1 Supplementary information 2 Text S1. Calculation of livestock numbers in Europe 3 Major-ruminant livestock numbers from statistics (e.g., FAOstat, 2013) are provided as head 4 of dairy cows, beef cattle, sheep and goats. The energy and feed requirement can be different 5 for animals of different categories or even the same species with different liveweight and milk 6 productivity. The Livestock Unit (LU) is used to compare or aggregate numbers of animals of 7 different 8 http://ec.europa.eu/agriculture/envir/report/en/lex_en/report_en.htm) 9 requirements of the different animals. In this study, livestock species are converted to LU 10 based on the calculation of metabolisable energy (ME) requirement of each type of animal. 11 ME (also called net energy) is the amount of energy an animal needs for maintenance and for 12 activities such as growth, lactation and pregnancy. All calculations hereafter are given for 13 each country per year. The total number of ruminant livestock (Ntotal; in LU) is calculated as: 14 ππ‘ππ‘ππ = 15 where MELU is the ME requirement by one LU defined in this study (an adult dairy cow 16 producing 3000 kg milk annually, with live body weight of 600 kg; Eurostat, 2013); MEtotal is 17 the annual total ME requirement by all major ruminants, and is given by: 18 ππΈπ‘ππ‘ππ = ∑(ππΈπ,π × ππ,π ) 19 where Ni,j is number (in head from FAOstat) of animals in category i, type j; and MEi,j is the 20 ME requirement of animals in category i, type j; here, the category indicates whether the 21 animals are cattle, sheep or goats, and the type indicates the animals are producing milk, 22 slaughtered for meat, or animals neither producing milk nor slaughtered for meat in that year 23 (called residual animals in this study). FAOstat (2013) provides annual country-averaged species or categories (source: based ππΈπ‘ππ‘ππ ππΈπΏπ on the feed (Eq. S1) (Eq. S2) 24 statistical data on numbers of major ruminant live animals stocks, milking animals (producing 25 milk)/slaughtered animals (producing meat), and correspondent milk yield for milking 26 animals (i.e., dairy cows, and sheep and goats for milk) and meat yield (carcass weight) for 27 meat animals (i.e., beef cattle, and sheep and goats for meat). When the numbers of total live 28 animal stocks (cattle, sheep or goats) are larger than the sum of milk and slaughtered animal 29 numbers, the residual animal numbers are calculated as the difference between total live 30 animal stocks and the sum of milk and slaughtered animal numbers. 31 The calculation of ME requirement for animals of each category and type follows the IPCC 32 Tier 2 algorithms (IPCC, 2006 Vol 4, Chapter 10, Eqns 10.3 to 10.13). ME includes the net 33 energy for maintenance (NEm), activity (NEa), growth (NEg), lactation (NEl), draft power 34 (NEwork; cattle only), wool production (NEwool; sheep only), and pregnancy (NEp): 35 ππΈ = ππΈπ + ππΈπ + ππΈπ + ππΈπ + ππΈπ€πππ + ππΈπ€πππ + ππΈπ 36 where NEl is only for milk animals. It is noteworthy that NEg and NEwool were not calculated 37 in this study due to the limitation on data availability (i.e., average daily weight gain and wool 38 productivity). 