Unit 3 Syllabus: Evolution 2015 Chapters 22 – 26 Date Friday October 16 Class Discussion Topic/Activity Learning Targets SIP Day – End of 1st Quarter AP Lab 10 – data collection Intro to Evolution Monday October 19 Begin AP Lab 1 – plant Fast Plants History of Life Webquest Chapter 4: Carbon & the Molecular Diversity of Life (section 4.1 only) Chapter 25: The History of Life on Earth (sections 25.1-25.5) 1. I can explain how scientific evidence of biological evolution uses information from geographical, geological, physical, chemical and mathematical applications. a. I can explain how geological evidence provides support for models of the origin of life on Earth. i. Earth formed approximately 4.6 billion years ago (bya), and the environment was too hostile for life until 3.9 bya, while the earliest fossil evidence for life dates to 3.5 bya. Taken together, this evidence provides a plausible range of dates when the origin of life could have occurred. b. I can explain how chemical experiments have shown that it is possible to form complex organic molecules from inorganic molecules in the absence of life. 2. I can explain that there are several hypotheses about the natural origin of life on Earth, each with supporting scientific evidence. a. Primitive Earth provided inorganic precursors from which organic molecules could have been synthesized due to the presence of available free energy and the absence of a significant quantity of oxygen. b. In turn, these molecules served as monomers or building blocks for the formation of more complex molecules, including amino acids and nucleotides. c. The joining of these monomers produced polymers with the ability to replicate, store and transfer information. d. These complex reaction sets could have occurred in solution (organic soup model) or as reactions on solid reactive surfaces. e. The RNA World hypothesis proposes that RNA could have been the earliest genetic material. 3. I can explain how structural evidence supports the relatedness of all eukaryotes. a. Membrane-bound organelles (mitochondria and/or chloroplasts) 4. I can explain how molecular, morphological and genetic information of existing and extinct organisms add to our understanding of evolution. a. Fossils can be dated by a variety of methods that provide evidence for evolution. These include the age of the rocks where a fossil is found, the rate of decay of isotopes including carbon-14, the relationships within phylogenetic trees, and the mathematical calculations that take into account information from chemical properties and/or geographical data. 5. I can explain speciation and extinction have occurred throughout Earth’s history and that species extinction rates are rapid at times of ecological stress, such as the five major extinctions. Assignment (Unless otherwise noted assignments are due the next day class meets) Actively read, take notes chapter 25 Watch Videos: o The origin of Life o Abiogenesis Chapter 25 one-pager due tomorrow Watch video: o Crash course: Evolutionary Development Tuesday October 20 Artificial Selection Wednesday October 21 Darwin & Natural Selection Chapter 22: Descent with Modification (sections 22.2-22.3 only) 1. I can explain how, according to Darwin’s theory of natural selection, competition for limited resources results in differential survival. Individuals with more favorable phenotypes are more likely to survive and produce more offspring, thus passing traits to subsequent generations. 2. I can explain how morphological homologies represent features shared by common ancestry. Vestigial structures are remnants of functional structures, which can be compared to fossils and provide evidence for evolution. 3. I can explain how evolutionary fitness is measured by reproductive success. 4. I can explain how phenotypic variations are not directed by the environment but occur through random changes in the DNA and through new gene combinations. 5. I can explain that an adaptation is a genetic variation that is favored by selection and is manifested as a trait that provides an advantage to an organism in a particular environment. 6. I can explain how environments change and act as selective mechanism on populations, such as: a. Peppered moths b. Rock pocket mice 7. I can explain how changes in genotype may affect phenotypes that are subject to natural selection. Genetic changes that enhance survival and reproduction can be selected by environmental conditions, such as: a. Antibiotic resistance mutations b. Pesticide resistance mutations c. Sickle cell disorder and heterozygous advantage 8. I can explain how selection results in evolutionary change. 9. I can explain how humans impact variation in other species, such as: a. Artificial selection b. Drug-resistant bacteria Watch videos: o Natural selection 1 o Natural selection 2 o Crash Course Natural Selection Watch Videos: o Crash course evolution o Evidence for evolution Chapter 22 one-pager due tomorrow Mastering Biology quiz – chapter 22 Natural Selection – HHMI Rock Pocket Mouse Thursday October 22 Friday October 23 Monday October 26 (Fast Plants Data) Natural Selection Simulation Quiz – chapter 22, 25 AP Lab 10 – data collection Other Evidence for Evolution (homology, analogy, vestigial structures) (Fast Plants Data) Allele Freq./HWE HWE practice Chapter 23: The Evolution of Populations 1. I can explain how genetic variation and mutation play roles in natural selection. A diverse gene pool is important for the survival of a species in a changing environment. 2. I can explain that environments can be more or less stable or fluctuating, and this affects evolutionary rate and direction; different genetic variations can be selected in each generation. 3. I can explain that in addition to natural selection, chance and random events can influence the evolutionary process, especially for small populations. 4. I can explain how genetic drift is a nonselective process occurring in small populations. 5. I can explain how reduction of genetic variation within a given population can increase the differences between populations of the same species. 