1 Genetics unit study guide Vocabulary: 11.1 11.2 11.3 12.2 12.3 12.4 asexual vs. sexual reproduction gamete vs. somatic cells zygote fertilization diploid vs. haploid homologous chromosomes sex chromosome vs. autosome meiosis vs. mitosis crossing-over independent assortment sperm vs. egg (ovum) allele dominant vs. recessive genotype vs. phenotype homozygous vs. heterozygous testcross polygenic character 13.1 13.2 13.3 14.1 15.2 15.3 3 DNA vs. gene vs. chromosome nucleotide (and its 3 parts) nitrogen base (adenine, guanine, cytosine, guanine, uracil (13.2)) double helix replication transcription vs. translation ribose vs. deoxyribose messenger vs. transfer vs. ribosomal RNA codon mutation (point vs. insertion vs. deletion) mutagen nondisjunction genetic engineering recombinant DNA plasmid (also in 14.3) restriction enzyme Textbook sections: 11.1 – Methods of producing new organisms --in asexual reproduction, _____ parent(s) transfer(s) DNA to the offspring, so the offspring is genetically (identical / different) than the parent(s) --in sexual reproduction, _____ parent(s) transfer(s) DNA to the offspring, so the offspring is genetically (identical / different) than the parent(s) --some organisms can do both (not humans!) … so why would an organism choose to reproduce asexually (what are its advantages?) why would an organism choose to reproduce sexually (what are its advantages?) --complete the blanks below with the words gene, chromosome, and DNA ___________ contains the code for making proteins. A small part of this sequence that codes for one specific protein is called a _________, and all of this can be packed up into a larger structure called a ____________. --chromosomes come in pairs … these pairs contain the same genes (though they might have slightly different versions) … I am showing three genes below on the pair of chromosomes A a r r Because these two chromosomes both contain the “A” gene, “R” gene, and “G” gene, the chromosomes are a pair, called G G ___________________ chromosomes. 2 --different species have different numbers of chromosomes – humans have ______ total chromosomes in every body cell (or __________ cell) … or _____ pairs of homologous chromosomes … these cells have paired chromosomes, so we call these cells (diploid / haploid) --of those chromosomes, one pair has genes that determine whether the human will be male or female … we call this pair the ____________________ --males have _______ chromosomes, females have ________ chromosomes --the other chromosomes have genes that do NOT determine male / female sex, so we call them _____________ --in reproduction, the goal is to deliver a copy of each pair of chromosomes (and the right number of chromosomes) to the offspring --asexual: parent produces a cell with all chromosomes for offspring (starting cell diploid ending cell diploid) --what type of cell division does this involve in eukaryotes? _______________ --what type of cell division does this involve in prokaryotes (see ch. 10)? ______________ ______________ --sexual: each parent produces cells that have half the chromosomes in them (starting cell diploid ending cell _____________) --reproduction occurs when sex cells (also called _____________) combine in an event called ____________________, now offspring has diploid cell again --what type of cell division produces haploid cells? see section 11.2 below 11.2 – Producing haploid cells, producing genetic variety Start: one diploid body cell (or germ cell) End: ___ ____________ _______________ (#) (haploid / diploid) (type of cell) Steps: look at the picture on p. 250-251 a) Duplicate chromosomes in interphase to make Xs b) Meiosis I – splitting up _______________________ (keep the Xs intact) c) Meiosis II – splitting up _______________________ (same as mitosis, review 10.2) Meiosis Purpose (in humans) Location of cell division (in humans) # cells produced # chromosomes in product cells (human) Haploid or diploid cells produced? Mitosis (review 10.2) 3 --Meiosis generates genetic variation in offspring --when lining up in meiosis I, the inner tips of the X pairs can switch with each other, called ____________________ --when lining up, the pairs of Xs can line up 2 different ways every time gametes are made – also, each pair of Xs lines up independently of each other … this is called ____________________________ (look at figure 6, p. 254) 11.3 – The role of mitosis and meiosis in an overall life cycle --be able to fill in the proper terms for the human life cycle (see next page), skim p. 258 and alternate life cycles (we will study these more next semester) human adult