Diagnostics of infectious diseases Lab: 6 Antimicrobial Susceptibility Testing Minimal Inhibitory Concentration (MIC) Test 2.9.1.1 Principle The agar dilution technique is used to measure qualitatively the invitro activity of an antimicrobial agent against the test bacteria. In this method, graded amounts of antibiotics are incorporated in agar plates and inoculated in spots with the organisms under study. If the organism under study is susceptible to the incorporated antibiotic, no bacterial growth is expected in agar plates with higher concentrations of the drugs. Bacterial growth is observed as the antibiotic concentration in the agar plate diminishes. Inhibition of growth at the minimum or lowest concentration of antibiotic is regarded as the end point. 2.9.1.2 Procedure for MIC The minimal inhibitory concentration (MIC) test was performed using MuellerHinton Agar (MHA), which is the best medium and gives satisfactory growth of most bacterial pathogens. The media was made by adding 3.8 gram of Muller Hinton Agar in 100 ml of distilled water. The agar was mixed thoroughly in distilled water and kept in autoclave for 45 min at 121ºC. After 45 minutes the media was kept outside and allowed it to cool to the extent that it should not solidify. After cooling the calculated amount of media was withdrawn from the flask. The formula used to calculate the volume of the media to be replaced by equal amount of stock solution of the drug is given in Figure 2.9.The amount of media that was taken out from the flask was calculated according to the different concentrations which I had selected to find out the range of MIC. The amount of media that was withdrawn and the amount from stock solutions of drugs that was added in the media are shown in Appendix-B (Table 2.1, Table 2.2, Table 2.3 and Table 2.4) for drugs during the process of calculating MIC. After adding the calculated drug from stock solution in MHA, the media was poured in sterile petri dishes. These petri dishes were labeled according to the names and concentrations of drugs made. These plates were kept at room temperature and allowed to solidify. When the media was solidified then the plates were placed in incubator at 37º C for 24 hrs. Formula Used To Make Different Concentrations Of Drug: C1V1=C2V2 FIG URE 2.9 C1 = Concentration of Media that is selected to calculate MIC e.g. 2000, 2500 etc For mula used V1 = Volume of Media that is needed for MH agar plates to calcu late C2 = Concentration of Stock Solution the volu V2 = Volume of Stock Solution that is added after removing same volume from media to achieve desired concentration of media me of the medi a 2.9.1.3 Preparation of Antimicrobial Agent Stock Solution Stock solution was made by dissolving specified amount of drug in pararticular solvent. The drugs which were used for calculating MIC in this procedure were commonly used antibiotics for UTI. The list of these antimicrobial agents according to their solvent is given in Table 2.5. 2.9.1.3.1 Preparation of Stock Solution of Sulphamethoxazole Stock solution of Sulphamethoxazole was made by dissolving 0.5g of the drug in 2.5ml of Sodium Hydroxide, when the drug was dissolved then the distilled water was added to make total volume up to 10ml in a sterile falcon tube. This stock solution was kept in refrigerator for use. 2.9.1.3.2 Preparation of Stock Solution of Trimethoprim Stock solution of Trimethoprim was made by adding 0.5g of the drug in 2.5ml of Acetic acid, when the drug was dissolved then the distilled water was added as a diluent to make total volume up to 10ml. 2.9.1.3.3 Preparation of Stock Solution of Cefotaxime Stock solution of Cefotaxime was made by adding 0.1g of the drug in 10ml of distilled water. 2.9.1.3.4 Preparation of Stock Solution of Ciprofloxacin Stock solution of Ciprofloxacin was made by adding 0.1g of the drug in 10ml of distilled water. 2.9.1.4 Preparation of Inoculum Inoculum was prepared from a pure 18-24 hour bacterial culture, 4-5 isolated colonies (to minimize the risk of picking bacteria which have lost their resistance) was picked and subculture to a tube having 3 ml of nutrient broth. This nutrient broth was made TABLE 2.5 List of Solvents and Diluent List of Solvents and Diluents needed for the Preparation of Stock Solutions of Antimicrobial Agents S/NO ANTIMICROBIAL AGENT SOLVENT DILUENT SODIUM HYDROXIDE (NaOH) DISTILLED 1 SULPHAMETHOXAZOLE 2 TRIMETHOPRIM ACETIC ACID 2.5 ml 3 CEFOTAXIME DISTILLED WATER 4 CIPROFLOXACIN DISTILLED WATER 2.5ml WATER DISTILLED WATER DISTILLED WATER DISTILLED WATER by adding 0.3 gram of beef extract and 0.5 gram of peptone in 100ml of distilled water .Then this mixture was autoclaved for 45 minute at 121ºC. Inoclum was made in glass test tubes by adding few drops of 24 hrs bacterial culture in 1ml of Nutrient broth .This was kept in incubator for 24 hrs at 37ºC for growth of bacteria. 