39 The most critical animal performance data required for each animal category to estimate ME 40 are liveweight (for the calculation of NEm, and further for NEa, NEwork and NEp) and average 41 daily milk production (for the calculation of NEl). The liveweight was calculated as: 42 πΏππ£ππ€πππβπ‘ = π·πππ π πππ πππππππ‘πππ 43 where dressing percentage is the conversion factor between carcass weight and live weight, 44 and the values are derived from Opio et al. (2013; see their Appendix B, Tables B20 and 45 B21). πΆπππππ π π€πππβπ‘ (Eq. S3) (Eq. S4) 46 In addition, several assumptions were made for the ME calculation: 1) the milk animals and 47 the residual animals have the same liveweight as the meat animals; 2) the residual animals 48 have no ME requirement for lactation (NEl) or pregnancy (NEp); 3) each animal spends an 49 hour per day working to search for food (used for calculation of NEwork,). 50 The ME requirement by one LU (MELU) is calculated to be ca. 85 MJ day-1. Then the gross 51 energy (GE) requirement is derived based on the summed ME requirements and the energy 52 availability characteristics of the feed(s) given by Eqn 10.16 of IPCC (2006). In this study, 53 low quality forage (such as mature grass) with typical digestible energy expressed as a 54 percentage of gross energy (DE%) of 55% was assumed. Finally, to convert from GE in 55 energy units to dry matter intake (DMI), we divided GE by the energy density of the feed 56 (with a default value of 18.45 MJ kg-1 of dry matter; IPCC, 2006). As a result, the daily dry 57 matter intake (DMI) of one LU was calculated as ca. 18 kg. 58 Figure S2 shows the total number of ruminant livestock (Ntotal; in LU) in each of the major 59 agricultural regions of Europe (Olesen & Bindi, 2002) and their evolution during the period 60 1961-2010. 61 62 63 Text S2. Components of the GHG budget 64 In this study, grassland based farm systems are defined. All grass products (harvested biomass 65 or grazing pasture) are used to feed livestock (grass-fed livestock numbers). All harvested 66 grass is assumed to be consumed on-farm and all manure returned to the grassland. Therefore, 67 both the ecosystem and off-site (at farm scale) GHGs fluxes are considered. The IPCC 68 guidelines for national greenhouse gas inventories (IPCC, 2006) provide methods of 69 calculating GHGs emissions from managed soil, from livestock and from manure 70 management, which is the reference in the calculation described below except for those 71 simulated by ORCHIDEE-GM. 72 73 The GHG fluxes of grassland ecosystem 74 The net GHG exchange (NGE; Soussana et al., 2007) represents GHG balance of a grassland 75 ecosystem. It can be calculated by adding CH4 and N2O emissions to NEE using the global 76 warming potential of each of these gases at 100-year time horizon (IPCC, 2013): 77 ππΊπΈ = −(ππΈπΈ + πΉπΆπ»4 −πππ × πΊπππΆπ»4 + πΉπ2 π−πππ × πΊπππ2 π ) 78 where GWPCH4 = 12.36, as 1 kg C-CH4 = 12.36 kg C-CO2; GWPN2O = 127.71, as 1 kg N-N2O 79 = 127.71 kg C-CO2; FCH4-eco is CH4 emission by grazing animals; FN2O-eco is direct and 80 indirect N2O emission from managed soil (based on IPCC, 2006). A positive value indicates 81 the grassland is a net sink of GHG. 82 CO2 fluxes in a grassland ecosystem 83 In managed grassland, the NEE (net ecosystem exchange of CO2) is calculated as: 84 ππΈπΈ = π β − πππ + π ππππππ (Eq. S5) (Eq. S6) 85 that can be simulated in ORCHIDEE-GM. A negative NEE value indicates the grassland is a 86 net sink of CO2 from the atmosphere. 87 The CH4 emission in field from enteric fermentation 88 FCH4-eco is CH4 emission from grazing livestock that can be simulated by ORCHIDEE-GM 89 (Vuichard et al., 2007a; Chang et al., 2013). 