6. I can explain how a population’s ability to respond to changes in the environment is affected by genetic diversity. Species and populations with little genetic diversity are at risk for extinction. Last day for unit 2 test corrections! Actively read, take notes chapter 23 Watch video: o Solving Hardy Weinberg Problems 7. I can explain how genetic diversity allows individuals in a population to respond differently to the same changes in environmental conditions, such as: a. Not all individuals in a population in a disease outbreak are equally affected; some may not show symptoms, some may have mild symptoms, or some may be naturally immune and resist the disease. 8. I can explain how allelic variation within a population can be modeled by the Hardy-Weinberg equations. 9. I can explain that conditions for a population or an allele to be in Hardy-Weinberg equilibrium are: (1) a large population size, (2) absence of migration, (3) no net mutations, (4) random mating, and (5) absence of selections. These conditions are seldom met. 10. I can explain how some phenotypic variations significantly increase or decrease fitness of the organism and the population. a. Sickle cell anemia 11. I can explain how mathematical approaches are used to calculate change in allele frequency, providing evidence for the occurrence of evolution in a population. a. Graphical analysis of allele frequencies in a population Tuesday October 27 Wednesday October 28 Thursday October 29 Genetic Drift Activity Watch videos: o o AP Lab 2 – PTC testing AP Lab 2: Mathematical Modeling: Hardy Weinberg Microevolution Genetic Drift (Fast Plants Data) AP Lab 2: Mathematical Modeling: Hardy Weinberg Chapter 23 one-pager due tomorrow Watch videos: o Evolution Continues o Crash course: When Darwin met Mendel Mastering Biology quiz – chapter 23 AP Lab 2 report due Thursday, November 5 Work on AP Lab 2 report Friday October 30 Quiz – chapter 23 AP Lab 10 – data collection Monday November 2 Work on AP Lab 10 Report Posters (Fast Plants Data) Actively read, take notes chapter 24 Watch video: o Speciation and Extinction Present AP Lab 10 Report Posters Tuesday November 3 Strawfish Lab Speciation – Mechanisms Ring Species – Salamanders Chapter 24: The Origin of Species 1. I can explain how speciation may occur when two populations become reproductively isolated from each other. a. Speciation results in the diversity of life forms. Species can be separated by a geographic barrier such as an ocean or a mountain range, or various pre-and post-zygotic mechanisms can maintain reproductive isolation and prevent gene flow. b. New species arise from reproductive isolation over time, which can involve scales of hundreds of thousands or even millions of years, or speciation can occur rapidly through mechanisms such as polyploidy in plants. 2. I can explain that speciation rates can vary, especially when 3. 4. Wednesday November 4 adaptive radiation occurs when new habitats become available. I can explain how scientific evidence supports the idea that evolution has occurred in all species. I can explain how scientific evidence supports the idea that evolution continues to occur, such as: a. Chemical resistance (antibiotic resistance) b. Emergent diseases c. Observed directional phenotypic change in a population (Darwin’s finches) (Fast Plants Data) Allopatric vs. Sympatric Speciation Webquest Thursday November 5 * 5 Hour Day* (Fast Plants Data) Chapter 24 one-pager due tomorrow Watch videos: o Speciation o Crash Course Speciation Mastering Biology quiz – chapter 24 Quiz – chapter 24 Speciation – Adaptive Radiation Friday November 6 * 5 Hour Day* Monday November 9 Pollenpeepers Activity TESTING?? (Fast Plants Data) Phylogeny & Systematics Tree of Life Chapter 26: Phylogeny & the Tree of Life (sections 26.1-26.3, 26.6) 1. I can explain how biochemical and genetic similarities, in particular DNA nucleotide and protein sequences, provide evidence for evolution and ancestry. 2. I can explain how phylogenetic trees and cladograms are graphical representations (models) of evolutionary history that can be tested. a. Phylogenetic trees and cladograms can represent traits that are either derived or lost due to evolution, such as: i. Number of heart chambers in animals ii. Opposable thumbs iii. Absence of legs in some sea mammals b. Phylogenetic trees and cladograms illustrate speciation that has occurred, in that relatedness of any two groups on the tree is shown by how recently two groups had a common ancestor. c. Phylogenetic trees and cladograms can be constructed from morphological similarities of living or fossil species, and from DNA and protein sequence similarities, by employing computer programs that have sophisticated ways of measuring and representing relatedness among organisms. d. Phylogenetic trees and cladograms are dynamic (ie, phylogenetic trees and cladograms are constantly being revised), based on the biological data used, new mathematical and computational ideas, and current and emerging knowledge. 3. I can explain how molecular and genetic evidence from extant and extinct organisms indicates that all organisms on Earth share a common ancestral origin of life, such as: a. Scientific evidence includes molecular building blocks that are common to all life forms. b. Scientific evidence includes a common genetic code. 4. I can explain how mathematical models and simulations can be used to illustrate and support evolutionary concepts. a. Analysis of sequence data sets b. Analysis of phylogenetic trees c. Construction of phylogenetic trees based on sequence data Actively read, take notes chapter 26 Tuesday November 10 Constructing Phylogenies Cladogram practice Watch videos: Bozeman videos: o Phylogenetics o Cladograms OR Crash Course o Taxonomy- Life's Filing System: Biology #19 o Comparative Anatomy in Animals Wednesday November 11 (Fast Plants Data) Cladogram Lab Thursday November 12 AP Lab 3: BLAST Friday November 13 Quiz – chapter 26 Mastering Biology quiz – chapter 26 See Unit 4 syllabus for assignment AP Lab 1: Artificial Selection continues into Unit 4 AP Lab 3: BLAST Monday November 16 Tuesday November 17 (Fast Plants Data) Review Unit 3 Test