body cells Process: ____________ Type of cell: ______________ Circle: haploid / diploid Circle: haploid / diploid Process: ____________ Process: ____________ Type of cell Circle: general: ____________ haploid / diploid male: ___________ female: __________ 12.1, 12.2 and 12.3 – Mendel’s genetics (and Punnett squares) You can omit pedigree analysis section on pages 280-281 in section 12.3 --Mendel studied ______ _______ to understand the principles of genetics This plant is an excellent model for studying heredity—why? a) b) c) --Mendel knew nothing about DNA, proteins, chromosomes, or meiosis … but still discovered some basic principles about that can be explained with meiosis above --Mendel’s conclusions: 1) Pea plants have two copies of every trait connection to meiosis? 2) When reproducing offspring, these two copies separate – the offspring only gets one copy of the trait from each parent = Mendel’s law of _________________ connection to meiosis? 4 3) Some traits have two possibilities – if an organism received one type of trait from each parent, the organism will show the (dominant / recessive) trait (the other one hiding is called the (dominant / recessive) trait) connection to meiosis – these different possibilities are called _________. They represent slight differences in DNA coding that make slightly different proteins Connected with the above statement, an organism’s genotype is different from its phenotype (make sure you understand the difference) T = tall allele t = short allele Genotype possibilities: TT (called __________ ___________ generally) Tt (called _______________ generally) tt (called __________ ___________ generally) Phenotype possibilities: tall or short --Mendel was able to tell the difference between TT tall and Tt tall plants (even though they looked identically tall). How could he tell them apart using a test cross? (p. 277 quicklab) (show Punnett squares and explain results) 5) Traits are independent of each other – whether a plant is tall or short does not affect the odds of producing offspring with green or yellow seeds = Mendel’s law of ________________ connection to meiosis? (assuming two genes are on different chromosomes) --Be able to set up and analyze a one trait Punnett square a) Convert words to parent genotypes c) Convert offspring genotypes into words b) Create and fill in Punnett square d) Calculate simple probabilities --Be able to set up a dihybrid Punnett square showing the different gametes that each parent could create --for example, cross a PpYy parent with a PPYy parent --name 4 different gametes made by PpYy parent? _____, _____, _____, _____ --name 2 different gametes made by PPYy parent? _____, _____ 12.4 – Beyond pea plants: non-Mendelian genetics Assumptions in Mendel’s pea-plant genetics often are not valid in more complex organisms 1) Assumption: Only one gene controls the trait we are talking about Exception: Multiple genes influence an overall trait, called ____________ _____________ (example: _______________) 2) Assumption: One allele completely dominates the other Exception: a) Incomplete dominance – b) Codominance – 3) Assumption: There are only two possibilities for one gene (tall or short, yellow or green) Exception: Multiple alleles (example: _________________) 5 4) Assumption: Only genes influence traits Exception: Environmental factors may play a role in the overall phenotype of an organism 5) Assumption: Genes are inherited independently because they are on different chromosomes Exception: ________ genes are inherited together because they are on the same chromosome 13.1 – Structure of DNA --Recall the function of DNA (cell unit) --DNA is built from lots of _____________ combining together --Each unit is made of three parts: a ___________, _________, and ___________ --In DNA, there are four possible bases that make up the code (often abbreviated as one letter): _________ (__), _________ (__), _________(__), and _________.(__) _________ (__) pairs with _________ (__) _________ (__) pairs with _________ (__) --What bond forms between the above bases? ____________ bonds which are (weak / strong) --These components come together to give DNA the overall shape of a _________ _________. 