA
Member, Board of Trustees, J. Craig Venter Institute, San Diego, CA
Member, Science Advisory Board, Japanese Marine Science & Technology (JAMSTEC)
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AREAS OF RESEARCH:
Biogeochemistry of Manganese and Iron: For several years we have been studying the laboratory and
field activities of bacteria that oxidize and reduce metals, primarily manganese and iron. Past studies involved the
development of methods to measure metal oxidation rates in the field, and the characterization of Mn and Fe
oxidizing bacteria from a variety of marine and freshwater environments.
Recent studies have involved the development of methods to measure the reduction of Mn and iron oxides
by bacteria, and the relationship of these processes to other anaerobic processes in sediments. During this work,
we described for the first time bacteria that grow anaerobically by coupling the oxidation of carbon to the
reduction of iron and manganese oxides. These bacteria represent a new and novel metabolic group, which have
been shown to couple their metabolism of metals to the extrusion of protons. They will be a major focal point of
study for the near future.
Present work with these organisms involves the molecular studies of their metal metabolism, and the
relationship of this metabolism to other metabolic pathways within the metal reducing bacterium Shewanella
putrefaciens. The studies range all the way from ecological studies of the distribution and activity of S.
putrefaciens, to biochemical studies of the enzymes involved in reductive processes, to comparative gene studies
of reductases involved in anaerobic metabolism.
Development of Methods for Life Detection: During my time at JPL, I directed a group in the general
area of Astrobiology. This group was composed of about 20 people, and had as its goal the development of
search strategies for life detection, the development and testing of technologies to test these strategies in the
laboratory or at other laboratories where the technologies exist, and eventually the use of these approaches and
techniques for the search for life, both on Earth, in samples returned to Earth, and in situ on Mars and other sites
off of our planet. This group and the work was decidedly interdisciplinary, including chemists, physicists,
mathematicians, and engineers, as well as biologists, and involved a strong connection with national labs, such as
the synchrotron facilities at Argonne and Berkeley, and with the group at Oak Ridge.
Extreme environments on Earth: Recently, our laboratory has begun the investigation of extreme
environments on Earth, utilizing the methods that we have been developing for life detection. These include the
investigation of Mono Lake, CA. (high pH and salinity), deep subsurface environments (deep sea drilling cores),
cold environments like the Antarctic and Siberian permafrost, and deserts, both hot and cold. One site of great
interest is that of the Cedars in northern California, a site at which the pH reaches 12 and above, and the Eh is
routinely minus 500 mV and lower.
Geology of Mars, and the possibility of past or present life on Mars: I am presently involved with the
Odyssey Mission to Mars, being a PI of the Themis imaging team. This work involves several students and postdocs in the lab, and focuses on the search for water and specific mineral types on the surface of Mars. It focuses
on the properties of Mars that might be consistent with them being habitats for past life, and thus good sites to
look for the evidence of past or even extant life when future Mars missions are flown.
Microbial Fuel Cells for energy and education: Our lab has been working on the development and
testing of microbial fuel cells (MFCs), with three goals in mind. First, to utilize these systems as teaching tools
for microbial physiology and ecology; second, to improve power consumption to the point that useful power can
be gained from the conversion of organic biomass; and, third, to engineer the systems for the processing of
municipal and industrial waste. The latter would have the goal of both supplying energy and reducing the amount
of sludge output from waste treatment plants via more efficient cycling of the waste during MFC operation.
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MAJOR RESEARCH ACCOMPLISHMENTS:
I list below what I feel are the major accomplishments of my own research, and that of my students and
postdocs while working with me. The papers leading to these accomplishments are indicated in the
publications list by being in bold.
1. Quorum Sensing (1970s)
My thesis work, postdoctoral work, and early professorial research (at Scripps Institution of
Oceanography) involved the biochemistry and physiology of light emitting bacteria. During these studies I
discovered a mechanism the bacteria used to control their light emission that I called autoinduction. We purified
the “autoinducer” (a homoserine lactone), and showed that it was used by the bacteria to communicate with each
other in a process that was later renamed “quorum sensing”. This mechanism is now recognized as a major
mechanism involved with microbial ecology, especially as regards biofilm formation, and pathogenesis.
2. Cloning of genes from marine bacteria (1980s)
During the work with luminous bacteria, we successfully cloned the genes for bacterial luciferase. This
was the first successful attempt at cloning and expressing genes from marine bacteria. During this work, we also
cloned the genes for autoinduction (quorum sensing) discussed above.
3. Deployment of microelectrodes in the deep sea to measure oxygen flux (1980s)
Claire Reimers, a postdoc in my lab, developed microelectrode methods, and worked to miniaturize the
electronics, ultimately resulting in the measurement (for the first time) of oxygen profiles in deep sea sediments,
and opening up an area of marine Geobiology formerly impossible.
4. Isolation of bacteria capable of manganese (and iron) reduction (1980s)
In studies of the metal cycling of Oneida Lake, NY, while at the University of Wisconsin’s Center for
Great Lakes Studies, we isolated, for the first time, an organism capable of “solid state respiration”, in which solid
metal oxides of iron and/or manganese could be used for respiration (as electron acceptors). These bacteria, in the
group Shewanella have been a model organism for the study of extracellular electron transport by bacteria.
5. Cloning of the first “environmental bacterium” (1990s)
Shewanella oneidensis MR-1 was the first environmental bacterium (i.e., not a medical isolate) that was
cloned, opening up a vast change in the way bacteria could be studied in the laboratory.
6. Metagenomics of the Marine Environment (2000s)
Working with scientists from the Venter Institute, we succeeded, for the first time, in metagenomics
analysis of the ocean. This work focused on the Sargasso Sea, and resulted in the first look at what turned out to
be a surprisingly diverse and complex community. This was followed by a far more complex, large study, of the
North Atlantic to the mid-Pacific, revealing a surprising and huge diversity not previously appreciated (or
expected).
7. Identification of genes involved with electricity production in microbial fuel cells (MFC)
Work at USC has revealed a number of genes from Shewanella that are essential for current production in
MFC systems, and opened the door to the possibility of producing bacteria capable of producing electricity from
domestic, industrial, and agricultural waste, while simultaneously producing clean water. This work is recently
published, and in progress, and a major part of the laboratory’s focus at the present time.
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RESEARCH FUNDING
I have been continuously funded in the areas described above for about 30 years, and details of current
funding are available on request. For the past 20 years, funding has been at a level of about $1M per year.
A general summary is given below, with the amounts to my lab given in rough amounts.
Extracellular electron electron transport:
Uranium bioremediation -- ~ 100 K/year
Microbial physiology/genetics -- ~ 300 K/year
Chromium bioremediation -- ~ 125/year
DOE
DOE
NSF
Microbial Fuel Cell:
Mechanisms of current production – 300K/year
Optimizing current production – 250 K/year
AFOSR (Air Force)
Private Funds
Planetary Science:
Survival of extremophiles -- ~ 100K/year
NASA
I currently am director of a MURI (Multidisciplinary University Research Initiative) for MFC work,
that includes 5 other PIs, and totals ~ 1.25 million per year.
INVITED LECTURES AND SYMPOSIA:
I don’t keep records of seminars and symposia at which I speak, as I tend to do this a couple of
times a month, and consider it part of my regular job.
I give 10 – 15 departmental seminars each year, and 2-5 Plenary Talks at national and international
meetings. In addition I have presented more than 20 talks at Gordon Research Conferences, and have been
Chair or Co-Chair at several Gordon Conferences, including: Environmental Science (water); Origin of
Life; and Applied and Environmental Microbiology.
Last year I gave a Plenary Lecture at a Max Planck workshop on life in the deep subsurface in
Bremen, Germany, and a Plenary Lecture at the International Society for Environmental Microbiology
(ISME), in Cairns, Australia.
This year I will give the opening lecture at the AEM Gordon Conference; a Plenary Lecture at the
American Society for Microbiology meeting in Philadelphia, and a Plenary Lecture at the Goldschmidt
Conference in Davos, Switzerland.
TEACHING:
Over the years I have presented courses at USC to both upper level UG and Graduate students: 1)
Microbial diversity; 2) Microbes and Minerals; 3) Habitable Planets; 4) Geobiology of Modern and Ancient
Sediments; 5) The Living Planet (Geobiology). Currently I teach: Evolution and Adaptation of Bacteria;
and, 2) Geobiology and Astrobiology.
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STUDENTS TRAINED IN MY LABORATORY:
Below is a list of students whose committees I was chairman or co-chairman, or with whom I
interacted in a significant way during their training.
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Dr. David Karl, Prof., Oceanography, Univ. Hawaii
Dr. Robert Hodson, Prof., Microbiology, Univ. Georgia
Dr. E.G. Ruby, Assoc. Prof., Biology, Univ. S. California
Dr. Francisco Vidal, Res. Prof., UNAM, Mexico City
Dr. Margo Haygood, Asst. Prof., Scripps Inst. Oceanogr., UCSD
Dr. Bradley Tebo, Asst. Prof., Scripps Inst. Oceanogr., UCSD
Dr. Sarah French, Assoc. Res. Prof., Molec. Biol., Univ. Va
Dr. Dan Cohn, Assoc. Prof., Dept. of Medicine, UCLA
Dr. David Burdige, Assoc. Prof. Oceanography, Old Dominion Univ.
Dr. Gary Leisman, Senior Researcher, Post-Doc., NC State Univ.
Dr. Paul Dunlap, Assoc. Professor, University of Michigan
Dr. Carmen Aguilar, Postdoctoral Fellow, Research Scientist, Univ. Wisconsin
Dr. Birgit Krause, Postdoctoral Fellow, Swiss Water Institute
Dr. Duane Moser, Asst. Prof., UNLV, Desert Research Institute
Dr. James Scott, 2002. Asst. Prof. Dartmouth Univ.
Mr. Jerry Liu, 2002. Biotech Industry Consultant
Mr. Derek Shannon, MS degree in 2007.
Ms. Rachel Schelble, Ph.D. degree in 2007; Scientist, Exxon Mobile
Ms. Brenda Fouch, MS degree in 2008
Dr. Orianna Bretschger, Ph.D. degree in 2008, Postdoc J.Craig Venter Inst.
Dr. John McCrow, Ph.D. degree in 2008, Postdoc at J. Craig Venter Inst.
Dr. Everett Salas, Ph.D. degree in 2009, Postdoc, Rice Univ.
Dr. Laurie Barge, Ph.D. degree in 2009, Postdoc, Caltech
Dr. Michael Waters, Ph.D degree in 2009, Postdoc, NIST
Ms. Yanbing Wang, current, Ph.D. degree expected fall 2010
Ms. Beverly Flood, current, Ph.D. degree expected fall 2010
Mr. Lewis Hsu, current, Ph.D. degree expected fall 2010
Mr. Prithviraj Chulamurthy, current 3rd year: quals passed
Ms. Carie Frantz, current, current 2nd year: quals passed
Mr. Howard Harris, current, current 2nd year
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POST DOCTORAL WORKERS IN MY LABORATORY:
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Dr. Yehuda Cohen, 1970, Prof. Hebrew Univ.
Dr. Reinhardt Rosson, 1975-77, Senior Researcher, Biotechnical Resources, Inc.
Dr. Paul Kepkay, 1983-4, Prof., Dalhousie Univ..
Dr. Claire Reimers, 1982-84, Prof., Oregon State Univ. .
Dr. Sally Look, 1984-85, Researcher, NIH
Dr. Thomas Schmidt, 1985-87, Prof., Michigan State Univ.
Dr. Bruce Bleakley, 1985-87, . Prof., So. Dak. State Univ.
Dr. Charles Myers, 1987-89, Assoc. Prof., Medical College of Wisconsin.
Dr. Susan Frackman, 1989-1992, Research Specialist, Pharmacia, Inc.
