Publications Enabled by Open Science Grid July 2009 - June 2010 June 2010 Appendix 3 Page 1 Contents Accelerator Physics Virtual Organization..................................................................................................... 3 ATLAS Virtual Organization ....................................................................................................................... 3 CDF Virtual Organization........................................................................................................................... 15 CDMS Virtual Organization ....................................................................................................................... 21 CIGI Virtual Organization .......................................................................................................................... 21 CMS Virtual Organization .......................................................................................................................... 22 DZero Virtual Organization ........................................................................................................................ 29 ENGAGE Virtual Organization .................................................................................................................. 32 GLOW Virtual Organization ...................................................................................................................... 34 HCC Virtual Organization .......................................................................................................................... 40 LIGO Collaboration .................................................................................................................................... 40 MiniBooNE Virtual Organization ............................................................................................................... 43 MINOS Virtual Organization ..................................................................................................................... 44 NanoHUB Virtual Organization ................................................................................................................. 44 NYSgrid Virtual Organization .................................................................................................................... 45 SBgrid Virtual Organization ....................................................................................................................... 45 STAR Virtual Organization ........................................................................................................................ 46 June 2010 Appendix 3 Page 2 Accelerator Physics Virtual Organization 1) Beam physics of the 8-GeV H- linac, Jean-Paul Carneiro, B. Mustapha, and P.N. Ostroumov, Nuclear Instruments and Methods in Physics Research A, 606 (2009) 271 – 280. 2) Numerical simulations of stripping effects in high-intensity hydrogen ion linacs, J.-P. Cameiro, B. Mustapha, and P.N. Ostroumov, Phys. Rev. Special Topics - Accelerators and Beams 040102 (2009). ATLAS Virtual Organization 1) Relative luminosity measurement of the LHC with the ATLAS forward calorimeter. By A. Afonin, et al., JINST 5:P05005,2010,. [arXiv:1005.1784] 2) The ATLAS discovery reach for SUSY models with early data. By Janet Dietrich & for the ATLAS collaboration. [arXiv:1005.2034] (May 2010) 4p. 3) Herschel ATLAS: The angular correlation function of submillimetre galaxies at high and low redshift. By S.J. Maddox, et al., [arXiv:1005.2406] (May 2010) 5p. 4) Herschel ATLAS: The cosmic star formation history of quasar host galaxies. By S. Serjeant, et al., [arXiv:1005.2410] (May 2010) 5) Commissioning of the ATLAS Liquid Argon Calorimeter. By S. Laplace. Nucl.Instrum.Meth. A617:30-34,2010,. [arXiv:1005.2935] 6) A search for debris disks in the Herschel ATLAS. By M.A. Thompson, et al., [arXiv:1005.3018] (May 2010) 5p. 7) Wide-angle tail galaxies in ATLAS. By Minnie Y. Mao, Rob Sharp, D.J. Saikia, Ray P. Norris, Melanie Johnston-Hollitt, Enno Middelberg, Jim E.J. Lovell. [arXiv:1005.3649] (May 2010) 15p. 8) Collective flow in (anti)proton-proton collision at Tevatron and LHC. By Tanguy Pierog, Sarah Porteboeuf, Iurii Karpenko, Klaus Werner. [arXiv:1005.4526] (May 2010) 4p. June 2010 Appendix 3 Page 3 9) The ATLAS Simulation Infrastructure. By The ATLAS Collaboration. [arXiv:1005.4568] (May 2010) 10) Performance of the ATLAS Detector using First Collision Data. By The ATLAS Collaboration. [arXiv:1005.5254] (May 2010) 11) Readiness of the ATLAS detector: Performance with the first beam an d cosmic data. By Francesca Pastore. Nucl.Instrum.Meth.A617:48-51,2010,. 12) Prospects for Observing the Standard Model Higgs Boson Decaying into b\bar{b} Final States Produced in Weak Boson Fusion with an Associated Photon at the LHC. By D.M. Asner, M. Cunningham, S. Dejong, K. Randrianarivony, C. Santamarina, M. Schram. [arXiv:1004.0535] (Apr 2010) 15p. 13) Theoretical spectra of photoevaporating protoplanetary discs: An atlas of atomic and lowionisation emission lines. By Barbara Ercolano & James E. Owen. [arXiv:1004.1203] (Apr 2010) 18p. 14) The ATLAS Inner Detector commissioning and calibration. By ATLAS Collaboration [arXiv:1004.5293] (Apr 2010) 34p. 15) Identification of muons in ATLAS. By Zdenko van Kesteren. (Mar 2010) 159p. 16) LHC Detectors and Early Physics. By Guenther Dissertori. [arXiv:1003.2222] (Mar 2010) 17) Charged-particle multiplicities in pp interactions at sqrt(s) = 900 GeV measured with the ATLAS detector at the LHC. By ATLAS Collaboration Phys Lett B 688, 2010, Issue 1, 21-42, Phys.Lett.B688:21-42,2010,. [arXiv:1003.3124] 18) Higgs Boson Search Sensitivity in the $H \to WW$ Dilepton Decay Mode at $\sqrt s = 7$ and 10 TeV. By Edmond L. Berger, Qing-Hong Cao, C.B. Jackson, Tao Liu, Gabe Shaughnessy. [arXiv:1003.3875] ANL-HEP-PR-10-8 (Mar 2010) 19) Topics in the measurement of top quark events with ATLAS: Pixel detector optoelectronics, track impact parameter calibration, acceptance correction methods. June 2010 Appendix 3 Page 4 By Stephan A. Sandvoss. (Mar 2010) 170p. 20) Expected Performance of the ATLAS Detector in GMSB Models with Tau Final States. By Dorthe Ludwig & for the ATLAS collaboration. PoS HCP2009:073,2009,. [arXiv:1002.0944] 21) Commissioning and early physics analysis with the ATLAS and CMS experiments. By Andreas Hoecker. [arXiv:1002.2891] (Feb 2010) 84p. 22) QCD and Electroweak Physics at LHC. By Klaus Rabbertz. PoS RADCOR2009:016,2009,. [arXiv:1002.3628] 23) Drift Time Measurement in the ATLAS Liquid Argon Electromagnetic Calorimeter using Cosmic Muons. By The ATLAS Collaboration. [arXiv:1002.4189] (Feb 2010) 30p. 24) An all-sky Atlas of Radio/X-ray Associations. By Eric Flesch. [arXiv:1001.0071] (Jan 2010) 6p. 25) Spirals, Bridges, and Tails: A GALEX UV Atlas of Interacting Galaxies. By Beverly J. Smith, Mark L. Giroux, Curtis Struck, Mark Hancock, Sabrina Hurlock. [arXiv:1001.0989] (Jan 2010) 26) Search for Supersymmetry in Trilepton Final States with the ATLAS Detector and the Alignment of the ATLAS Silicon Tracker. By Oleg Brandt. [arXiv:1001.1365] (Jan 2010) 236p. 27) The Hunt for New Physics at the Large Hadron Collider. By P. Nath, et al., Nucl.Phys.Proc.Suppl.200-202:185-417,2010,. [arXiv:1001.2693] 28) B Physics and Quarkonia studies with early ATLAS data. By for the ATLAS Collaboration [arXiv:1001.3806] ATL-PHYS-PROC-2010-006 (Jan 2010) 29) NLO QCD corrections to top anti-top bottom anti-bottom production at the LHC: 2. full hadronic results. By Axel Bredenstein, Ansgar Denner, Stefan Dittmaier, Stefano Pozzorini. JHEP 1003:021,2010,. [arXiv:1001.4006] June 2010 Appendix 3 Page 5 30) A Spitzer Space Telescope far-infrared spectral atlas of compact sources in the Magellanic Clouds. II. The Small Magellanic Cloud. By Jacco Th. van Loon, Joana M. Oliveira, Karl D. Gordon, G.C. Sloan, C.W. Engelbracht. Astron.J.139:1553-1565,2010,. [arXiv:1001.4487] 31) The construction and testing of the silicon position sensitive modules for the LHCf experiment at CERN. By O. Adriani, et al., JINST 5:P01012,2010,. 32) Micromegas study for the sLHC environment. By T. Alexopoulos, et al., JINST 5:P02003,2010,. 33) Atlas TRT: Research & design B-type module mass production. By Yu.V. Gusakov, et al., Phys.Part.Nucl.41:1-26,2010,. 34) New developments in data-driven background determinations for SUSY searches in ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:297-300,2010,. 35) Prospects for the discovery of supersymmetry based on inclusive searches in ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:301-304,2010,. 36) Multi-lepton SUSY searches with the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:305-308,2010,. 37) Search for dilepton and lepton + E(T)**miss resonances at high mass with ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:309-312,2010,. 38) Reconstruction of tau leptons and prospects for SUSY in ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:341-344,2010,. 39) Exclusive measurements for SUSY events with the ATLAS detector at the LHC. By ATLAS Collaboration AIP Conf.Proc.1200:345-348,2010,. 40) R-parity violation with jet signatures at the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:354-357,2010,. June 2010 Appendix 3 Page 6 41) Signatures of GMSB with non-pointing photons at the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:362-365,2010,. 42) Associated standard model Higgs boson search with ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:378-381,2010,. 43) Inclusive standard model Higgs boson searches in ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:382-385,2010,. 44) Beyond the standard model Higgs searches at ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:394-397,2010,. 45) SM Higgs properties measurement at ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:402-405,2010,. 46) Search for resonances decaying into top quark pairs with ATLAS. By ATLAS Collaboration AIP Conf.Proc.1200:678-681,2010,. 47) Electron reconstruction and identification with the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:693-696,2010,. 48) Photon reconstruction and identification with the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:697-700,2010,. 49) In-situ determination of the ATLAS muon performance. By ATLAS Collaboration AIP Conf.Proc.1200:705-708,2010,. 50) Search for new physics with long-lived particles. By ATLAS Collaboration AIP Conf.Proc.1200:742-745,2010,. 51) Reconstruction and identification of heavy long-lived particles at the ATLAS detector at the LHC. By ATLAS Collaboration AIP Conf.Proc.1200:762-765,2010,. June 2010 Appendix 3 Page 7 52) Prospects for early discoveries at the LHC with dileptons, jets and no missing energy with the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:802-805,2010,. 53) Study of a micromegas chamber in a neutron beam. By T. Alexopoulos, et al., JINST 5:P02005,2010,. 