Natalia Tretyakova
Masonic Cancer Center
Kotapati, Srikanth, Dewakar Sangaraju, Amanda Esades, Lance Hallberg, Vernon E.
Walker, James A. Swenberg, and Natalia Tretyakova. 2014. Bis-butanediolmercapturic acid (bis-BDMA) as a urinary biomarker of metabolic activation of butadiene to its ultimate carcinogenic species. Carcinogenesis 35, (6) (JAN 01),
10.1093/carcin/bgu047.
Kowal, Ewa A., Uthpala Seneviratne, Susith Wickramaratne, Kathleen E. Doherty,
Xiangkun Cao, Natalia Tretyakova, and Michael P. Stone. 2014. Structures of exocyclic R,R - and S,S - N
6
, N
6
-(2,3-dihydroxybutan-1,4-diyl)-2’-deoxyadenosine adducts induced by 1,2,3,4-diepoxybutane. Chemical Research in Toxicology 27, (5)
(MAY 19), 10.1021/tx400472p.
Kowal, Ewa A., Susith Wickramaratne, Srikanth Kotapati, Michael Turo, Natalia
Tretyakova, and Michael P. Stone. 2014. Major groove orientation of the (2S)-N
6
-(2hydroxy-3-buten-1-yl)-2’-deoxyadenosine DNA adduct induced by 1,2-epoxy-3butene. Chemical Research in Toxicology 27, (10) (OCT 20), 10.1021/tx500159w.
Ming, Xun, Brock Matter, Matthew Song, Elizabeth Veliath, Ryan Shanley, Roger Jones, and Natalia Tretyakova. 2014. Mapping structurally defined guanine oxidation products along DNA duplexes: Influence of local sequence context and endogenous cytosine methylation. Journal of the American Chemical Society 136, (11) (MAR 19),
10.1021/ja411636j.
Sangaraju, Dewakar, Peter W. Villalta, Susith Wickramaratne, James Swenberg, and
Natalia Tretyakova. 2014. Erratum to: NanoLC/ESI
+
HRMS
3
quantitation of DNA adducts induced by 1,3-butadiene ( Journal of the American Society for Mass
Spectrometry DOI: 10.1007/s13361-014-0916-x). Journal of the American Society for
Mass Spectrometry 25 (9) (JAN 01): 1674.
Sangaraju, Dewakar, Peter W. Villalta, Susith Wickramaratne, James Swenberg, and
Natalia Tretyakova. 2014. NanoLC/ESI
+
HRMS
3
quantitation of DNA adducts induced by 1,3-butadiene. Journal of the American Society for Mass Spectrometry 25
(7) (JAN 01): 1124-35.
Wickramaratne, Susith, and Natalia Tretyakova. 2014. Structure elucidation of DNAprotein crosslinks by using reductive desulfurization and liquid chromatographytandem mass spectrometry. Chembiochem: A European Journal of Chemical Biology
15, (3) (FEB 10), 10.1002/cbic.201300757.
Yeo, Jung Eun, Susith Wickramaratne, Santoshkumar Khatwani, Yen-Chih Wang,
Jeffrey Vervacke, Mark D. Distefano, and Natalia Tretyakova. 2014. Synthesis of site-specific DNA-protein conjugates and their effects on DNA replication. ACS
Chemical Biology 9, (8) (AUG 15), 10.1021/cb5001795.
Burns, Michael B., Lela Lackey, Michael A. Carpenter, Anurag Rathore, Allison M.
Land, Brandon Leonard, Eric W. Refsland, et al. [Natalia Tretyakova] 2013.
APOBEC3B is an enzymatic source of mutation in breast cancer. Nature 494, (7437)
(FEB 21), 10.1038/nature11881.

Natalia Tretyakova
Masonic Cancer Center
Burns, Michael B., Lela Lackey, Michael A. Carpenter, Anurag Rathore, Allison M.
Land, Brandon Leonard, Eric W. Refsland, et al. [Natalia Tretyakova] 2013. Erratum:
APOBEC3B is an enzymatic source of mutation in breast cancer ( Nature (2013) 494
(366-370) DOI: 10.1038/nature11881). Nature 502 (7472) (JAN 01): 580.
Gherezghiher, Teshome B., Xun Ming, Peter W. Villalta, Colin Campbell, and Natalia
Tretyakova. 2013. 1,2,3,4-diepoxybutane-induced DNA-protein cross-linking in human fibrosarcoma (HT1080) cells. Journal of Proteome Research 12, (5) (MAY
03), 10.1021/pr3011974.
Kotandeniya, Delshanee, Daniel Murphy, Shuo Yan, Soobong Park, Uthpala Seneviratne,
Joseph S. Koopmeiners, Anthony Pegg, Sreenivas Kanugula, Fekadu Kassie, and
Natalia Tretyakova. 2013. Kinetics of O
6
-pyridyloxobutyl-2'-deoxyguanosine repair by human O
6
-alkylguanine DNA alkyltransferase. Biochemistry 52, (23) (JUN 11),
10.1021/bi4004952.
