Izabella Plotnick Katherine Sampuda BIO 3251-001 September 26, 2014 Determining Inheritance Patterns through Mating Drosophila melanogaster Abstract: Patterns of inheritance are instrumental to understanding the world of genetics; there are many routes to take when analyzing inheritance patterns and many species that can be used to develop this understanding. One such species is the Drosophila Melanogaster, or the fruit fly. A question then arises: what inheritance patterns are to be looked for, and how will they be looked for? Focusing on two specific traits, eye color and wing type, an experiment was conducted to determine what inheritance patterns are prevalent to address this question. With the understanding that the white eye color is a mutant trait, and that apterous wings are also a mutant trait, a hypothesis was formed, which states that both of these mutant traits are recessive, and more importantly, the white eye mutant trait is x-linked recessive while the apterous wing mutant trait is autosomal recessive. After mating a parent generation of a wild-type female, (redeyed/normal winged), and a white-eyed, apterous-winged male, and interpreting the data resulting from that cross, the hypothesis stands true. However, when pushing forward with the experiment and conducting two different crosses, one normal female with one mutant male and vice-versa, and interpreting the data resulting from those two crosses, the hypothesis was not supported. These two conflicting results led the experiment to an inconclusive outcome. It was at this point that basic science principle had to be introduced, as it is a known fact that both the white eye mutant trait is x-linked recessive and the apterous wing mutant trait is autosomal recessive. With that in mind, the only explanation for this phenomenon led to human error. Introduction: The species Drosophila Melanogaster is the scientific name for a fruit fly. Drosophila Melanogaster, through the decades, has been very important for scientific research, in specifically genetic experimentation and interpretation when in relation to advancing knowledge of the characteristics of genetic inheritance (L. Charles et. al. 2012). The reason for why Drosophila melanogaster has been so popular in genetic research is because it is possible to study giant populations at a time, as a single mating produces hundreds of offspring at a time, it takes relatively short time for an egg to develop into an adult, only has four pairs of chromosomes which are easily observed with a microscope, and is relatively inexpensive to maintain (Beam and Kalumuck). It is the model organism for this experiment in genetics. Typically, populations of these fruit flies are found among humans in almost all tropical and temperate locations. Through genetic analysis, Sub-Saharan Africa has been determined to be the center of diversity for these fruit flies, likely alluding to the location of Drosophila melanogaster origin (L. Charles et. al. 2012). Drosophila melanogaster are also very important in the study of genetics because they were the first species to show that chromosomes were associated with genetic information; this was first discovered by Thomas Hunt Morgan in 1910 (R. Piergentili 2010). Drosophila melanogaster were found, and still are to this day, useful to trace inheritance patterns. That is why an experiment has been conducted using Drosophila melanogaster, and the experiment centered around the mutant traits of white eyes and apterous wings, and the question at hand was whether each of these traits are either dominant or recessive, and whether the genes for the mutant traits are located on an autosomal (non sex chromosome) or X-linked chromosome (sex chromosome). An individual with an autosomal-recessive mutant trait is one that requires two mutant alleles, one from each parent, and has nothing to do with gender (H. Chial 2008). An individual with an autosomal-dominant mutant trait is one that requires only one single mutant copy of the mutation-associated gene, and still has nothing to do with gender (H. Chial 2008). X-linked traits are slightly more complicated. A female with an X-linked recessive mutant trait must have received a copy of the mutant gene from her father, who also exhibits the trait, and a copy of the mutant gene from her mother, who is either affected or a carrier (H. Chial 2008). A male with an X-linked recessive mutant trait only receives the mutant copy of the gene from his mother since males only carry one copy of the X chromosome. On the other hand, a female with an X-linked dominant mutant trait can either receive a copy of the mutant gene from her father or mother, whereas a male always receives a copy of the mutant gene from his affected mother (H. Chial 2008). That being said, even though red-eyes in fruit flies are an X-linked dominant trait, the overall mode of inheritance is X-linked recessive. The same goes for wing shape; even though normal wings are an autosomal dominant trait, the overall mode of inheritance is recessive. Drosophila melanogaster has been crucial in the development of this information throughout history. When Thomas Morgan discovered, through the use of fruit flies, that genetic information was related to chromosomes, he was able to connect a direct genetic relationship between the X- chromosome and the resulting phenotypic trait, eye color in fruit flies (R. Piergentili 2010). Since that discovery, the fruit fly’s eye color has been the premier example of a sex-linked trait (P. Guilfoile). The purpose of this experiment is to see first-hand how this conclusion was ascertained, if eye color is recessive or dominant and