Curriculum Vitae_February 2013 BRITT AUBREY JOHNSON, Ph.D., FACMG Assistant Laboratory Director Clinical Biochemical Genetics Diagnostic Laboratory University of Miami Miller School of Medicine Dr John T. MacDonald Foundation Department of Human Genetics 1601 NW 12th Avenue (D820) MCCD Room 6006A Miami, FL 33136 W:(305) 243-5450 BJohnson@med.miami.edu BOARD CERTIFICATIONS American Board of Medical Genetics American Association of Bioanalysts Clinical Molecular Genetics Medical Technologist CLINICAL LICENSES State of Florida Director’s License in Molecular Pathology DI44281 State of Florida Supervisor’s License in Clinical Chemistry DI44281 EDUCATION Fellowship Clinical Biochemical Genetics, University of Miami, Miami FL Fellowship Clinical Molecular Genetics, University of California San Francisco, CA Postdoctorate Neurology, University of California San Francisco, CA Ph.D. Genetics, University of Wisconsin-Madison, Madison WI B.S. Genetics, University of Georgia, Athens GA 2011 to 2012 2009 to 2011 2008 to 2011 2008 2003 RESEARCH EXPERIENCE 2008-2011 Postdoctoral Fellow, Department of Neurology, University of California San Francisco Advisors: Jorge Oksenberg, PhD and Sergio Baranzini, PhD Project: Tested candidate genes, previously identified as multiple sclerosis susceptibility genes in individuals of Northern European descent, in a large dataset of African Americans. CD6, CLEC16A, EVI5, GPC5, and TYK2 contained SNPs associated with the disease in African Americans. In addition, RGS1 is associated with age of onset and TNFRSF1A is associated with disease progression. We are performing high coverage re-sequencing of all validated disease genes in African Americans and northern Europeans (affecteds and controls). High coverage re-sequencing will allow us to identify rare variants that may contribute to MS susceptibility in African Americans. Project: MicroRNAs (miRNAs) are short RNAs which modify the expression of genes in a sequence specific manner. Abnormal expression of miRNA has been associated with mental retardation, the degeneration of neurons, and even BRITT AUBREY JOHNSON, PhD, FACMG 2 autoimmune disease. However, the relationship between miRNA expression and Multiple sclerosis (MS) has not been studied. The purpose of this project is to investigate patterns of miRNA expression in immune cells from early MS patients to search for anomalies that can be associated with a patient’s rate of progression. 2003-2008 Ph.D. Dissertator, Department of Genetics, University of Wisconsin-Madison Advisor: Akihiro Ikeda, DVM, PhD Thesis Project: Identified the mutated gene, Rs1, responsible for retinal phenotypes in 44TNJ mice and characterized the effect of this mutation on retinal synapses. This work demonstrated that Rs1 mutant mice are a good model for human X-linked retinoschisis. Mapped and characterized the effects of a major QTL that completely rescues the retinal phenotypes in Rs1 mutant mice. Investigating the relationship between Retinoschisin (RS1) and type II Collagen (COL21) in the retina. Project: Characterized the retinal synapses in Cacna1f mutant mice. These mice have a spontaneous mutation in the calcium channel at the photoreceptor synapse that is responsible for neurotransmitter release. The human homologue, when mutated, is responsible for X-linked congenital stationary night blindness. 