Dr. David Bermudes, 1989-1992, Industry – own company
Dr. Daad Saffarini, 1991-1995, Assoc. Prof., Univ. of Wisconsin-Milwaukee
Dr. Joel Kostka, 1993 - 1995, Asst. Prof., Univ. Georgia
Dr. Lea Cox, 1997-2000, Asst. Prof. Res., UCSB
Dr. Henry Sun, 1998-2000, Asst. Prof. Res., DRI
Dr. Brian Lanoil, 1998-2001, Asst. prof. Environmental Sciences, UC-Irvine
Dr. Lisa Stein, 1999-2001, Asst. Prof. Environmental Chemistry, UC-Irvine
Dr. Robert Rye, 2000-2001, Asst. Prof. Research, USC
Dr. Eric Gaidos, 1998-2001, Assoc. Professor at Univ. Hawaii
Dr. Corien Bakermans, 2000-, Post Doc, Mich. State Univ.
Dr. Giovanna Tinetti, 2001 – present, Univ. of Torino, Italy
Dr. Virginia Souza, 2001 – Asst. Prof, Univ. of Madrid, Spain
Dr. Radu Popa, 2000 – Asst. Prof., Portland State Univ.
Dr. Patrick Meister, present, from ETH in Switzerland
Dr. Moh El-Naggar, 2007-2009, Asst. Prof. Physics, USC
Dr. Zhen (Jason) He, 2008-2009, Asst. Prof. Engineering, U.W. Milwaukee
Dr. Jae-Kyung Kang, scientist, Korean Inst. Sci. & Technology (KIST)
Dr. Jinjun Kan, present, from Ctr. Marine Biotechnology, Maryland, USA
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PUBLICATIONS:
I have published ~300 reviewed papers, three edited books, and several reports from summer courses and
other workshops as shown below
Published Monographs and Reports:
Margulis, L., K. Nealson, and I. Taylor. 1983. Biogeochemistry of Carbon and Early Life. NASA Tech. Memo.
86043. Report of the PBME Summer Research Program. NASA Press 134 pp.
Nealson, K., L. Margulis, and D. Sagan. 1985. The Global Sulfur Cycle. NASA Tech. Memo. 87570. Report of
the PBME Summer Research Program. NASA Press, 262 pp.
Nealson, K., M. Nealson, and F.R. Dutcher. 1990. The Biogeochemistry of Metal Cycling. NASA Tech. Memo.
4295. Report of the PBME Summer Research Program. NASA Press , 206 pp.
Nealson, K.H. (Chair, Task Group on Planetary Protection). 1992. Biological Contamination of MARS, Issues
and Recommendations. Report of the Task Group on Planetary Protection of the Space Studies Board. Natl.
Academy Press, Washington, D.C. 115 pp.
Nealson, M.S., and K. Nealson. 1993. Molecular Ecology and the Global Nitrogen Cycle. NASA Tech. Memo
4497. Report of the PBME Summer Research Program. NASA Press, 170 pp.
Nealson, K.H. (Chair, Task Group on Sample Return). 1997. Issues in Sample Return. Report of the Task Group
on Issues in Sample Return of the Space Studies Board. Natl. Academy Press, Washington D.C.
Books:
Nealson, K.H. (editor). 1981. Bioluminescence: current perspectives. Burgess Publishing Company,
Minneapolis, MN.
Banfield, J. F. and K.H. Nealson (editors). 1997. Geomicrobiology: interactions between microbes and minerals.
Reviews in Mineralogy Volume 35. Mineral. Soc. America, Washington, D.C.
Banfield, J.F., Cervini-Silva, J., and K.H. Nealson. 2005. Molecular Geomicrobiology. Rev. Mineralogy. Vol. 59.
Mineral. Soc. America. Washington, DC
Reviewed Papers and Chapters:
1. Nealson, K., and A. Markovitz. 1970. Mutant analysis and enzyme subunit complementation in bacterial
bioluminescence in Photobacterium fischeri. J. Bacteriol. 104:300-312.
2. Nealson, K., T. Platt, and J.W. Hastings. 1970. Cellular control of the synthesis and activity of the bacterial
luminescent system. J. Bacteriol. 104:313-322.
3. Gunsalus-Miguel, A., E. Meighen, M. Nicoli, K. Nealson, and J.W. Hastings. 1972. Purification and properties
of bacterial luciferase. J. Biol. Chem. 247:398-404.
4. Nealson, K., and J.W. Hastings. 1972. The inhibition of bacterial luciferase by mixed function oxidase
inhibitors. J. Biol. Chem. 247:888-894.
5. Nealson, K., A. Eberhard, and J.W. Hastings. 1972. Catabolite repression of bacterial bioluminescence:
functional implications. Proc. Natl. Acad. Sci. USA 59:1073-1076.
6. Hastings, J.W., A. Eberhard, T. Baldwin, M. Nicoli, T. Cline, and K. Nealson. 1973. Bacterial bioluminescence:
Mechanistic implications of active site chemistry of luciferase. pp. 369-380. In: Chemiluminescence and
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Bioluminescence. Ed. M. Cormier, D. Hercules, and J. Lee. Plenum Pub. Co., NY.
7. Keynan, A., K. Nealson, H. Sideropoulos, and J.W. Hastings. 1974. Marine transducing bacteriophage
attacking a luminous bacterium. J. Virology. 14:74-86.
8. Morin, J., A. Harrington, K. Nealson, N. Krieger, T. Baldwin, and J.W. Hastings. 1975. A light for all reasons.
Science 190:74-76.
9. Ruby, E.G., and K.H. Nealson. 1976. Symbiotic association of Photobacterium fischeri with the luminous fish
Monocentris japonica: a model of symbiosis based on bacterial studies. Biol. Bull.
10. Nealson, K. H., and J.W. Hastings. 1977. Low oxygen is optimal for luciferase synthesis in some bacteria:
Ecological implications. Arch. Microbiol. 112:9-16.
11. Nealson, K.H. 1977. Autoinduction of bacterial luciferase: Occurrence, mechanism and significance. Arch.
Microbiol. 112:73-79.
12. Reichelt, J., K. Nealson, and J. Hastings. 1977. The specificity of symbiosis: Pony fish and luminescent
bacteria. Arch. Microbiol. 112:157-161.
13. Ruby, E.G., and K.H. Nealson. 1977. A luminous bacterium that emits yellow light. Science
14. Ruby, E.G., and K.H. Nealson. 1977. Pyruvate production and excretion by luminous marine bacteria. Appl.
Environ. Microbiol. 34:164-169.
15. Hastings, J.W., and K.H. Nealson. 1977. Bacterial bioluminescence. Ann. Rev. Microbiol.
16. Nealson, K.H. 1978. The isolation and characterization of marine bacteria that catalyze manganese oxidation.
Environ. Biogeochem. Geomicrobiol. 3:847-858.
17. Ruby, E.G., and K.H. Nealson. 1978. Seasonal changes in the species composition of luminous bacteria in
nearshore seawater. Limnol. Oceanogr.. 23:530-533.
18. Nealson, K. H., 1978. Isolation, identif ication and manipulation of luminous bacteria. pp. 153-156. In:
Methods in Enzymology, vol. 57. Ed. M. DeLuca. Academic Press, NY.
19. Gagosian, R., S. Ahmed, J. Farrington, R. Lee, R. Mantoura, K. Nealson, T. Packard, and K. Reinhart. 1978.
Future research problems in marine organic chemistry. Mar. Chem. 6:375-383.
20. Bang, S., P. Baumann, and K. Nealson. 1978. Phenotypic characterization of Photobacterium logei (sp. nov.),
a species related to Photobacterium fischeri. Current Microbiol. 1:285-288.
21. Holland, N., and K. Nealson. 1978. The fine structure of the echinoderm cuticle and the subcuticular bacteria
of echinoderms. Acta. Zool. (Stockholm) 59:169-185.
22. Nealson, K.H. 1979. Alternative strategies of symbiosis of marine luminous fishes harboring light emitting
bacteria. T. I. B. S. 4:105-110.
23. Tebo, B.M., D. Linthicum, and K. Nealson. 1979. Luminous bacteria and light emitting fish: Ultrastructure of
the symbiosis. BioSystems 11:269-280.
24. Nealson, K., and J.W. Hastings. 1979. Bacterial bioluminescence: Its control and ecological significance.
Microbiol. Rev. 43:469-518.
25. Poinar, G., G. Thomas, M. Haygood, and K. Nealson. 1980. Growth and luminescence of the symbiotic
bacteria associated with the terrestrial nematode Heterorhabditis bacteriophora. Soil. Biol. Biochem. 12:5-10.
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26. Nealson, K.H., and J. Ford. 1980. Surface enhancement of bacterial manganese oxidation: Implications for
aquatic environments. Geomicrobiol. J. 2:21-37.
27. Karl, D.M., and K. Nealson. 1980. Regulation of cellular metabolism during synthesis and expression of the
luminous system in Beneckea and Photobacterium. J. Gen. Microbiol. 11 7:357-368.
28. Leisman, G., D. Cohn, and K. Nealson. 1980. Bacterial origin of luminescence in marine animals. Science
208:1271-1273.
29. Nealson, K.H., and B. Tebo. 1980. Structural features of manganese precipitating bacteria. Origins of Life
10:117-126.
30. Harwood, C., S. Bang, P. Baumann, and K. Nealson. 1980. Photobacterium logei sp. nov., nom. rev.;
Beneckea nereida sp. nov. nom. rev.; and Beneckea gazogenes sp. nov., nom. rev. Int. J. Syst. Bacteriol.
30:655-661.
31. Hastings, J.W., and K. Nealson. 1980. Exosymbiotic luminous bacteria occurring in luminous organs of higher
animals. pp. 467-471. In: Endocytobiology. Ed. W. Schwemmler and H. Schenk. Walter de Gruyter and Co.
NY.
32. Nealson, K., and J. Hastings. 1980. Luminescent bacterial endosymbionts in bioluminescent tunicates. pp.
461-465. In: Endocytobiology. Ed. W. Schwemmler and H. Schenk. Walter de Gruyter and Co. NY.
33. Jensen, M., B. Tebo, P. Baumann, M. Mandel, and K. Nealson. 1980. Characterization of Alteromonas
hanadai (sp. nov.), a nonfermentative luminous species of marine origin. Current Microbiol. 3:311-315.
34. Hastings, J.W. and K. Nealson. 1981. The symbiotic luminous bacteria. pp. 1332-1346. In: The Prokarvotes
Vol. 11. Ed. M. Starr, H. Stolp, H. Trueper, A. Balows, and H. Schlegel. Springer Verlag, NY.
35. Paul, V., S. Frautschy, W. Fenical, and K. Nealson. 1981. Antibiotics in microbial ecology: Isolation and
structure assignment of several new antibacterial compounds from the insect symbiotic bacteria Xenorhabdus
spp. J. Chem. Ecol. 3:589-597.
36. Burnette, B., and K. Nealson. 1981. Organic films and microorganisms associated with manganese nodules.
Deep Sea Res. 282:299-304.
37. Dean, W., W. Moore, and K. Nealson. 1981. Manganese cycles and the origin of manganese nodules, Oneida
Lake, NY, USA. Chem. Geol. 34:53-64.
38. Rosson, R., and K. Nealson. 1981. Autoinduction of bacterial bioluminescence in a carbon limited chemostat.
Arch. Microbiol. 129:299-304.
39. Eberhard, A., C. Eberhard, and K. Nealson. 1981. Purification, identification and synthesis of Photobacterium
fischeri autoinducer. pp. 113-120. In: Bioluminescence and Chemiluminescence. Ed. M. DeLuca and W.
McElroy. Academic Press, NY.
40. Eberhard, A., A. Burlingame, C. Eberhard, G. Kenyon, K. Nealson, and N. Oppenheimer. 1981. Structural
identification of autoinducer of Photobacterium fischeri luciferase. Biochemistry 20:2444-2449.