54) Measurement of the response of the ATLAS liquid argon barrel calorimeter to electrons at the 2004 combined test-beam. By M. Aharrouche, et al., Nucl.Instrum.Meth.A614:400-432,2010,. 55) The ATLAS muon spectrometer. By Giora Mikenberg. Mod.Phys.Lett.A25:649-667,2010,. 56) How physics defines the LHC environment and detectors. By D. Green. Int.J.Mod.Phys.A25:1279-1313,2010,. 57) Higgs physics with ATLAS. By ATLAS Collaboration Nucl.Phys.Proc.Suppl.198:149-156,2010,. 58) The hybrid tracking system of ATLAS. By Leonardo Rossi. Int.J.Mod.Phys.A25:1519-1540,2010,. 59) The ATLAS electromagnetic calorimeters: Features and performance. By Luciano Mandelli. Int.J.Mod.Phys.A25:1739-1760,2010,. 60) ATLAS electronics: An overview. By Philippe Farthouat. Int.J.Mod.Phys.A25:1761-1784,2010,. 61) TileCal: The hadronic section of the central ATLAS calorimeter. By K. Anderson, T. Del Prete, E. Fullana, J. Huston, C. Roda, R. Stanek. Int.J.Mod.Phys.A25:1981-2003,2010,. 62) Readiness of the ATLAS Liquid Argon Calorimeter for LHC Collisions By ATLAS Collaboration [arXiv:0912.2642] (Dec 2009) 31p. June 2010 Appendix 3 Page 8 63) Neutron Production and ZDC Acceptance. By Sebastian White. [arXiv:0912.4320] (Dec 2009) 11p. 64) Prospects for R-Parity Conserving SUSY searches at the LHC. By CMS Collaboration [arXiv:0912.4378] (Dec 2009) 5p. 65) The ATLAS transition radiation detector (TRT) Fast-OR trigger. By S. Fratina, et al., ATL-INDET-PUB-2009-002 (Dec 2009) 21p. 66) ATLAS Pixel Radiation Monitoring with HVPP4 System. By Igor Gorelov, Martin Hoeferkamp, Sally Seidel, Konstantin Toms. [arXiv:0911.0128] (Nov 2009) 8p. 67) Forward jets physics in ATLAS, CMS and LHCb. By David d'Enterria. [arXiv:0911.1273] (Nov 2009) 6p. 68) Charmonium production at the LHC. By Magdalena Malek. [arXiv:0911.1522] (Nov 2009) 8p. 69) A Layer Correlation Technique for Pion Energy Calibration at the 2004 ATLAS Combined Beam Test. By ATLAS Liquid Argon Collaboration [arXiv:0911.2639] (Nov 2009) 7p. 70) Optical Link ASICs for the LHC Upgrade. By K.K. Gan, H.P. Kagan, R.D. Kass, J.R. Moore, D.S. Smith. [arXiv:0911.4305] (Nov 2009) 3p. 71) A Detailed Far-Ultraviolet Spectral Atlas of Main Sequence B Stars. By Myron A. Smith. Astrophys.J.Suppl.186:175-190,2010,. [arXiv:0911.4747] 72) Characterization of 3D-DDTC detectors on p-type substrates. By Gian-Franco Dalla Betta, et al., [arXiv:0911.4864] (Nov 2009) 8p. 73) The Data acquisition and calibration system for the ATLAS Semiconductor Tracker. By Tom Barber. Conference Record of the 16th IEEE NPSS Real Time Conference 2009 (RT 2009), pp 465-471. June 2010 Appendix 3 Page 9 74) ATLAS silicon microstrip tracker operation. By P. Vankov. Proceedings of the Topical Workshop on Electronics for Particle Physics (TWEPP-09), pp 553556. 75) Scalable Database Access Technologies for ATLAS Distributed Computing. By ATLAS Collaboration [arXiv:0910.0097] ANL-HEP-CP-09-085 (Oct 2009) 6p. 76) Discovery Potential of the Standard Model Higgs Boson Through H -> WW Decay Mode with the ATLAS Detector at LHC. By ATLAS Collaboration [arXiv:0910.0193] (Oct 2009) 8p. 77) Diamond Prototypes for the ATLAS SLHC Pixel Detector. By RD42 Collaboration [arXiv:0910.0347] (Oct 2009) 3p. 78) Searches for SUSY with the ATLAS detector. By ATLAS Collaboration AIP Conf.Proc.1200:32-40,2010,. [arXiv:0910.0559] 79) Results from the Commissioning of the ATLAS Pixel Detector with Cosmic data. By ATLAS Collaboration [arXiv:0910.0847] (Oct 2009) 9p. 80) Measurement of the Z boson transverse momentum spectrum on ATLAS with early data. By Lashkar Kashif. [arXiv:0910.0910] (Oct 2009) 6p. 81) Development of FTK architecture: a fast hardware track trigger for the ATLAS detector. By A. Annovi, et al., [arXiv:0910.1126] (Oct 2009) 82) Standard Model $H \gamma \gamma$ discovery potential with ATLAS. By Yaquan Fang & for the ATLAS Collaboration. [arXiv:0910.2149] (Oct 2009) 5p. 83) Performance of the ATLAS Detector on First Single Beam and Cosmic Ray Data. By Martin Aleksa. AIP Conf.Proc.1200:689-692,2010,. [arXiv:0910.2198] 84) ATLAS Sensitivity to Leptoquarks, W(R) and Heavy Majorana Neutrinos in Final States with High-p(T) Dileptons and Jets with Early LHC Data at 14-TeV proton-proton collisions. By Vikas Bansal. [arXiv:0910.2215] (Oct 2009) 6p. June 2010 Appendix 3 Page 10 85) Track and vertex reconstruction in the ATLAS inner detector. By M. Limper. Amsterdam, Netherlands: Eigenverl. (2009) 164 p Amsterdam, Netherlands: Eigenverl. (2009) 164 p. 86) ATLAS Muon Detector Commissioning. By ATLAS Muon Collaboration [arXiv:0910.2767] (Oct 2009) 6p. 87) ATLAS Great Lakes Tier-2 Computing and Muon Calibration Center Commissioning. By Shawn McKee. [arXiv:0910.2878] (Oct 2009) 6p. 88) Search for Supersymmetry Signatures at the LHC. By ATLAS Collaboration [arXiv:0910.2964] (Oct 2009) 10p. 89) Commissioning of the ATLAS Liquid Argon Calorimeters. By ATLAS Liquid Argon Collaboration AIP Conf.Proc.1182:184-187,2009,. [arXiv:0910.2991] 90) The ATLAS Detector: Status and Results from Cosmic Rays. By James T. Shank. [arXiv:0910.3081] (Oct 2009) 6p. 91) A Spitzer Space Telescope far-infrared spectral atlas of compact sources in the Magellanic Clouds. I. The Large Magellanic Cloud. By Jacco Th. van Loon, et al., Astron.J.139:68-95,2010,. [arXiv:0910.3339] 92) Discovery Potential for Di-lepton and Lepton+Etmiss Resonances at High Mass with ATLAS. By ATLAS Collaboration [arXiv:0910.3378] (Oct 2009) 6p. 93) Measurement of the W + jets and Z + jets Cross Section with the ATLAS detector. By ATLAS Collaboration [arXiv:0910.3382] (Oct 2009) 4p. 94) Search for Contact Interactions in the Dimuon Final State at ATLAS. By E.N. Thompson, S. Willocq, K.M. Black. [arXiv:0910.3384] (Oct 2009) 4p. 95) Prospects for measuring t anti-t production cross-section at s**(1/2) =10-TeV using the likelihood method with the ATLAS detector. June 2010 Appendix 3 Page 11 By Dilip Jana. [arXiv:0910.3431] (Oct 2009) 6p. 96) 12co(J=1-0) on-the-Fly Mapping Survey of the Virgo Cluster Spirals. I. Data and Atlas. By E.J. Chung, M.-H. Rhee, H. Kim, M.S. Yun, M. Heyer, J.S. Young. Astrophys.J.184:199C,2009,. [arXiv:0910.3465] 97) Development of 3D-DDTC pixel detectors for the ATLAS upgrade. By Gian-Franco Dalla Betta, et al., [arXiv:0910.3629] (Oct 2009) 20p. 98) Preliminary results of 3D-DDTC pixel detectors for the ATLAS upgrade. By Alessandro La Rosa, et al., [arXiv:0910.3788] (Oct 2009) 8p. 99) Single-Top Cross Section Measurements at ATLAS. By ATLAS Collaboration [arXiv:0910.3824] ATL-COM-PHYS-2009-468 (Oct 2009) 2p. 100) Top quark pair cross section prospects in ATLAS. By ATLAS Collaboration [arXiv:0910.3930] (Oct 2009) 5p. 101) Discovery Potential for GMSB Supersymmetry in ATLAS using the Z gamma + not E(T) Final State at a center of mass energy of s**(1/2) = 10-TeV. By ATLAS Collaboration [arXiv:0910.4062] (Oct 2009) 6p. 102) The Herschel ATLAS. By S. Eales, et al., [arXiv:0910.4279] (Oct 2009) 103) Tau physics at the LHC with ATLAS. By ATLAS Collaboration [arXiv:0910.4727] ATL-PHYS-PROC-2009-126 (Oct 2009) 6p. 104) Alignment of the ATLAS Inner Detector Tracking System. By ATLAS Collaboration [arXiv:0910.5156] (Oct 2009) 7p. 105) Measuring Central Exclusive Processes at LHC. By Marek Tasevsky. [arXiv:0910.5205] (Oct 2009) 8p. 106) ScotGrid: Providing an Effective Distributed Tier-2 in the LHC Era. By Sam Skipsey, David Ambrose-Griffith, Greig Cowan, Mike Kenyon, Orlando Richards, Phil June 2010 Appendix 3 Page 12 Roffe, Graeme Stewart. J.Phys.Conf.Ser.219:052014,2010,. [arXiv:0910.4507] 107) The reach of the ATLAS experiment in SUSY parameter space. By for the ATLAS collaboration Balk.Phys.Lett.16:86-89,2009,. [arXiv:0910.5602] 108) ATLAS SUSY search prospects at 10-TeV. By ATLAS Collaboration [arXiv:0910.5653] (Oct 2009) 4p. 109) The ATLAS muon spectrometer: Commissioning and tracking. By Jochem Snuverink. (Oct 2009) 125p. 110) Study of GMSB models with photon final states using the ATLAS detector. By Mark Terwort. DESY-THESIS-2009-033 (Oct 2009) 145p. 111) Measurements from supersymmetric events. By ATLAS Collaboration ATL-PHYS-PUB-2009-067 (Oct 2009) 27p. 112) Design and performance of the ABCN-25 readout chip for ATLAS inner detector upgrade. By W. Dabrowski, et al., IEEE Nucl.Sci.Symp.Conf.Rec.2009:373-380, 2009,. 113) Searches for the Higgs boson at the LHC. By Marco Delmastro. [arXiv:0909.0493] (Sep 2009) 4p. 114) VIVA, VLA Imaging of Virgo spirals in Atomic gas: I. The Atlas & The HI Properties. By Aeree Chung, J.H. van Gorkom, Jeffrey D.P. Kenney, Hugh Crowl, Bernd Vollmer. [arXiv:0909.0781] (Sep 2009) 28p. 115) Discovery Potential of R-hadrons with the ATLAS Detector at the LHC. By ATLAS Collaboration AIP Conf.Proc.1200:750-753,2010,. [arXiv:0909.1911] 116) On the possibility to use ATLAS and CMS detectors for neutrino physics. By A. Guskov. [arXiv:0909.2513] (Sep 2009) 4p. 117) 'Atlas of Secular Light Curves of Comets'. By Ignacio Ferrin. [arXiv:0909.3498] (Sep 2009) June 2010 Appendix 3 Page 13 118) The ATLAS Survey of the CDFS and ELAIS-S1 Fields. By E. Lenc, R. Norris, A. Hopkins, R. Sharp, M. Huynh, M. Mao, E. Middelberg, K. Randall. [arXiv:0909.3669] (Sep 2009) 4p. 119) Distinguishing between AGN and Star-Forming Galaxies in ATLAS. By Kate E. Randall, Andrew M. Hopkins, Ray P. Norris, Minnie Y. Mao. [arXiv:0909.3898] (Sep 2009) 3p. 120) Cosmic Evolution of Radio Sources in ATLAS. By Minnie Y. Mao, Ray P. Norris, Rob Sharp, Jim E.J. Lovell. ASP Conf.Ser.408:380,2009,. [arXiv:0909.4114] 121) Fake E-slash(T) from Calorimeter Effects. By ATLAS Collaboration [arXiv:0909.4152] ATL-PHYS-PROC-2009-088 (Sep 2009) 2p. 122) Determination of QCD Backgrounds in ATLAS: A Challenge for SUSY searches. By Bernhard Meirose. AIP Conf.Proc.1200:717-720,2010,. [arXiv:0909.4427] 123) The Software of the ATLAS beam pick-up based LHC monitoring system. By C. Ohm & T. Pauly. J.Phys.Conf.Ser.219:022040,2010,. [arXiv:0909.5378] 124) An HV power supply system for the transition radiation tracker of the ATLAS experiment. By K.I. Zhukov, V.A. Kantserov, S.V. Muravev, A.P. Shmeleva. Instrum.Exp.Tech.52:673-677,2009, Prib.Tekh.Eksp.5:66-71,2009,. 125) AINUR: Atlas of Images of NUclear Rings. By S. Comeron, J.H. Knapen, J.E. Beckman, E. Laurikainen, H. Salo, I. Martinez-Valpuesta, R.J. Buta. [arXiv:0908.0272] (Aug 2009) 126) Temperature Studies for ATLAS MDT BOS Chambers. By A. Engl, R. Hertenberger, O. Biebel, R. Mameghani, D. Merkl, F. Rauscher, D. Schaile, R. Strohmer. NSS Conf. Rec. 2008, 2274-2277. [arXiv:0908.1541] 127) ATLAS Monitored Drift Tube Chambers in E = 11 MeV Neutron Background. By T. Muller, A. Mlynek, O. Biebel, R. Hertenberger, T. Nunnemann, D. Merkl, F. Rauscher, D. Schaile, R. Strohmer. [arXiv:0908.1562] (Aug 2009) 4p. 128) ATLAS monitored drift tube chambers for super-LHC. By Albert Engl, Otmar Biebel, Ralf Hertenberger, Alexander Mlynek, Thomas A. Mueller, Felix June 2010 Appendix 3 Page 14 Rauscher. [arXiv:0908.2507] (Aug 2009) 3p. 129) A Spitzer high resolution mid-infrared spectral atlas of starburst galaxies. By J. Bernard-Salas, et al., Astrophys.J.Suppl.184:230-247,2009,. [arXiv:0908.2812] 130) An Atlas of GALEX UV Images of Interacting Galaxies. By Mark L. Giroux, Beverly J. Smith, Curtis Struck, Mark Hancock, Sabrina Hurlock. [arXiv:0908.3712] (Aug 2009) 4p. 131) Atlas of Vega: 3850 -- 6860 \AA. By Hyun-Sook Kim, Inwoo Han, G. Valyavin, Byeong- Cheol Lee, V. Shimansky, G.A. Galazutdinov. [arXiv:0908.4081] (Aug 2009) 9p. 132) Study of the response of the ATLAS central calorimeter to pions of energies from 3 to 9 GeV. By E. Abat, et al., Nucl.Instrum.Meth.A607:372-386,2009,. 