nmr liu

advertisement

SOLUTION CONFORMATION OF ENOPEPTIN-A, A DEPSIPEPTIDE

ANTIBIOTIC, USING 2D-NMR AND RESTRAINED MOLECULAR-

DYNAMICS STUDIES

By: YOUNG, JJ (YOUNG, JJ); JUNG, LJ (JUNG, LJ); LIU, WT (LIU, WT); HO, SN (HO, SN); CHANG, LR (CHANG,

LR); TSAI, YC (TSAI, YC); BHASKARAN, R (BHASKARAN, R); YU, C (YU, C)

JOURNAL OF ANTIBIOTICS

Volume: 47

Issue: 8

Pages: 922-931

Published: AUG 1994

View Journal Information

Abstract

Studies on the solution conformation of the cyclic depsipeptide antibiotic enopeptin A have been carried out using 2D

NMR and molecular modelling techniques. The proton resonances of the antibiotic in DMSO-d(6) have been assigned by the use of TOCSY and ROESY experiments. The interproton distance information obtained from the ROESY experiments have been used as the basis for elucidating the probable structures in solution. The restrained molecular dynamics technique was applied to calculate the structures in solution, and six resultant structures with fewer distance constraint violations were obtained that satisfy the experimental restraints very well. The conformation of the cyclic moiety of the molecule is well defined whereas the aliphatic chain segment is disordered.

Keywords

KeyWords Plus: NUCLEAR-MAGNETIC-RESONANCE ; ROTATING-FRAME ; X-RAY ; H-1-

NMR ; SPECTROSCOPY ; REFINEMENT ; PROTEIN ; DNA

Author Information

Addresses:

[ 1 ] NATL TSING HUA UNIV,DEPT CHEM,HSINCHU,TAIWAN

[ 2 ] NATL DEF MED CTR,INST PREVENT MED,TAIPEI,TAIWAN

[ 3 ] NATL CTR HIGH PERFORMANCE COMP,HSINCHU,TAIWAN

[ 4 ] BHARATHIDASAN UNIV,DEPT PHYS,TIRUCHCHIRAPPALLI 620024,INDIA

Publisher

JAPAN ANTIBIOT RES ASSN, 2 20 8 KAMIOSAKI SHINAGAWA KU, TOKYO 141, JAPAN

Categories / Classification

Research Areas: Biotechnology & Applied Microbiology; Immunology; Microbiology; Pharmacology & Pharmacy

Web of Science Categories: Biotechnology & Applied Microbiology; Immunology; Microbiology; Pharmacology &

Pharmacy

Document Information

Document Type: Article

Language: English

Accession Number: WOS:A1994PD96100011

PubMed ID: 7928680

ISSN: 0021-8820

Other Information

IDS Number: PD961

Cited References in Web of Science Core Collection: 24

Times Cited in Web of Science Core Collection: 3

Download