41. Nealson, K., D. Cohn, G. Leisman, and B. Tebo. 1981. Coevolution of luminous bacteria and their eukaryotic
hosts. Ann. N.Y. Acad. Sci. 361:76-91.
42. Nealson, K.H. 1982. Microbiological oxidation and reduction of iron. pp. 51-66. In: Mineral Deposits and the
Evolution of the Biosphere. Ed. H. Holland and M. Schidlowski. Dahlem Konferenzen, Berlin. Springer-Verlag,
NY.
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43. Rosson, R., and K. Nealson. 1982. Manganese binding and oxidation by spores of a marine Bacillus. J.
Bacteriol. 151:1027-1034.
44. Kepkay, P., and K. Nealson. 1982. Surface enhancement of sporulation and manganese oxidation by a
marine Bacillus. J. Bacteriol. 151:1022-1036.
45. Emerson, S., L. Jacobs, S. Kalhorn, R. Rosson, B. Tebo and K. Nealson. 1982. Environmental oxidation rate
of manganese: Bacterial catalysis. Geochim. Cosmochim. Acta 46:1073-1079.
46. Rosson, R. and K. Nealson. 1982. Manganese bacteria and the marine manganese cycle. pp. 201-216. In:
The Environment of the Deep Sea. Rubey symposium 11. Ed. J. Morin and W. Ernst. Prentice-Hall,
Englewood Cliffs, NJ.
47. Nealson, K.H. 1982. Bacterial ecology of the deep sea. pp. 179-200. In: The Environment of the Deep Sea.
Rubey Symposium 11. Ed. J. Morin and W. Ernst. Prentice-Hall, Englewood Cliffs, NJ.
48. Leisman, G., and K. Nealson. 1982. Characterization of a yellow fluorescent protein from Vibrio fischeri. pp383-386. In: Flavins and Flavoproteins. Ed: V. Massey and C. Williams. Elsevier North Holland.
49. Chapnick, S., W. Moore and K. Nealson. 1982. Manganese oxidation in a fresh water lake: Geochemical and
microbiological studies. Limnol. Oceanogr. 17:1004-1014.
50. Leisman, G., and K. Nealson. 1982. Yellow luminescence in vivo from the luminous bacteria Vibrio fischeri Y1. pp. 302-313. In: Bioluminescence in the Pacific. Ed. J. Gitelson and J. Hastings. lnst. Physics and
Biophysics, Krasnoyarsk, USSR.
51. Cohn, D., R. Ogden, J. Abelson, T. Baldwin, K. Nealson, M. Simon, and A. Mileham. 1983. Cloning of the
Vibrio harveyi luciferase genes: Use of a synthetic oligonucleotide probe. Proc. Nat. Acad. Sci USA 80:120123.
52. Nealson, K.H. 1983. Microbial oxidation and reduction of manganese and iron. pp. 459-479. In:
Biomineralization and Biological Metal Accumulation. Ed: P. Westbroek and E. deJong. D. Reidel Pub. Co.,
Amsterdam.
53. Burdige, D., P. Kepkay and K. Nealson. 1983. An in situ method for determining microbial manganese
oxidation rates in sediments. pp. 481-487. In: Biomineralization and Biological Metal Accumulation. Ed: P.
Westbroek and E. deJong. D. Reidel Pub. Co., Amsterdam.
54. Engebrecht, J., K. Nealson and M. Silverman. 1983. Bacterial bioluminescence: Isolation and genetic analysis
of functions from Vibrio fischeri. Cell 32:773-781.
55. Nealson, K.H. 1983. The microbial iron cycle. pp. 159-189. In: Microbial Geochemistry. Ed. W. Krumbein.
Blackwell Sci. Pub. Ltd., Oxford, U.K.
56. Nealson, K.H. 1983. The microbial manganese cycle. pp. 191-222. ln: Microbial Geochemistry. Ed. W.
Krumbein. Blackwell Sci. Pub. Ltd. Oxford, U.K.
57. Lidstrom, M., J. Engebrecht and K. Nealson. 1983. Evidence for plasmid-encoded manganese oxidation in a
marine pseudomonad. FEMS Microbiol. Lett. 19:1-6.
58. Burnett, B., and K. Nealson. 1983. Energy dispersive X-ray analysis of the surface of a deep sea
ferromanganese nodule. Mar. Geol. 53:313-329.
59. Haygood, M., B. Tebo, and K. Nealson. 1984. Luminous bacteria of a monocentrid fish (Monocentris
japonicus) and two anomalopid fishes (Photoblepharon palpebratus and Kryptophanaron alfredi): population
11
sizes and growth within the light organs, and rates of release into the seawater. Mar. Biol. 75:249-255.
60. Nealson, K., M. Haygood, B. Tebo, M. Roman, E. Miller, and J. McCosker. 1984. Contribution by symbiotically
luminous fishes to the occurrence and bioluminescence of luminous bacteria in seawater. Microbial Ecol.
10:69-77.
61. Warner, J., A. Arneson, R. Austin, D. Bailey, G. Huszar, P. James, R. McConnaughey, K. Nealson, and E.
Stephan. 1984. Scripps Canyon sea structure: A design and deployment for the study of oceanic
bioluminescence. Mar. Tech. Soc. J. 17:40-47.
62. Kepkay, P., D. Burdige and K. Nealson. 1984. Kinetics of bacterial manganese binding and oxidation in the
chemostat. Geomicrobiol. J. 3:245-262.
63. Rosson, R., B. Tebo and K. Nealson. 1984. Use of poisons in determination of microbial manganese binding
rates in seawater. Appl. Environ. Microbiol. 47:740-745.
64. Nealson, K., and R. Cassin. 1984. Molecular genetic studies in bioluminescence. pp. 87-99. In:
Bioluminescence and Chemiluminescence. Ed. S. Whitehead and L. Kricka. Academic Press, NY.
65. Haygood, M., and K. Nealson. 1984. Effects of iron on bacterial growth and bioluminescence: Ecological
implications. pp. 56-61. In: Current Perspectives in Microbial Ecology. Ed. M. Klug and C. Reddy. Amer. Soc.
Microbiol., Wash. D.C.
66. Reimers, C., S. Kalhorn, S. Emerson and K. Nealson. 1984. Oxygen consumption rates in pelagic sediments
from the Central Pacific: First estimates from microelectrode profiles. Geochim. Cosmochim. Acta 48:903-91
0.
67. Nealson, K., A. Arneson and A. Bratkovich. 1984. Preliminary results from studies of nocturnal
bioluminescence with subsurface moored photometers. Mar. Biol. 75:185-191.
68. Orzech, J., and K. Nealson. 1984. Bioluminescence of marine snow: its effect on the optical properties of the
sea. Proc. Internat. Soc. Optical Eng. 489:100-106.
69. Woese, C., E. Stackebrandt, W. Weisburg, B. Paster, M. Madigan, V. Fowler, C. Hahn, P. Blanz, R. Gupta, K.
Nealson, and G. Fox. 1984. The phylogeny of purple bacteria: The alpha subdivision. Syst. Appl. Microbiol.
5:315-326.
70. Tebo, B., K. Nealson, S. Emerson and L. Jacobs. 1984. Microbial mediation of Mn(II) and Co(II) precipitation
at the 02/H2S interface in two anoxic fjords. Limnol. Oceanogr. 29:1247-1258.
71. Haygood, M., and K. Nealson. 1985. Mechanisms of iron regulation of luminescence in Vibrio fischeri. J.
Bacteriol. 162:209-216.
72. Cohn, D., A. Mileham, M. Simon, K. Nealson, S. Rausch, D. Bonam and T. Baldwin. 1985. Nucleotide
sequence of the luxA gene of Vibrio harveyi and the complete amino acid sequence of the alpha subunit of
bacterial luciferase. J. Biol. Chem. 260:6139-6146.
73. Haygood, M., and K. Nealson. 1985. The effect of iron on the growth and luminescence of the symbiotic
bacterium Vibrio fischeri. Symbiosis 1:39-51.
74. Burdige, D., and K. Nealson. 1985. Microbial manganese reduction by enrichment cultures from coastal
marine sediments. Appl. Environ. Microbiol. 50:491-497.
75. Nealson, K., and Arneson, A. 1985. Marine bioluminescence: About to see the light. Oceanus 28:13-18.
76. Tebo, B., C. Taylor, K. Nealson and S. Emerson. 1985. In situ Mn(II) binding rates at the oxic/anoxic interface
12
in Saanich Inlet, B.C., Canada. pp. 210-221. In: Planetary Ecology. Ed. D. Caldwell, J. Brierly and C. Brierly
77. Nealson, K., A. Arneson and M. Huber. 1986. Identification of marine organisms using kinetic and spectral
properties of their bioluminescence. Mar. Biol. 91:77-83.
78. Burdige, D., and K. Nealson. 1986. Chemical and microbiological studies of sulfide-mediated manganese
reduction. Geomicrobiol J. 4:361-387.
79. Maki, J., B. Tebo, F. Palmer, K. Nealson and J. Staley. 1987. The abundance and biological activity of
manganese-oxidizing bacteria and Metallogenium-like morphotypes in Lake Washington, USA. FEMS
Microbiol. Ecol. 45:21-29.
80. Levisohn, R., Moreland, J. and K. Nealson. 1987. Isolation and characterization of a generalized transducing
phage for the marine luminous bacterium Vibrio fischeri MJ-1. J. Gen. Microbiol. 133:1577-1582.
81. Delong, E., D. Steinhauer, A. Israel and K. Nealson. 1987. Isolation of the lux genes from Photobacterium
leiognathi and expression in Escherichia coli. Gene 54:203-21 0.
82. Kepkay, P., and K. Nealson. 1987. Growth of a manganese oxidizing Pseudomonas sp. in continuous culture.
Arch. Microbiol. 148:63-67.
83. Steinberg, D., G. Peterson, K. Nealson, and W. Maiese. 1987. Evaluation of bioluminescence as a prescreen
for antitumor agents. pp. 511-514. In: Bioluminescence and Chemiluminescence: New Perspectives. Ed. J.
Schoelmerich, R. Andreesen, A. Kapp, M. Ernst, and W. Woods. Wiley and Sons, NY.
84. Nealson, K., D. Steinberg, A. Israel, G. Peterson and W. Maiese. 1987. Chemical stimulation of
bioluminescence in E. coli. pp. 393-396. In: Bioluminescence and Chemiluminescence: New Perspectives.
Ed. J. Schoelmerich, R. Andreesen, A. Kapp, M. Ernst, and W. Woods. Wiley and Sons, NY.
85. Nealson, K. H. B. Tebo and R. Rosson. 1988. Occurrence and mechanisms of microbial oxidation of
manganese.. Adv. Applied Microbiol. 33:279-318.
86. Nealson, K., T. Schmidt and B. Bleakley. 1988. Luminescent bacteria: symbionts of nematodes and
pathogens of insects. pp. 101-113. In: Cell to Cell Signals in Plant, Animal and Microbial Symbiosis. Ed. S.
Scannerini. Springer Verlag, Berlin.
87. Lapota, D., C. Galt, J. Losee, H. Huddell, J. Orzech and K. Nealson. 1988. Observations and measurements
of planktonic bioluminescence in and around a milky sea. J. Exp. Mar. Biol. Ecol. 119:55-81.
88. Richardson, W., T. Schmidt and K. Nealson. 1988. Identification of an anthraquinone pigment and a
hydroxystilbene antibiotic from Xenorhabdus luminescens. Appl. Environ. Microbiol. 54:1602-1605.
89. Myers, C. and K. Nealson. 1988. Bacterial manganese. reduction and growth with manganese oxide as the
sole electron acceptor. Science 240:1319-1321.