133) Upgrading the ATLAS barrel tracker for the super-LHC. By R.L. Bates. Nucl.Instrum.Meth.A607:24-26,2009,. 134) Commissioning the ATLAS silicon microstrip tracker. By C. Escobar. Nucl.Instrum.Meth.A607:21-23,2009,. CDF Virtual Organization 1. Search for Single Top Quark Production in p anti-p Collisions at 1.96 TeV in the Missing Transverse Energy Plus Jets Topology. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D81, 072003 (2010). arXiv: 1001.4577. 2. Measurement of Z_gamma Production in p anti-p Collisions at s**(1/2) 1.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. D April 7, 2010. FermilabPub-10-073-E. arXiv: 1004.1140. 3. A Search for the Higgs Boson Using Neural Networks in Events with Missing Energy and bquark Jets in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 141801 (2010). arXiv: 0911.3935. June 2010 Appendix 3 Page 15 4. Measurement of the B- Lifetime Using a Simulation Free Approach for Trigger Bias Correction. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. D April 27, 2010. Fermilab-Pub-10-095-E. arXiv: 1044.4855. 5. Measurement of the b-jet Cross Section in Events with a W Boson in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 131801 (2010). arXiv: 0909.1505. 6. Observation of Single Top Quark Production and Measurement of |V(tb)| with CDF. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. D April 7, 2010. FermilabPub-10-063-E. arXiv: 1004.1181. 7. First Measurement of the Ratio sigma_tt-bar/sigma_Z/gamma* --> ell ell and Precise Extraction of the tt-bar Cross Section. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. April 19, 2010. Fermilab-Pub-10-084-E. arXiv: 1004.3224. 8. Search for R-parity Violating Decays of tau Sneutrinos to e mu, mu tau, and e tau Pairs in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. April 19, 2010. Fermilab-Pub-10-077-E. arXiv: 1004.3042. 9. Measurement of W-Boson Polarization in Top-quark Decay in p anti-p Collisions at sqrt 1.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. March 1, 2010. Fermilab-Pub-10-041-E. arXiv: 1003.0224. 10. Measurement of the Top Quark Mass and p anti-p --> tt-bar Cross Section in the AllHadronic Mode with the CDF II Detector. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D81, 052001 (2010). arXiv: 1002.0365. 11. Measurement of the WW+WZ Production Cross Section using Lepton+Jets Final State at CDF II. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 101801 (2010). arXiv: 0911.4449. 12. Search for New Bottomlike Quark Pair Decays QQ- --> (t W-/+)(t-bar W+/-) in SameCharge Dilepton Events. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 091801 (2010). arXiv: 0912.1057. 13. Search for Technicolor Particles Produced in Association with a W Boson at CDF. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. 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Measurement of d sigma/dy of Drell-Yan e+e- Pairs in the Z Mass Region from p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Physics Letters B March 29, 2010. Fermilab-Pub-10-057-E. arXiv: 0908.3914. 19. Measurement of the Top Pair Production Cross Section in the Dilepton Decay Channel in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. D February 15, 2010. Fermilab-Pub-10-032-E. arXiv: 1002.2919. 20. Measurement of the Top Quark Mass in the Dilepton Channel Using m_t2 at CDF. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D81, 031102 (2010). arXiv: 0911.2956. 21. Inclusive Search for Standard Model Higgs Boson Production in the WW Decay Channel Using the CDF II Detector. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 061803 (2010). arXiv: 1001.4468. 22. Measurement of the tt-bar Production Cross Section in p anti-p Collisions at s**(1/2) \ufffd.96 TeV using Soft Electron b-Tagging. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D81, 092002 (2010). arXiv: 1002.3783. 23. Search for Supersymmetry with Gauge-Mediated Breaking in Diphoton Events with Missing Transverse Energy at CDF II. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 104, 011801 (2010). arXiv: 0910.3606. 24. Combination of Tevatron Searches for the Standard Model Higgs Boson in the W+W- Decay Mode. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. January 25, 2010. Fermilab-Pub-10-017-E. arXiv: 1001.4162. 25. Measurement of the W+W- Production Cross Section and Search for Anomalous WWgamma and WWZ Couplings in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. December 22, 2009. Fermilab-Pub-09-635E. arXiv: 0912.4691 June 2010 Appendix 3 Page 17 26. Search for Pair Production of Supersymmetric Top Quarks in Dilepton Events from p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. December 7, 2009. Fermilab-Pub-09-614-E. 27. Measurement of the Inclusive Isolated Prompt Photon Cross Section in p anti-p Collisions at s**(1/2) \ufffd.96 TeV using the CDF Detector. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 11106 (2009). arXiv: 0910.3623. 28. A Search for the Associated Production of the Standard Model Higgs Boson in the AllHadronic Channel. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 221801 (2009). arXiv: 0907.0810. 29. Search for New Physics with a Dijet plus Missing E(t) Signature in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. Lett. December 23, 2009. Fermilab-Pub-09-635-E. arXiv: 0912.4691. 30. Search for New Color-Octet Vector Particle Decaying to t anti-t in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Lett. B November 16, 2009. Fermilab-Pub-09-578-E. arXiv: 0911.3112. 31. Search for Higgs Bosons Predicted in Two-Higgs-Doublet Models Via Decays to Tau lepton Pairs in 1.96 TeV p anti-p Collisions. A. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 201801 (2009). 32. Measurement of the tt-bar Production Cross Section in 2 fb-1 of p anti-p Collisions at s**(1/2) \ufffd.96 TeV Using Lepton Plus Jets Events with Soft Muon Tagging. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D79, 052007 (2009). arXiv: 0901.4142. 33. First Observation of B-bar0_s --> D+/-_s K-/+ and Measurement of the Ratio of Branching Fractions B(B-bar0_s --> D+/-_s K-/+)/B(B-bar0_s -> D+_s pi+-). T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 191802 (2009) 34. Search for Anomalous Production of Events with Two Photons and Additional Energetic Objects at CDF. T. Aaltonen et al., The CDF Collaboration, Fermilab-Pub-09-535-E. arXiv: 0910.5170. Submitted to Phys. Rev. D October 27, 2009. 35. Measurements of the Top-Quark Mass Using Charged Particle Tracking. T. Aaltonen et al., The CDF Collaboration, submitted to Phys. Rev. D October 7, 2009. Fermilab-Pub-09-464E. arXiv: 0910.0969. 36. A Search for the Higgs Boson Produced in Association with Z --> ell+ ell- Using the Matrix Element Method at CDF II. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 071101 (2009). arXiv: 0908.3534. June 2010 Appendix 3 Page 18 37. Observation of the Omega_b and Measurement of the Properties of the Xi-_b and Omega-_b Baryons. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 072003 (2009). arXiv: 0905.3123. 38. Precision Measurement of the X(3872) Mass in J/psi pi+_ pi+- Decays. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 152001 (2009). 39. First Observation of Vector Boson Pairs in a Hadronic Final State at the Tevatron Collider. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 091803 (2009). arXiv: 0905.4714. 40. Measurement of the Mass of the Top Quark Using the Invariant Mass of Lepton Pairs in Soft Muon b-tagged Events. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 051104 (2009). arXiv: 0906.5371. 41. Search for a Standard Model Higgs Boson in WH --> l nu bb-bar in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. Phys. Rev. Lett. 103, 101802 (2009). arXiv: 0906.5613. 42. Search for Charged Higgs Bosons in Decays of Top Quarks in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 101803 (2009). arXiv: 0907.1269. 43. Search for the Neutral Current Top Quark Decay t --> Zc Using Ratio of Z-Boson + 4 Jets to W-Boson + 4 Jets Production. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 052001 (2009). arXiv: 0905.0277. 44. Search for Anomalous Production of Events with a Photon, Jet, b-quark Jet, and Missing Transverse Energy. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 052003 (2009). arXiv: 0905.0231. 45. Search for Hadronic Decays of W and Z Bosons in Photon Events in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 052011 (2009). arXiv: 0803.4264. 46. Measurement of d sigma/dy of Drell-Yan e+e- Pairs in the Z Mass Region from p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, FermilabPub-09-402-E. arXiv: 0908.3914. Submitted to Phys. Rev. Lett. August 27, 2009. 47. Observation of Electroweak Single Top Quark Production. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 092002 (2009). arXiv: 0903.0885. 48. Search for a Fermiophobic Higgs Boson Decaying into Diphotons in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 061803 (2009). arXiv: 0905.0413. June 2010 Appendix 3 Page 19 49. Search for the Production of Narrow tb-bar Resonances in 1.9 fb-1 of p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 041801 (2009). arXiv: 0902.3276. 50. Production of psi(2S) Mesons in p anti-p Collisions at 1.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 031103 (2009). arXiv: 0905.1982. 51. Search for Hadronic Decays of W and Z in Photon Events in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Eur. Phys. J. C62: 319:326 (2009). arXiv: 0903.2060. 52. Search for a Standard Model Higgs Boson Production in Association with a W Boson using a Neural Network Discriminant at CDF. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D80, 012002 (2009) 53. Search for Long-Lived Massive Charged Particles in 1.96 TeV p anti-p Collisions. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 021802 (2009). arXiv: 0902.1266. 54. Observation of New Charmless Decays of Bottom Hadrons. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 103, 031801 (2009) 55. Precision Measurement of the X(3872) Mass in J/psi pi++ pi+- Decays. T. Aaltonen et al., The CDF Collaboration, Fermilab-Pub-09-330-E. arXiv: 0906.5218. Submitted to Phys. Rev. Lett. June 29, 2009. 56. Evidence for a Narrow Near-Threshold Structure in the J/psi phi Mass Spectrum in B+ --> J/psi phi K+ Decays. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 102, 242002 (2009). arXiv: 0903.2229. 