Kollokvier og Projektoplæg
1. Fredag d. 2.9.
 Peter Arctander: Introduktion til ME05
 En kort gennemgang af projekterne. Sammensætning af
grupper og valg af projekter.
Seminar: Hans Siegismund og Peter Arctander: Afdelingens
projekter med store planteædere i Afrika.
2. Fredag d. 9.9.
Studenteroplæg; Majken Sønderholm
 Muwanika,V.B., S. Nyakaana, H.R. Siegismund and P. Arctander
2003.Phylogeography and population structure of the common
warthog (Phacochoerus africanus) inferred from variation in
mitochondrial DNA sequences and microsatellite loci. Heredity
91: 361-372.
Studenteroplæg; Janni Albertsen
 Seielstad, M.T., E. Minch & L. Cavalli-Sforza. 1998 Genetic
evidence for a higher female migration rate in humans. Nature
Genetics 20: 278-280.
 Wilder, J.A., S.B. Kingan, Z. Mobasher, M. M. Pilkington & M.F.
Hammer. 2004 Global patterns of human mitochondrial DNA and
Y-chromosome structure are not influenced by higher migration
rates of females versus males. Nature Genetics 36: 1122-1125.
Studenteroplæg; Daniel Cappiello
 N.A. Rosenberg, J.K. Pritchard, J.L. Weber, H.M. Cann, K.K. Kidd,
L.A. Zhivotovsky, M.W. Feldman. 2002 Genetic Structure of
Human Populations. Science 298: 2381-2385.
3. Fredag d. 16.9.
Studenteroplæg (2 studenter)
 Fylogenetisk rekonstruktion. Graur, D. & W.H. Li. 2000
Chapter 5, Molecular Phylogenetics.
Studenteroplæg
 HIV evolution. Korber, B., M. Muldoon, J. Theiler, F. Gao, R.
Gupta, A. Lapedes, B. H. Hahn, S. Wolinsky, and T.
Bhattacharya, 2000 Timing the ancestor of the HIV-1 pandemic
strains. Science 288: 1789-1796.
Studenteroplæg
 HIV. Ou, C.Y. et al. 1992 Molecular Epidemiology of HIV
Transmission in a Dental Practice. Science. 256:1165-1171
4. Fredag d. 23.9.
Studenteroplæg; Jacob Guenther Schmidt
 Lysozym. Irwin, D. M., Prager, E. M. and Wilson, A. C. (1992):
Evolutionary genetics of ruminant lysozymes. Animal Genetics,
23: 157-166. Ingen pdf
 Messier, W. and Stewart, C. B. (1997): Episodic adaptive
evolution of primate lysozymes. Nature, 385: 151-154 Lærebog
f.eks.: Gen-dynamik i populationer (pp 39-65)
Studenteroplæg; Louise Hebert Halle
 UV-syn. Shi, Y. and Yokohama, S. 2003: Molecular Analysis of
the evolutionary significanse of ultraviolet vision in vertebrates.
PNAS 100:8308-8313.
 Zhang, J. 2003: Paleomolecular biology unravels the evolutionary
mystery of vertebrate UV vision. PNAS 100.8045-8047.
Studenteroplæg; Christian Roar Andersen Weile
 psi gær prion, True, H., Lindquist, S., 2004. Epigenetic
regulation of translation reveals hidden genetic variation to
produce complex traits. Nature. 431:184-7 Epub August 15.

Alain E. Bussard (2005): A scientific revolution? The prion
anomaly may challenge the central dogma of molecular biology.
EMBO Reports 6:691-695.