90. Richardson, L., C. Aguilar and K. Nealson. 1988. Manganese oxidation in pH and 0 2 microenvironments
produced by phytoplankton. Limnol. Oceanogr. 33:352-366.
91. Bleakley, B., and K. Nealson. 1988. Characterization of primary and secondary forms of Xenorhabdus
luminescens strain Hm. FEMS Microbiol. Ecol. 53:241-250.
92. Schmidt, T., B. Bleakley and K. Nealson. 1988. Characterization of an extracellular protease from the insect
pathogen Xenorhabdus luminescens. Appl. Environ. Microbiol. 54:2793-2797.
93. Myers, C., and K. Nealson. 1988. Microbial reduction of manganese oxides: Interactions with iron and sulfur.
Geochim. Cosmochim. Acta 52:2727-2732.
13
94. Nealson, K., R. Rosson and C. Myers. 1989. Mechanisms of oxidation and reduction of manganese. pp. 383411. In: Metal Ions and Bacteria. Ed. T. Beveridge and R. Doyle. John Wiley and Sons, NY.
95. Richardson, L., and K. Nealson. 1989. Distributions of manganese, iron and manganese oxidizing bacteria in
Lake Superior sediments of different organic carbon content. J. Great Lakes Res. 1 5:123-132.
96. Schmidt, T., K. Kopecky and K. Nealson. 1989. Bioluminescence of the insect pathogen Xenorhabdus
luminescens. Appl. Environ. Microbiol. 55:26-7-2612.
97. Seale, D., M. Boraas, D. Holen and K. Nealson. 1990. Use of bioluminescent bacteria, Xenorhabdus
luminescens, to measure predation on bacteria by freshwater microflagellates. FEMS Microbiol. Ecol. 73:3140.
98. Bermudes, D., V. Gerlach and K. Nealson. 1990. Effects of culture conditions on mycelial growth and
luminescence in Panellus stypticus. Mycologia 82:295-305.
99. Nealson, K. and C. Myers. 1990. Iron reduction by bacteria: A potential role in the genesis of banded iron
formations. Amer. J. Sci. 290-A:35-45.
100.
Nealson, K., T. Schmidt and B. Bleakley. 1990. Physiology and biochemistry of Xenorhabdus- pp. 271284. In: Entomopthogenic Nematodes in Biological Control. Ed. R. Gaugler and H. Kaya. CRC Press, Boca
Raton, FL.
101.
Frackman, S., and K. Nealson. 1990. The molecular genetics of Xenorhabdus. pp. 285-300. In:
Entomopathogenic Nematodes in Biological Control. Ed. R. Gaugler and H. Kaya. CRC Press, Boca Raton,
FL
102.
Frackman, S., M. Anhalt, and K. Nealson. 1990. Cloning, organization, and expression of the
bioluminescence genes of Xenorhabdus luminescens. J. Bacteriol. 172:5767-5773.
103.
Myers, C., and K. Nealson. 1990. Respiration-linked proton translocation coupled to anaerobic reduction
of manganese(IV) and iron(III) in Shewanella putrefaciens MR-1. J. Bacteriol. 172:6232-6238.
104.
Myers, C., and K.H. Nealson. 1990. Iron Mineralization by bacteria: metabolic coupling of iron reduction to
cell metabolism in Alteromonas putrefaciens strain MR-1. pp. 131-149 In: R.B. Frankel and R.P. Blakemore
(eds) Iron Biominerals. Plenum Press, NY. 1990.
105.
Wimpee, C.F., T. Nadeau, and K.H. Nealson. 1991. Development of species-specific hybridization probes
for marine luminous bacteria by using in vitro DNA amplification. Appl. Environ. Microbiol. 57:1319-1324.
106.
Bermudes, D., M. E. Boraas and K.H. Nealson. 1991. In vitro antagonism of bioluminescent fungi by
Trichoderma harzianum. Mycopathologia 115:19-29.
107.
Nealson, K.H. 1991. Luminous bacteria symbiotic with entomopathogenic nematodes. pp. 205-218 In: L.
Margulis and R. Fester (eds). Symbiosis as a source of Evolutionary Innovation. MIT Press, Boston, Mass.
108.
Nealson, K.H., C.R. Myers, and B.B. Wimpee. 1991. Isolation and identification of manganese reducing
bacteria and estimates of microbial Mn(IV)-reducing potential in the Black Sea. Deep Sea Res. 38:S907S920.
109.
Nealson, K.H. and J.W. Hastings. 1991. The Luminous bacteria. pp. 625-639. In: The Prokaryotes.
Second Edition. Vol-1. (eds.) A. Balows, H.G. Trueper, M. Dworkin, W. Harder, and K-H. Schleifer. Springer
Verlag, New York, NY.
110.
Nealson, K.H. 1991. The manganese-oxidizing bacteria. pp. 2310-2320. In: The Prokaryotes Second
14
Edition. Vol. 1. (eds.) A. Balows, H.G. Trueper, M. Dworkin, W. Harder, and K-H. Schleifer. Springer Verlag,
New York, NY.
111.
Tebo, B.M., Rosson, R.A. and Nealson, K.H. 1991. Potential for Mn(II) oxidation and Mn(IV) reduction to
co-occur in the suboxic zone of the Black Sea. pp. 173-185: In: Black Sea Oceanography. Eds. E. lzdar and
J.W. Murray. Kluwer Acad. Publishers, Netherlands.
112.
Nealson, K.H. and C.R. Myers. 1992. Microbial reduction of manganese and iron: new approaches to
carbon cycling. Appl. Environ. Microbiol. 58: 439-443.
113.
Burdige, D.J., S. P. Dhakar, and K.H. Nealson. 1992. Effects of manganese oxide mineralogy on
microbial and chemical manganese reduction. Geomicrobiol. J. 10:27-48.
114.
Bermudes, D., R.H. Petersen, and K.H. Nealson. 1992. Low-level bioluminescence detected in Mycena
haematopus basidiocarps. Mycologia 84(5):799-802.
115.
Perry, K.A., J.E. Kostka, G.W. Luther III and K.H. Nealson. 1993. Mediation of suIfur speciation by a
Black Sea facultative aerobe. Science 259:801-803.
116.
Nealson, K.H., B. Wimpee, and C. Wimpee. 1993. Identification of Vibrio splendidus as a member of the
planktonic luminous bacteria from the Persian Gulf/Kuwait region using luxa probes. Appl. Environ. Microbiol.
59:2684-2689.
117.
Nealson, K.H. 1993. Bacterial bioluminescence: Three decades of enlightenment. Nav. Res. Rev 45:1320.
118.
Bermudes, D., K. Nealson and R. Akhurst. 1993. The genus Xenorhabdus. J. Coll. Sci. Teaching
Nov:105-107.
119.
Saffarini, D., and K.H. Nealson. 1993. Sequence and genetic characterization of etrA, an fnr analogue
that regulates anaerobic respiration in Shewanella putrefaciens MR-1 . J. Bacteriol. 175:7938-7944.
120.
Aguilar, C. and K.H. Nealson. 1993. Manganese reduction in Oneida Lake, New York: estimates of spatial
and temporal manganese flux. Can. J. Fish. Aquat. Sci. 51:185-196.
121.
Scott, J.H. and K.H. Nealson. 1994. A biochemical study of the intermediary carbon metabolism of
Shewanella putrefaciens. J. Bacteriol. 176:3408-3411.
122.
Saffariini, D.A., T.J. DiChristina, D. Bermudes, and K.H. Nealson. 1994. Anaerobic respiration of
Shewanella putrefaciens requires both chromosomal and plasmid-borne genes. FEMS Microbiol. Lett.
119:271-278.
123.
Nealson, K.H., D.A. Saffarini and S.J. Lukiewicz. 1994. Bacterial mutant strains unable to reduce
nitroxides. Curr. Topics Biophys.18:39-45.
124.
Nealson, K.H., D.A. Saffarini, D. Moser and M. J. Smith. 1994. A spectrophotometric method for
monitoring tactic responses of bacteria under anaerobic conditions. J. Microbiol. Meth. 20:211-218.
125.
Nealson, K.H. and D.A. Saffarini. 1994. Iron and manganese in anaerobic respiration: Environmental
significance, physiology, and regulation. Annu. Rev. Microbiol. 48:311-343.
126.
Myers, C.R. and K.H. Nealson. 1994. Biological and chemical mechanisms of manganese reduction in
aquatic and sediment systems. pp. 205-223. In: Transport and Transformation of Contaminants Near the
Sediment-Water Interface. (eds. J. V. DePinto, W. Lick and J. Paul). Lewis Publishers, Ann Arbor.
127.
Tsapin, A.I., D.S. Burbaev, K.H. Nealson, and O.I. Keppen. 1994. Studies of the Iron-sulphur centers of
15
the bacteria Shewanella putrefaciens (MR-1). Appl. Magn. Reson. 7:559-566.
128.
Namsareev, B., V. Samarkin, K. Nealson, J.V. Klump, L. Buchholz, C.C. Remsen, and C. Myers. 1995.
Microbial processes of carbon and sulfur in Lake Michigan sediments. Microbiologia. 63: 730-735.
129.
Kostka, J.E., G. W. Luther III, and K.H. Nealson. 1995. Chemical and biological reduction of Mn(III)pyrophosphate complexes: potential importance of dissolved Mn(III) as an environmental oxidant. Geochim.
Cosmochim. Acta. 59: 885-894.
130.
Nealson, K.H., D. Moser, and D.A. Saffarini. 1995. Anaerobic electron acceptor chemotaxis in
Shewanella putrefaciens. Appl. Environ. Microbiol. 61:1551-1554.
131.
Kostka, J.E., and K.H. Nealson. 1995. Dissolution and reduction of magnetite by bacteria. Environ. Sci.
Technol. 29:2535-2540.
132.
Tsapin, A.I., D.S. Burbaev, K.H. Nealson, and O.I. Keppen. 1995. Investigations of succinate
dehydrogenase and fumarate reductase in whole cells of Shewanella putrefaciens using electron spin
resonance spectroscopy. Appl. Magn. Reson. 9:509-516.
133.
Hosseini, P.K., and K.H. Nealson. 1995. Symbiotic luminous soil bacteria: unusual regulation for an
unusual niche. Photochem. Photobiol. 62:633-640.
134.
Forst, S., and K.H. Nealson. 1996. Molecular biology of the symbiotic-pathogenic bacteria Xenorhabdus
spp. and Photorhabdus spp. Microbiol. Rev. 60:21-43.
135.
Morse, D.E., and K.H. Nealson. 1996. Interdisciplinary research at the nation’s coastal laboratories. Biol.
Bull. 190:260-268.
136.
Moser, D.P. and K.H. Nealson. 1996. Growth of the facultative anaerobe Shewanella putrefaciens by
elemental sulfur reduction. Appl. Environ. Microbiol. 62:2100-2105.
137.
Krause, B., T.J. Beveridge, C.C. Remsen, and K.H. Nealson. 1996. Structure and properties of novel
inclusions in Shewanella putrefaciens. FEMS Microbiol. Lett. 139:63-69.
138.
Kostka, J.E., J.W. Stucki, K.H. Nealson, and J. Wu. 1996. Reduction of structural Fe(III) in smectite by a
pure culture of Shewanella putrefaciens strain MR-1. Clays Clay Min. 44:522-529.
139.
Tsapin, A.I., K.H. Nealson, T. Meyers, M.A. Cusanovich, J. VanBeeumen, L.D. Crosby, B.A Feingerg, and
C. Zhang. 1996. Purification and properties of a low-redox-potential tetraheme cytochrome c3 from
Shewanella putrefaciens. J. Bacteriol. 178: 178:6386-6388.
140.
Moser, D.P., J.R. Brozowski, and K.H. Nealson. 1996. Elemental analysis for biomass determination in
the presence of insoluble substrates. J. Microbiol. Methods 26:271-278.