57. Measurement of the Particle Production and Inclusive Differential Cross Sections in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D79, 112005 (2009). 58. Search for WW and WZ Production in Lepton Plus Jets Final States at CDF. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D79, 112011 (2009). arXiv: 0903.0814. 59. A Measurement of the t anti-t Cross Section in p anti-p Collisions at sqrt s \ufffd.96 TeV using Dilepton Events with a Lepton plus Track Selection. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. D79, 112007 (2009). arXiv: 0903.5263. 60. Observation of Exclusive Charmonium Production and gamma gamma -> mu+ mu- in p antip Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 102, 242001 (2009). arXiv: 0902.1271. June 2010 Appendix 3 Page 20 61. Measurement of the k_T Distribution of Particles in Jets Produced in p anti-p Collisions at s**(1/2) \ufffd.96 TeV. T. Aaltonen et al., The CDF Collaboration, Phys. Rev. Lett. 102, 232002 (2009). arXiv: 0811.2820. CDMS Virtual Organization 1. Analysis of the low-energy electron-recoil spectrum of the CDMS experiment. By CDMS Collaboration (Z. Ahmed et al.). FERMILAB-PUB-09-340-E, Jul 2009. (Published Feb 15, 2010). 4pp. Published in Phys.Rev.D81:042002, 2010. e-Print: arXiv:0907.1438 [astro-ph.GA] 2. Search for Axions with the CDMS Experiment. By CDMS Collaboration (Z. Ahmed et al.). FERMILAB-PUB-09-053-E, Feb 2009. (Published Oct 2, 2009). 5pp. Published in Phys.Rev.Lett.103:141802,2009. e-Print: arXiv:0902.4693 [hep-ex] 3. Search for Weakly Interacting Massive Particles with the First Five-Tower Data from the Cryogenic Dark Matter Search at the Soudan Underground Laboratory By CDMS Collaboration (Z. Ahmed et al.). FERMILAB-PUB-08-055-A-E, Feb 2008. (Published Jan 9, 2009). 5pp. Published in Phys.Rev.Lett.102:011301,2009. e-Print: arXiv:0802.3530 [astro-ph] 4. Dark Matter Search Results from the CDMSII Experiment Science The CDMS II Collaboration 327 (5973): 1619 (published March 2010) CIGI Virtual Organization 1. Padmanabhan, A., Ghosh, S., and Wang, S. 2010. “A Self-Organized Grouping (SOG) Method for Efficient Grid Resource Discovery.” Journal of Grid Computing, In press. DOI 10.1007/s10723-009-9145-0. June 2010 Appendix 3 Page 21 CMS Virtual Organization 1. Transverse momentum and pseudorapidity distributions of charged hadrons in pp collisions at = 0.9 and 2.36 TeV Measurements of inclusive charged-hadron transverse-momentum and pseudorapidity distributions are presented for proton-proton collisions at sqrt(s) = 0.9 and 2.36 TeV. The data were collected with the CMS detector during the LHC commissioning in December 2009. [...] arXiv:1002.0621; CMS-QCD-09-010; CERN-PH-EP-2010-003.- Geneva : CERN, 2010 - 33 p. - Published in : J. High Energy Phys. 02 (2010) 041 Preprint ; Supplemental material ; Figure_001a ; Figure_001b ; Figure_002a ; Figure_002b ; Figure_003a ; Figure_003b ; Figure_004a ; Figure_004b ; Figure_005a ; Figure_005b ; Figure_006a ; Figure_006b ; Figure_007a ; Figure_007b ; Springer Open Access article ; 2. Commissioning and Performance of the CMS Pixel Tracker with Cosmic Ray Muons / CMS Collaboration The pixel detector of the Compact Muon Solenoid experiment consists of three barrel layers and two disks for each endcap. The detector was installed in summer 2008, commissioned with charge injections, and operated in the 3.8 T magnetic field during cosmic ray data taking. [...] arXiv:0911.5434; CMS-CFT-09-001.- Geneva : CERN, 2010 - 37 p. - Published in : J. Instrum. 5 (2010) T03007 Preprint ; SISSA/IOP Open Access article 3. Measurement of the Muon Stopping Power in Lead Tungstate / CMS Collaboration A large sample of cosmic ray events collected by the CMS detector is exploited to measure the specific energy loss of muons in the lead tungstate of the electromagnetic calorimeter. The measurement spans a momentum range from 5 GeV/c to 1 TeV/c. [...] arXiv:0911.5397; CMS-CFT-09-005.- 2010 - 31 p. - Published in : J. Instrum. 5 (2010) P03007 Preprint ; SISSA/IOP Open Access article June 2010 Appendix 3 Page 22 4. Performance of the CMS Level-1 Trigger during Commissioning with Cosmic Ray Muons and LHC beams / CMS Collaboration The CMS Level-1 trigger was used to select cosmic ray muons and LHC beam events during data-taking runs in 2008, and to estimate the level of detector noise. This paper describes the trigger components used, the algorithms that were executed, and the trigger synchronisation. [...] arXiv:0911.5422; CMS-CFT-09-013.- 2010 - 49 p. - Published in : J. Instrum. 5 (2010) T03002 Preprint ; SISSA/IOP Open Access article 5. Performance of CMS Muon Reconstruction in Cosmic-Ray Events / CMS Collaboration The performance of muon reconstruction in CMS is evaluated using a large data sample of cosmic-ray muons recorded in 2008. Efficiencies of various high-level trigger, identification, and reconstruction algorithms have been measured for a broad range of muon momenta, and were found to be in good agreement with expectations from Monte Carlo simulation. [...] arXiv:0911.4994; CMS-CFT-09-014.- 2010 - 47 p. - Published in : J. Instrum. 5 (2010) T03022 Preprint ; SISSA/IOP Open Access article 6. Commissioning and Performance of the CMS Silicon Strip Tracker with Cosmic Ray Muons / CMS Collaboration During autumn 2008, the Silicon Strip Tracker was operated with the full CMS experiment in a comprehensive test, in the presence of the 3.8 T magnetic field produced by the CMS superconducting solenoid. Cosmic ray muons were detected in the muon chambers and used to trigger the readout of all CMS sub-detectors. [...] arXiv:0911.4996; CMS-CFT-09-002.- 2010 - 45 p. - Published in : J. Instrum. 5 (2010) T03008 Preprint ; SISSA/IOP Open Access article 7. Performance of the CMS Cathode Strip Chambers with Cosmic Rays / CMS Collaboration The Cathode Strip Chambers (CSCs) constitute the primary muon tracking device in the CMS endcaps. Their performance has been evaluated using data taken during a cosmic ray run in fall 2008. [...] arXiv:0911.4992; CMS-CFT-09-011.- 2010 - 39 p. - Published in : J. Instrum. 5 (2010) June 2010 Appendix 3 Page 23 T03018 Preprint ; SISSA/IOP Open Access article 8. Performance of the CMS Hadron Calorimeter with Cosmic Ray Muons and LHC Beam Data / CMS Collaboration The CMS Hadron Calorimeter in the barrel, endcap and forward regions is fully commissioned. Cosmic ray data were taken with and without magnetic field at the surface hall and after installation in the experimental hall, hundred meters underground. [...] arXiv:0911.4991; CMS-CFT-09-009.- 2010 - 35 p. - Published in : J. Instrum. 5 (2010) T03012 Preprint ; SISSA/IOP Open Access article 9. CMS Data Processing Workflows during an Extended Cosmic Ray Run / CMS Collaboration The CMS Collaboration conducted a month-long data taking exercise, the Cosmic Run At Four Tesla, during October-November 2008, with the goal of commissioning the experiment for extended operation. With all installed detector systems participating, CMS recorded 270 million cosmic ray events with the solenoid at a magnetic field strength of 3.8 T. [...] arXiv:0911.4842; CMS-CFT-09-007.- 2010 - 43 p. - Published in : J. Instrum. 5 (2010) T03006 Preprint ; SISSA/IOP Open Access article 10. Performance of the CMS Drift Tube Chambers with Cosmic Rays / CMS Collaboration Studies of the performance of the CMS drift tube barrel muon system are described, with results based on data collected during the CMS Cosmic Run at Four Tesla. For most of these data, the solenoidal magnet was operated with a central field of 3.8 T. [...] arXiv:0911.4855; CMS-CFT-09-012.- 2010 - 47 p. - Published in : J. Instrum. 5 (2010) T03015 Preprint ; SISSA/IOP Open Access article 11. Calibration of the CMS Drift Tube Chambers and Measurement of the Drift Velocity with Cosmic Rays / CMS Collaboration This paper describes the calibration procedure for the drift tubes of the CMS barrel muon system and reports the main results obtained with data collected during a high statistics cosmic ray data-taking period. The main goal of the calibration is to determine, for each drift cell, the minimum time delay for signals relative to the trigger, accounting for the drift velocity within the cell. [...] June 2010 Appendix 3 Page 24 arXiv:0911.4895; CMS-CFT-09-023.- 2010 - 39 p. - Published in : J. Instrum. 5 (2010) T03016 Preprint ; SISSA/IOP Open Access article 12. Commissioning of the CMS Experiment and the Cosmic Run at Four Tesla / CMS Collaboration The CMS Collaboration conducted a month-long data-taking exercise known as the Cosmic Run At Four Tesla in late 2008 in order to complete the commissioning of the experiment for extended operation. The operational lessons resulting from this exercise were addressed in the subsequent shutdown to better prepare CMS for LHC beams in 2009. [...] arXiv:0911.4845; CMS-CFT-09-008.- 2010 - 37 p. - Published in : J. Instrum. 5 (2010) T03001 Preprint ; SISSA/IOP Open Access article 13. Identification and Filtering of Uncharacteristic Noise in the CMS Hadron Calorimeter / CMS Collaboration Commissioning studies of the CMS hadron calorimeter have identified sporadic uncharacteristic noise and a small number of malfunctioning calorimeter channels. Algorithms have been developed to identify and address these problems in the data. [...] arXiv:0911.4881; CMS-CFT-09-019.- 2010 - 31 p. - Published in : J. Instrum. 5 (2010) T03014 Preprint ; SISSA/IOP Open Access article 14. Commissioning of the CMS High-Level Trigger with Cosmic Rays / CMS Collaboration The CMS High-Level Trigger (HLT) is responsible for ensuring that data samples with potentially interesting events are recorded with high efficiency and good quality. This paper gives an overview of the HLT and focuses on its commissioning using cosmic rays. [...] arXiv:0911.4889; CMS-CFT-09-020.- 2010 - 31 p. - Published in : J. Instrum. 5 (2010) T03005 Preprint ; SISSA/IOP Open Access article 15. Aligning the CMS Muon Chambers with the Muon Alignment System during an Extended Cosmic Ray Run / CMS Collaboration The alignment system for the muon spectrometer of the CMS detector comprises three independent subsystems of optical and analog position sensors. It aligns muon chambers with respect to each other and to the central silicon tracker. [...] June 2010 Appendix 3 Page 25 arXiv:0911.4770; CMS-CFT-09-017.- 2010 - 35 p. - Published in : J. Instrum. 5 (2010) T03019 Preprint ; SISSA/IOP Open Access article 16. Performance of the CMS drift-tube chamber local trigger with cosmic rays / CMS Collaboration The performance of the Local Trigger based on the drift-tube system of the CMS experiment has been studied using muons from cosmic ray events collected during the commissioning of the detector in 2008. The properties of the system are extensively tested and compared with the simulation. [...] arXiv:0911.4893; CMS-CFT-09-022.- 2010 - 33 p. - Published in : J. Instrum. 