Prognostic impact of allogeneic hematopoietic stem cell transplantation for acute myeloid leukemia patients with internal tandem duplication of FLT3 Po-Han Lin1,2,4,8, Ching-Chan Lin2,4, Hwai-I Yang4, Long-Yuan Li6, Li-Yuan Bai2, Chang-Fang Chiu2,5, Yu-Min Liao2, Chen-Yuan Lin2,4, Ching-Yun Hsieh2,4, Chien-Yu Lin3, Cheng-Mao Ho3, Shu-Fen Yang3, Ching-Tien Peng3, Fuu-Jen Tsai1,7, Su-Peng Yeh2,5 1 Department of Medical Genetics; 2Division of Hematology and Oncology, Department of Internal Medicine; 3Department of Laboratory Medicine; China Medical University Hospital, Taichung, Taiwan 4 Graduate Institute of Clinical Medicine; 5Internal Medicine, College of Medicine; 6 Center for Molecular Medicine and Graduate Institute of Cancer Biology; 7 Graduate Institute of Integrated Medicine, College of Chinese Medicine; China Medical University, Taichung, Taiwan 8 Department of Medical Genetics, National Taiwan University Hospital, Taipei, Taiwan Correspondence to: Su-Peng Yeh, Department of Internal Medicine, China Medical University Hospital, Taichung, Taiwan 2, Yu-De Rd. 404, Taichung City, Taiwan Tel: +886-4-22052121 ext. 5031 Fax: +886-4-22337675 E-mail: supengyeh@gmail.com Running title: Allogeneic HSCT for AML with FLT3-ITD Text number: 2887 Total tables and figures: 6 1 Abstract The FLT3 gene with internal tandem duplication (ITD) is a poor prognostic factor in patients with acute myeloid leukemia (AML), and the efficacy of allogeneic hematopoietic stem cell transplantation (HSCT) for AML patients with FLT3-ITD is controversial. We examined 122 AML patients; 34 patients had FLT3-ITD and 39 patients received allogeneic HSCT. The median overall survival (OS) of patients with wtFLT3/nonHSCT, wtFLT3/HSCT, FLT3-ITD/nonHSCT and FLT3-ITD/HSCT was 40.7 months, 53.4 months, 9.8 months and not reached, respectively (p=0.006). Compared to the wtFLT3/nonHSCT patients, the hazard ratio (95% CI) of OS for wtFLT3/HSCT, FLT3-ITD/nonHSCT and FLT3-ITD/HSCT was 1.39 (0.61-3.18), 3.57 (1.58-8.10) and 0.40 (0.11-1.59), respectively, after adjustment of age, sex, WBC, LDH, karyotype, NPM, and FAB classification. This result indicated that patients with FLT3-ITD/nonHSCT had a significantly worse outcome, but allogeneic HSCT improved the prognosis for patients with FLT3-ITD. Key words: Acute myeloid leukemia; FLT3; Allogeneic hematopoietic stem cell transplantation 2 Introduction Acute myeloid leukemia (AML) is a heterogeneous disease characterized as impaired differentiation and an accumulation of myeloid blasts. In recent decades, the survival of younger AML patients (less than 60 years) has improved because of the application of intensive treatment and the best supportive care [1]. The complete remission rate (CR) rate is about 80% after the first induction chemotherapy; however, AML relapses in more than half of patients, and most of these patients die from AML [1, 2]. To reduce the relapse rate, attention over the past decade has been focused on post-remission strategies to consolidate remission; including high-dose cytarabine, autologous hematopoietic stem cell transplantation (HSCT) and allogeneic HSCT [3-6]. The post-remission treatment strategies are generally guided by the prognostic classification [2, 7]. For younger patients with an unfavorable karyotype and a suitable available donor, allogeneic HSCT is a preferred option [6, 8, 9]. The beneficial effect of allogeneic HSCT in those with an unfavorable karyotype was documented in a previous meta-analysis [10]. However, about 50% of AML patients do not have cytogenetic changes, and several genetic mutations have also influenced patient survival [2, 11]. One of these genetic mutations is an internal tandem duplication (ITD) in the juxtamembrane domain of the tyrosine kinase receptor gene fms-like tyrosine kinase receptor-3 (FLT3) [12]. The ITD is mainly the duplication of the FLT3 exon 14 sequence and the transcript is always preserved, causing disruption of the auto-inhibition of the tyrosine kinase domain [13]. This genetic change leads to constitutive activation of downstream signaling, increasing the proliferation and survival of leukemic cells as well as inferior patient survival [12, 13]. 