2.9.1.5 Preparation of antimicrobial agar plates The empty sterile plates were labeled in order to identify the antimicrobial agent and their concentrations. The label was placed on the upper portion of the bottom side of the petri dish to ensure that the plate is inserted at the correct point. A scheme was drawn to locate each bacterial strain on the outer layer of bottom of petri dish. Before putting the drop of inoculum on drug containing MHA plates the Turbidity of these test tubes were checked by matching it with standard Macfarland solution in a test tube. When the inoculums in test tubes were found turbid as compared to Macfarland solution, then they were diluted by adding more Nutrient broth into it. A drop of 5 µl of fresh inoculums (prepared 24 hrs before) was placed on drug containing MHA plates. This drop was placed on the specified spot as labeled on the plate according to the sample number. The whole procedure was carried out under aseptic condition near the flame. There was at least two replicate of each concentration. Then these plates were kept for drying so that drop of inoculum may not spread around, otherwise it become difficult to read the result. The method of labeling and labeled plate is shown in Figure 2.10 & 2.11, respectively. FIGURE 2.10. Method of Labelling FIGURE 2.11. Labelled Plate FIGURE 2.12 2.9.1.6 MH Agar Plates of Different Concentrations for MIC Control agar plates/Drug-free agar plates Prepare control agar plates by pipetting 10 ml of MHA into a sterile petri dish. No antimicrobial agent was added into it. MH agar plates of different concentration for MIC are shown in Figure 2.12. 2.9.1.7 Inoculation sequence The plates were inoculated according to the concentrations made, starting from lowest to highest concentration. 2.9.1.8 Incubation The inoculated agar plates were kept at room temperature until the moisture in the inoculum spot was absorbed by the agar or until all spots became dry. The plates were incubated in an inverted position at 370C for 24 hours (The incubation time is extremely important to obtain reliable end points when reading the results). 2.9.1.9 The Reading of MIC Values plates were observed after 24 hours to read the results. When the growth was seen at the specified spots, bacterial growth was again cultured on MHA plates. The whole process was repeated again. When there was no growth on the labeled spots it was considered the MIC value in relation with the particular samples. Bacterial growth was observed in control plates as well (Note: if there would have been no growth, then test would have to be repeated). MIC values were recorded at lowest concentration of antimicrobial agent. 2.9.2 Calculation of Minimum Bactericidal Concentrations Once an MIC has been performed a minimum bactericidal concentration (MBC) can subsequently be determined. The MBC is set up with subcultures made from each MIC well that appeared visually clear. These subcultures from MIC plates were mixed in 1 – 2 ml of nutrient broth in test tubes and kept in incubator for 24 hrs at 37ºC for the growth of bacteria. After 24 hrs when these test tubes were observed, when no growth was seen it means that the concentration of that particular plate was MBC value not MIC value. But if growth was seen in this subculture it was suggesting that it was MIC value not MBC value. So to calculate MBC further concentration was made to check the exact value. MIC values cannot be determined without following up with an MBC test. After incubation, the MBC dilution tubes will either be turbid with growth or they will be clear. A tube without turbid growth will result from one of two possible events. Either the challenge microorganisms were killed by the test product, or they were inhibited by the test product. A subculture tube that becomes turbid after incubation indicates that the test product was inhibitory at that dilution for that particular organism. If the subculture tubes remain negative after incubation, this indicates that the test product is lethal at that concentration for that particular organism.