5 (2010) T03003 Preprint ; SISSA/IOP Open Access article 17. Fine Synchronization of the CMS Muon Drift-Tube Local Trigger using Cosmic Rays / CMS Collaboration The CMS experiment uses self-triggering arrays of drift tubes in the barrel muon trigger to perform the identification of the correct bunch crossing. The identification is unique only if the trigger chain is correctly synchronized. [...] arXiv:0911.4904; CMS-CFT-09-025.- 2010 - 33 p. - Published in : J. Instrum. 5 (2010) T03004 Preprint ; SISSA/IOP Open Access article 18. Performance of CMS hadron calorimeter timing and synchronization using test beam, cosmic ray, and LHC beam data / CMS Collaboration This paper discusses the design and performance of the time measurement technique and of the synchronization systems of the CMS hadron calorimeter. Timing performance results are presented from the Cosmic Run At Four Tesla and LHC beam runs taken in the Autumn of 2008. [...] arXiv:0911.4877; CMS-CFT-09-018.- 2010 - 33 p. - Published in : J. Instrum. 5 (2010) T03013 Preprint ; SISSA/IOP Open Access article 19. Alignment of the CMS Muon System with Cosmic-Ray and Beam-Halo Muons / CMS Collaboration The CMS muon system has been aligned using cosmic-ray muons collected in 2008 and beam-halo muons from the 2008 LHC circulating beam tests. After alignment, the resolution June 2010 Appendix 3 Page 26 of the most sensitive coordinate is 80 microns for the relative positions of superlayers in the same barrel chamber and 270 microns for the relative positions ofendcap chambers in the same ring structure. [...] arXiv:0911.4022; CMS-CFT-09-016.- 2010 - 41 p. - Published in : J. Instrum. 5 (2010) T03020 Preprint ; SISSA/IOP Open Access article 20. Performance Study of the CMS Barrel Resistive Plate Chambers with Cosmic Rays / CMS Collaboration In October and November 2008, the CMS collaboration conducted a programme of cosmic ray data taking, which has recorded about 270 million events. The Resistive Plate Chamber system, which is part of the CMS muon detection system, was successfully operated in the full barrel. [...] arXiv:0911.4045; CMS-CFT-09-010.- 2010 - 33 p. - Published in : J. Instrum. 5 (2010) T03017 Preprint ; SISSA/IOP Open Access article 21. Time Reconstruction and Performance of the CMS Electromagnetic Calorimeter / CMS Collaboration The resolution and the linearity of time measurements made with the CMS electromagnetic calorimeter are studied with samples of data from test beam electrons, cosmic rays, and beam-produced muons. The resulting time resolution measured by lead tungstate crystals is better than 100 ps for energy deposits larger than 10 GeV. [...] arXiv:0911.4044; CMS-CFT-09-006.- 2010 - 27 p. - Published in : J. Instrum. 5 (2010) T03011 Preprint ; SISSA/IOP Open Access article 22. Precise Mapping of the Magnetic Field in the CMS Barrel Yoke using Cosmic Rays / CMS Collaboration Task physics.acc-ph The CMS detector is designed around a large 4 T superconducting solenoid, enclosed in a 12000-tonne steel return yoke. A detailed map of the magnetic field is required for the accurate simulation and reconstruction of physics events in the CMS detector, not only in the inner tracking region inside the solenoid but also in the large and complex structure of the steel yoke, which is instrumented with muon chambers. [...] arXiv:0910.5530; CMS-CFT-09-015.- 2010 - 37 p. - Published in : J. Instrum. 5 (2010) June 2010 Appendix 3 Page 27 T03021 Preprint ; SISSA/IOP Open Access article 23. Performance and Operation of the CMS Electromagnetic Calorimeter / CMS Collaboration Task physics.acc-ph The operation and general performance of the CMS electromagnetic calorimeter using cosmic-ray muons are described. These muons were recorded after the closure of the CMS detector in late 2008. [...] arXiv:0910.3423; CMS-CFT-09-004.- 2010 - 39 p. - Published in : J. Instrum. 5 (2010) T03010 Preprint ; SISSA/IOP Open Access article 24. Alignment of the CMS Silicon Tracker during Commissioning with Cosmic Rays / CMS Collaboration Task physics.acc-ph The CMS silicon tracker, consisting of 1440 silicon pixel and 15148 silicon strip detector modules, has been aligned using more than three million cosmic ray charged particles, with additional information from optical surveys. The positions of the modules were determined with respect to cosmic ray trajectories to a precision of 3-4 microns RMS in the barrel and 314 microns RMS in the endcap in the most sensitive coordinate. [...] arXiv:0910.2505; CMS-CFT-09-003.- 2010 - 41 p. - Published in : J. Instrum. 5 (2010) T03009 Preprint ; SISSA/IOP Open Access article 25. The CMS experiment at the CERN LHC / CMS Collaboration 2008 - Published in : J. Instrum. 3 (2008) S08004 SISSA/IOP Open Access article Presented at : The CERN Large Hadron Collider 26. CMS technical design report, volume II: Physics performance 2007 - Published in : J. Phys. G 34 (2007) 995-1579 27. CMS Physics : Technical Design Report v.2: Addendum on High Density QCD with Heavy Ions / d'Enterria, D (ed.) (CERN) ; Ballintijn, M (ed.) (MIT) ; Bedjidian, M (ed.) (Lyon, IPN) ; Hoffman, D (ed.) (Illinois U., Chicago) ; Kodolova, Olga (ed.) (Moscow State U.) ; Loizides, C (ed.) (MIT) ; Lokhtin, I P (ed.) (Moscow State U.) ; Lourenco, C (ed.) (CERN) ; Mironov, C (ed.) (Illinois U., Chicago) ; Petrushanko, S V (ed.) (Moscow State U.) et al. CMS-TDR-008.2-add-1; CERN-LHCC-2007-009.- Geneva : CERN, 2007 - 172 p. Technical Design Report CMS, 8.2-add.1 - Published in : J. Phys. G 34 (2007) 2307-2455 June 2010 Appendix 3 Page 28 DZero Virtual Organization Submitted: 1. Search for CP Violation in Semileptonic Bs0 Decays, Submitted 4/29/09: Phys. Rev. Lett., arXiv.org:0904.3907 2. Measurement of the tt Cross Section using High-Multiplicity Jet Events, Submitted 11/23/09: Phys. Rev. D, arXiv.org:0911.4286 3. Dependence of the tt Production Cross Section on the Transverse Momentum of the Top Quark, Submitted 1/12/10: Phys. Lett. B, arXiv.org:1001.1900 4. Measurement of the Dijet Invariant Mass Cross Section in pbarp Collisions at √s = 1.96 TeV, Submitted 2/25/10: Phys. Lett. B, arXiv.org:1002.4594 5. Search for Randall-Sundrum Gravitons in the Dielectron and Diphoton Final States with 5.4 fb-1 of Data from pp Collisions at √s = 1.96 TeV, Submitted 4/12/10: Phys. Rev. Lett., arXiv.org:1004.1826 6. Search for Scalar Bottom Quarks and Third-Generation Leptoquarks in pbarp Collisions at √s = 1.96 TeV, Submitted 5/13/10: Phys. Lett. B, arXiv.org:1005.2222 7. Evidence for an Anomalous Like-Sign Dimuon Charge Asymmetry, Submitted 5/16/10: Phys. Rev. D, arXiv.org:1005.2757 8. Combined Tevatron Upper Limit on gg→H→WW and Constraints on the Higgs Boson Mass in Fourth-Generation Fermion Models, Co-authors: DØ and CDF collaborations. Submitted 5/18/10: Phys. Rev. D, arXiv.org:1005.xxxx Accepted: 1. b-Jet Identification in the DØ Experiment, Accepted 3/14/10: Nucl. Instrum. Methods A, arXiv.org:1002.4224 2. Search for Single Top Quarks in the Tau+Jets Channel using 4.8 fb-1 of pbarp Collision Data, Accepted 5/3/10: Phys. Lett. B, arXiv.org:0912.1066 3. Measurement of Direct Photon Pair Production Cross Sections in pp Collisions at √s = 1.96 TeV, Accepted 5/10/10: Phys. Lett. B, arXiv.org:1002.4917 June 2010 Appendix 3 Page 29 Published: 1. Search for the Associated Production of a b Quark and a Neutral Supersymmetric Higgs Boson that Decays into τ Pairs, Phys. Rev. Lett. 104, 151801 (2010) 2. Double Parton Interactions in γ+3 Jet Events in pbarp Collisions at √s = 1.96 TeV Phys. Rev. D 81, 052012 (2010) 3. Search for the Standard Model Higgs Boson in the ZH→ννbb Channel in 5.2 fb-1 of pbarp Collisions at √s = 1.96 TeV, Phys. Rev. Lett. 104, 071801 (2010) 4. Search for Higgs Boson Production in Dilepton and Missing Energy Final States with 5.4 fb-1 of pbarp Collisions at √s = 1.96 TeV, Phys. Rev. Lett. 104, 061804 (2010) 5. Combination of Tevatron Searches for the Standard Model Higgs Boson in the W+W- Decay Mode, Phys. Rev. Lett. 104, 061802 (2010) 6. Search for a Resonance Decaying into WZ Boson Pairs in pp Collisions Phys. Rev. Lett. 104, 061801 (2010) 7. Determination of the Strong Coupling Constant from the Inclusive Jet Cross Section in pbarp Collisions at √s = 1.96 TeV, Phys. Rev. D 80, 111107 (2009) 8. Direct Measurement of the W Boson Width, Phys. Rev. Lett. 103, 231802 (2009) 9. Measurement of the Top Quark Mass in Final States with Two Leptons, Phys. Rev. D 80, 092006 (2009) 10. Measurement of the t-Channel Single Top Quark Production Cross Section Phys. Lett. B 682, 363 (2010) 11. Measurement of Z/γ*+jet+X Angular Distributions in pbarp Collisions at √s = 1.96 TeV Phys. Lett. B 682, 370 (2010) 12. Search for Charged Higgs Bosons in Top Quark Decays, Phys. Lett. B 682, 278 (2009) June 2010 Appendix 3 Page 30 13. Measurement of Dijet Angular Distributions at √s = 1.96 TeV and Searches for Quark Compositeness and Extra Spatial Dimensions, Phys. Rev. Lett. 103, 191803 (2009) 14. Measurement of the WW Production Cross Section with Dilepton Final States in pbarp Collisions at √s = 1.96 TeV and Limits on Anomalous Trilinear Gauge Couplings Phys. Rev. Lett. 103, 191801 (2009) 15. Combination of tt Cross Section Measurements and Constraints on the Mass of the Top Quark and its Decay into Charged Higgs Bosons, Phys. Rev. D 80, 071102 (2009) 16. Search for Pair Production of First-Generation Leptoquarks in pbarp Collisions at √s = 1.96 TeV, Phys. Lett. B 681, 224 (2009) 17. Measurement of the W Boson Mass, Phys. Rev. Lett. 103, 141801 (2009) 18. Search for Charged Higgs Bosons in Decays of Top Quarks, Phys. Rev. D 80, 051107 (2009) 19. Measurement of Trilinear Gauge Boson Couplings from WW + WZ → lνjj Events in pbarp Collisions at √s = 1.96 TeV, Phys. Rev. D 80, 053012 (2009) 20. Direct Measurement of the Mass Difference Between Top and Antitop Quarks Phys. Rev. Lett. 103, 132001 (2009) 21. A Novel Method for Modeling the Recoil in W Boson Events at Hadron Colliders Nucl. Instrum. Methods in Phys. Res. A 609, 250 (2009) 22. Observation of Single Top-Quark Production, Phys. Rev. Lett. 103, 092001 (2009) 23. Search for Dark Photons from Supersymmetric Hidden Valleys Phys. Rev. Lett. 103, 081802 (2009) June 2010 Appendix 3 Page 31 24. Search for Associated Production of Charginos and Neutralinos in the Trilepton Final State using 2.3 fb-1 of Data Phys. Lett. B 680, 34 (2009) 25. Search for Resonant Pair Production of Neutral Long-Lived Particles Decaying to bbarb in pbarp Collisions at √s = 1.96 TeV, Phys. Rev. Lett. 103, 071801 (2009) 26. Search for Squark Production in Events with Jets, Hadronically Decaying Tau Leptons and Missing Transverse Energy at √s = 1.96 TeV, Phys. Lett. B 680, 24 (2009) 27. Search for Next-to-Minimal Supersymmetric Higgs Bosons in the h → aa → μμ μμ, μμ ττ Channels using pp Collisions at √s = 1.96 TeV, Phys. Rev. Lett. 103, 061801 (2009) 28. Measurement of the tt Production Cross Section and Top Quark Mass Extraction Using Dilepton Events in pp Collisions, Phys. Lett. B 679, 177 (2009) ENGAGE Virtual Organization 1. Feng Zhao, ShuaiCheng Li, Beckett W. Sterner and Jinbo Xu. Discriminative learning for protein conformation sampling. PROTEINS: Structure, Function and Bioinformatics, 2008 Oct; 73(1):228-40. 