Timothy Shipley, PhD In-house Editor BMC Gastroenterology 14 February 2012 Dear Dr Shipley, Re: Manuscript reference number 1652596493527337 Please find attached our revised manuscript entitled “Efficacy of omeprazole, famotidine, mosapride and teprenone in patients with upper gastrointestinal symptoms: an omeprazole-controlled randomized study (J-FOCUS),” in which we have taken into account the additional comments provided by the reviewers. We wish to thank you and the reviewers for taking the time to re-review our manuscript. The comments were particularly insightful and have helped us to improve our manuscript. Our responses to individual comments are summarized below. The revisions to the text are indicated with yellow highlighting in the manuscript and by page and line numbers in our point-by-point responses below. Please address all correspondence to: Kouichi Sakurai, MD Department of Gastroenterology and Hepatology, Graduate School of Medical Sciences, Kumamoto University 1-1-1 Honjo, Kumamoto 860-8556, Japan Tel: +81-96-373-5149 Fax: +81-96-371-0582 E-mail: sakurai@s3.kcn-tv.ne.jp We hope that the revised manuscript is now acceptable for publication in BMC Gastroenterology. We look forward to hearing from you in due course. Yours sincerely, Kouichi Sakurai, MD Responses to the peer reviewers’ comments Reviewer: Grigorios Leontiadis The authors have addressed adequately point #6 and point #8 adequately. With regards to point #5, I still believe that the use of urine antibody test was inappropriate, but it is not worth engaging in further exchange of arguments. My understanding is that my thoughts will be published alongside the article. The final decision rests with the Editors. I am confident that future readers will be able to see that future guidelines will not propose this test for clinical use, let alone for selection of participants in clinical trials. For the time being, a reasonable compromise that will protect the reputation of BMC Gastroenterology, would be to re-phrase the wording as follows: “First, we used a urine antibody test to screen patients for evidence of H. pylori infection. Although this test shows high sensitivity and accuracy specificity, it is has not been recommended by guidelines as a screening test as yet. It is possible that some patients without H. pylori infection were included in this study.” Response: Thank you for your comment. In accordance with the outstanding concerns, we have amended the paragraph as follows: “First, we used a urine antibody test to screen patients for evidence of H. pylori infection. Although this test shows high sensitivity and accuracy, it has not yet been recommended by guidelines as a screening test. It is therefore possible that some patients with H. pylori infection were included in this study.” (Page 19, Lines 442–446).