90 N2O emission from managed soil 91 The N2O emissions from managed soil are mainly due to the addition of nitrogen to grassland 92 as synthetic or organic fertilizer and by excreta from grazing livestock. It includes direct N2O 93 emissions from managed soil (FdirectN-N2Oeco), indirect N2O emissions from atmospheric 94 deposition of nitrogen volatilized from managed soils (FvolN-N2Oeco), and indirect N2O 95 emissions from nitrogen leaching/runoff from managed soils in regions where leaching/runoff 96 occurs (FleachN-N2Oeco): 97 πΉπ2 ππππ = πΉππππππ‘π−π2 ππππ + πΉπ£πππ−π2 ππππ + πΉππππβπ−π2 ππππ 98 All the N2O emissions were calculated following the IPCC Tier 1 algorithms (IPCC, 2006 99 Vol 4, Chapter 11, Eqns 11.1, 11.9 and 11.10). Direct N2O emissions from managed soil were (Eq. S7) 100 calculated as: 101 πΉππππππ‘π−π2 ππππ = (πΉππ + πΉππ ) × πΈπΉ1 + πΉππ π × πΈπΉ2 102 Indirect N2O emissions from atmospheric deposition of nitrogen volatilized from managed 103 soils are calculated as: 104 πΉπ£πππ−π2 ππππ = (πΉππ × πΉππππΊπ΄ππΉ + (πΉππ + πΉππ π ) × πΉππππΊπ΄ππ ) × πΈπΉ3 105 Indirect N2O emissions from nitrogen leaching/runoff from managed soils in regions where 106 leaching/runoff occurs are calculated as: (Eq. S8) (Eq. S9) 107 πΉππππβπ−π2 ππππ = (πΉππ + πΉππ + πΉππ π ) × πΉππππΏπΈπ΄πΆπ»−π» × πΈπΉ4 108 where: 109 FSN = annual amount of synthetic fertilizer nitrogen applied to soils; 110 FON = annual amount of animal manure, compost, sewage sludge and other organic nitrogen 111 additions applied to soils; 112 FPRP = annual amount of nitrogen deposited as urine and dung by grazing animals on 113 grassland; 114 FracGASF = fraction of synthetic fertilizer nitrogen that volatilizes as NH3 and NOx; 115 FracGASM = fraction of applied organic nitrogen fertilizer material (FON) and of nitrogen 116 deposited as urine and dung by grazing animals (FPRP) that volatilizes as NH3 and NOx; 117 FracLEACH-H = fraction of all nitrogen added to/mineralized in managed soils in regions where 118 leaching/runoff occurs that is lost through leaching and runoff; 119 EF1 = 0.01; EF2 = 0.02 for cattle, and 0.01 for sheep; EF3 = 0.01; EF4 = 0.0075; FracGASF = 120 0.10; FracGASM = 0.20; FracLEACH-H = 0.30. This study used the default values of these 121 parameters and emission factors from guidelines (IPCC, 2006 Vol 4, Chapter 11, Table 11.1 122 and 11.3); FSN and FON come from the gridded nitrogen addition map (see main text for 123 detail); FPRP can be calculated in ORCHIDEE-GM. It is noteworthy that Flechard et al. 124 (2007) reported a lower emission factor (0.0075 instead of 0.01 in IPCC, 2006) of direct N2O 125 emission from managed soil. 126 127 GHG fluxes at grassland ecosystem and farm scale (Eq. S10) 128 The off-site CO2, CH4 and N2O emissions from the digestion of harvested forage by livestock 129 and from manure management contribute to the net GHG balance (NGB) at ecosystem and 130 farm scale. NGB is then calculated as: 131 ππΊπ΅ = ππΊπΈ − πΉπΆπ2−ππππ − πΉπΆπ»4 −ππππ × πΊπππΆπ»4 − πΉπ2 π−ππππ × πΊπππ2 π (Eq. S11) 132 where FCO2-farm is the proportion of harvest C that is respired by ruminants or emitted as labile 133 C in CO2 fluxes; FCH4- 134 fermentation or from manure management; FN2O- farm is direct and indirect N2O emission from 135 manure management (based on IPCC, 2006). All the off-site CO2, CH4 and N2O emissions are 136 calculated at country scale rather than at the grid-cell scale at which the NGE calculations are 137 made. A positive value of NGB indicates a net GHG sink at ecosystem and farm scale. 