to answer questions about the inheritance pattern in relation to mutations in the wings and eye color. The experimenters expect to find that mutant eye color trait is truly x-linked, and also hypothesize to find the mutant eye color trait is recessive since white-eyed flies aren’t as commonly seen. At the same time, the experimenters expect to find that the apterous wing mutant trait is to be an autosomal recessive trait because most flies appear to have normal wings. Materials and Methods: Throughout the entire experiment, the flies were kept in an incubator at 24 degrees Celsius, except when being handled by the experimenters. To perform the research necessary for this experiment, 2 vials of flies were obtained. Inside these two vials was a yeast food medium for the flies to feed on for nourishment. The first vial contained wild-type female and male flies, and the second vial contained male and female mutant flies. After given the vials, the flies had to be anesthetized by using FlyNap solution. To put the flies to sleep, a tiny brush was dipped into the FlyNap solution. After removing the foam caps on top of the vials, the brush was slowly slipped inside until the flies were noticeably not moving anymore. Once the flies were asleep, the vials had to be kept on their sides due to premature accidental death that would be caused by the flies sliding down to the yeast food medium, only if the vials were to be stood upright. After the flies were noticeably sleeping, the brush was removed from each of the vials, with the flies being gently removed, and transferred onto a notecard. Once on the notecard, the flies were placed directly under a dissecting scope, and then sorted into one of four groups: male/wild-type, female/wild-type, male/mutant, female/mutant. Then 5-10 individuals of each of the male phenotype were separated. Then different vials of virgin females were obtained in order to mate with the two different male phenotypes (male wild-type and male mutant). The males from the wild-type vial were placed in one of the vials containing virgin females, and the males from the mutant vial were placed in the other vial containing virgin females. After these flies mated, the adult flies were removed from each vial to prevent the offspring that emerged from mating with the parents. Once this was done, the F1 generation of flies were obtained from each of the vials and then examined after anesthetizing them with FlyNap solution again, as done previously. Once the flies were no longer moving in each vial, they were then transferred onto a notecard and viewed under a dissecting scope. Using a paintbrush, each fly was gently pushed into one of four groups; male/wild-type, female/wild-type, male/mutant, female/mutant. After the sorting process, a new empty fly house was obtained to which the selected males and females were added. This set up the F2 cross and in two weeks the data was collected for the new offspring. Results: Figure 1: http://www.drosophilab.com/genetics.html Figure 1 above, shows the differences between male and female Drosophila melanogaster. Female flies have many thin black stripes across their bodies, while male flies have a few black stripes across their bodies, with one stripe being thick in bandwidth. Figure 2: http://www.cs.scranton.edu/~kapplerk2/drosophila.php Figure 2 above, shows the life cycle of Drosophila melanogaster. There are four stages in their life cycle. The first step is when the “fly” is just an egg. The second step is when the egg hatches Larvae. The third step is when the larvae grow and become Pupae. The fourth and final step of their life cycle concludes the pupae. Once the pupae have grown the adult flies emerge. 1. Po: Wild-type females crossed with white-eyed apterous males F1: Resulting Male population phenotypes Males (P) Wild-Type Females x w/ap Males Column1 Group 1 Group 2 Group 3 Group 4 Group 5 Total White eyes/Apterous wings 0 White eyes/Normal wings 0 Red eyes/Apterous wings 0 Red eyes/Normal wings 19 20 38 33 22 132 Males The chart above show a cross between a White eyed apterous male (xaYa) and a wild type female (XAXA), and the resulting F1 generation phenotypes for solely males. The data indicates that all of the males received red eyes and normal wings, and this is because they inherited both of the dominant copies for these traits from their mother. 2. Po: Wild-type females crossed with white-eyed apterous males F1: Resulting Female population phenotypes Females Wild-Type (P) Females x w/ap Males Column1 Group Group Group Group Group Total 1 2 3 4 5 White eyes/Apterous wings 0 White eyes/Normal wings 0 Red eyes/Apterous wings 0 Red eyes/Normal wings 28 40 33 28 23 152 Females The chart above show a cross between a White eyed apterous male (xaYa) and a wild type female (XAXA), and the resulting F1 generation phenotypes for solely females. The data indicates that all of the females received red eyes and normal wings, and this is because they inherited both of the dominant copies for these traits from their mother. 3. F1: White-eyed apterous male crossed with a wild type female F2: Resulting Eye Colors White eyed apterous male x normal female obs exp obs-exp (obs-exp)2 /exp red eyed females 78 64 14 196 3 red eyed males 74 64 10 100 1.5 white eyed females 50 64 -14 196 3 white eyed males 54 64 -10 100 1.5 total population: 256 x2= 9.0 degrees of freedom= 3 reject null hypothesis The chart above show a cross between a White eyed apterous male (xY) and a wild type female (Xx), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on a 1:1:1:1 ratio created when crossing xY and Xx in a Punnett square, which was then scaled to the total population of 256. The chi-squared test comes to be 9.0, resulting in a rejected null hypothesis, with the null hypothesis being that the white eye mutant trait is an x-linked recessive trait. 