Lab # _____: Simulating Protein Synthesis with Words Lab Skills: 26. 27 Background: Genes are the units on the chromosomes that determine inherited characteristics such as hair color or blood type. Genes are lengths of DNA molecules whose sequence of nucleotides determine the sequence of amino acids in protein synthesis. In a process called transcription that takes place in the nucleus of a cell, messenger RNA (mRNA) is formed by lining up nucleotides that are complementary to a DNA strand. The mRNA then carries this information in the form of a code to the ribosomes, where protein synthesis takes place. The code, in DNA or mRNA, specifies the order in which the amino acids are joined together to form a protein. The code words in mRNA, however, are not directly recognized by the corresponding amino acids. Another type of RNA called transfer RNA (tRNA) is needed to bring the amino acids to the mRNA on the ribosome. As the code on the mRNA is ‘read’ on a ribosome, the proper tRNAs arrive in turn and give up the amino acids they carry to the growing protein chain. The process by which the information in the mRNA is transferred into a protein is called translation. In this laboratory investigation, you will simulate the mechanism of protein synthesis and thereby determine sentences based on DNA fragment codes and a reference table of words determined by triplet code translations. By completing this lab we will be able to illustrate exactly how DNA determines an organism’s characteristics. Hypothesis: If the DNA code determines which proteins are assembled by an organism’s cells, then it determines an organism’s… . (fill in the blank) Procedure: 1. Choose any 11 of the first 19 DNA fragments and transcribe DNA to mRNA, translate to tRNA and find the corresponding word from the chart below. Write in the resulting sentences on the data collection worksheet. Triplet Code Translations UAG = Stop (period) AUG = Initiator (Start) AAA = Your AAC = mother ACG = funny ACA = breath AGU = Beatles AUC = band CAC = rubber CCA = when CUC = love GAA = all GAU = and GCG = fun GGC = to GUA = a GUU = nothing UAU = this UCG = be UGC = you UUA = DNA UUU = life CCG = is CCU = subject CGA = drink AAG = wears ACC = have AGA = the AGC = best AUU = an CAG = breaks CCC = Biology CUG = roll GAC = demented GCA = so GCU = education GGG = future GUC = dress UAA = we UCA = together UCU = informed UGG = read UUC = code CGC = water CGG = every CGU = day AAU = dresses ACU = dog AGG = are AUA = rock CAA = old CAU = pulled CUA = I CUU = music GAG = puppies GCC = much GGA = door GGU = father GUG = brother UAC = in UCC = must UGA = around UGU = little UUG = for 2. You will create a sentence from the word list and work backward to list the DNA code for #20. Analysis: A. What are genes and what are they made of? B. What is transcription and where does it take place? C. What is translation and where does it occur? D. How could one change in a DNA nucleotide alter the structure of the protein that is made? E. If you knew the amino acid composition of a certain protein within a cell how would you determine the particular DNA sequence of nucleotides that coded for it? Name(s): ________________________________________________________________________________________ Simulating Protein Synthesis with Words Data Collection Answer Sheet DNA mRNA tRNA Sentence AAA DNA mRNA tRNA Sentence AAA DNA mRNA tRNA Sentence TAA DNA mRNA tRNA Sentence AGA DNA mRNA tRNA Sentence ATT DNA mRNA tRNA Sentence CCC DNA mRNA tRNA Sentence CGA DNA mRNA tRNA Sentence CTA DNA mRNA tRNA Sentence TAA DNA mRNA tRNA Sentence CCC AAC AAG GTA CAC ATC TAG DNA Fragment #1 AAC AAT TGC ACG TAG DNA Fragment #2 ACC ACT ACA TAG DNA Fragment #3 AGT AGG AGA AGC ATA ATC TAG DNA Fragment #4 CAA CAC ATC CAG CCA CAT TAG DNA Fragment #5 CCG AGA AGC CCT TAG DNA Fragment #6 CGC CGG CGT TAG DNA Fragment #7 CTC ATA GAT CTG CTT TAG DNA Fragment #8 AGG GAA GAC GAG TAG DNA Fragment #9 CCG GCA GCC GCG TAG DNA Fragment #10 DNA mRNA tRNA Sentence GCT DNA mRNA tRNA Sentence AAA DNA mRNA tRNA Sentence AAA DNA mRNA tRNA Sentence TAA DNA mRNA tRNA Sentence TAA DNA mRNA tRNA Sentence ATA DNA mRNA tRNA Sentence CCC DNA mRNA tRNA Sentence TGG DNA mRNA tRNA Sentence TTA DNA mRNA tRNA Sentence CCG AGA GGA GGC AGA GGG TAG DNA Fragment #11 GGT AAG GTA GTC TAG DNA Fragment #12 GTG AAG GTT TAG DNA Fragment #13 AGG GAA TAC TAT TCA TAG DNA Fragment #14 TCC TCG TCT CGG CGT TAG DNA Fragment #15 GAT CTG CTT CCG AGA AGC TAG DNA Fragment #16 CCG GAA TGA TGC TAG DNA Fragment #17 GTA TGT CGG CGT TAG DNA Fragment #18 CCG AGA TTC TTG TTT TAG DNA Fragment #19 You create DNA Fragment #20