3 Whether allogeneic HSCT can overcome the poor risk of FLT3-ITD in AML patients is still controversial. One prior retrospective study showed a lack of evidence of FLT3-ITD as an indicator for patients receiving allogeneic HSCT [14]. However, a few studies considered that allogeneic HSCT could improve the survival of patients with FLT3-ITD [15-17]. To further investigate this question, we retrospectively analyzed the prognostic role of allogeneic HSCT in AML patients with and without FLT3-ITD in our institution. Our results suggested that AML patients with FLT3-ITD might benefit from allogeneic HSCT in terms of survival. 4 Materials and Methods Patients A total of 122 patients who were newly diagnosed as having de novo AML and received intensive chemotherapy with or without allogeneic HSCT at China Medical University Hospital from January 2003 to December 2010 were retrospectively analyzed. The diagnosis of AML was based on the World Health Organization (WHO) definition. At diagnosis, all patients underwent blood testing for their hemogram and biochemistry panel. Bone marrow cells were aspirated for morphologic examination, myeloperoxidase and non-specific esterase staining, cytogenetic and immunophenotyping study. Bone marrow samples were also collected after the patients had signed informed consent. The mononuclear cells were isolated by Ficoll-Hypaque gradient and cryopreserved in the biobank. This study was approved by the Institutional Review Board of China Medical University Hospital. Chemotherapy Patients who received intensive chemotherapy were enrolled in this study. The definition of intensive chemotherapy was anthracycline for 3 days and cytarabine 100-200 mg/m2 per day on days 1-7 as induction chemotherapy. After complete remission (CR) was achieved, patients received high-dose cytarabine (HDAC; 2-3 g/m2 per day on days 1, 3 and 5) with or without one anthracycline treatment, as consolidative chemotherapy. For patients with relapsed AML, salvage chemotherapy was used, based on patient performance and physician decision at the time, and the treatment goal was planned as a second remission. The salvage chemotherapy regimen included MEC (mitoxantrone 8 mg/m2 on days 1-3, etoposide 100 mg/m2 on days 1-5, and cytarabine 75 mg/m2/q 5 12 hrs on days 1-5), FLAG (fludarabine 30 mg/m2 on days 1-5, cytarabine 2000 mg/m2 on days 1-5 and G-CSF 300 μg QD on days 0-6), as well as N3A7 (mitoxanthrone 8 mg/m2 on days 1-3 and cytarabine 100-200 mg/m2 per day on days 1-7) and N3-HDAC (mitoxanthrone 8 mg/m2 on days 1-3 and HDAC). Allogeneic HSCT Allogeneic HSCT was performed on the basis of consensus in this institute. The main reasons for patients with a first remission undergoing HSCT were suitable donor availability and poor risk factors, including unfavorable karyotype, extramedullary involvement and high white blood cell (WBC) count at the initial diagnosis. Allogenic HSCT was planned for all relapsed patients. Patients with relapsed disease were treated with salvage chemotherapies first. Then, if a suitable donor was available, patients would receive allogeneic HSCT when their disease status achieved CR or at least a good partial response (the bone marrow blast > 50% reduction). In this cohort, all patients were treated with myeloablative conditioning chemotherapy, from either a sibling or an unrelated donor. The myeloablative conditioning regimen was composed of busulfan at 3.2 mg/kg/day intravenously, given at daily divided doses on days -7 to -4, followed by cyclophosphamide at 60 mg/kg intravenously on days -3 and -2; or fludarabine at 30 mg/kg/day intravenously, given in daily divided doses on days -6 to -2, and busulfan at 3.2 mg/kg/day intravenously on days -5 and -2. Antithymocyte globulin (ATG) was administrated when a donor was unrelated. The total dose of ATG was 6-8 mg/kg divided into 5 consecutive days. Graft-versus-host disease (GVHD) prophylaxis was the institutional standard for intravenous cyclosporine 4 mg/kg/day given from day -1, and methotrexate 15 mg/m2 6 on days +1, +3, and +6 for sibling donors. For unrelated donors, patients received intravenous cyclosporine 4 mg/kg/day given from day -1 and mycophenolate mofetil was added post-transplantation. All of the supportive managements were given according to the protocol. Granulocyte colony-stimulating factor was given daily till the WBC count was more