13.2 – How the cell makes a copy of the DNA code --Copying the DNA instructions is called DNA _______________ --Recall when the cell needs to make a copy of DNA (during cell division, including both ______________ and _____________) --Explain the steps of this process (illustrated p. 292-3) – draw a picture also Step 1: _______________________________________________________ Step 2: _______________________________________________________ Step 3: _______________________________________________________ --be able to match base pairs given DNA during replication --to prevent errors in the new code, __________ “proofread” the DNA as it is copying --generally, (prokaryotic / eukaryotic) cells have more DNA 13.3 – Expressing a gene – building a protein using transcription and translation --Reminder – what are proteins built from? __________ __________ --What small organelle is in charge of protein construction? ______________ --RNA – takes message in between DNA (in nucleus) and the ribosome (in cytoplasm) --RNA is a nucleic acid, but different from DNA in 3 ways: 1) The sugar that makes up RNA’s nucleotides is called _________, whereas DNA’s sugar is called ________________ 6 2) RNA is (single / double) stranded, while DNA is (single / double) stranded 3) RNA has one different nitrogen base: instead of _________(__) (in DNA), RNA uses _________ (__) to pair with _________ (__) on DNA Building a protein: Step 1: Transcription—copying DNA instructions and bringing to the construction crew --DNA never leaves the __________ in eukaryotes. It should be protected at all times. (Actually, one time in the cell unit DNA left the nucleus … when?) overview:--mRNA (the m stands for _________) reads the DNA inside the _________ and brings the message out into the _________ where the ribosomes are located Step 1: Enzymes unzip DNA by breaking the _________ _________ between bases Step 2: RNA nucleotides match up with one of the DNA strands Step 3: Single RNA strand leaves nucleus, DNA strands reconnect (and stay in nucleus) --be able to match mRNA base pairs given a sample strand of DNA (p.296) Step 2: Translation—reading the instructions and building protein (takes place where again?) --three different components coming together: 1) mRNA – carries instructions from DNA 2) rRNA – (r stands for _________) – what’s its job? 3) tRNA – (t stands for _________) – what’s its job? --mRNA’s code is read in groups of _____ (number) letters at a time – this group is called a __________ on mRNA Step 1: rRNA in ribosome binds to mRNA Step 2: 1st tRNA binds to mRNA start codon and attaches 1st amino acid Step 3: 2nd tRNA binds to mRNA and attaches 2nd amino acid Step 4: 3rd tRNA binds to mRNA and attaches 3rd amino acid […] (tens or hundreds of amino acids continue to be added) Step 5: Final tRNA binds and “cuts” the string of amino acids away from the ribosome – amino acids go on to fold up into proper protein shape --(from cell unit) – proteins may also go on to the ______________ ____________ in eukaryotes, where proteins are modified some more --Be able to match mRNA codons with amino acids (p. 307 chart will be available during test) --(not in book) I just want you to appreciate that ALL your body cells have the same DNA (after all, they were created by mitosis) … so they have different functions because each cell expresses different genes within the overall code 14.1 – Mutation --what is a mutation? --mutations are NOT always harmful … they can no effect, or even be helpful --_________ are environmental factors that can cause mutations --2 major categories include _________ and _________ 7 --If mutations occur in _________ cells, then the effects could be passed on to future offspring. --if mutations occur in genes which code for proteins that control the cell cycle, then _________ can result --Some types of mutations: --point mutation— _____________________________________________ --could be a silent mutation, which means what? --could change one amino acid in protein --frameshift mutation – _________________________________________ --could involve additions OR deletions to DNA code --why does this usually cause more of a change in protein than point mutation? --Errors can occur in meiosis, and create gametes with too many or not enough chromosomes --the failure to separate chromosomes is called ___________________ --name one example of a disorder caused by this problem Omit ALL 14.2 and 14.3 15.1 – Human genome --read p. 345 & p. 348 for current findings and future genetic research (you can omit p. 346-7) 15.2 and 15.3 – Selected examples of genetic engineering (omit other pages in sections) --read “manipulating genes” section p. 350 and 351 (omit “manipulating cell interactions” --read “ethical and social issues” p. 354 --read p. 360 for a method of achieving genetic engineering using restriction enzymes, bacterial plasmids, and an antibiotic screen --explain the role of restriction enzymes --explain the role of bacterial plasmids --explain the role of the antibiotic