141.
Nealson, K.H. 1997. Sediment bacteria: who’s there, what are they doing, and what’s new? Annu. Rev.
Earth Planet. Sci. 25:403-434.
142.
Little, B., P. Wagner, K. Hart, R. Ray, K. Nealson, and C. Aguilar. 1997. The role of biomineralization in
microbiologically influenced corrosion. Corrosion 97, Paper # 215:1-11. Nat. Assoc. Corr. Eng., Houston, TX.
143.
MacGregor, B.J., D.P. Moser, K.H. Nealson, and D.A. Stahl. 1997. Crenarchaeota in Lake Michigan
sediments. Appl. Environ. Microbiol. 63:1178-1181.
144.
Szallas, E., C. Koch, A. Fodor, J. Burghardt, O. Buss, A. Szentirmai, K. H. Nealson, and E. Stackebrandt.
1997. Phylogenetic evidence for the taxonomic heterogeneity of Photorhabdus. Int. J. Syst. Bacteriol. 47:402407.
16
145.
Hosseini, P. and K. H. Nealson. 1997. Control of bioluminescence in phase variants of Photorhabdus
luminescens Hm and in Hyp, a hyperpigmented mutant obtained from a phase II variant. Symbiosis 22:191203.
146.
Krause, B., and K. H. Nealson. 1997. Physiology and enzymology involved in denitrification by
Shewanella putrefaciens. Appl. Environ. Microbiol. 63:1-11.
147.
Nealson, K. H., and B. Little. 1997. Breathing manganese and iron: solid-state respiration. Adv. Appl.
Microbiol. 45:213-239.
148.
Kostka, J. and K.H. Nealson. 1997. Isolation, cultivation, and characterization of iron- and manganesereducing bacteria. In: Techniques in Microbial Ecology (ed.) R. Burlage. pp. 58-78.
149.
Nealson, K.H. and D.A. Stahl. 1997. Microorganisms and biogeochemical cycles: what can we learn from
layered microbial communities? Pp. 1-34. In: Geomicrobiology, Banfield, J. and Nealson, K.H. (eds).
Mineral. Soc. America, Washington, D.C.
150.
Ferrenkopf, A.M., M.E. Dollhopf, S.N. Chadhain, G.W. Luther III, and K.H. Nealson. 1997. Iodate
reduction by bacteria in the Arabian Sea. Mar. Chem. 57:347-354.
151.
Nealson, K.H. 1997. The limits of life on Earth and searching for life on Mars. J. Geophys. Res.
102:23,675-23,675-23686.
152.
Nealson, K.H. 1997. Nannobacteria – Size limits and evidence. Science 276:1776.
153.
Venkateswaren, K., M. E. Dollhopf, R. Aller, E. Stackebrandt, and K. H. Nealson. 1998. Shewanella
amazonensis sp. nov., a novel metal-reducing facultative anaerobe from Amazonian shelf muds. Int. J.
Systematic Bacteriol. 48: 965-972.
154.
Larsen, I., B. Little, K. H. Nealson, R. Ray, A. Stone, and J. Tian. 1998. Manganite reduction by
Shewanella putrefaciens MR-4. Amer. Mineralogist 83:1564-1572.
155.
Little, B., P. Wagner, K. Hart, R. Ray, D. Lavoie, K. Nealson, and C. Aguilar. 1998. The role of
biomineralization in microbiologically influenced corrosion. Biodegradation 9:1-10.
156.
Aguilar, C. and K. H. Nealson. 1998. Biogeochemical cycling of manganese in Oneida Lake, New York:
whole lake studies of manganese. J. Great Lakes Res. 24:93-104.
157.
Brown, G.E., V.E. Henrich, W.H. Casey, D.L. Clark, C. Eggleston, A. Felmy, D. W. Goodman, M. Gratzel,
G. Maciel, M. I. McCarthy, K. H. Nealson, D. A. Sverjensky, M. F. Toney, J. M. Zachara. 1999. Metal Oxide
Surfaces and Their Interactions with Aqueous Solutions. Chem. Rev. 99:77-174.
158.
Nealson, K. H. 1999. Early observations defining quorum-dependent gene expression. Pp. 277-289. In:
Cell to Cell Signalling in Bacteria (eds. G. M. Dunny and S. Winans) Amer. Soc. Microbiol., Washington, D.C.
159.
Nealson, K. H. 1999. Post-Viking microbiology: new approaches, new data, new insights. Origins of Life
and Evol. Biosph. 29:73-93.
160.
Nealson, K.H. 1999. The search for extraterrestrial life. Engineering and Science. No. 1-2:30-39.
161.
Leonardo, M.R., D. P. Moser, E. Barbieri, C. Brantner, B. Paster, E. Stackebrandt, and K. H. Nealson.
1999. Shewanella pealeana sp. Nov., a member of a microbial community associated with the accessory
nidamental gland of the squid Loligo pealei. Int. J. Syst. Bacteriol. 49:1341-1351.
162.
Venkateswaren, K., D. P. Moser, M. E. Dollhopf, D. Pl. Lies, D. A. Saffarini, B. J. MacGregor, D. B.
17
Ringelberg, D. C. White, M. Nishijima, H. Sano, J. Burghardt, E. Stackebrandt, and K. H. Nealson. 1999.
Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov. Int. J.
Syst. Bacteriol. 49:705-724.
163.
Kostka, J.E., J. Wu, K. H. Nealson, and J. W. Stucki. 1999. The impact of structural Fe(III) reduction by
bacteria on the surface chemistry of smectite clay minerals. Geochim. Geochos. Acta 63:3705-3713.
164.
Gaidos, E.J., K.H. Nealson, and J.L. Kirschvink. 1999. Life in ice-covered oceans. Science 284:16311633.
165.
Nealson, K. H. and P. G. Conrad. 1999. Life: past, present and future. Phil. Trans. Roy. Soc. Lond. B
354: 1-17.
166.
Beard, B.L., C.M. Johnson, L. Cox, H. Sun, K. H. Nealson and C. Aguilar. 1999. Iron isotope
biosignatures. Science. 285:1889-1892.
167.
Teece, M., M. Fogel, M. Dollhopf, and K. Nealson. 1999. Isotopic fractionation associated with
biosynthesis of fatty acids by a marine bacterium under oxic and anoxic conditions. Org. Geochem. 30:15711579.
168.
Leys, D.L., A. S. Tsapin, K. H. Nealson, T. E. Meyer, M. A. Cusanovich, and J. J. Van Beeumen. 1999.
Structure and mechanism of the flavocytochrome c fumarate reductase of Shewanella putrefaciens MR-1.
Nature Struct. Biol. 6:1113-1117.
169.
Rothe, J., E. Kneedler, K. Pecher, B. P. Tonner, K. H. Nealson, T. Grundl, W. Meyer-Ilse, and T. Warwick.
1999. Spectromicroscopy of Mn-distributions in micronodules produced by biomineralization. J. Synchrotron
Rad. 6:359-361.
170.
Tonner, B., T. Droubay, J. Denlinger, W. Meyer-Ilse, T. Warwick, J. To the, E. Kneedler, K. Pecher, K.
Nealson, and T. Grundl. 1999. Soft X-ray spectroscopy and imaging of interfacial chemistry in environmental
specimens. Surf. Interface Anal. 27:247-258.
171.
Anbar, A.D., J. Roe, J. Barling, and K. H. Nealson. 2000. Nonbiological fractionation of iron isotopes.
Science 288:126-128.
172.
Weiss, B.P., Y. Yung, and K. H. Nealson. 2000. Atmospheric energy for subsurface life on mars? Proc.
Nat. Acad. Sci. USA 97:1395-1399.
173.
Grimes, D.J., A. L. Mills, and K. H. Nealson. 2000. The importance of viable but nonculturable bacteria in
biogeochemistry. Pp. 209-227 In: Nonculturable Microorganisms in the Environment. (R. R. Colwell and D. J.
Grimes, eds.). ASM Press, Wash. D.C.
174.
Ozawa, K., A. Tsapin, K. H. Nealson, M. A. Cusanovich, and H. Akutsu. 2000. Expression of a tetraheme
protein, Desulfovibrio vulgaris Miyazaki F. Cytochrome c3, in Shewanella oneidensis MR-1. Appl. Environ.
Microbiol. 66:4168-4171.
175.
Tsapin, A.I., M. G. Goldfeld, G. D. McDonald, and K. H. Nealson. 2000. Iron(VI): hypothetical candidate
for the martian oxidant. Icarus 147:68-78.
176.
Kemner, K.M., B. Lai, J. Maser, M.A. Schneegurt, Z. Cai, P.P. Ilinski, C.F. Kulpa, D.G. Legnini, K. H.
Nealson, S. T. Pratt, W. Rodrigues, M. L. Tischler, and W. yun. 2000. Use of the high-energy X-ray
microprobe at the advanced photon source to investigate the interactions between metals and bacteria. Pp.
319-322 In: X-Ray Microscopy: Proc. 6th Int. Conf. W. Meyer-Ilse, T. Warwick, and D. Attwood (eds.) Amer.
Inst. Physics.
177.
Dollhopf, M.E., K.H. Nealson, D.M. Simon and G.W. Luther III. 2000. Kinetics of Fe(III) and Mn(IV)
18
reduction by the Black Sea strain of Shewanella putrefaciens using in situ solid state voltammetric Au/Hg
electrodes. Mar. Chem. 70:171-180.
178.
Tsapin, A.I., M. Storrie-Lombardi, G.D. McDonald, and K.H. Nealson. 2000. Application of computer
tomography (CT) for search for life in extreme environments. New Era in Bioastronomy 213:387-389.
179.
Conrad, P.G., and K. H. Nealson. 2001. A non-earthcentric approach to life detection. Astrobiology 1:1524.
180.
Duxbury, N.S., I.A. Zotikov, K.H. Nealson, V.E. Romanovsky, and F.D. Carsey. 2001. A numerical model
for an alternative origin of Lake Vostok and its exobiological implications for Mars. J. Geophys. Res. 106:
1453-1462.
181.
Stein, L., M. LaDuc, T. Grundl, and K. Nealson. 2001. Bacterial and archael populations associated with
freshwater ferromanganous micronodules and sediments. Environmental Microbiol. 3: 10-18.
182.
Tsapin, A., I. Vandenberghe, K. Nealson, J. Scott, T. Meyer, M. Cusanovich, E. Harada, T. Kaizu, H.
Akutsu, D. Leys, and J. Van Beeumen. 2001. Identification of a small tetraheme cytochrome c and a
flavocytochrome c as two of the principal soluble cytochromes c in Shewanella oneidensis strain MR-1. Appl.
Environ. Microbiol. 67:3236-3244.
183.
Van Mooy, B., B. MacGregor, D. Hollander, K. Nealson, and D. Stahl. 2001. Evidence for tight coupling
between active bacteria and particulate organic carbon during seasonal stratification of Lake Michigan.
Limnol. Oceanogr. 46:1202-1208.
184.
MacGregor, B., D. Moser, B. Baker, E. Alm, M. Maurer, K. Nealson, and D. Stahl. 2001. Seasonal and
spatial variability in Lake Michigan sediment small-subunit rRNA concentrations. Appl. Environ. Microbiol.
67:3908-3922.
185.
Duxbury, N.S., K.H. Nealson, V.E. Romanovsky 2001. On the possibility of clathrate hydrates on the
Moon, J. Geophys. Res. -PLANETS, No E11, 27811-27813
186.
Ching, W.K., A.J. Colussi, H.J. Sun, K.H. Nealson, and M.R. Hoffman. 2001. Escherischi coli disinfection
by electrolytic discharges. Env. Sci. Tech. 35:4139-4144.
187.
Bergmann, U., P. Glatzel, J. Robblee, J. Messinger, C. Fernandez, R. Cinco, H. Visser, K. McFarlane, E.