2. A. D. Rosato, V. Ratnaswamy, D. J. Horntrop, L. Kondic, “Discrete element modeling of tapped density relaxation”, IUTAM-ISIMM Symposium on Mathematical Modeling and Physical Instances of Granular Flows, Sept. 14-18, 2009, Reggio-Calabria, Italy. (Presentations/Posters) 3. M. A. Murphy and S. Goasguen “Virtual Organization Clusters: Self-Provisioned Clouds on the Grid” submitted to Elsevier Journal of Future Generation Computer Systems special issue on Cloud Computing, (Accepted Oct 2009 with revisions) June 2010 Appendix 3 Page 32 4. L. Stout, M. Murphy and S. Goasguen. “Kestrel: An XMPP based Framework for Many-Task Computing Applications” 2nd Workshop on Many-Task Computing on Grids and Supercomputers, Portland, OR, November 16th 2009 (MTAGS'09) 5. Rosato, A.D., Ratnaswamy, V., Horntrop, D.J., Dybenko, O., Kondic, L., "A Concise Review of Tapped Density Relaxation and Recent Discrete Element Results", Proceedings of the IUTAM Symposium \Mathematical Modeling and Physical Instances of Granular Flows, ed. J. Goddard, Calabria, Italy (2009). 6. M. Fenn, J. Lauret and S. Goasguen “Contextualization in Practice: The Clemson Experience” ACAT , Jaipur, India February 2010. 7. M. A. Murphy, L. Abraham, M. Fenn and S. Goasguen “Autonomic Clouds on the Grid” Journal of Grid Computing Volume 8, Number 1 (March 2010), pages 1-18. 8. V. Patel, J. McGregor and S. Goasguen “SysFlow: A Workflow Engine for Service Based Infrastructures” IEEE Sysconf 2010, May 2010, CA 9. A. D. Rosato, O. Dybenko, V. Ratnaswamy, D. Horntrop, Nathan Andrysco, Xavier Tricoche, Lou Kondic, "Microstructure Evolution in Density Relaxation by Tapping", Frontiers in Applied and Computational Mathematics, New Jersey Institute of Technology, Newark, NJ, USA, May 2010. 10. L. Stout, M. Fenn, M. Murphy and S. Goasguen "Scaling Virtual Organization Clusters over a Wide Area Network using the Kestrel Workload Management System" VTDC, June 2010, Chicago 11. L. Abraham, M. Fenn, M. Murphy and S. Goasguen “Self-Provisioned Hybrid Clouds” 7th IEEE International Conference on Autonomic Computing, June 7-11, 2010, D.C, USA June 2010 Appendix 3 Page 33 12. A. D. Rosato, O. Dybenko, V. Ratnaswamy, D. Horntrop, Nathan Andrysco, Xavier Tricoche, Lou Kondic, "Microstructure Evolution in Density Relaxation by Tapping", Gordon Research Conference: Granular & Granular Fluid Flow, Colby College, Waterville, Maine, USA, June 2010 13. A. D. Rosato, O. Dybenko, D. J. Horntrop, V. Ratnaswamy, L. Kondic, “Microstructure Evolution in Density Relaxation by Tapping”, to appear in Phys. Rev. E 14. J.McGee, M.Rynge, J.Reilly. Building Solutions for Researchers with a Science Gateway. TeraGrid 09 conference. http://archive.teragrid.org/tg09/files/tg09_submission_75.pdf 15. A. Prlic UCSD, C. Bizon RENCI, Calculating all Pairwise Similarities from the RCSB Protein Data Bank: Client/Server Work Distribution on the Open Science Grid. http://www.renci.org/publications/techreports/TR-09-03.pdf 16. Tao Wu, X. Sheldon Wang, Barry Cohen and Hongya Ge. Molecular Modeling of Normal and Sickle Hemoglobins, IJMCE. Accepted. 17. Feng Zhao, Jian Peng and Jinbo Xu. Fragment-free Approach to Protein Folding Using Conditional Neural Fields. Bioinformatics (Proceedings of ISMB 2010), 2010. 18. Feng Zhao, Jian Peng, Joe DeBartolo, Karl F. Freed, Tobin R. Sosnick and Jinbo Xu. A probabilistic and continuous model of protein conformational space for templatefree modeling. Journal of Computational Biology, 2010. In Press. GLOW Virtual Organization 1. Methods for point-source analysis with temporal structure in high-energy neutrino telescopes, J. Braun, et al., Astropart.Phys.33:175-181,2010. e-Print: arXiv:0912.1572 June 2010 Appendix 3 Page 34 2. Limits on a muon flux from neutralino annihilations in the Sun with the IceCube 22-string detector, R. Abbasi, et al. (IceCube collaboration), Physical Review Letters 102 (2009) 201302, 3. Determination of the Atmospheric Neutrino Flux and Searches for New Physics with AMANDA-II, A. Achterberg et al. (IceCube collaboration), Phys.Rev.D79:102005,2009 4. Search for point sources of high-energy neutrinos with final data from AMANDA-II, IceCube collaboration, Physical Review D79 (2009) 062001; astro-ph/08091646. 5. Teague, B., Waterman, M.S., Goldstein, S., Potamousis, K., Zhou, S., Reslewic, S., Sarkar, D., Valouev, A., Churas, C., Kidd, J., Kohn, S., Runnhein, R., Lamers, C., Forrest, D., Newton, M.A., Eichler, E.E., Kent-First, M., Surti, U., Livny, M., and Schwartz, D.C. Highresolution human genome structure by single molecule analysis. Proc. Natl. Acad. Sci. USA, epub May 31, 2010 doi:10.1073/pnas.0914638107. 6. Ma, L., van der Doe, H. C., Borkovich, K.A., Coleman, J.C., Daboussi, M.-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., Houterman, P.M., Kang, S., Shim, W.-B., Woloshuk, C., Xie, X., Xu, J.-R., Antoniw, J., Baker, S.E., Bluhm, B.H., Breakspear, A., Brown, D.W., Butchko, R.A.E., Chapman, S., Coulson, R., Coutinho, P.M., Danchin, E.G.J., Diener, A., Gale, L.R., Gardiner, D.M., Goff, S., Hammond-Kosack, K.E., Hilburn, K., Hua-Van, A., Jonkers, W., Kazan, K., Kodira, C.D., Michael Koehrsen, M., Kumar, L., Lee, Y.-H., Li , L. Manners, J.M., Miranda-Saavedra, D, Mukherjee, M., Park, G., Park, J., Park, S.-Y., Robert H. Proctor , Regev, A., Ruiz-Roldan, M.C., Sain, D., Sakthikumar, S., Sykes, S., Schwartz, D.C., Turgeon, B.G., Wapinski, I., Yoder, O., Young, S., Zeng, Q., Zhou, S., Galagan, J., Cuomo, C.A., Kistler, H.C and Rep, M.. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature, epubl March 18, 2010. 7. Schnable, P.S. et al. (~100 authors). The B73 maize genome: complexity, diversity and dynamics. Science 326: 1112-1115, 2009. June 2010 Appendix 3 Page 35 8. Zhou, S., Wei, F., Nguyen, J., Bechner, M., Potamousis, K., Goldstein, S., Pape, L., Mehan, M., Churas, C., Pasternak, S., Forrest, D.K., Wise, R., Ware, D., Wing, R., Waterman, M.S., Livny, M., and Schwartz, D.C. A single molecule scaffold for the maize genome. PLoS Genetics 5: e1000711, 2009. 9. Wei, F., Zhang, J., Zhou, S., He, R., Schaeffer, M., Collura, K., Kudrna, D., Faga, B.P., Wissotski, M., Golser, W., Rock, S.M., Graves, T.A., Fulton, R.S., Coe, E., Schnable, P.S., Schwartz, D.C., Ware, D. Clifton, S.W., Wilson, R.K., and Wing, R.W. The physical and genetics framework of the Maize B73 genome. PLoS Genetics 5: e1000715, 2009. 10. Wei, F., Stein, J.C., 2, Liang, C., Zhang, J., Fulton, R.S., Baucom, R.S., De Paoli, E., Zhou, S., 6, Yang, L., Han, Y., Pasternak, S., Narechania, A., Zhang, L., Yeh, C.-T., Ying, K., Nagel, D.H., Collura, K., Kudrna, D., Currie, J., Lin, J., Kim, H.R., Angelove, A., Scara, G., Wissotski, M., Golser, W., Courtney, L., Kruchowski, S., Graves, T., Rock, S., Adams, S., Fulton, L., Fronick, C., Courtney, W., Kramer, M., Spiegel, L., Nascimento, L., Kalyanaraman, A., Chaparro, C., Deragon, J.-M., SanMiguel, P., 11, Ning Jiang, N., Wessler, S.R., Green, P.J., Yeisoo Yu, Y., Schwartz, D.C., Meyers, B.C., Bennetzen, J., Martienssen, R., McCombie, W.R., Srinivas Aluru, S., Clifton, S.W., Schnable, P.S., Ware, D., Wilson, R.K., Wing, R.A., Detailed analysis of a contiguous 22-Mb region of the maize genome, PLoS Genetics 5: e1000728, 2009. 11. Sambriski, E.J., Schwartz, D.C., and de Pablo, J.J. Uncovering pathways in DNA oligonucleotide hybridization via transition state analysis. Proc Natl Acad Sci U S A 106(43):18125-30. Epub Oct 8, 2009. 12. Coleman, J.J., Rounsley, S.D., Rodriguez-Carres, M., Kuo, A., Wasmann, C.C., Grimwood, J., Schmutz, J. , Taga, M., White, G.J., Zhou, S., Schwartz, D.C., Freitag, M., Ma, L., Danchin, E.G.J., Henrissat, B., Coutinho, P.M., Nelson, D.R., Straney, D., Napoli, C.A., Gribskov, M., Rep, M., Kroken, S., Molnár, I., Rensing, C., Kennell, J.C., Zamora, J., Farman, M.L., Selker, E.U., Salamov, A., Shapiro, H., Pangilinan, J., Lindquist, E., Lamers, C., Grigoriev, I., Geiser, D.M., Covert, S.F., Temporini, E., and VanEtten, H.D. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. PLoS Genetics 5(8): e1000618, 2009; Epub Aug 28, 2009. June 2010 Appendix 3 Page 36 13. Haas, B., Kamoun, S., Zody, M.C., Jiang R.H.Y., Handsaker, R.E., Cano, L.M., Grabherr, M., Kodira, C.D., Raffaele, S., Torto-Alalibo, T., Bozkurt, T.O., O'Neill, K., Ah-Fong, A.M.V., Alvarado, L., Anderson, V.L., Armstrong, M.R., Avrova, A., Baxter, L., Beynon, J., Boevink, P.C., Bos, J.I.B., Broad Institute Genome Sequencing Platform, Bulone, V., Cai, G., Cakir. C., Carrington, J.C., Chawner, M., Costanzo, S., Fahlgren, N., Fugelstad, J., Gilroy, E.M., Gnerre. S., Green, P.J., Grenville-Briggs, L.J., Griffith, J., Gupta, S., Horn, K., Horner, N.R., Hu, C.H., Huitema, E., Jeong, D.H., Jones, A., Jones, J.D.G., Jones, R., Karlsson, E., Lamour, K., Liu, Z., Ma, L., MacLean, D., Marcus, C., McDonald, H., McWalters, J., Meijer, H.J.G., Morgan, W., Morris, P.F., Munro, C.A., Ospina-Giraldo, M., Pinzón, A., Pritchard, L., Ramsahoye, B., Ren, Q., Restrepo, S., Roy. S., Sadanandom, A., Savidor, A., Schornack, S., Schwartz, D.C., Schumann, U.D., Schwessinger, B., Seyer, L., Sharpe, T., Silvar, C., Song, J., Studholme, D.J., Sykes, S., van de Vondervoort, P.J.I., Vipaporn, P., Wawra, S., Weide, R., Win, J., Young, C., Zhou, S., Fry, W., Meyers, B.C., van West, P., Ristaino, J., Govers, F., Birch, P.R.J., Whisson, S., Judelson, H.S., and Nusbaum, C. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 461 (7262):393-8, 2009. Epub Sep 9, 2009. (Featured in Nature’s Editor’s Summary and cover). 14. Interpolation in the Directed Assembly of Block Copolymers on Nanopatterned Substrates: Simulation and Experiments. Franois A. Detcheverry, Guoliang Liu, Paul F. Nealey, Juan J. de Pablo. Macromolecules 2010 43 (7), 3446-3454 15. Remediation of Line Edge Roughness in Chemical Nanopatterns by the Directed Assembly of Overlying Block Copolymer Films. Mark P. Stoykovich, Kostas Ch. Daoulas, Marcus Mller, Huiman Kang, Juan J. de Pablo, Paul F. Nealey. Macromolecules 2010 43 (5), 23342342 16. 