than 4000/mm3. For infection prophylaxis, all patients received ciprofloxacin, fluconazole, acyclovior and sulfamethoxazole-trimethoprim till the WBC count was more than 4000/mm3. Parenteral nutrition and glutamine were provided when patients had severe mucositis. Cytomegalovirus (CMV)-pp65 antigen was monitored every week till 100 days post-transplantation or the patient was seronegative. Ganciclovir was used for pre-emptive therapy when CMV antigenemia and anti-CMV gammaglobulin was used for CMV disease, such as CMV pneumonitis or colitis. Detection of FLT3-ITD mutation FLT3-ITD was detected by polymerase chain reaction carried out with a master mixture (Roche Diagnostics), DNA templates and a pair of primers: Forward: GCAATTTAGGTATGAAAGCCAGC and Reverse: CTTTCAGCATTTTGACGGCAACC. The temperature cycling parameters were: 95°C for 2 min; 30 cycles of 95°C for 30 s, 56°C for 30 s; followed by 72°C for 2 min. The amplified products were separated in a 3% gel of Agarose 3:1 High Resolution Blend. The size of wild-type FLT3 (wtFLT3) was 329 bp. FLT3-ITD was longer than wtFLT3, and two bands were identified for heterogeneous FLT3-ITD patients. Then, all of the FLT3-ITD was confirmed by two-sided direct dye sequencing. Statistical analysis OS was estimated by Kaplan-Meier analysis. The X2 test and Fisher's exact test were 7 used to calculate the significance of variances between each group. Cox proportional hazards regression analysis was used to estimate the hazards ratios of OS and corresponding 95% confidence interval (CI) for various combinations of FLT3-ITD and HSCT status. All p values are 2-sided and p values less than 0.05 are considered as significant. Results Patient characteristics One hundred twenty-two patients, consisting of 57 females and 65 males with a median age of 45.0 years (range, 11.7-79.0 years), were enrolled in this study. FLT3-ITD was detected in 34 patients (27.9%). Patients with FLT3-ITD had a significantly higher WBC count (mean ± S.D.; 37.2 ± 75.0 x 106/L vs. 85.7 ± 83.8 x 106/L, p=0.002) and a higher serum lactate dehydrogenase level (452.4 ± 455.5 vs. 1021.7 ± 2301.4, p=0.028), but the levels of hemoglobin and platelets did not differ. There were no differences in other clinical and laboratory characteristics, including age, sex, FAB classification, karyotype, immunophenotype and NPM mutation (Table 1). Survival analysis The median OS for the entire cohort was 23.0 months (Figure 1A). In the conventional karyotype stratification, the median OS for favorable, intermediate and unfavorable cytogenetic patients was not reached, 32.3 and 17.7 months, respectively (p=0.048). The median OS of patients with FLT3-ITD was significantly shorter than that for patients with wtFLT3 (Figure 1B; median OS 44.0 months vs. 18.0 months, p=0.023). Subgroup analysis showed that FLT3-ITD was associated with shorter OS in patients with an intermediate-risk karyotype (N=80) and in those with a normal 8 karyotype (N=80, median OS 53.4 months vs. 13.0 months, p=0.003; N=60, median OS not reached vs. 9.8 months, p=0.009). Association of allogeneic HSCT with disease outcome Thirty-nine patients (32.0%) received allogeneic HSCT, including 21 with a first CR (CR1), 8 with a second CR, 8 with a third CR and 2 without remission. The median OS of patients with allogeneic HSCT was longer than that of patients without HSCT (Figure 1C; 53.4 months vs. 19.1 months, p=0.043). Prognostic values of allogeneic HSCT in context with or without FLT3-ITD for patients In order to study the prognostic impact of allogeneic HSCT on FLT3 gene status, we divided this cohort into 4 subgroups, based on FLT3 and HSCT (Table 2): wtFLT3/nonHSCT (N=59), wtFLT3/HSCT (N=29), FLT3-ITD/nonHSCT (N=24) and FLT3-ITD/HSCT (N=10). The patients with wtFLT3 (N=88) treated with allogeneic HSCT were significantly younger (years; 33.4 ± 9.9 vs. 48.2 ± 14.5, p<0.001) and tended to have higher WBC and LDH than those without allogeneic HSCT. The patients with FLT3-ITD (N=34) treated with allogeneic HSCT also were significantly younger (years; 40.3 ± 12.5 vs. 48.5 ± 8.4, p<0.001), had a higher WBC count (mean ± S.D.; 152.4 ± 107.9 x 106/L vs. 57.9 ± 52.7 x 106/L, p=0.002) and tended to have higher LDH than those without allogeneic HSCT. Other clinical variances, including