Institutional Biosafety Committee Application for Approval of Research or Instructional Activities Involving Recombinant DNA or Other Biohazardous Materials This application should be submitted to the Butler University Institutional Biosafety Committee c/o the Institute for Research and Scholarship, Jordan Hall 109D, 317-940-6424. Primary Investigator E-mail address Phone number Office Department/College Title of Research In what room(s) do you plan to work with, store or dispose of recombinant DNA? (Example: GH 48 sterile transfer of recombinant bacteria; GH 40 - cloning procedures; GH 10 - autoclaving of wastes; GH 42 - storage of recombinant cell lines) What vector(s) do you plan to use? Give the class, vector name, and vendor or other source. (Examples: plasmid pSE280, Invitrogen, lambda phage, Ziplox, Promega) What gene(s) do you plan to use? Be sure to include the source organism. (Examples: mouse androgen binding protein, cDNA library from spinach roots, Chlamydomonas reinhardii, small subunit of ribulose-1,5-bis-phosphate carboxylase/oxygenase) What host organism(s) do you plan to use? (Examples: Escherichia coli Y 1089 (r-); armyworm cell culture; Arabidopsis thaliana plants.) Project description Attach a brief description of how you plan to use the recombinant genes. State whether this activity will be used in an instructional manner (for a class) and/or for research purposes. Also include a brief description of how accidents involving the rDNA material and/or vector host organisms will be handled (such as applying bleach to the benchtop area of a small spill) (Example description: In order to study subcellular targeting of pyruvate decarboxylase PDC2 in tobacco, I will make a fusion between the cauliflower mosaic virus 35S promoter, the Arabidopsis thaliana pyruvate decarboxylase PDC2 coding sequence, and a blue-shifted green fluorescent protein gene. Initial cloning steps will be carried out in vector pBluescript using host Escherichia coli XL1-Blue (Stratagene), and selection on ampicillin. The gene fusion will be pasted into shuttle vector pGA748, and this construct will be electroporated into Agrobacterium tumefaciens LBA4404. Agrobacterium clones selected on kanamycin will be used for tobacco leaf disk transformation. The distribution of green fluorescent protein in transformed tobacco callus cells will be examined by fluorescence microscopy. Any spillage containing E. coli or Agrobacteria will be soaked into paper towels, which will be added to other accumulated biohazardous waste in labeled red bags and decontaminated via autoclaving; the surface(s) exposed to the spill will be treated with bleach.) 1 Revised 9/2015 Institutional Biosafety Committee Application for Approval of Research or Instructional Activities Involving Recombinant DNA or Other Biohazardous Materials Safety assessment and signatures Safety Precautions for Laboratories using recombinant DNA (rDNA) Laboratory Access Only authorized persons may enter the laboratory. An authorized person must understand the safety precautions of a recombinant DNA laboratory or be accompanied by one who does. Laboratory doors should be kept closed and locked except when a laboratory worker is present. All entrances to the laboratory from the hallway should be marked with contact information regarding the faculty member(s) in charge for the use of emergency personnel Protective clothing Goggles or safety glasses should be worn in the laboratory by all personnel at all times. Closed Toe Footwear should be worn in the laboratory by all personnel at all times. No sandals, flipflops, etc. Laboratory coats should be worn in the laboratory whenever rDNA work is being done. Do not wear these coats into areas in which food or drink may be consumed. Isolate them in a plastic bag when taking them to the laundry. Disposable gloves must be worn when handling microorganisms or nucleic acids. Change gloves immediately after obvious contamination or tears. Do not leave the laboratory and handle door-knobs, etc. while still wearing gloves. Wash your hands before leaving. Goggles or safety glasses with a UV-protective coating are required whenever gels are observed on an ultraviolet transilluminator. Both goggles AND a face shield are required for longer exposures, such as cutting out bands. Eye damage and serious facial “sunburn” may result if these precautions are ignored. Masks should be worn when weighing out or cleaning up dangerous powders such as ethidium bromide, acrylamide and SDS. Always read labels before handling chemicals. Laboratory behavior Food, drink, gum-chewing, smoking, and application of cosmetics is prohibited in the laboratory. No food or drink may be stored in refrigerators or elsewhere in the laboratory. Mouth pipetting is prohibited. Work Surfaces and Spills Bench surfaces and microcentrifuges must be disinfected with a suitable