Bellacchio, S. Pizarro, K. Sauer, V. Yachandra, M. Klein, B. L. Cox, K. Nealson, and S. Cramer. 2001. Highresolution X-ray spectroscopy of rare events: a different look at local structure and chemistry. J. Synchrotron
Rad. 8: 199-203.
188.
Murray, A.E., D. Lies, G. Li, K. Nealson, J. Zhou, and J. Tiedje. 2001. DNA/DNA hybridization to
microarrays reveals gene-specific differences between closely related microbial genomes. Proc. Nat. Acad.
Sci. USA 98: 9853-9858.
189.
Kemner, K., S. Kelly, K. Orlandini, A.I. Tsapin, M.G. Goldfeld, Y.D. Perfiliev, and K. H. Nealson. 2001.
XAS investigations of Fe(VI). J. Synchrotron Rad. 8: 949-951.
190.
Lanoil, B.D., R. Sassen, M. LaDuc, S.T. Sweet, and K.H. Nealson. 2001. Bacteria and Archaea physically
associated with Gulf of Mexico gas hydrates. Appl. Environ. Microbiol. 67:5143-5153.
191.
Storrie-Lombardi, M.C., W. Hug, G. McDonald, A. Tsapin, and K. Nealson. 2001. Hollow cathode ion
lasers for deep ultraviolet Raman spectroscopy and fluorescence imaging. Rev. Sci. Instruments 72:44524459.
192.
De Stasio, G., B. Gilbert, B.H. Frazer, K. H. Nealson, P.G. Conrad, V. Livi, M. Labrenz, and J. F. Banfield.
2001. The multidisciplinarity of spectromicrosccopy: from geomicrobiology to archaeology. J. Elec.
19
Spectroscopy Rel. Phenom. 114-116:997-1003.
193.
Nealson, K.H., and W. A. Ghiorse. 2001. Geobiology: exploring the interface between the biosphere and
the geosphere. Amer. Acad. Microbiology. Wash. D.C.
194.
Nealson, K.H. 2001. Searching for life in the universe: Lessons from the Earth. Ann. New York Acad.
Sci. 950:241-258.
195.
Thompson, D.K., A.S. Beliaev, C.S. Giometti, S.L. Tollaksen, T. Khare, D.P. Lies, K.H. Nealson, H. Lim,
J. Yates III, C.C. Brandt, J.M. Tiedje, and J. Zhou. 2002. Transcriptional and proteomic analysis of a ferric
uptake regulator (Fur) mutant of Shewanella oneidensis: Possible involvement of Fur in energy metabolism,
transcriptional regulation, and oxidative stress. Appl. Environ. Microbiol. 68(2):881-892.
196.
Beliaev, A.S., D.K. Thompson, T. Khare, H. Lim, C.C. Brandt, G. Li, A.E. Murray, J.F. Heidelberg, C.S.
Giometti, J. Yates III, K.H. Nealson, J.M. Tiedje, and J. Zhou. 2002. Gene and protein expression profiles of
Shewanella oneidensis during anaerobic growth with different electron acceptors. OMICS: A Journal of
Integrative Biology, 6(1):
197.
Sorokin, D.Y., V.M. Gorlenko, T. P. Tourova, T. V. Kalganova, A. I. Tsapin, K. H. Nealson, and G.J.
Kuenen. 2002. Thioalkalimicrobium cyclicum sp.nov., and Thioalkalivibrio jannaschii sp. Nov., new species of
haloalkaliphilic, obligately chemolithoautotrophic sulfur-oxidizing bacteria from hypersaline alkaline Mono
Lake (California). Int. J. Syst. Env. Microbiol. 52:913-920.
198.
Salmassi, T.M., K. Venkateswaren, M. Satomi, K.H. Nealson, D.K. Newman, and J.G. Hering. 2002.
Oxidation of arsenite by Agrobacterium albertimagni, AOL15, sp.nov., Isolated from Hot Creek, CA.
Geomicrobiol. J. 19:53-66.
199.
Johnson, C.M., J.L. Skulan, B.L. Beard, H. Sun, K.H. Nealson, and P.S. Braterman. 2002. Isotopic
fractionation between Fe(III) and Fe(II) in aqueous solutions. Earth Plan. Sci. Let. 195:141-153.
200.
Nealson, K.H. and B. Lea Cox. 2002. Microbial metal-ion reduction and Mars: extraterrestrial
expectations? Curr. Opp. Microbiol. 5:296-300.
201.
Beliaev, A.S., D.K. Thompson, M.W. Fields, L.Wu, D. P. Lies, K.H. Nealson, and J. Zhou. 2002.
Microarray transcription profiling of a Shewanella oneidensis etrA mutant. J. Bacteriol. 184:4612-4616.
202.
Cox, L., R. Popa, D.A. Bazylinski, B. Lanoil, S. Douglas, A. Belz, D. L. Engler, and K.H. Nealson. 2002.
Organization and elemental analysis of P-, S-, and Fe-rich inclusions in a population of freshwater
magnetococci. Geomicrobiol. J. 19:387-406.
203.
Stein, L.S., G. Jones, B. Alexander, K. Edmund, C. Wright-Jones, and K.H. Nealson. 2002. Intriguing
microbial diversity associated with metal-rich particles from a freshwater reservoir. FEMS Microbiology
Ecology. 1421:1-10.
204.
Tsapin, A., M. Goldfeld, and K. Nealson. 2002. Viking’s experiments and hypothesis that Fe(VI) is a
possible candidate as a Martian oxidant. Icarus 159:268.
205.
Nealson, K.H., A. Belz, and B. McKee. 2002. Breathing metals as a way of life: geobiology in action. Ant.
V. Leeuwenh. 81:215-222.
206.
Heidelberg, J. and others. 2002. Genome sequence of the dissimilatory metal ion-reducing bacterium
Shewanella oneidensis Nature Biotech. 20, 1118 – 1123
207.
Nealson, K.H., A. Tsapin, and M. Storrie-Lombardi. 2002. Searching for life in the Universe:
unconventional methods for an unconventional problem. Int. Microbiol. 5:223-230.
20
208.
Beard, B.L., C.M. Johnson, J.L. Skulan, K.H. Nealson, L. Cox, and H. Sun. 2003. Applications of Fe
isotopes to tracing the geochemical and biological cycling of Fe. Chem. Geol. 14137:1-31.
209.
Takai, K., F. Inagaki, S. Nakagawa, H. Hirayama, T. Nunoura, Y. Sako, K.H. Nealson, and K. Horikoshi.
2003. Isolation and phylogenetic diversity of members of previously uncultivated ε-proteobacteria in deep-sea
hydrothermal fields. FEMS Microbio. Lett. 218:167-174.
210.
Nealson, K.H. 2003. Harnessing microbial appetites for remediation. Nature Biotech. 21:5-6.
211.
Bakermans, C., A.I. Tsapin, V. Souza-Egipsy, D.A. Gilichinsky, and K.H. Nealson. 2003. Reproduction
and metabolism at -10oC of bacteria isolated from Siberian permafrost. Environ. Microbiol. 5: 321-326
212.
Pecher, K., D. McCubbery, E. Kneidler, J. Rothe, J. Bargar, G. Meigs, L. Cox, K. Nealson and B. Tonner.
2003. Quantitative charge state analysis of manganese biominerals in aqueous suspension using Scanning
Transmission X-ray Microscopy (STXM). Geochim Cosmochim. Acta 67:1089-1098
213.
Giometti, C.S., T. Khare, S.L. Tollaksen, A. Tsapin, W. Zhu, J.R. Yates III, and K.H. Nealson. 2003.
Analysis of the Shewanella oneidensis proteome by two-dimensional gel electrophoresis under nondenaturing conditions. Proteomics 3: 1-15.
214.
Christensen, P.R., J.L. Bandfield, J.F. Bell, III, N. Gorelick, V. E. Hamilton, A. Ivanov, B. M. Jakosky, H.H.
Kieffer, M.D. Lane, M.C. Malin, T. McConnochie, A.S. McEwen, H.Y. McSween, Jr., G.L. Mehall, J.E.
Moesch, K.H. Nealson, J.W. Rice, Jr., M.I Richardson, S.W. Ruff, M.D. Smith, T.N. Titus, and M.B. Wyatt.
2003. Morphology and composition of the surface of Mars: Mars Odyssey THEMIS results. Science
300:2056-20.
215.
Kloepfer, J.A., R.E. Mielke, M.S. Wong, K.H. Nealson, G. Stucky, and J.L. Nadeau. 2003. Quantum dots
as strain- and metabolism-specific microbiological labels. Appl. Environ. Microbiol. 69:4205-4213.
216.
Inagaki, F., K. Takai, H. Hirayama, Y. Yamato, K.H. Nealson, and K. Horikoshi. 2003. Distribution and
phylogenetic diversity of the subsurface microbial community in a Japanese epithermal gold mine.
Extremophiles. 7:307-317.
217.
Nealson, K.H. and W. Berelson. 2003. Layered microbial communities and the search for life in the
universe. Geomicrobiol. J. 20:451-462.
218.
Dorn ED, G.D.McDonald GD, M.C. Storrie-Lombardi, and K.H. Nealson KH. 2003 Principal component
analysis and neural networks for detection of amino acid biosignatures. Icarus 166:403-409.
219.
Nealson, K.H., and J. Scott. 2003. Ecophysiology of the Genus Shewanella. In: Dworkin et al. eds. The
Prokaryotes: An evolving electronic resource for the microbiological community. 3rd Ed. Release 3.7., Nov.
2003. Springer-Verlag, N.Y. http://link.springer-ny.com/link/service/books/10125/.
220.
Jakosky, B.M., K.H. Nealson,l C. Bakermans, R.E. Ley, and M.T. Mellon. 2003. Sub-freezing activity of
microorganisms and the potential habitability of Mars’ polar regions. Astrobiol. J. 3: 343-350.
221.
DesMarais, D.J. and others. 2003. The NASA Astrobiology Roadmap. Astrobiol. J. 3:219-235.
222.
Inagaki, F., K. Takai, H. Kobayashi, K.H. Nealson, and K. Horikoshi. 2003. Sulfurimonas autotrophica
gen. nov., sp. Nov., a novel sulfur-oxidizing ε-proteobacterium isolated from hydrothermal sediments in the
mid-Okinawa trough. Int. J. Syst. Evol. Microbiol. 53:1801-1805.
223.
Takai, K., H. Kobayashi, K.H. Nealson, and K. Horikoshi. 2003. Deferribacter desulfuricans sp. Nov., a
novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent. Int. J.
Syst. Evol. Microbiol. 53: 839-846.
21
224.
Nealson, K.H. and R. Rye. 2003. Evolution of Metabolism. Pp.41-61 in: Treatise on Geochemistry,
Volume 8. Ed. W.H. Schlesinger, H.D. Holland, and K.K. Turekian. Elsevier Pergammon, Amsterdam.
225.
Gilbert, B., B.H. Frazer, A. Belz, P. Conrad, K. Nealson, D. Haskel, J.C. Lang, G.Srajer, and G. DeStasio.
2003. Multiple scattering calculations of bonding and X-ray absorption spectroscopy of manganese oxides.
J. Phys. Chem. A 107:2839-2847
226.
Takai, K., K.H. Nealson, and K. Horikoshi. 2004. Hydrogenomonas thermophila gen. nov., sp. Nov., a
novel thermophilic, hydrogen-oxidizing chemolithoautotroph within the ε-Proteobacteria, isolated from a black
smoker in a Central Indian Ridge hydrothermal field. Int. J. Syst. Evol. Microbiol. 54: 25-32.
227.
Bakermans, C. and K.H. Nealson. 2004. Relationship of Critical Temperature to Macromolecular
Synthesis and Growth Yield in Psychrobacter cryopegella. J. Bact. 186:2340-2345.