FAB types, karyotypes and NPM mutation, did not differ. The chemotherapy CR rate did not differ among the 4 subgroups (wtFLT3/nonHSCT, wtFLT3/HSCT, FLT3-ITD/nonHSCT and FLT3-ITD/HSCT: 79.7%, 93.1%, 75.0% and 90.0%, respectively; p=0.266). Fifty-six of the patients died during an overall 9 follow-up period of 238.77 years; the death rate (death/person-year) was 19.28%, 18.36%, 65.69% and 11.20% in patients with wtFLT3/nonHSCT, wtFLT3/HSCT, FLT3-ITD/nonHSCT and FLT3-ITD/HSCT, respectively (Table 3). The median OS of patients with FLT3-ITD/nonHSCT (9.8 months) was significantly shorter than the median OS of those with wtFLT3/HSCT (53.4 months), wtFLT3/nonHSCT (40.7 months), and FLT3-ITD/HSCT (not reached; p=0.006). This survival result shows that when FLT3-ITD patients received allogeneic HSCT (subgroup: FLT3/ITD-HSCT), the death rate and median OS were similar to that of patients with wtFLT3 and significantly better than that of patients with FLT3-ITD without allogeneic HSCT (Figure 1D). Subgroup analysis was performed for limiting patients with CR1 status. 21 of 39 patients of HSCT group received HSCT at CR1 disease status and 65 of 83 patients of nonHSCT group archived CR after induction chemotherapy. Among all the 86 patients evaluated following CR1, the median OS of patients with FLT3-ITD/nonHSCT (N=18, 17.1 months) was also significantly shorter than the median OS of those with wtFLT3/HSCT (N=17, 53.4 months), wtFLT3/nonHSCT (N=47, not reached), and FLT3-ITD/HSCT (N=4, not reached, p=0.047; figure 1E). This result was similar to the total patient cohort. Univariate analysis of the entire cohort showed that unfavorable karyotype was a poor prognostic factor (hazard ratio = 2.43; 95% CI, 1.00-5.87; p=0.0492) for OS, and that FAB-M3 was a factor with a favorable trend (hazard ratio = 0.16; 95% CI, 0.02-1.16; p=0.0703). Of the 4 subgroups, FLT3-ITD/nonHSCT had the most significant negative impact on OS (hazard ratio = 3.28; 95% CI, 1.56-6.89; p=0.0017), especially when compared to wtFLT3/nonHSCT. In multivariate analysis of the 4 groups, the independent favorable prognostic factor for OS was FAB-M3 (hazard ratio = 0.10; 95% CI, 0.01-0.80; p=0.0297), and the significantly poor risk factor was 10 FLT3-ITD/nonHSCT (hazard ratio = 3.57; 95% CI, 1.58-8.10; p=0.0023), after adjustment for age, sex, WBC, LDH, karyotype, FAB classification and NPM mutation. However, this poor risk with FLT3-ITD became inconsiderable when those patients received allogeneic HSCT (subgroup: FLT3-ITD/HSCT; hazard ratio = 0.41; 95% CI, 0.11-1.59; p=0.20). Discussion Our results provide evidence that AML patients with FLT3-ITD and without allogeneic HSCT have the worst survival. Allogeneic HSCT improves the clinical outcome of AML patients with FLT3-ITD. FLT3-ITD disrupts the normal auto-inhibition in the tyrosine kinase domain and leads to AML cell proliferation and survival [12, 13]. From previous clinical studies, the patients with FLT3-ITD are sensitized to induction chemotherapy, but usually have a greater relapse rate and a shorter duration after remission [12, 18]. These features are indeed observed in the present cohort. The CR rates of patients with and without FLT3-ITD are 84.1% and 79.4%, respectively (p=0.539); the disease relapse rate of patients with and without FLT3-ITD is 73.5% and 53.4%, respectively (p=0.043). Therefore, post-remission consolidative treatment is the key factor in deciding the patient's long-term OS. In our study, we found that patients with FLT3-ITD treated with allogeneic HSCT had a long-term OS similar to patients with wtFLT3 (Figure 1D). However, a 2.57-fold increase in death and significantly shorter OS were observed in patients with FLT3-ITD without allogeneic HSCT. These results may indicate that allogeneic HSCT is a better consolidative therapy than chemotherapy alone, and is potentially a preferred option to negate the poor risk factor of FLT3-ITD. 11 However, Gale and colleagues at the Medical Research Council of the United Kingdom concluded that FLT3 status was not evidently an indicator for HSCT in AML patients [14] (Table 5). They compared the patient group of “auto HSCT versus non-HSCT”, “autograft versus allograft” and “donor” versus “no donor”, and found that FLT3-ITD was still a prognostic factor for