EXPERIMENT 5 POLYACRYLAMIDE GEL DISC ELECTROPHORESIS OF SERUM LIPOPROTEIN PRINCIPLE Dye the serum lipoprotein with the Sudan black B propanediol in advance, and add it in the polyacrylamide gel electrophoresis(PAGE) column to migrate. Because of molecular sieving effect, PAGE has high resolution and can separate every constituent of the serum lipoprotein clearly. PROCEDURE 1. Gel preparation: Insert several 0.5×7.5 cm clean glass tubes on the rubber seat perpendicularly to prepare gel. Take out the following reagents from the refrigerator. Balance in the room temperature and then add them in a small triangle bottle one by one: 20% monomer solution 2.0ml Tris—EDTA-Na2 buffer 1.2ml Distilled water 6.6 ml TEMED(tetramethyl ethylenediamine) 0.01ml 10% ammonium persulfate solution 0.15ml (After adding in ammonium persulfate and mix lightly, the reagents begin to polymerize. Therefore, the column filling should be finished within 5 minutes.) 2. The column filling: Draw the above-mentioned mixture rapidly by a dropper and inject it into the glass tube along the tube wall, each tube 0.8~1.0ml. Then, add in distilled water slowly by a dropper along the tube wall, approximately 0.5cm high, to isolate the oxygen. Put the column in room temperature for 30 minutes. The clear interface appearing between the gel surface and the water indicates the gel polymerization has completed. Pour away the water and absorb the residual water on the gel surface gently with filter paper strips. Pay attention not to damage the gel surface that has already polymerized. 3. Sample preparation and adding: Take 0.2ml serum and add in 0.02ml Sudan black B propanediol solution and 0.02ml 25% sucrose solution. Mix them up. Settle the mixure at room temperature for 45 minutes. Centrifuge it 5 min at 2000 rpm. Take 30μl dyed serum. Add it on the gel surface and then top up electrophoresis buffer slowly along the tube wall. 4. Electrophoresis: Take down the tube from the rubber seat and insert it in the hole of the electrophoresis chamber tightly to avoid leaking. The tube must be 1 vertical. Fill electrophoresis buffer into the upper and lower chambers separately. The upper chamber connects the cathode and the lower chamber connects the anode. Let electric current be 2 ~ 5 mA per tube. When the first band is about 1cm away from the tube bottom, the electrophoresis can be stopped. It takes about 20 ~ 30 minutes. 5. Gel peeling: Pour the upper chamber buffer (put in another bottle), and take down the tube. Take a 2ml syringe with a long needle (about 10cm), and fill it with distilled water. Between the tube wall and the gel, insert the needle along the wall carefully, rotate the tube and inject the distilled water at the same time. With the pressure and lubrication of water, the gel column leaves the tube. If necessary, after the needle peeling, the gel column can be blown out slowly by an ear wadhing bulb. 6. Observation and drawing: Observe the shade of colour, width and order of the bands and record them. QUESTIONS 1. Which bands may appear in the electrophoresis of normal limosis serum lipoprotein? Compare this electrophoretogram with that of agarose electrophoresis of serum lipoprotein and explain the difference. 2. Is each lipoprotein band separated into uniform by electrophoresis? Why? REAGENTS [1] Tetramethyl ethylenediamine (TEMED) [2] 10% ammonium persulfate solution: Make 0.5 g ammonium persulfate dissolved in some distilled water and add in distilled water again to 5 ml. Preserve in the refrigerator and the storage time can't exceed one week. It’s better to prepare before using. [3] 25% sucrose solution: Make 12.5 g sucrose dissolved in 50 ml distilled water. [4] 0.5mol/L Tris - 0.04mol/L EDTA - Na2 buffer: Dissolve and dilute 6.057 g Tris(hydroxymethyl)aminomethane and 1.17 g EDTA - Na2 to 100 ml with distilled water, modulate pH to be 8.8. Place the solution in the brown bottle and keep it in the refrigerator. [5] Take 19.6g acrylamide (Acr) and 0.4 g bis-acrylamide (Bis), and dilute to 100 ml after dissolve them with distilled water. (Dissolve Bis first and then add in Acr. After fixing the capacity, filtrate the solution to remove the insoluble matters.) [6] The electrophoresis buffer: One may select any kind of buffers below. (1) 0.025 mol/L boric acid—borax buffer: pH 9.0. Take 90ml 0.4 mol/L boric acid—borax buffer, and add distilled water to 1440ml. This buffer is quite suitable. The method to prepare 0.4 mol/L boric acid—borax buffer: Take 30.512 g borax and 4.948 g boric acid, dissolve them in distilled water, and dilute them to 2 1000 ml. (2) The barbital buffer: pH8.6 I=0.075. Take 15.458 g barbital sodium and 2.768 g barbital, dissolve them in 300 ~ 400m1 distilled water and add distilled water to 1000ml. (3) Tris—glycine buffer: Take 6.0g Tris and 28.8 g glycine, dissolve them in about 850 ml distilled water, adjust pH to 8.3 with Tris or glycine, add distilled water again to 1000 ml and keep it in the refrigerator. The cost of this buffer is high. [7] Sudan black B propanediol solution: Heat up 20ml propanediol to 100~110℃, add in 0.2g sudan black B, stir solution for 5 minutes, and filtrate it with No3 Xinhua filter paper while solution is hot. Keep this solution in the dark place and it can stabilize at least for one month. 3