228.
Venter, J.C., K. Remington, J. Heidelberg, A. Halpern, D. Rusch, J. Eisen, D. Wu, I. Paulsen, K. Nealson,
W. Nelson, D. Fouts, S. Levy, A. Knap, M. Lomas, K. Nealson, et al. 2004. Environmental genomic shotgun
sequencing of the Sargasso Sea. Science 304:66-74.
229.
Takai, K., H. Oida, Y. Suzuki, H. Kirayama, S. Nakagawa, T. Nunora, F. Inagaki, K. H. Nealson, and K.
Horikoshi. 2004. Spatial distribution of marine Chrenarchaeota Group I in the vicinity of deep-sea
hydrothermal systems. Appl. Environ. Microbiol. 70:2403-2413.
230.
Suzuki, Y., F. Inagaki, K. Takai, K.H. Nealson, and K. Horikoshi. 2004. Microbial diversity in inactive
chimney structures from deep-sea hydrothermal systems. Microbio. Ecol. 47: 186-196.
231.
Kemner, K.M., S.D. Kelly, B. Lal, J. Maser, E. J. O’Loughlin, D. Sholto-Douglas, Z. Cai, M. Schneegurt,
C.F. Kulpa Jr., K.H. Nealson. 2004. Elemental and redox analysis of single bacterial cells by X-ray
microbeam analysis. Science 306:686-687.
232.
Johnson, C.M., B.L. Beard, E.E. Roden, D.K. Newman, and K.H. Nealson. 2004. Isotopic constraints on
Biogeochemical cycling of Fe. Rev. Mineral. Geochem. 55:359-408.
233.
Inagaki, F., U. Tsunogai, M. Suzuki, A. Kosaka, H. Machiyama, K. Takai, T. Nunoura, K.H. Nealson, and
K. Horikoshi. 2004. Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at
the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes.
Appl. Environ. Microbiol. 70:7445-7455.
234.
Meyer, T.E., A.I Tsapin, I. Vandenberghe, L. DeSmet, D. Frishman, K.H. Nealson, M.A. Cusanovich, and
J.J. VanBeeumen. 2004. Identification of 42 possible cytochrome C genes in the Shewanella oneidensis
genome and characterization of six soluble cytochromes. OMICS: J. Integr. Biol. 8:57-77
235.
Abboud, R., R. Popa, V. Souza-Egipsy, C.S. Giometti, S. Tollaksen, J.J. Mosher, R.H. Findlay, and K.H.
Nealson. 2005. Low-temperature growth of Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 71:811816.
236.
Kolker, E., A.F. Picone, M.Y. Galperin, M.F. Romine, R. Higdon, K.S. Makarova, N. Kolker, G.A.
Anderson, X. Qiu, K.J. Auberry, G. Babnigg, A.S. Beliaev, P. Edlefsen, D.A. Elias, Y. Gorby, T. Holzman, J.
Klappenback, K. T. Konstantinidis, M.L. Land, M.S. Lipton, L. McCue, M. Monroe, L. Pasa-Tolic, G. Pinchuk,
S. Purvine, M. Serres, S. Tsapin, B.A. Zakrajsek, W. Zhu, J. Zhou, F.W. Larimer, C. Lawrence, M. Riley, F.R.
Collart, J.R. Yates, III, R.D. Smith, C. Giometti, K. Nealson, J.K. Fredrickson, and J.M. Tiedje. 2005. Global
profiling of Shewanella oneidensis MR-1: Expression of hypothetical genes and improved functional
annotations. Proc. Nat. Acad. Sci. USA. 102:2099-2014.
237.
Nealson, K.H. 2005. Hydrogen and energy flow as “sensed” by molecular genetics. Proc. Nat. Acad. Sci.
USA 102: 3889-3890.
22
238.
Takai, K., C.L. Moyer, M. Miyazaki, Y. Nogi, H. Hirayama, K.H. Nealson, and K. Horikoshi. 2005.
Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine
mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc. Extremophiles
9:17-27.
239.
Inagaki, F., H. Okada, A.I. Tsapin, and K.H. Nealson. 2005. The Paleome: A sedimentary genetic record
of past microbial communities. Astrobiology. 5: 141-153.
240.
Hirayama, H., K. Takai, F. Inagaki, Y. Yamato, M. Suzuki, K.H. Nealson, and K. Horikoshi. 2005. Bacterial
community shift along a subsurface geothermal water stream in a Japanese gold mine. Extremophiles 9:169184.
241.
Kus, E., R. Abboud, R. Popa, K.H. Nealson, and F. Mansfeld. 2005. The concept of the bacterial battery.
Corrosion Sci. 47:1063-1069.
242.
Hirayama, H., K. Takai, F. Inagaki, K.H. Nealson, and K. Horikoshi. 2005. Thiobacter subterraneus gen.
nov., sp. nov., an obligately chemolithoautotrophic, thermophilic, sulfur-oxidizing bacterium from a subsurface
hot aquifer. Int. J. Syst. Evol. Microbiol. 55:467-472.
243.
Lanoil, B., M.T. LaDuc, M. Wright, M. Kastner, K.H. Nealson, and D. Bartlett. 2005. Archael diversity in
ODP legacy borehole 892b and associated seawater and sediments of the Cascadia Margin. FEMS Microbiol.
Ecol. 54: 167-177.
244.
Schelble, R.T., G.D. McDonald, J.A. Hall, and K.H. Nealson. 2005. Community structure comparison
using FAME analysis of desert varnish and soil, Mojave Desert, California. Geomicrobiol. J. 22:353-360.
245.
Nealson, K.H. and R. Popa. 2005. Metabolic diversity in the microbial world: relevance to exobiology.
In: SGM symposium. Vol. 65. pp. 1151-171. Micro-organisms and Earth systems – advances in
geomicrobiology. Ed. G.M. Gadd, K.T. Semple, and H.M. Lappin-Scott. Cambridge Univ. Press., Oxford, UK.
246.
Nealson, K.H., F. Inagaki, and K. Takai. 2005. Hydrogen-driven subsurface lithoautotrophic microbial
ecosystems (SLiMEs): do they exist and why should we care? Trends in Microbiol. 13:405-410.
247.
Beliaev, A.S., D.M.Stanek, J.A. Klappenbach, L. Wu, M.F. Romine, J.M. Tiedje, K.H. Nealson, J.K.
Fredrickson, and J. Zhou. 2005. Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to
different terminal electron acceptors. J. Bacteriol. 187:7138-7145.
248.
Nunoura, T., H. Hirayama, H. Takami, H. Oida, S. Nishi, S. Shimamura, Y. Suzuki, F. Inagaki, K. Takai, K.
H. Nealson, and K. Horikoshil 2005. Genetic and functional properties of uncultivated thermophilic
crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments. Environ.
Microbiol. 7:1967-1984
249.
Nealson, K.H. and R. Popa. 2005. Introduction and overview: what do we know for sure? Amer. J. Sci.
305:449-466.
250.
Lüttge, A., L. Zhang, and K.H. Nealson. 2005. Mineral surfaces and their implications for microbial
attachment: results from Monte Carlo Simulations and direct surface observations. Amer. J. Sci. 305:766790.
2006:
251.
Inagaki, F. and K.H. Nealson. 2006. The Paleome: Letters from ancient Earth. pp. 21-39. In: Past and
Present Water Column Anoxia. Ed: L.N. Neretin. Springer. Amsterdam.
252.
Inagaki, F., T. Nunoura, S. Nakagawa, A. Teske, M. Lever, A. Lauer, M. Suzuki, K. Takai, M. delwiche,
F.S. Colwell, K.H. Nealson, K. Horikoshi, S. D’Hondt, and B.B. Jorgensen. 2006. Biogeographical distribution
23
and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean margin.
Proc. Nat. Acad. Sci. USA 103:2815-2820.
253.
Chang, I.S., H. Moon, O. Bretschger, J.K. Jang, H.I. Park, K.H. Nealson, and B.H. Kim. 2006.
Electrochemically active bacteria (EAB) and mediator-less microbial fuel cells. J. Microbiol. Biotechnol.
16:163-177.
254.
Inagaki, F., and K.H. Nealson. 2006. Molecular signals from ancient materials: challenges to deepbiosphere and paleoenvironmental research – a response to the comments of Sinninghe Damste’ and
Coolen. Astrobiology 6:303-307.
255.
Suzuki, Y., S. Kojima, T. Sasaki, M. Suzuki, T. Utsumi, H. Watanabe, H. Urakawa, S. Tsuchida, T.
Nunoura, H. Hirayama, K. Takai, K.H. Nealson, and K. Horikoshi. 2006. Host-symbiont relationships in
hydrothermal vent gastropods of the genus Alviniconcha from the southwest Pacific. Appl. Environ. Microbiol.
72:1388-1393.
256.
Nealson, K.H. and J.W. Hastings. 2006. Quorum sensing on a global scale: massive numbers of
bioluminescent bacteria make milky seas. Appl. Environ. Microbiol. 72: 2295-2297
257.
Capone, D.B., R. Popa, B. Flood, and K.H. Nealson. 2006. Follow the nitrogen. Science 312:708-709.
258.
Gorby, Y., S. Yanina, J.S. McLean, K.M. Rosso, D. Moyles, A. Dohnalkova, T.J. Beveridge, I-S. Chang,
B-H. Kim, K-S. Kim, D.E. Culley, S.B. Reed, M.F. Romine, D.A. Saffarini, E.A. Hill, L. Shi, D.A. Elias, D.W.
Kennedy, G. Pinchuk, D. Watanabe, S. Ishii, B. Logan, K.H. Nealson, and J.K. Fredrickson. 2006. Electrically
conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms.
Proc. Nat. Acad. Sci. U.S.A. 103:11358-11363.
259.
Nealson, K.H. 2006. Lakes of liquid CO2 in the deep sea. Proc. Nat. Acad. Sci. USA. 103:13903-13904.
260.
Gao, H., A. Obraztsova, N. Stewart, R. Popa, J.K. Fredrickson, J.M. Tiedje, K.H. Nealson, and J. Zhou.
2006. Shewanella loihica sp. Nov., isolated from iron-rich microbial mats in the Pacific Ocean. Int. J. Syst.
Evol. Microbiol. 56: 1911-1916.
261.
Hagadorn, J.W., X. Xiaqo, P.C.J. Donoghue, S. Bengtson, N.J. Gostling, M. Pawlowskaq, E.C. Raff, R.A.
Raff, R. Turner, Y. Chongyu, C. Zhou, X. Yuan, M.B. McFeely, M. Stampanoni, and K. H. Nealson. 2006.
Cellular and Subcellular Structure of Neoproterozoic Animal Embryos. Science 314: 291-294.
262.
Nonura, T., H. Oida, N. Masui, F. Inagaki, K. Takai, S. Hirano, K.H. Nealson, and K. Horikoshi. 2006.
Culture-dependent and –independent analyses of subsurface microbial communities in oil-bearing strata of
the Sagara oil reservoir. Island Arc. 15: 328-337.
263.
Yang, X., Rodionov, D., C. Li, O.N. Laikova, M.S. Gelfand, O.P. Zagnitko, M.F. Romine, A.Y. Obraztsova,
K.H. Nealson, and A.L. Osterman. 2006. Comparative genomics and experimental characterization of Nacetylglucosamine utilization pathway of Shewanella oneidensis. J. Biol. Chem. 281(40):29872-29875.
2007:
264.