Hsp70 hos Drosophila. Christine Queitsch, Todd A. Sangster &
Susan Lindquist (2002): Hsp90 as a capacitor of phenotypic
variation. Nature 417: 618-624.
5. Fredag d. 30.9.
Studenteroplæg; Anders Kofoed
 Genomisk output. Jill Cheng, Philipp Kapranov, et al. (2005):
Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide
Resolution. Science 308:1149-1154.
Studenteroplæg; Kirsten Ellegaard
 Splejsning. Graveley, B. R. (2001): Alternative splicing:
increasing diversity in the proteomic world. Trends in Genetics,
17(2): 100-107.
Studenteroplæg; Casper
 RNA-editing. Maas, S. and Rich, A. (2000): Changing genetic
information through RNA editing. BioEssays 22(9): 790-802
 Stuart, K., Panigrahi, AK 2002: RNA editing: complexity and
complications. Molecular Microbiology 45:591-596
Studenteroplæg; Rasmus Heller
 Hard wired – soft wired. Herbert, A. & Rich, A., 1999: RNA
processing and the evolution of eukaryotes. Nature Genetics 21:
265-269.
6. Fredag d. 7.10.
Studenteroplæg;
 ncRNA regulerende netværk. Mattick, JS 2004: RNA
regulation: a new genetics? Nature Reviews Genetics 5:316-323.
Studenteroplæg; Tom Manczak
 miRNA. Novina, CD & Sharp, PA, 2004: The RNAi revolution.
Nature 430: 161-164
Studenteroplæg; Dorte Bek
 miRNA. Erno Wienholds, Wigard P. Kloosterman, Eric Miska,
Ezequiel Alvarez-Saavedra, Eugene Berezikov, Ewart de Bruijn,
H. Robert Horvitz, Sakari Kauppinen, Ronald H. A. Plasterk
(2005): MicroRNA Expression in Zebrafish Embryonic
Development. www.sciencexpress.org /26 May 2005 / Page 1/
10.1126/science.1114519
Studenteroplæg; Christina Abel
 ultra-konservative elementer. Gill Bejerano, Michael
Pheasant, Igor Makunin, Stuart Stephen, W. James Kent, John S.
Mattick, David Haussler (2004): Ultraconserved Elements in the
Human Genome. Science 304: 1321-1326.
7. Fredag d. 14.10.
Studenteroplæg; Elsi Sinikka Kauppinen
 Retrotransposition, overblik: T. Mourier (2005): Reverse
transcription in genome evolution. Cytogenetic and Genome
Research 2005, Vol. 110, No. 1-4: 56-62
Studenteroplæg; Dennis Persson
 TE og genomer: J. Brosius (2005): Echoes from the past – are
we still in an RNP world? Cytogenet Genome Res 110:8–24
(2005)

TE og mosaicism. Moutori et al. (2005); Somatic mosaicism in
neuronal precursor cells mediated by L1 retrotransposition.
Nature 435:903-910.
Studenteroplæg; Jesper Phillip Christensen Aagaard
 TE RNA-edit og splejsning, Alu og Line. A. Athanasiadis, A.
Rich, S. Maas (2004): Widespread A-to-I RNA Editing of AluContaining mRNAs in the Human Transcriptome. Plos 2:e391

D.Y. Kim et al. (2004): Widespread RNA Editing of Embedded Alu
Elements in the Human Transcriptome. Genome Research
14:1719–1725.
Projekt oplæg, hold x
8. Fredag d. 28.10.
 Projekt oplæg, hold
 Projekt oplæg, hold
 Projekt oplæg, hold
 Projekt oplæg, hold
x
x
x
x
9. Fredag d. 4.11
 Projekt oplæg, hold x
 Projekt oplæg, hold x
 Projekt oplæg, hold x
Afslutning og evaluering
Projektarbejde og seminarer
1. Tirsdag d. 6.9.
 Seminar
2. Tirsdag d. 13.9.
 Seminar: Rasmus Nielsen
3. Tirsdag d. 20.9.
 Seminar: Jon Bollback: experimental virus evolution
4. Tirsdag d. 27.9.
 Seminar: Tobias Mourier: Plasmodium RNA genes
Paul Gardner: Affymetrix tiling arrays
5. Tirsdag d. 4.10.
 Seminar: Morten Lindow: Finding miRNAs
6. Tirsdag d. 11.10.
• Seminar : Jonas Bin-Laden: Introduktion til fossilt DNA
7. Tirsdag d. 25.10.
 Seminar
8. Tirsdag d. 1.11.
 Afslutning og evaluering
Seminarer
Dato ikke fastlagt
1.
Anders Krogh: bioinformatik
2.
Eline Lorenzen: Impale populations- og bevaringsgenetik
3.
Mads Hedegaard
4.
Henrik Glenner
5.
Duur K. Aanen