2D IR Line Shapes Probe Ovispirin Peptide Conformation and Depth in Lipid Bilayers. Ann Marie Woys, Yu-Shan Lin, Allam S. Reddy, Wei Xiong, Juan J. de Pablo, James L. Skinner, Martin T. Zanni. Journal of the American Chemical Society 2010 132 (8), 2832-2838 17. Characterization of the Reversible Interaction of Pairs of Nanoparticles Dispersed in Nematic Liquid Crystals. Gary M. Koenig Jr., Juan J. de Pablo, Nicholas L. Abbott, Langmuir 2009 25 (23), 13318-13321 June 2010 Appendix 3 Page 37 18. Nonlinear Effects in the Nanophase Segregation of Polyelectrolyte Gels. Prateek K. Jha, Francisco J. Solis, Juan J. de Pablo, Monica Olvera de la Cruz. Macromolecules 2009 42 (16), 6284-6289 19. Characterization of Adsorbate-Induced Ordering Transitions of Liquid Crystals within Monodisperse Droplets. Jugal K. Gupta, Jacob S. Zimmerman, Juan J. de Pablo, Frank Caruso, Nicholas L. Abbott, Langmuir. Macromolecules 2009 25 (16), 9016-9024 20. Fluorinated Quaternary Ammonium Salts as Dissolution Aids for Polar Polymers in Environmentally Benign Supercritical Carbon Dioxide. Manabu Tanaka, Abhinav Rastogi, Gregory N. Toepperwein, Robert A. Riggleman, Nelson M. Felix, Juan J. de Pablo, Christopher K. Ober. Chemistry of Materials 2009 21 (14), 3125-3135 21. Single Nanoparticle Tracking Reveals Influence of Chemical Functionality of Nanoparticles on Local Ordering of Liquid Crystals and Nanoparticle Diffusion Coefficients. Gary M. Koenig Jr., Rizal Ong, Angel D. Cortes, J. Antonio Moreno-Razo, Juan J. de Pablo, Nicholas L. Abbott. Nano Letters 2009 9 (7), 2794-2801 22. "Heterogeneous dynamics during deformation of a polymer glass". Robert A. Riggleman, Hau-Nan Lee, Mark D. Ediger, and Juan J. de Pablo. Soft Matter 6(2):287-291, January 2010. [doi:10.1039/b912288e ] 23. "Antiplastization and the elastic properties of glass-forming polymer liquids". Robert A. Riggleman, Jack F. Douglas, and Juan J. de Pablo. Soft Matter 6(2):292-304, January 2010. [doi:10.1039/b915592a ] 24. "Human embryonic stem cell-derived keratinocytes exhibit an epidermal transcription program and undergo epithelial morphogenesis in engineered tissue contacts". Christian M. Metallo, Samira M. Azarin, Laurel E. Moses, Lin Ji, Juan J. de Pablo, and Sean P. Palecek. Tissue Engineering Part A 16(1):213-223, January 2010. [doi:10.1089/ten.tea.2009.0325 ] June 2010 Appendix 3 Page 38 25. "Simulations of theoretically informed coarse grain models polymeric systems". Francois A. Detcheverry, Darin Q. Pike, Paul F. Nealey, Marcus Meuller, and Juan J. de Pablo. Faraday Discussions 144():111-125, January 2010. [doi:10.1039/b902283j ] 26. GNNQQNY - Investigation of Early Steps during Amyloid Formation. Allam S. Reddy, Manan Chopra, Juan J. de Pablo. Biophysical Journal - 17 March 2010 (Vol. 98, Issue 6, pp. 1038-1045) [doi:10.1016/j.bpj.2009.10.057] 27. Solution Structures of Rat Amylin Peptide: Simulation, Theory, and Experiment. Allam S. Reddy, Lu Wang, Yu-Shan Lin, Yun Ling, Manan Chopra, Martin T. Zanni, James L. Skinner, Juan J. De Pablo. Biophysical Journal - 3 February 2010 (Vol. 98, Issue 3, pp. 443451) [doi:10.1016/j.bpj.2009.10.029] 28. Disruption and formation of surface salt bridges are coupled to DNA binding in integration host factor (IHF): acomputational analysis, L. Ma, M. T. Record, Jr., N. Sundlass, R. T. Raines and Q. Cui, {\it J. Mol. Biol.}, Submitted 29. An implicit solvent model for SCC-DFTB with Charge-Dependent Radii, G. Hou, X. Zhu and Q. Cui, {\it J. Chem. Theo. Comp.}, Submitted 30. Sequence-dependent interaction of $\beta$-peptides with membranes, J. Mondal, X. Zhu, Q. Cui and A. Yethiraj, {\it J. Am. Chem. Soc.}, Submitted 31. A new coarse-grained model for water: The importance of electrostatic interactions, Z. Wu, Q. Cui and A. Yethiraj, {\it J. Phys. Chem. B} Submitted 32. How does bone sialoprotein promote the nucleation of hydroxyapatite? A molecular dynamics study using model peptides of different conformations, Y. Yang, Q. Cui, and N. Sahai, {\it Langmuir}, Submitted June 2010 Appendix 3 Page 39 33. Preferential interactions between small solutes and the protein backbone: A computational analysis, L. Ma, L. Pegram, M. T. Record, Jr., Q. Cui, {\it Biochem.}, 49, 1954-1962 (2010) 34. Establishing effective simulation protocols for $\beta$- and$\alpha/\beta$-peptides. III. Molecular Mechanical (MM) model for a non-cyclic $\beta$-residue, X. Zhu, P. K\"onig, M. Hoffman, A. Yethiraj and Q. Cui, {\it J. Comp. Chem.}, In press (DOI: 10.1002/jcc.21493) 35. Curvature Generation and Pressure Profile in Membrane with lysolipids: Insights from coarse-grained simulations, J. Yoo and Q. Cui, {\it Biophys. J.} 97, 2267-2276 (2009) HCC Virtual Organization 1. "PROFESS: A PROtein Function, Evolution, Structure and Sequence database"Thomas Triplet, Matthew D. Shortridge, Mark A. Griep, Jaime L. Stark, Robert Powers and Peter Revesz. It has been accepted with revisions to the journal Database. LIGO Collaboration 17 S3 Bursts LSC, AURIGA Class. Quantum Grav. 25 (2008) 095004 arXiv:0710.0497 200710 A Joint Search for Gravitational Wave Bursts with AURIGA and LIGO. 18 S3 Inspiral LSC Phys. Rev. D 78 (2008) 042002 200712 Search of S3 LIGO data for gravitational wave signals from spinning black hole and neutron star binary inspirals. arXiv:0712.2050 20 S4 Bursts LSC Phys. Rev. D 76 (2007) 062003 astro-ph/0703419 Search for gravitational wave radiation associated with the pulsating tail of the SGR 1806-20 hyperflare of December 27, 2004 using LIGO. 200703 21 S4 Bursts LSC Class. Quantum Grav. 24 (2007) 5343-5369 arXiv:0704.0943 200704 Search for gravitational-wave bursts in LIGO data from the fourth science run. 22 S4/S3/S2 Bursts LSC Phys. Rev. D 77 (2008) 062004 arXiv:0709.0766 200709 Search for Gravitational Waves Associated with 39 Gamma-Ray Bursts Using data from the Second, Third, and Fourth LIGO Runs. June 2010 Appendix 3 Page 40 23 S4 Bursts LSC Class. Quantum Grav. 25 (2008) 245008 arXiv:0807.2834 200807 First joint search for gravitational-wave bursts in LIGO and GEO600 data. 24 S4/S3 Inspiral LSC Phys. Rev. D 77 (2008) 062002 arXiv:0704.3368 200704 Search for gravitational waves from binary inspirals in S3 and S4 LIGO data. 25 S4/S3 CW LSC, Kramer, Lyne Phys. Rev. D 76 (2007) 042001 gr-qc/0702039 200702 Upper Limits on Gravitational Wave Emission from 78 Radio Pulsars. 26 S4 CW LSC Phys. Rev. D 77 (2008) 022001 All-sky search for periodic gravitational waves in LIGO S4 data. arXiv:0708.3818 200708 S4 CW LSC Phys. Rev. D 79 (2009) 022001 arXiv:0804.1747 The Einstein@Home search for periodic gravitational waves in LIGO S4 data. 200804 27 28 S4 200608 Stochastic LSC Astrophys. J. 659 (2007) 918 astro-ph/0608606 Searching for Stochastic Background of Gravitational Waves with LIGO. 29 S4 200703 Stochastic LSC Phys. Rev. D 76 (2007) 082003 Upper limit map of a background of gravitational waves. astro-ph/0703234 30 S4 Stochastic LSC, ALLEGRO Phys. Rev. D 76 (2007) 022001 gr-qc/0703068 200703 First Cross-Correlation Analysis of Interferometric and Resonant-Bar Gravitational-Wave Data for Stochastic Backgrounds. 31 S5 Bursts/Inspiral LSC, Hurley Astrophys. J. 681 (2008) 1419 arXiv:0711.1163 200711 Implications for the Origin of GRB 070201 from LIGO Observations. 32 S5 CW LSC Astrophys. J. Lett. 683 (2008) 45 arXiv:0805.4758 Beating the spin-down limit on gravitational wave emission from the Crab pulsar. 200805 33 S5 Bursts LSC, Barthelmy, Gehrels, Hurley, Palmer Phys. Rev. Lett. 101 (2008) 211102 arXiv:0808.2050 200808 Search for Gravitational Wave Bursts from Soft Gamma Repeaters. 35 S5 CW LSC Phys. Rev. Lett.102 (2009) 111102 arXiv:0810.0283 All-sky LIGO Search for Periodic Gravitational Waves in the Early S5 Data. 200810 36 200901 S5 June 2010 CBC LSC Phys. Rev. D 79 (2009) 122001 Appendix 3 arXiv:0901.0302 Page 41 Search for Gravitational Waves from Low Mass Binary Coalescences in the First Year of LIGO's S5 Data. 37 S4 Bursts LSC Phys Rev D 80 (2009) 062002 arXiv:0904.4718 First LIGO search for gravitational wave bursts from cosmic (super)strings. 200904 38 S5 Bursts LSC Phys Rev D 80 (2009) 102002 arXiv:0904.4910 Search for High Frequency Gravitational Wave Bursts in the First Calendar Year of LIGO's Fifth Science Run. 200905 39 S5 200905 Storm. Bursts LSC Astrophys. J. 701 (2009) L68-L74 arXiv:0905.0005 Stacked Search for Gravitational Waves from the 2006 SGR 1900+14 40 S5 Bursts LSC Phys Rev D 80 (2009) 102001 arXiv:0905.0020 Search for gravitational-wave bursts in the first year of the fifth LIGO science run. 200905 41 S4 CBC LSC Phys. Rev. D 80 (2009) 062001 arXiv:0905.1654 Search for gravitational wave ringdowns from perturbed black holes in LIGO S4 data. 200905 42 S5 CW LSC, Anderson Phys. Rev. D 80 (2009) 042003 arXiv:0905.1705 200905 Einstein@Home search for periodic gravitational waves in early S5 LIGO data. 43 S5 CBC LSC Phys. Rev. D 80 (2009) 047101 arXiv:0905.3710 Search for Gravitational Waves from Low Mass Compact Binary Coalescence in 186 Days of LIGO's fifth Science Run 200905 45 S5/VSR1 Stochastic LSC, Virgo Nature 460 (2009) 990 arXiv:0910:5772 200908 An upper limit on the stochastic gravitational-wave background of cosmological origin. 46 S5/VSR1 Bursts LSC, Virgo Astrophys. J. 715 (2010) 1438 arXiv:0908.3824 200908 Search for gravitational-wave bursts associated with gamma-ray bursts using data from LIGO Science Run 5 and Virgo Science Run 1. 47 S5/VSR1 CW LSC, Virgo Astrophys. J. 713 (2010) 671 arXiv:0909.3583 200909 Searches for gravitational waves from known pulsars with S5 LIGO data. 48 S5/VSR1 CBC LSC, Virgo Astrophys. J. 715 (2010) 1453 arXiv:1001.0165 201001 Search for gravitational-wave inspiral signals associated with short Gamma-Ray Bursts during LIGO's fifth and Virgo's June 2010 Appendix 3 Page 42 first science run. 49 S5/VSR1 Bursts LSC, Virgo Phys. Rev. D 81 (2010) 102001 arXiv:1002.1036 201001 All-sky search for gravitational-wave bursts in the first joint LIGO-GEO-Virgo run. MiniBooNE Virtual Organization 1. A.A. Aguilar-Arevalo et al., First Measurement of the Muon Neutrino Charged Current Quasielastic Double Differential Cross Section, arXiv:1002:2680 [hep-ex], Phys. Rev. D81, 092005 (2010), Data release. 2. A.A. Aguilar-Arevalo et al., "Measurement of νμ and ν̅μ induced neutral current single π0 production cross sections on mineral oil at Eν~O(1 GeV)", arXiv:0911.2063 [hep-ex], Phys. Rev. D81, 013005 (2010) Data release. 3. A.A. Aguilar-Arevalo et al., "A Search for Core-Collapse Supernovae using the MiniBooNE Neutrino Detector", arXiv:0910.3182 [hep-ex], Phys. Rev. D81, 032001 (2010) 4. A.A. Aguilar-Arevalo et al., "Measurement of the νμ CC pi+/QE Cross Section Ratio on Mineral Oil in a 0.8 GeV Neutrino Beam", arXiv:0904.3159 [hep-ex], Phys. Rev. Lett. 103, 081801 (2009) 5. A.A. Aguilar-Arevalo et al., "A Search for Electron Anti-Neutrino Appearance at the Δm2 ~1 eV2 Scale", arXiv:0904.1958 [hep-ex], Phys. Rev. Lett. 103, 111801 (2009) Data release. 6. A.A. Aguilar-Arevalo et al., "A Search for Muon Neutrino and Anti-Neutrino Disappearance in MiniBooNE", arXiv:0903.2465 [hep-ex], Phys. Rev. Lett. 103, 061802 (2009) Data release. June 2010 Appendix 3 Page 43 MINOS Virtual Organization 1. P. Adamson et al.(152 authors), "Neutrino and antineutrino inclusive charged-current cross section measurements with the MINOS near detector, "Fermilab-Pub-09-468-E, Phy.Rev.D81:072002(2010) (Vol.81, No.7, 8 April 2010); in arXiv:0910.2201 and MINOSdoc-6252. 2. E.W. Grashorn, J.K. de Jong, M.C. Goodman, A. Habig, M.L. Marshak, S. Mufson, S. Osprey, P.Schreiner, "The atmospheric charged kaon/pion ratio using seasonal variation methods," Fermilab-Pub-10-058-E, Astroparticle Physics 33,140-145 (2010) (Issue 3, 6 March 2010); in arXiv:0909.5382 and MINOS-doc-6236. 