2001-2003 Undergraduate Researcher, Department of Genetics, University of Georgia Advisor: Janet Westpheling, PhD Project: Investigated the use of transduction in Streptomyces as a means of combinatorial biosynthesis ACADEMIC AND PROFESSIONAL HONORS 2012-present Active Candidate Status and Board Eligible for the American Board of Medical Genetics in Clinical Biochemical Genetics 2011-present Fellow of the American College of Medical Genetics 2011-present Diplomat of the American Board of Medical Genetics in Clinical Molecular Genetics 2009-2011 NIH Ruth L. Kirschstein Training Program in Medical Genetics May 2006 ARVO Foundation/Retina Research Foundation/Joseph M. and Eula C. Lawrence Travel Scholarship 2003-2005 NIH Predoctoral Training Program in Genetics 2002 Center for Undergraduate Research Opportunities Summer Fellowship PUBLICATIONS Johnson BA, Mascher H, Mascher D, Legnini E, Hung CY, Dajnoki A, Chien Y, Maródi L, Hwu W, Bodamer OA. Analysis of lyso-globotriaosylsphingosine (lyso-Gb3) in dried blood spots. In press. Bodamer OA, Johnson BA, Dajnoki A. Diagnosing lysosomal storage disorders: Fabry Disease. Current Protocols. In press. Legnini E, Orsini JJ, Müehl A, Johnson BA, Dajnoki A, Bodamer OA. Analysis of AcidSphingomyelinase activity in dried blood spots using tandem mass spectrometry. Ann Lab Med. In press. McElroy, J, Johnson BA, Oksenberg JR. Copy Number Variation in Pediatric Multiple BRITT AUBREY JOHNSON, PhD, FACMG 3 Sclerosis. Mult Scler. Epub Dec 13 [Epub ahead of print] Johnson BA, Oksenberg JR. The role of genetics in multiple sclerosis, in D Valle et al (eds): Scriver’s OMMBID, New York, McGraw-Hill, http://www.ommbid.com, in press. Gourraud PA, McElroy JP, Caillier SJ, Johnson BA, Santaniello A, Hauser SL, Oksenberg JR. 2011. Aggregation of multiple sclerosis genetic risk variants in multiple and single case families. Ann Neurol. 69(1):65-74. Johnson BA, Cole BS, Geisert EE, Ikeda S, Ikeda A. 2010. Tyrosinase is the modifier of Retinoschisis in mice. Genetics. 186(4): 1337-1344. Epub 2010 Sept 27 Johnson BA, Wang J, Taylor E, Caillier SJ, Herbert J, Khan OA, Cross AH, De Jager PL, Gourraud PA, Cree BC, Hauser SL, Oksenberg JR. 2010. Multiple sclerosis susceptibility alleles in African Americans. Genes Immun. (4):343-50. Epub 2009 Oct 29. Johnson BA, Aoyama N, Friedell NH, Ikeda S, Ikeda A. 2008. Genetic Modification of the Schisis Phenotype in a Mouse Model of X-Linked Retinoschisis. Genetics. 178:17851794. Hirasawa M, Xu X, Trask R, Maddatu TP, Johnson BA, Naggert JK, Nishina PM, Ikeda A. 2007. Carbonic Anhydrase Related Protein 8 Mutation Results in Aberrant Synaptic Morphology and Excitatory Synaptic Function in the Cerebellum. Mol Cell Neurosci. 35:161-170 Johnson BA, Ikeda S, Pinto LH, Ikeda A. 2006. Reduced synaptic vesicle density and aberrant synaptic localization caused by a splice site mutation in the Rs1h gene. Vis Neurosci. 23:887-898. Chang B, Heckenlively JR, Bayley PR, Brecha NC, Davisson MT, Hawes NL, Hirano AA, Hurd RE, Ikeda A, Johnson BA, Mccall MA, Morgans CW, Nusinowitz S, Peachey NS, Rice DS, Vessey KA, Gregg RG. 2006. The nob2 mouse, a null mutation in Cacna1f: Anatomical and functional abnormalities in the outer retina and their consequences on ganglion cell visual responses. Vis Neurosci. 23:1-14. PRESENTATION Johnson BA, Aoyama N, Ikeda S, Ikeda A. “Genetic Modification of the Schisis Phenotype in a Mouse Model of X-Linked Retinoschisis.” The Association for Research in Vision and Ophthalmology Conference, Ft. Lauderdale, FL, USA, presentation number 4035, May 2008 ABSTRACTS Johnson BA, Mascher H, Mascher D, Hung CY, Chien Y, Bodamer OA. Analysis of lysoglobotriaosylsphingosine (lyso-Gb3) for the diagnosis of Fabry disease in dried blood spots. The Society for Inherited Metabolic Disorders Conference, Charlotte, NC, USA, March 2012. Johnson BA, Legnini E, Orsini JJ, Muehl A, Dajnoki A, Bodamer OA. Analysis of AcidSphingomyelinase Activity in Dried Blood Spots Using Tandem Mass Spectrometry. The Society for Inherited Metabolic Disorders Conference, Charlotte, NC, USA, March 2012. BRITT AUBREY JOHNSON, PhD, FACMG 4 Johnson BA, Gourraud PA, Oksenberg JR. “Analysis of MS Susceptibility in African Americans. Beyond Replication.” The International Congress of Neuroimmunology, Sitges, Spain, October 2010. Ikeda A, Johnson BA, Aoyama N, Ikeda S. “Microarray Analysis of Gene Expression