Rusch, D.B., Halpern, A.L., Heidelberg, K.B., Sutton, G., Williamson, S., Yooseph, S., Wu, D., Eisen, J.A.,
Hoffman, J.M., Howard, C.H., Foote, C., Dill, B.A., Remington, K., Beeson, K. Tran, B., Smith, H., BadenTillson, H., Stewart, C., Thorpe, J., Freemen, J., Andrews-Pfannkoch, C., SVenter, J.E., Li, K. Kravitz, S.,
Heidelberg, J.F., Utterback, T. Rogers, Y-H. Falcon, L.I., Souza, V., Bonilla-Rosso, G. Eguiarte, L.E., Karl,
D.M., Sathyendranath, S., Platt, T., Bermingham, E., Gallardo, V., Tamayo-Castillo, G., Ferrari, M.R.,
Strausberg, R.L., Nealson, K., Friedman, R., Frazier, M., and Venter, J.C. The Sorcerer II Global Ocean
24
Samplig Expedition: Northwest Atlantic through Eastern Tropical Pacific. PLoS
Biology5(3):e77.doi:10.1371/journal.pbio.0050077.
265.
Boldareva, E.N., I.A. Bryantseva, A. Tsapin, K. Nealson, D.Yu. Sorokin, T.P. Tourova, V.A. Boichenko,
I.N. Stadnichuk, and V.M. Gorlenko. 2007. The new alkaliphilic Bacteriochlorophyll a-containing bacterium
Roseinanatronobacter monicus sp. No. from the hypersaline soda Mono Lake (California, U.S.).
Microbiology. 76:82-92.
266.
Davis K.J., A. Lüttge, and K. H. Nealson. 2007. Calcite and dolomite dissolution rates in the context of
microbe-mineral surface interactions. Geobiology 5:191-205
267.
Rabaey, K., J. Rodriquez, L. Blackall, J. Keller, P. Gross, D. Batstone, W. Verstraete, and K. H. Nealson.
2007. Microbial eology meets electrochemistry: electricity-driven and driving communities. The ISME Journal
1:9-18.
268.
Nealson, K.H. and J.C. Venter. 2007. Metagenomics and the global ocean survey: what’s in it for us, and
why should we care. The ISME Journal 1:185-187.
269.
Popa, R., P.K. Weber, J. Pett-Ridge, J.A. Finzi, S.J. Fallon, I. D. Hutcheon, K.H. Nealson, and D.G.
Capone. 2007. Carbon and nitrogen fixation and metabolite exchange in and between individual cells of
Anabaena oscillarioides. The ISME Journal 1:354-360
270.
Bretschger, O., A. Obraztsova, C.A. Sturm, I.S. Chang, Y.A. Gorby, S.B. Reed, B.E. Culley, C.L.
Reardon, S. Barua, M.f. Romine, J. Zhou, A. A. Beliaev, R. Bouhenni, D. Saffarini, F. Mansfeld, B-H. Kim, J.K.
Fredrickson, and K.H. Nealson. 2007. Current production and metal oxide reduction by Shewanella
oneidensis MR-1 wild type and mutants. Appl. Environ. Microbiol. 73:7003-7012.
2008:
271.
Pinchuk, G.E., C. Ammons, D.E. Culley, S-M. W. Li, J.S. McLean, M.F. Romine, K.H. Nealson, J.K.
Fredrickson, and A. Beliaev. 2008. Utilization of DNA as a sole source of phosphorus, carbon, and energy by
Shewanella spp.: ecological and physiological implications for dissimilatory metal reduction. Appl. Environ.
Microbiol. 74:1198-1208.
272.
Manohar, A.K., O. Bretschger, K.H. Nealson, and F. Mansfeld. 2008. The polarization behavior of the
anode in a microbial fuel cell. Electrochem. Acta. 3508-3513.
273.
Nealson, K.H. 2008. A Korarchaeote yields to genome sequencing. Proc. Natl. Acad. Sci. USA 105:
8805-8806.
274.
Manohar, A.K., O. Bretschger, K.H. Nealson, and F. Mansfeld. 2008. The Use of Electrochemical
Impedance Spectroscopy (EIS) in the Evaluation of the Electrochemical Properties of a Microbial Fuel Cell.
Bioelectrochemistry 72:149 - 159.
275.
Kus, E., K. Nealson, and F. Mansfield. 2008. The effect of different exposure conditions on biofilm/copper
properties. Corrosion Science 49: 3421-3427
276.
Kus, E., K. Nealson, and F. Mansfeld. 2008. The bacterial battery and the effect of different exposure
conditions on biofilm properties. Electrochem. Acta. 54:47-52.
277.
Waters, M.S., C.A. Sturm, M.Y. El-Naggar, A. Luttge, F.E. Udwadia, D.G. Cvitkovitch, S.D. Goodman,
and K.H. Nealson. 2008. In search of the microbe/mineral interface: quantitative analysis of bacteria on metal
surface using vertical scanning Interferometry. Geobiology 6:254-262.
278.
Fredrickson, J.K., M.F. Romine, A.S. Beliaev, J.M. Auchtung, M.E. Driscoll, T.s. Gardner, K.H. Nealson,
A.L. Osterman, G. Pinchuk, J.L. Reed, D.A. Rodionov, J.L.M. Rodrigues, D.A. Saffarini, M. H. Serres, A.M.
25
Spormann, I.G. Zhulin, and J. M. Tiedje. 2008. Towards Environmental Systems Biology of Shewanella.
Nature Rev. Microbiol. 6:592-603
279.
El-Naggar, M., Y. A. Gorby, W. Xia, and K.H. Nealson. 2008. The Molecular Density of States in Bacterial
Nanowires., Biophys. J. 95:10-12.
280.
Borg, L.E., DesMarais, D.J., Beaty, D.W., Aharonson, O., Benner, S.A., Bogard, D.D., Bridges, J.C.,
Rudney, C.J., Calvin, W.M., Clark, B.C., Eigenbrode, J.L., Grady, M.M., Head, J.W., Hemming, S.R., Hinners,
N.W., Hipkin, V., MacPherson, G.J., Marinangeli, L., McLennan, S.M., McSween, H.Y., Moersch, J.E.,
Nealson, K.H., Pratt, L.M., Righter, K., Ruff, S.W., Shearer, C.K., Steele, A., Sumner, D.Y., Symes, S.J.,
Vago, J.L., and Westall, F. 2008. Science priorities for Mars sample return. Astrobiology 8:489-536.
281.
Bhartia, R., W.F. Hug, E.C. Salas, R.D. Reid, K. K. Sijapati, A. Tsapin, W. Abbey, P.G. Conrad, K.H.
Nealson, and A.L. Lane. 2008. Classification of Organic and Biological Materials with Deep UV Excitation.
Appl. Spectroscopy 62:1070-1077.
282.
Schelble, R.T., J.A. Hall, K.H. Nealson, and A. Steele. 2008. DNA perseverance of microorganisms
exposed to silica: an experimental study. Geobiology. 6:503-511.
283.
Biffinger, J.C., J. Pietron, O. Bretschger, L. J. Nadeau, G.R. Johnson, C.C. Williams, K.H. Nealson, and
B.R. Ringeisen. 2008. The influence of acidity on microbial fuel cells containing Shewanella oneidensis.
Biosensors and Bioelectronics 24:906-911.
2009:
284.
Waters, M.S., M.Y. El-Naggar, L. Hsu, C.A. Sturm, A. Luttge, F.E. Udwadia, D.G. Cvitkovitch, S.D.
Goodman, and K.H. Nealson. 2009. Simultaneous interferometric measurement of corrosive or
demineralizing bacteria and their mineral interfaces. Appl. Environ. Microbiol. 75:1445-1449.
285.
Nealson, K.H. and W. Berelson. 2009. Sediment habitats, including watery. Encyclopedia of
Microbiology. Pp 350-360. Oxford:Elsevier
286.
Finzi-Hart, J.A., J. Pett-Ridge, P.Weber, R. Popa, S.J. Fallon, T. Gunderson, I. Hutcheon, K. Nealson,
and D.G. Capone 2009. Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer
Secondary Ion Mass Spectrometry. Proc. Nat. Acad. Sci. U.S.A. 106:6345-6350
287.
Gao, H., Z.K. Yang, S. Barua, S. B. Reed, M.F. Romine, K.H. Nealson, J.K. Fredrickson, J.M. Tiedje, and
J. Zhou. 2009. Reduction of nitrate in Shewanella oneidensis depends on atypical NAP and NRF systems
with NapB as a preferred electron transport protein from CymA to NapA. The ISME J. 3:966-976.
288.
He, Z., J. Kan, Y. Wang, Y. Huang, F. Mansfeld, and K.H. Nealson. 2009. Electricity production coupled
to ammonium in a microbial fuel cell. Env. Sci. Technol. 43: 3391-3397.
289.
He, J., J. Kan, F. Mansfeld, L. Angenent, and K. Nealson. 2009. Self-sustained phototrophic microbial fuel
cells based on the synergistic cooperation between photosynthetic microorganisms and heterotrophic
bacteria. Envir. Sci. Technol. 43: 1648-1654.
290.
Biffinger, J.C, B. R. Ringeisen; M. Ribbens; S, Finkel; K. Nealson, and J. J. Pietron. 2009.
Characterization of electrochemically active bacteria (EAB) utilizing a high-throughput voltage-based
screening assay Biotechnology and Bioengineering 102: 436-444.
291.
Nealson, K.H. 2009. Taking the concept to the limit: uncultivable bacteria and astrobiology. Microbiol.
Monographs 10: 195-204.
26
292.
Popa, R., W. Fang, K.H. Nealson, V. S-Egipsy, T.S. Berquo, S.K. Banerjee, L.R. Penn. 2009. Effect of
oxidative stress on the growth of magnetic particles in Magnetospirillum magneticum. Internat. Microbiol. 12:
49-57.
293.
Namsaraev, Z., V. Akimov, E. Barinova, A. Tasapin, K. Nealson, and V. Gorlenko. 2009. Marinospirillum
celere sp. Nov., a novel alkaliphilic helical bacterium isolated from Mono Lake. Int. J. Syst. Environ. Microbiol.
59:2329 – 2332 (on line publication: doi: ijs.0.006825-0[pii])
294.
Prakash, G., F. Viva, O. Bretschger, B. Yang, M. Ell-Naggar, and K. Nealson. 2009. Inoculation
procedures and characterizationof membrane electrode assemblies for microbial fuel cells. J. Power Sources
(in press published on line: doi:10.1016/j.powsour.2009.06.081).
295.
Waters, M.S., E.C. Salas, S.d. Goodman, F.E. Udwadia, and K.H. Nealson. 2009. Early detection of
oxidized surfaces using Shewanella oneidensis MR-1 as a tool. Biofouling. 25:163-172.
296.
Schubbe, S., T. J. Williams, G. Xie, H. E. Kiss, T.S. Brettin, D. Martinez, C.A. Ross, D. Schuler, B. L. Cox,
K.H. Nealson, and D.A. Bazylinski. 2009. Complete genome sequence of the chemolithoautotrophic marine
magnetotactic coccus strain MC-1. Appl. Envion. Microbiol. 75: 4835-4852.
297.
Konstantinidis, K., et al. 2009. Comparative systems biology across an evolutionary gradient within the
Shewanella genus. Proc. Nat. Acad. Sci. USA 106: 15909-15914.
298.
Jang, J.K., I.S. Chang, H.Y. Hwang, Y.F. Choo, J. Lee, K.S. Cho, B.H. Kim, and K.H. Nealson. 2009.
Electricity generation coupled to oxidation of propionate in a microbial fuel cell. Biotechnol. Lett. (in press)
299.
Harris, H.W., M.Y. El-Naggar, O. Bretschger, M.J. Ward, D.A. Saffarini, M. F. Romine, A.Y. Obraztsova,
and K.H. Nealson. 2008. Electrokinesis is a microbiall behavior that requires extracellular electron transport.
Proc. Nat. Acad. Sci. (in press)
300.
Karpinets, T.V. et al. 2009. Conserved synteny at the protein family level reveals genes underlying
Shewanella species’ cold tolerance and predicts their novel phenotypes. Funct. Integr. Genomics (in press)
27