agent (such as 70% ethanol, Lysol, or bleach) after use and after any spill of viable material. An absorbent lab mat may be used on areas in which spills are possible; place any contaminated lab mat in the autoclave buckets. Spills of microorganisms should be cleaned by absorption into paper towels followed by disinfection of the surface with a suitable agent. Place all soiled paper towels and gloves used during spill clean-up into autoclave buckets. If a spill is too large for simple clean-up, such as a broken culture flask, leave a warning sign and contact the laboratory supervisor. Contaminated clothing should be removed and replaced with emergency scrubs kept in the laboratory. Use the bag from the scrubs to store clothing until it can be laundered (with bleach) or disposed. If material gets on skin, wash skin thoroughly with soap and water. If material gets in the eyes, rinse for fifteen minutes with saline solution or eye wash. Contact laboratory supervisor. Waste disposal Solid wastes contaminated by microorganisms or rDNA, including used gloves, pipette tips, Petri dishes, and paper products, must be placed in an autoclave bucket lined with paper towels or in an autoclavable biohazard waste bag. These wastes should be autoclaved at the P6 setting. Autoclavable bags should be placed in a bucket or tray for autoclaving. After autoclaving, solid wastes should be transferred to the green bin in GH10 for disposal. The bin is marked “Autoclaved Solid Wastes”. Liquid cultures in containers less than 250 ml/container should be decontaminated by autoclaving at P5 or P6. Liquid cultures in containers 250 ml and up must be autoclaved at P6. Alternatively, small 2 Revised 9/2015 Institutional Biosafety Committee Application for Approval of Research or Instructional Activities Involving Recombinant DNA or Other Biohazardous Materials quantities of liquid culture may be decontaminated by addition of one volume of bleach followed by soaking overnight. Decontaminated liquid waste may be washed down the drain. Sharps such as scalpel blades and glass waste must be placed in a sharps container. Chemical wastes must be placed in appropriate waste containers. Liquid wastes should be segregated as either aqueous, halogenic organic (like chloroform), or flammable organic waste. Solid wastes should be segregated as hazardous or non-hazardous. Gels containing ethidium bromide or similar mutagens should be placed in a labeled plastic bag and allowed to dry. Buffers containing ethidium bromide or similar mutagens should be passed through a sealed charcoal filter. Used filters and dried gels can be submitted to the Environmental Programs Office (X6408) as hazardous wastes. Safety: I have read and understood the precautions detailed in the Butler University policy on “Safety Precautions for Laboratories Using Recombinant DNA.” This project requires no precautions beyond those detailed in the Butler University policy on “Safety precautions for laboratories using recombinant DNA.” I have read, understood, and will follow the guidelines in the policy document. In order to minimize health and/or environmental risk factors specific to this project, I will take precautions in addition to those in the Butler University policy document. A discussion of the project-specific risks and precautions is attached. This project does not require all of the precautions in the policy document. An explanation of any adjustments to the standard precautions is attached. Student Involvement: I will be supervising student research on this project. I will train any student involved in this work such that they understand how to comply with the Butler University policy on “Safety precautions for laboratories using recombinant DNA.” Each student working on this project will submit a signed (by both the student and myself) "Institutional Biosafety Committee's Qualifications Form for Student Investigators" form to the University Research Programs Office I will NOT be supervising student research on this project. Maintaining Compliance: I will report to the IBC any change in personnel (particularly students) working on this project. I will report to the IBC any change in the class of vector used. (such as switching from a plasmid vector to a viral vector) I will report to the IBC any change in the source organism(s) used in this project. I will report to the IBC any change in the host organism(s) used in this project. Signature of Primary Investigator Date 3 Revised 9/2015 Institutional Biosafety Committee Application for Approval of Research or Instructional Activities Involving Recombinant DNA or Other Biohazardous Materials IBC Action: □ Project approved as presented. □ Project approved with modifications. □ Additional information requested. □ Approval denied. Signature of BIRS Director_ Date Signature of IBC Chairperson_ Date 4 Revised 9/2015