Supporting information 1
List of single layer study cases
Information layer
Genetic constraints
Gene fusion
Operons
Codon Adaptation Index
Genomic constraints
Horizontal gene transfer
Pathogenicity
Antibiotic resistance
DNA- repair
Replication
Transcription
Taxonomic information
Comparative genomics
Metabolic information
Constraints-based modeling
Dynamic modeling
Metabolomics
Improved gene models
Metabolic pathways identification
Genomes re-annotations
Transcriptomics
Functional insights from co-expression
Epigenomics
Single-base and strand resolution
Non-genetic individuality
Gene expression regulation
Structure/function relationships
Adjustment to changing environment
Pathogenesis/virulence
Proteomics
Protein-protein interactions
Protein expression
Phenomics
Phenotype MicroArrays
Single cell microscopy
Protein expression
Protein localization
Protein interaction
Interaction between host and bacterial cells
Super resolution
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