relapsed status, with or without HSCT. No direct comparison of allogeneic HSCT and chemotherapy alone was discussed but the author replied that the OS was not significantly improved in the allograft recipients when compared with patients received chemotherapy alone and autograft [15, 16]. They concluded that insufficient evidence to support allogeneic HSCT improving prognosis of FLT3-ITD patients [14-16]. However, in the “donor” versus “no donor” analysis, their figure 5 indeed showed the relapsed rate was significantly decreased in “donor” group of patients with FLT3-ITD (donor vs. no donor: 44.1% vs. 71.1%; hazard ratio = 0.59; 95% CI, 0.40-0.87). The 5-year survival rate was only 43% in the “donor” group, and this might indicate the reasons of death were not all contributed form AML. In 2 other studies, Bornhauser et al and Amy E. et al [17, 18] performed retrospective analyses of patients in the AML96 study of the German study group and from a single medical institution, and found improved OS in patients with FLT3-ITD when undergoing HSCT. Salut Brunt et al. retrospectively analyzed HSCT patients from the AML96 study, and found that FLT3-ITD still affected the OS of patients receiving allogeneic HSCT [19]. However, the 2-year leukemia-free survival of those with FLT3-ITD and HSCT was 58%, which was much better than the historical control of FLT3 patients. The author concluded that allogeneic HSCT had a relevant role in managing the patient group. In the present study, more than half of FLT3 patients receiving HSCT are alive and free of leukemia (Figure 1D). Taken together, previous analyses and our results show that allogeneic HSCT might have an impact on improving OS in patients with FLT3-ITD. 12 All of the above studies are retrospective analyses (Table 5), and several same and different biases are present in our study and prior studies. First, patients without CR1 were not enrolled in previous four studies. In our study, we analyze the total patient cohort that enrolled CR1 and nonCR1 patients, and also do subgroup analysis limiting the CR1 patients. Both results show that patients with FLT3-ITD/nonHSCT have the significant worse prognosis and allogeneic HSCT improves the FLT3-ITD patients’ survival. Among the FLT3-ITD patients of our study, 6 patients received HSCT under nonCR1 status and 4 of them are alive. Compared with FLT3-ITD/nonHSCT group, 3 primary refractory patients and 13 relapsed patients receiving salvage chemotherapy, 15 of them died on the disease (supplement table 1). Although the patient number is limited, our data to the first show that patients with FLT3-ITD could get benefit from allogeneic HSCT even beyond CR1. Second, the FLT3-ITD patients have a higher relapse rate and shorter remission duration; some FLT3-ITD patients do not have CR status. Patients with an early relapse or nonCR status have less opportunity to enter HSCT. This subgroup of patients may also have poor biological characteristics, which may have contributed to the poor outcome of the patients with FLT3-ITD/nonHSCT. However, this subgroup is not included in the survival analyses in both previous and the present studies. That is a reason for the good survival rate (58%) demonstrated by Salut Brunt et al [19]. Third, other genetic factors also influence patient survival, but they are not included in the analyses in prior studies and in ours [2, 11]. Even with those confounding factors, allogeneic HSCT indeed improve the prognosis in some FLT3-ITD patients. Base on prior and our studies, we suggest that early preparation and performance of allogeneic HSCT in FLT3-ITD patients is a preferred choice. In summary, the presence of FLT3-ITD correlates with a higher relapse rate and worse 13 survival [20]. Our study suggests that allogeneic HSCT significantly improves the outcome of patients with FLT3-ITD. Tyrosine kinase inhibitors of FLT3 have been developed, but many of them showed only a transient effect in reducing myeloid blast, and the long-term treatment effect in combination with chemotherapy is still unknown [21, 22]. On the basis of previous studies and our analysis, we conclude that allogeneic HSCT is currently the preferred policy for patients with FLT3-ITD. 14 References 1. 4. 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