Sangaraju, Dewakar, Peter W. Villalta, Melissa Goggin, Maria O. Agunsoye, Colin
Campbell, and Natalia Tretyakova. 2013. Capillary HPLC-accurate mass MS/MS quantitation of N7-(2,3,4-trihydroxybut- 1-yl)-guanine adducts of 1,3-butadiene in human leukocyte DNA. Chemical Research in Toxicology 26, (10) (JAN 01),
10.1021/tx400213m.
Tretyakova, Natalia, Erin D. Michaelson-Richie, Teshome B. Gherezghiher, Jamie Kurtz,
Xun Ming, Susith Wickramaratne, Melissa Campion, Sreenivas Kanugula, Anthony
E. Pegg, and Colin Campbell. 2013. DNA-reactive protein monoepoxides induce cell death and mutagenesis in mammalian cells. Biochemistry 52, (18) (MAY 07),
10.1021/bi400273m.
Tretyakova, Natalia, Peter W. Villalta, and Srikanth Kotapati. 2013. Mass spectrometry of structurally modified DNA. Chemical Reviews 113, (4) (APR 10),
10.1021/cr300391r.
Wickramaratne, Susith, Shivam Mukherjee, Peter W. Villalta, Orlando D. Scharer, and
Natalia Tretyakova. 2013. Synthesis of sequence-specific DNA-protein conjugates via a reductive amination strategy. Bioconjugate Chemistry 24, (9) (SEP 18),
10.1021/bc400018u.
Johnson, L'Aurelle A., Bhaskar Malayappan, Natalia Tretyakova, Colin Campbell,
Margaret L. Macmillan, John E. Wagner, and Pamala A. Jacobson. 2012. Formation of cyclophosphamide specific DNA adducts in hematological diseases. Pediatric
Blood & Cancer 58, (5) (MAY 01), 10.1002/pbc.23254.
Johnson, L'Aurelle A., Natalia Tretyakova, and Pamala A. Jacobson. 2012. Obesity effects on cyclophosphamide-induced DNA damage in hematopoietic cell transplant recipients. In Vivo (Athens, Greece) 26 (5) (SEP 01): 853-7.
Kotapati, Srikanth, Leena Maddukuri, Susith Wickramaratne, Uthpala Seneviratne,
Melissa Goggin, Matthew G. Pence, Peter W. Villalta, F. Peter Guengerich, Lawrence

Natalia Tretyakova
Masonic Cancer Center
Marnett, and Natalia Tretyakova. 2012. Translesion synthesis across 1,N
6
-(2hydroxy-3- hydroxymethylpropan-1,3-diyl)-2-gamma-deoxyadenosine (1,N
6
-γ-
HMHP-dA) adducts by human and archebacterial DNA polymerases. The Journal of
Biological Chemistry 287, (46) (NOV 09), 10.1074/jbc.M112.396788.
Sangaraju, Dewakar, Melissa Goggin, Vernon Walker, James Swenberg, and Natalia
Tretyakova. 2012. NanoHPLC-nanoESI + -MS/MS quantitation of bis -N7-guanine
DNA-DNA cross-links in tissues of B6C3F1 mice exposed to subppm levels of 1,3butadiene. Analytical Chemistry 84, (3) (FEB 07), 10.1021/ac203079c.
Tretyakova, Natalia, Melissa Goggin, Dewakar Sangaraju, and Gregory Janis. 2012.
Quantitation of DNA adducts by stable isotope dilution mass spectrometry. Chemical
Research in Toxicology 25, (10) (OCT 15), 10.1021/tx3002548.
Guza, Rebecca, Delshanee Kotandeniya, Kristopher Murphy, Thakshila Dissanayake,
Chen Lin, George Madalin Giambasu, Rahul R. Lad, et al. [Natalia Tretyakova] 2011.
Influence of C-5 substituted cytosine and related nucleoside analogs on the formation of benzo[a]pyrene diol epoxide-dG adducts at CG base pairs of DNA. Nucleic Acids
Research 39 (9) (MAY): 3988-4006.
Seneviratne, Uthpala, Sergey Antsypovich, Melissa Goggin, Danae Quirk Dorr, Rebecca
Guza, Adam Moser, Carrie Thompson, Darrin M. York, and Natalia Tretyakova.
2010. Exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: Synthesis, structural elucidation, and mechanistic studies. Chemical Research in Toxicology 23
(1) (JAN): 118-33.
Guza, Rebecca, Delshanee Kotandeniya, B. Matter, P. Simpson, Thakshila Dissanayake,
C. Lin, Rahul R. Lad, et al. [Darrin York; Natalia Tretyakova] 2010. Formation of benzo[a]pyrene diol epoxide- adducts at CG base pairs: Effects of C-5 cytosine substituents and related structural analogs; PREPRINT.