Supporting Information A simple method for assessment and minimization of errors in determination of electrophoretic or electroosmotic mobilities and velocities associated with the axial electric field distortion Paweł Nowak, Michał Woźniakiewicz*, Paweł Kościelniak Jagiellonian University in Kraków, Faculty of Chemistry, Department of Analytical Chemistry, Kraków, Poland Abstract It is commonly accepted that the modern capillary electrophoresis instruments equipped with efficient cooling system enable accurate determination of electrophoretic or electroosmotic mobilities. It is also often assumed that velocity of migration in a given buffer is constant throughout the capillary length. It is simultaneously neglected that the non-cooled parts of capillary produce extensive Joule heating leading to an axial electric field distortion, which contributes to a difference between the effective and nominal electric field potentials and between velocities in the cooled and non-cooled parts of capillary. This simplification introduces systematic errors, which so far were however not investigated experimentally. There was also no method proposed for their elimination. We show a simple and fast method allowing for estimation and elimination of these errors that is based on combination of a long-end and short-end injections. We use it to study the effects caused by variation of temperature, electric field, capillary length, and pH. Corresponding Author: *Michał Woźniakiewicz, PhD, Jagiellonian University in Kraków, Faculty of Chemistry, Department of Analytical Chemistry, Kraków, Poland, Ingardena St. 3, 30-060 Kraków, Poland, michal.wozniakiewicz@uj.edu.pl, tel./fax: +48 12 663 20 84 1 1. Velocities in the cooled and non-cooled sections From the plots presenting relationship between average velocity and contribution of the noncooled section one can calculate local velocities in the thermostated and unthermostated capillary parts. The values obtained using different separation voltages and 59.0 cm long capillary have been depicted in Fig.S-1. Fig.S-1.The calculated values of local electrophoretic (A), electroosmotic (B) or total/apparent (C) velocities in the cooledor non-cooled (C/NC) capillary sections, referring to variable temperature of coolant and separation potential. Owing to the calculation method used to obtain these data, which is based on linear model fitted to only two independent experimental points, these values should be used rather for qualitative comparison than for quantitative analysis. Generally, a steep increase of the velocity in the cooled region is observed with growing temperature and separation voltage. The velocities in the non-cooled region, interestingly, behave in a quite specific manner. Electroosmotic velocities grow linearly with temperature, however not so steep as in the cooled region. The absolute values of electrophoretic velocities, 2 in turn, grow only subtly or even decrease with temperature, as it is noted for 25 and 30 kV voltages, yielding yet greater nonuniformity of axial velocity throughout the capillary. It is noticeable that at higher temperature the change of electrophoretic velocity between two capillary parts is really pronounced, even 5-fold difference is noted. It implies that difference in the local electric field potentials can be similarly significant, yet greater than 1.5-fold difference noted by Krylov’s group at low temperature [1]. The sum of electrophoretic and electroosmotic velocities, i.e. total velocity, resembles the behavior of electroosmotic component due to its leading contribution. All these values, however, should be used rather for indication of trends than for quantitative description. It results from the calculation method, based on an approximate linear model. At this point an interesting question emerges, whether different values of electroosmotic velocity in the cooled and non-cooled parts indicate that the bulk solution migrates with different velocity in the same capillary vessel of the same diameter? One should be aware that the mass conservation low is always fulfilled, so that any changes in axial velocity would be adequately compensated by changes of pressure [2,3], but such phenomenon cannot be confirmed now. Remarkably, radial gradients of temperature, pressure and velocity contribute to laminar flow profile of bulk solution, and they may also have a bearing on the measured migration times of EOF marker. The other issue is accuracy of our method of velocity determination, especially due to the fact that the model is built only on two independent measurements, and that some variations of electroosmosis could also take place in time of separation. Deeper insight into these phenomena seems to be very interesting, and this will be one of the aims of our future work. To confront differences in velocities in the cooled and non-cooled sections with differences in temperature reached in each part, we have employed a simplified universal method for predicting electrolyte temperatures (SUMET) proposed by Krylov’s group [4]. On this basis the 3 differences in temperature have been estimated at four separation voltages, depicted in Table S-1. Table S-1. The predicted relation between separation voltage and difference of temperature between the cooled and non-cooled capillary parts at nominal temperature of coolant amounting 20 ̊C. Separation Temperature voltage (kV) difference ( ̊C) 12.5 6.3 20.0 12.5 25.0 17.9 30.0 23.3 It is seen that the differences are quite significant, up to 23.3 ̊C for separation voltage of 30 kV and temperature of coolant of 20 ̊C. One may assume that they will be yet greater at higher temperature of coolant due to the abovementionedauto-thermal effect. 2. Effect of capillary length Separation voltage has been decreased proportionally to capillary length, to keep the value of the nominal electric field potential unchanged. Fig.S-2 shows the results obtained for two distinct potentials. One can see that each capillary length has its own characteristics of the generated errors. The errors differ in magnitude for distinct capillaries despite keeping the same potential, but also in some temperature ranges, differ in sign. It is also interesting that the shape of plots is however somehow similar between distinct capillaries of the same potential values. In general, it implies that in the shorter capillary the velocities reached in the cooled region can be lower than in the non-cooled region, what was not observed for the longer capillary. This may be caused by the more significant role of viscosity-related effect comparing to field distortion-related effect in the shorter capillary. The relation between velocities can be however reversed at specific temperature values, as it is also seen on the charts (intersection with x axis). Another interesting observation is that the relative errors can decrease with increase in nominal temperature of coolant, although the absolute errors still grow in such case (not shown). Further elucidation of 4 these outcomes is not the current purpose, but seems to be fairly promising to enable a deeper understanding of these phenomena. Fig.S-2. Presentation of the predicted relative errors of electrophoretic (left) or electroosmotic (right) mobilities as a function of nominal temperature in relation to two distinct total capillary lengths. Two different nominal voltage-to-length ratios (electric field potentials) have been chosen and kept unchanged for the long and short capillaries. 5 3. Supplementary results Table S-2. The values of current, power, and power per length measured for the minimal and maximal separation voltages applied during experiments: 12.5 and 30.0 kV, in relation to temperature, for 59.0 cm total capillary length. Current (µA) Temperature ( ̊C) 20 30 40 50 60 Power (W) Power / length (W/m) 12.5 kV 30.0 kV 12.5 kV 30.0 kV 12.5 kV 30.0 kV 35.4 42.8 50.5 58.5 66.4 97.0 120.7 144.0 168.8 190.7 0.44 0.54 0.63 0.73 0.83 2.91 3.62 4.32 5.06 5.72 0.75 0.91 1.07 1.24 1.41 4.93 6.14 7.32 8.58 9.70 Table S-3. The values of CV in percentages (coefficient of variation) calculated for migration times of EOF marker (DMSO) and 10-hydroxywarfarin (W10) from 3 repetitions, performed using separation voltage of 30 kV. 20 30 40 50 60 long-end short-end injection injection DMSO W10 DMSO W10 2.1 2.2 1.7 3.3 1.9 4.2 1.5 4.4 1.6 4.6 1.3 4.5 1.2 3.4 2.6 2.9 8.4 10.4 3.1 5.2 References [1] Evenhuis, C. J., Musheev, M. U., Krylov, S. N., Anal. Chem. 2010, 82, 8398–8401. [2] Xuan, X., Li, D., Electrophoresis 2005, 26, 166–175. [3] Xuan, X., Li, D., J. Chromatogr. A 2005, 1064, 227–237. [4] Evenhuis, C. J., Musheev, M. U., Krylov, S. N., Anal. Chem. 2011, 83, 1808–1814. 6