138 Off-site CO2 fluxes 139 We assume that C exported from grasslands (as harvested biomass, Fharvest) has six 140 destinations: 1) losses during transportation then decomposed as CO2 fluxes (Fharvest-loss); 2) 141 respired by livestock as CO2 fluxes (Ranimal-farm); 3) exported as animal products (milk and 142 meat; Fmilk/LW-farm); 4) CH4 emission from enteric fermentation or from manure management 143 (FCH4-farm); 5) manure produced on-farm by the grass-fed livestock and returned to the field as 144 organic C (Freturn); 6) labile C in CO2 fluxes during manure management (Fmanure-labile). Thus 145 the off-site CO2 fluxes (FCO2-barn) can be calculated as: 146 πΉπΆπ2 −ππππ = πΉβπππ£ππ π‘−πππ π + π ππππππ−ππππ + πΉππππ’ππ−ππππππ 147 or 148 πΉπΆπ2 −ππππ = πΉβπππ£ππ π‘ − πΉπΆπ»4 −ππππ − πΉππππ/πΏπ−ππππ − πΉπππ‘π’ππ farm is the proportion of ingested C emitted as CH4 from enteric (Eq. S12) (Eq. S13) 149 where Fharvest is the C in harvested biomass simulated by ORCHIDEE-GM; FCH4-farm is the 150 off-site CH4 emissions that would be calculated later; Fmilk/LW-farm is the off-site C export 151 through milk and meat production. While the C export through animal products is not 152 determined and will be neglected in the calculation of grassland ecosystem C fluxes (see main 153 text), we consider this C export all happens off-site to avoid overestimating CO2 fluxes at 154 ecosystem and farm scale. Fmilk/LW-farm is given in Eqn A10, based on the amount of animal 155 products from statistics (FAOstat, 2013): 156 πΉππππ/πΏπ−ππππ = πππππ × π ππππ π −πππ × (ππΉππ‘ × πΆπΉππ‘ + πππ × πΆππ ) + πππππ‘ × π ππππ π −πππ × 157 πΆππππππ π 158 where Ymilk and Ymeat are the milk and meat production from statistics (FAOstat, 2013) 159 respectively; fFat and fPR is the fat and protein content in milk, respectively (default values of 160 fFat = 4% and fPR = 3.5% are used following the IPCC, 2006 page 10.60); CFat, CPR and Ccarcass 161 is the C content in fat, protein and animal carcass respectively. Values of CFat =70% and CPR 162 = 46% and Ccarcass =5.1% are derived from Byrne et al., 2007 with original value from Wells 163 (2001) for CFat and CPR; and Hammond et al. (1990) for Ccarcass; and Rgrass-fed is the ratio of 164 manure from grass-fed animals to total manure application, given by: 165 π ππππ π −πππ = ∑(ππ × πππππ π π ) / ∑ ππ 166 where Ni is numbers (LU) of beef cattle, dairy cows, sheep, and goats calculated from 167 FAOstat for each country (Appendix A); fgrassi is the grass fractions in the diet of each type 168 of animal, which are taken from literature at the scale of Western Europe, Eastern Europe and 169 USSR (Bouwman et al., 2005). As a result, the European annual mean C exported through 170 grass-fed ruminant milk and meat products is ca. 3.2 Tg C yr-1, with much less C in meat 171 products (ca. 0.3 Tg C yr-1) than in milk products (ca. 2.9 Tg C yr-1; all values above are the 172 averages for 1961-2010 and over the EU28 plus Norway and Switzerland). If considering (Eq. S14) (Eq. S15) 173 only the C export through grass-fed ruminant milk and meat products during grazing, it will 174 be less than 1.3 g C m-2 yr-1 over European grassland ecosystem (with ca. 190 days in the year 175 that livestock can be grazing outside in fields simulated in ORCHIDEE-GM, and averaged 176 over European grassland). 