Changes During Improvement of Schisis in Rs1tmgc1 Mice.” The Association for Research in Vision and Ophthalmology Conference, Ft. Lauderdale, FL, USA, May 2009 Johnson BA, Ikeda S, Ikeda A. “A Major Genetic Modifier that Affects Schisis and Layer Disorganization Caused by the Rs1h Mutation in Mice.” ARVO Summer Eye Research Conference: New Frontiers in Retinal Diseases: Linking Genetics to Molecular Pathways and Therapeutic Strategies, Monterey, CA, USA, August 2007 Johnson BA, Ikeda S, Ikeda A. “Identification of a major QTL, which modifies the schisis and layer disorganization phenotypes in Rs1htmgc1 mice.” The Association for Research in Vision and Ophthalmology Conference, Ft. Lauderdale, FL, USA, May 2007 Johnson BA, Ikeda S, Pinto LH, Ikeda A. “Aberrant Synaptic Localization and Schisis Caused by a Splice-Site Mutation in the Rs1h Gene.” The Association for Research in Vision and Ophthalmology Conference, Ft. Lauderdale, FL, USA, May 2006 Johnson BA, Ikeda S, Pinto LH, Ikeda A. “Functional and structural synaptic abnormalities in ENU-induced 44TNJ mutant mice.” FASEB Summer Research Conference: The Biology and Chemistry of Vision, Phoenix, AZ, June 2005 Johnson BA, Ikeda S, Pinto LH, Ikeda A. “Synaptic Abnormalities in 44TNJ mice.” The Association for Research in Vision and Ophthalmology Conference, Ft. Lauderdale, FL, USA, May 2005 Johnson BA, Ikeda S, Pinto LH, Ikeda A. “Novel Mutation Causes Synaptic Abnormalities In the Retina” The Laboratory Mouse in Vision Research, Bar Harbor, Maine, USA, October 2004 SCIENTIFIC TECHNIQUES Genetic: gene mapping, positional cloning, mammalian congenic strain production, QTL analysis, linkage mapping, association mapping, analysis of rare variants Molecular: nucleic acid isolation and purification, gel electrophoresis, PCR, reverse transcription, quantitative real time PCR, sequencing, cloning, southern blot, reverse dot blot, nanodrop quantitation, and bioanalyzer analysis of RNA Biochemical: gas chromatography/mass spectrometry, high performance liquid chromatography/ tandem mass spectrometry, ion exchange chromatography, western blot, co-immunoprecipitation, protein purification, enzyme analysis Cell Biology: Hematoxylin and Eosin staining, immunohistochemistry with fluorescent probes on paraffin and cryosections, paraffin and ultra-microtomy, electron microscopy specimen preparation and staining, flow cytometry, laser capture microdissection Imaging and Microscopy: brightfield, epifluorescence, confocal, and transmission electron microscope experience Tissue Culture: experience with mammalian and human cell culture lines, basic adherent and suspension cell culture techniques, transient transfection, nucleofection, and immunocytochemistry BRITT AUBREY JOHNSON, PhD, FACMG 5 Software: experience using both Mac and PC. Adobe Photoshop, Adobe Illustrator, End Note, Mac Vector, Map Manager, Microsoft Office suite of programs, Prism, R statistical software. TEACHING EXPERIENCE Fall 2012 Inborn Errors of Metabolism Lecture Series Spring 2010 Medical Genetics for Genetic counseling students. Guest lecture: Cystic Fibrosis and Risk Analysis. University of California San Francisco. Spring 2005 Genetics 466: General Genetics. Duties: Taught 1 discussion section per week, proctored and graded exams, attended lectures, held weekly office hours, led optional exam review sessions. University of Wisconsin-Madison COMMITTEE MEMBERSHIP 2006/2007 Genetics Department Graduate Admissions Committee Member, University of Wisconsin-Madison PROFESSIONAL SOCIETIES 2012 -present The American Association of Bioanalysts 2011 -present The American College of Medical Genetics Fellow Member 2011 The American College of Medical Genetics Trainee Member 2010 The American Association of Immunologists 2005-2008 The Association for Research in Vision and Ophthalmology REFERENCES Available upon request