3. P. Adamson et al.(149 authors), "Search for sterile neutrino mixing in the MINOS longbaseline experiment," Fermilab-Pub-09-650-E, Phy.Rev.D81:052004 (2010)(11 March 2010); also in arXiv:1001.0336 and MINOS-doc-6028. 4. P. Adamson et al. (163 authors), "Search for muon-neutrino to electron-neutrino transitions in MINOS," Fermilab-Pub-09-443-E, Phys.Rev.Lett. 103, 261802 (2009), Issue 26, 31 December 2009; in hep-ex, arXiv:0909.4996 and MINOS-doc-5908. 5. P. Adamson et al. (154 authors), "Observation of muon intensity variations by season with the MINOS far detector," Fermilab-Pub-09-427-E, Phys.Rev.D81:012001 (2010), 6 January 2010; in arXiv:0909.4012 and MINOS-doc-3719. 6. Cabrera, P. Adamson, M. Barker, A. Belias, S. Boyd, G. Crone, G. Drake, E. Falk, P.G. Harris, J. Hartnell, L. Jenner, M. Kordosky, K. Lang, R.P. Litchfield, D. Michael, P.S. Miyagawa, R. Morse, S. Murgia, R. Nichol, T. Nicholls. G.F. Pearce, D. Petyt, D. Reyna, R. Saakyan, P. Shanahan, C. Smith, P. Symes, N. Tagg, J. Thomas, P. Vahle, A. Weber, "Comparisons of the MINOS near and far detector readout systems at a test beam," FermilabPub-09-050-E, Nucl.Instrum.Meth. A (in press, doi.10.1016 / j.nima. 2009.07.016); in arXiv:0902.1116 and MINOS-doc-5425. 7. P.A. Schreiner, J. Reichenbacher, M.C. Goodman, "Interpretation of the underground muon charge ratio," Fermilab-Pub-09-511-PPD, Astroparticle Physics 32, pp. 61-71 (2009); in arXiv:0906.3726 and MINOS-doc-5437. NanoHUB Virtual Organization 1. Michael McLennan, Rick Kennell, "HUBzero: A Platform for Dissemination and Collaboration in Computational Science and Engineering," Computing in Science and Engineering, vol. 12, no. 2, pp. 48-53, Mar./Apr. 2010, doi:10.1109/MCSE.2010.41 (URL: http://www.computer.org/portal/web/csdl/doi/10.1109/MCSE.2010.41) June 2010 Appendix 3 Page 44 2. Alejandro Strachan, Gerhard Klimeck, Mark Lundstrom, "Cyber-Enabled Simulations in Nanoscale Science and Engineering," Computing in Science and Engineering, vol. 12, no. 2, pp. 12-17, Mar./Apr. 2010, doi:10.1109/MCSE.2010.38 (URL: http://www.computer.org/portal/web/csdl/doi/10.1109/MCSE.2010.38) 3. Gerhard Klimeck, Mathieu Luisier, "Atomistic Modeling of Realistically Extended Semiconductor Devices with NEMO and OMEN," Computing in Science and Engineering, vol. 12, no. 2, pp. 28-35, Mar./Apr. 2010, doi:10.1109/MCSE.2010.32 (URL: http://www.computer.org/portal/web/csdl/doi/10.1109/MCSE.2010.32) NYSgrid Virtual Organization Publications 1. A.J. Schultz and D.A. Kofke, “Virial coefficients of model alkanes”, J. Chem. Phys (submitted). 2. A.J. Schultz and D.A. Kofke, “Sixth, seventh and eighth virial coefficients of the LennardJones model”, Mol. Phys., 107(21), 2309-2318 (2009). 3. K.M. Benjamin, A.J. Schultz, and D.A. Kofke, “Fourth and fifth virial coefficients of polarizable water”, J Phys. Chem. B 113(22), 7810-7815 (2009). Dissertation 1. Ercan Dumlupinar –Title :" CFD Studies of Dynamic Stall for Rotor Applications" Dec/2009. SBgrid Virtual Organization 1. Aoki et al. Structure of rotavirus outer-layer protein VP7 bound with a neutralizing Fab. Science (2009) vol. 324 (5933) pp. 1444-7 June 2010 Appendix 3 Page 45 STAR Virtual Organization Reference: Jerome Lauret (jlauret@bnl.gov), http://drupal.star.bnl.gov/STAR/publications 1. Balance Functions from Au+Au, d+Au, and p+p Collisions at $\sqrt{s_{NN}}$ = 200 GeV Submitted May. 13, 2010 e-Print Archives (1005.2307) : Abstract | PS | PDF 2. Higher Moments of Net-proton Multiplicity Distributions at RHIC Submitted Apr. 29, 2010 e-Print Archives (1004.4959) : Abstract | PS | PDF Data and figures: click here 3. Azimuthal di-hadron correlations in d+Au and Au+Au collisions at $\sqrt{s_{NN}}=200$ GeV from STAR Submitted Apr. 14, 2010 e-Print Archives (1004.2377) : Abstract | PS | PDF Data and figures: click here 4. Pion femtoscopy in p+p collisions at sqrt(s)=200 GeV Submitted Apr. 6, 2010 e-Print Archives (1004.0925) : Abstract | PS | PDF Data and figures: click here 5. Longitudinal scaling property of the charge balance function in Au + Au collisions at 200 GeV Submitted Feb. 12, 2010 e-Print Archives (arXiv:1002.1641) : Abstract | PS | PDF Data and figures: click here 6. Charged and strange hadron elliptic flow in Cu+Cu collisions at $\sqrt{s_{NN}}$ = 62.4 and 200 GeV Submitted Jan. 28, 2010 , published Apr. 9, 2010 Phys. Rev. C 81 (2010) 44902 e-Print Archives (arXiv:1001.5052) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase June 2010 Appendix 3 Page 46 Journal article: Phys. Rev. C server Data and figures: click here 7. Upsilon cross section in p+p collisions at sqrt(s) = 200 GeV Submitted Jan. 15, 2010 e-Print Archives (1001.2745) : Abstract | PS | PDF Data and figures: click here 8. Three-particle coincidence of the long range pseudorapidity correlation in high energy nucleus-nucleus collisions Submitted Jan. 8, 2010 e-Print Archives (0912.3977) : Abstract | PS | PDF Data and figures: click here 9. Inclusive pi^0, eta, and direct photon production in p+p and d+Au collisions at sqrt(s_NN) = 200 GeV Submitted Dec. 18, 2009 e-Print Archives (0912.3838) : Abstract | PS | PDF 10. Studying Parton Energy Loss in Heavy-Ion Collisions via Direct-Photon and ChargedParticle Azimuthal Correlations Submitted Dec. 9, 2009 e-Print Archives (0912.1871) : Abstract | PS | PDF Data and figures: click here 11. Observation of pi^+pi^-pi^+pi^- photoproduction in ultraperipheral heavy-ion collisions at sqrt(s_NN) = 200 GeV at the STAR detector Submitted Dec. 4, 2009 , published Apr. 2, 2010 Phys. Rev. C 81 (2010) 44901 e-Print Archives (0912.0604) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 12. Identified high-$p_T$ spectra in Cu+Cu collisions at $\sqrt{s_{NN}}$=200 GeV Submitted Nov. 16, 2009 e-Print Archives (0911.3130) : Abstract | PS | PDF Data and figures: click here June 2010 Appendix 3 Page 47 13. Longitudinal double-spin asymmetry and cross section for inclusive neutral pion production at midrapidity in polarized proton collisions at sqrt(s) = 200 GeV Submitted Nov. 14, 2009 , published Dec. 30, 2009 Phys. Rev. D 80 (2009) 111108 e-Print Archives (0911.2773) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. D server Data and figures: click here 14. Observation of an Antimatter Hypernucleus Submitted Oct. 29, 2009 , published Mar. 4, 2010 Science 328 (2010) 58 e-Print Archives (1003.2030) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Science server Data and figures: click here 15. Longitudinal Spin Transfer to $\Lambda$ and $\bar{\Lambda}$ Hyperons in Polarized Proton-Proton Collisions at $\sqrt{s} = 200 GeV$ Submitted Oct. 8, 2009 , published Dec. 8, 2009 Phys. Rev. D 80 (2009) 111102 e-Print Archives (0910.1428) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. D server Data and figures: click here 16. Identified particle production, azimuthal anisotropy, and interferometry measurements in Au+Au collisions at $\sqrt{\bm {s_{NN}}} =$ 9.2 GeV Submitted Sep. 23, 2009 , published Feb. 26, 2010 Phys. Rev. C 81 (2010) 24911 e-Print Archives (0909.4131) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 17. Observation of charge-dependent azimuthal correlations and possible local strong parity violation in heavy ion collisions Submitted Sep. 9, 2009 e-Print Archives (0909.1717) : Abstract | PS | PDF June 2010 Appendix 3 Page 48 Data and figures: click here 18. Azimuthal Charged-Particle Correlations and Possible Local Strong Parity Violation Submitted Sep. 9, 2009 , published Dec. 14, 2009 Phys. Rev. Lett. 103 (2009) 251601 e-Print Archives (0909.1739) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. Lett. server Data and figures: click here 19. Yields and elliptic flow of $d(\overline{d})$ and $^{3}He(\overline{^{3}He})$ in Au+Au collisions at $\sqrt{s_{_{NN}}} =$ 200 GeV Submitted Sep. 3, 2009 e-Print Archives (0909.0566) : Abstract | PS | PDF Data and figures: click here 20. Long range rapidity correlations and jet production in high energy nuclear collisions Submitted Sep. 1, 2009 , published Dec. 29, 2009 Phys. Rev. C 80 (2009) 64912 e-Print Archives (arXiv:0909.0191) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 21. Neutral Pion Production in Au+Au Collisions at $\sqrt{s_{NN}}$ = 200 GeV Submitted Jul. 16, 2009 , published Oct. 23, 2009 Phys. Rev. C 80 (2009) 44905 e-Print Archives (0907.2721) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 22. Center of mass energy and system-size dependence of photon production at forward rapidity at RHIC Submitted Jun. 12, 2009 , published Nov. 26, 2009 Nucl. Phys. A 832 (2009) 134 e-Print Archives (arXiv:0906.2260v1) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Nucl. Phys. A server June 2010 Appendix 3 Page 49 Data and figures: click here 23. Growth of Long Range Forward-Backward Multiplicity Correlations with Centrality in Au+Au Collisions at $\sqrt{s_{NN}}$ = 200 GeV Submitted May. 3, 2009 , published Oct. 21, 2009 Phys. Rev. Lett. 103 (2009) 172301 e-Print Archives (0905.0237) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. Lett. server Data and figures: click here 24. Perspectives of a Midrapidity Dimuon Program at RHIC: A Novel and Compact Muon Telescope Detector Submitted Apr. 30, 2009 , published Jul. 17, 2009 J. Phys. G 36 (2009) 95001 e-Print Archives (0904.3774) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: J. Phys. G server 25. System size dependence of associated yields in hadron-triggered jets Submitted Apr. 13, 2009 , published Dec. 16, 2009 Phys. Lett. B 683 (2010) 123 e-Print Archives (0904.1722) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Lett. B server Data and figures: click here 26. J/psi production at high transverse momentum in p+p and Cu+Cu collisions at $\sqrt{s_{NN}}$ = 200 GeV Submitted Apr. 2, 2009 , published Oct. 27, 2009 Phys. Rev. C 80 (2009) 41902 e-Print Archives (arXiv:0904.0439) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 27. Pion Interferometry in Au+Au and Cu+Cu Collisions at RHIC Submitted Mar. 6, 2009 , published Aug. 24, 2009 Phys. Rev. C 80 (2009) 24905 e-Print Archives (0903.1296) : Abstract | PS | PDF June 2010 Appendix 3 Page 50 SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. C server Data and figures: click here 28. K/pi Fluctuations at Relativistic Energies Submitted Jan. 12, 2009 , published Aug. 24, 2009 Phys. Rev. Lett. 103 (2009) 92301 e-Print Archives (arXiv:0901.1795v1) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. Lett. server Data and figures: click here 29. Measurement of D* Mesons in Jets from p+p Collisions at sqrt(s) = 200 GeV Submitted Jan. 6, 2009 , published Jul. 1, 2009 Phys. Rev. D 79 (2009) 112006 e-Print Archives (0901.0740) : Abstract | PS | PDF SLAC-Spires HEP: Entry|Cited by|Citebase Journal article: Phys. Rev. D server Data and figures: click here June 2010 Appendix 3 Page 51