177 Freturn is given in Eqn S16, based on the assumption that organic fertilizer input to grasslands 178 (Finput in Eqn 6) come from manure of livestock fed by grass and by non-grass forage, and 179 their fractions in Finput is the fractions of grass and non-grass forage in livestock diet 180 (Bouwman et al., 2005): 181 πΉπππ‘π’ππ = πΉππππ’π‘ × π ππππ π −πππ 182 Off-site CH4 emissions 183 The off-site CH4 emissions come from enteric fermentation of livestock (FCH4-EFfarm) and from 184 manure management (FCH4-MMfarm), given by: 185 πΉπΆπ»4 −ππππ = πΉπΆπ»4 −πΈπΉππππ + πΉπΆπ»4 −ππππππ 186 The CH4 emission from enteric fermentation at farm (FCH4-EFfarm) is calculated as: 187 πΉπΆπ»4 −πΈπΉππππ = πΉπΆπ»4 −πππ × (1 − πππππ§πππ )⁄365 188 where Tgrazing is the number of days of livestock grazing outside in fields simulated in 189 ORCHIDEE-GM. The total CH4 emission from manure management (FCH4-MM) in each 190 country can be calculated with livestock numbers following the IPCC Tier 1 algorithms 191 (IPCC, 2006 Vol 4, Chapter 10, Eqn 10.22), but depending on livestock types as well as 192 temperature: 193 πΉπΆπ»4 −ππ = ππ × πΈπΉ5(π) (Eq. S16) (Eq. S17) (Eq. S18) (Eq. S19) 194 where EF5(i) is the emission factor for CH4 emitted from manure management (kg CH4 head-1 195 yr-1) depending on livestock types as well as temperature (IPCC, 2006 Vol 4, Chapter 10, 196 Table 10.14); Ni is livestock numbers (head) of beef cattle, dairy cows, sheep, and goats 197 calculated from FAO statistics for each country. Then for each country, the actual CH4 198 emission from manure management that happens while animals are at-barn can be calculated 199 as: 200 πΉπΆπ»4 −ππππππ = πΉπΆπ»4 −ππ × πΉπΆπ»4 −πΈπΉππππ ⁄(πΉπΆπ»4 −πΈπΉππππ + πΉπΆπ»4 −πππ )(Eq. S20) 201 Usually, the CH4 emissions from manure management are only around 12% of the CH4 from 202 enteric fermentation. 203 Off-site N2O emissions from manure management 204 Following the IPCC Tier 1 algorithms (IPCC, 2006 Vol 4, Chapter 10), the N2O can be 205 directly emitted from manure management (FdirectN-N2Ofarm), indirectly emitted due to 206 volatilization of N from manure management (FvolN-N2Ofarm), and indirectly emitted due to 207 leaching/runoff from manure management in regions where leaching/runoff occurs (FleachN- 208 N2Ofarm): 209 πΉπ2 π−ππππ = (πΉππππππ‘π−π2 πππ + πΉπ£πππ−π2 πππ + πΉππππβπ−π2 πππ ) × πππππ (Eq. S21) 210 Where ffarm is the weighted fraction of the number of days that livestock are fed by harvested 211 forage from grasslands (at-barn) at country scale, and is given by: 212 πππππ = 1 − ∑(π·π × πππππ§πππ(π) × π΄π )⁄∑(π·π × 365 × π΄π ) 213 Where Dp is optimal livestock density from ORCHIDE-GM in grid cell p in the given 214 country; Tgrazing(p) is the number of days of livestock grazing on pasture in grid cell p in the (Eq. S22) 215 given country simulated in ORCHIDEE-GM; and Ap is the area of grid cell p in the given 216 country. 217 All the N2O emissions are calculated following the IPCC Tier 1 algorithms (IPCC, 2006 Vol 218 4, Chapter 10, Eqn 10.25). Direct N2O emission from manure management is calculated as: 219 πΉππππππ‘π−π2 πππ = ∑(πππ₯π × πΈπΉ6 × ππ × πππ ) 220 where Ni is livestock numbers (head) of beef cattle, dairy cows, sheep, and goats calculated 221 from FAO statistics for each country; MSi is the fraction of total annual nitrogen excretion 222 that is managed in the manure management system; EF6 is the emission factor for direct N2O 223 emissions from the manure management system (kg N-N2O per kg N in manure management 224 system). Almost all the management system on European farms are solid storage or liquid 225 slurry with a natural crust cover, when the manure is not deposited on pasture (IPCC, 2006 226 Vol 4, Chapter 10, Table 10A.4 and 10A.5), thus the MSi =100% and EF6 = 0.005 is used in 227 this study. Nexi is annual average nitrogen excretion (kg N animal-1 yr-1), which is calculated 228 as (IPCC, 2006 Vol 4, Chapter 10, Eqn 10.30): 229 πππ₯π = (ππππ‘π(π) × ππ΄ππ ⁄1000) × 365 230 where Nrate(i) is daily nitrogen excretion rate (kg N per 1000 kg animal mass), and TAMi is 231 typical animal mass for livestock category (kg per animal). The default value of Nrate(i) and 232 TAMi are adopted from IPCC, 2006 (Vol 4, Chapter 10, Table 10.19, and Table 10A-4 to 233 Table 10A-9). Indirect N2O emission due to volatilization from manure management is 234 calculated as (IPCC, 2006 Vol 4, Chapter 10, Eqn 10.26): 235 πΉπ£πππ−π2 πππ = ∑(πππ₯π × πΉππππππ (π) × ππ × πΈπΉ7 ) 236 where Fracgas(i) is percentage of managed manure nitrogen for livestock category that 237 volatilises as NH3 and NOx in the manure management system (default value for each type of (Eq. S23) (Eq. S24) (Eq. S25) 238 livestock is derived from IPCC, 2006 Vol 4, Chapter 10, Table 10.22); EF7 is emission factor 239 for N2O emissions from atmospheric deposition of nitrogen on soils and water surfaces given 240 as the same default value of EF3 with 0.01 kg N2O-N per kg of NH3-N+NOx-N volatilised. 241 Indirect N2O emission due to leaching from manure management systems is calculated as 242 (IPCC, 2006 Vol 4, Chapter 10, Eqn 10.28): 243 πΉππππβπ−π2 πππ = ∑(πππ₯π × πΉπππππππβ(π) × ππ × πΈπΉ8 ) 244 where Fracleach(i) is percent of managed manure nitrogen losses for livestock category due to 245 runoff and leaching during solid and liquid storage of manure (typical range 1%-20%; 5% is 246 used in this study); EF8 is emission factor for N2O emissions from nitrogen leaching and 247 runoff given as the same default value of EF4 with 0.0075 kg N-N2O per kg of N 248 leaching/runoff. 249 (Eq. S26) 250 Text S3. Grid point selection for NBP uncertainty analysis 251 Complete simulations (as described in the main text), including a 10,000-year spin-up 252 simulation to reach equilibrium for carbon pools and a 110-year simulation for the period of 253 1901 to 2010, with the 16 factor combinations at full geographical scale (9237 grid points) 254 would require far more computational time than was available to this study. Thus for the 255 uncertainty analysis, we have made a series of simulations for a small sub-sample of grid 256 points. Importantly, the grid points should represent the spatial distribution, magnitude and 257 interannual variability of the grasslands’ NBP. We carried out a series of selection processes 258 which picked grid points with regular latitude / longitude intervals (from 0.25° to 3°, which is 259 1 to 12 times the spatial resolution used in the main study). As a result, 12 groups of grid 260 points that were evenly spread across the study area were selected with 58 to 2309 grid points 261 over the study area (Table S2; Fig. S3 as an example). For each group, the NBP of the 262 corresponding grid points were extracted and averaged, the results were then compared with 263 those at full geographical scale of 9237 grid points (control group). Figure S4 shows the 264 differences in average NBP (with respect to the magnitude of NBP) and the correlation 265 coefficient between NBP time series from all grids (control group) and from each group of 266 grid points (with respect to interannual variability of NBP). 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