4. F1: Wild type male crossed with a white eyed apterous female F2: Resulting Eye Colors Wild type male x mutant female obs exp obsexp (obsexp)2 /exp red eyed females 385 186.25 198.75 39051.56 212 red eyed males 308 186.25 121.75 185.25 135.25 14823.06 79 34317.56 184 18292.56 98 white eyed females white eyed males total population: 745 degrees of freedom = 3 1 186.25 51 186.25 x2= 573 reject null hypothesis The chart above show a cross between a wild type male (XY) and a white eyed apterous female (xx), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on the understanding that all females should receive red eyes, since they inherit the dominant copy from their father, and all males should receive white eyes, since they only receive one recessive copy of the trait from their mother. This understanding comes from crossing xx and XY in a Punnett square, using a 1:1:1:1 ratio, which was then scaled to the total population of 745. The chi-squared test comes to be 573, resulting in a rejected null hypothesis, with the null hypothesis being that the white eye mutant trait is an x-linked recessive trait. 5. F1: Wild type male crossed with a white eyed apterous female F2: Resulting Eye Colors Wild type male x mutant female red eyes white eyes total population: 745 degrees of freedom= 1 obs exp obsexp (obs-exp)2 /exp 693 558.75 134.25 18023.96 32.2 52 186.25 -134.25 18023.96 96.7 x2= 128.9 reject null hypothesis The chart above show a cross between a wild type male (XY) and a white eyed apterous female (xx), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on the understanding that all females should receive red eyes, since they inherit the dominant copy from their father, and all males should receive white eyes, since they only receive one recessive copy of the trait from their mother. This understanding comes from crossing xx and XY in a Punnett square, using a 3:1 ratio, which was then scaled to the total population of 745. The chi-squared test comes to be 128.9, resulting in a rejected null hypothesis, with the null hypothesis being that the white eye mutant trait is an x-linked recessive trait. 6. F1: White-eyed apterous male crossed with a wild type female F2: Resulting Eye Colors White eyed apterous male x normal female red eyes white eyes total population: 256 degrees of freedom= 1 obs(obsobs exp exp exp)2 /exp 152 192 -40 1600 8.3 104 64 40 1600 25 2 x = 33.3 reject null hypothesis The chart above show a cross between a White eyed apterous male (xY) and a wild type female (Xx), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on a 3:1 ratio created when crossing xY and Xx in a Punnett square, which was then scaled to the total population of 256. The chi-squared test comes to be 33.3, resulting in a rejected null hypothesis, with the null hypothesis being that the white eye mutant trait is an x-linked recessive trait. 7. F1: White eyed apterous male crossed with wild type female F2: Resulting Wing Type White eyed apterous male x normal female normal wings apterous wings total population: 256 degrees of freedom= 1 obs obsexp exp (obsexp)2 /exp 238 192 46 2116 11 18 64 -46 2116 33 x2= 44.0 reject null hypothesis The chart above show a cross between a wild type female (Ww) and a white eyed apterous male (ww), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on a 3:1 ratio created when crossing ww and Ww in a Punnett square, which was then scaled to the total population of 256. The chi-squared test comes to be 44.0, resulting in a rejected null hypothesis, with the null hypothesis being that the apterous wing mutant trait is an autosomal recessive trait. 8. F1: Wild type male crossed with a white eyed apterous female F2: Resulting Wing Type Wild type male x mutant female normal wings apterous wings total population: 745 degrees of freedom= 1 obs exp 714 558.75 31 186.25 obsexp (obsexp)2 155.25 155.25 24102.56 43.1 24102.56 129.4 /exp x2= 172.5 reject null hypothesis The chart above show a cross between a wild type male (Ww) and a white eyed apterous female (ww), and the resulting F2 generation phenotypes. This information can be seen in the observed column for each phenotype. In order to perform a chi-squared analysis, the expected values were calculated based on a 3:1 ratio created when crossing ww and Ww in a Punnett square, which was then scaled to the total population of 745. The chi-squared test comes to be 172.5, resulting in a rejected null hypothesis, with the null hypothesis being that the apterous wing mutant trait is an autosomal recessive trait. Discussion: The data gathered does not support the hypothesis. When crossing the Po generation, the resulting F1 phenotypes does coincide with what is to be expected based on the hypothesis; however, when moving forward with the experiment and crossing a F1 generation to create a F2 generation, the data collected does not support the hypothesis. With the knowledge that the Po generation is homozygous for both the wild-type mother and mutant father, and with the hypothesis being that white eye color is a recessive x-linked trait and apterous wings are a recessive autosomal trait, the F1 phenotypes are expected to be all red-eyed and normal-winged, for both males and females. In this instance, the data certainly verifies the hypothesis. The experiment then moves forward as the normal females and the normal males from the F1 generation, which are now heterozygotes, are mixed with their mutant counterparts. This is when the data gathered by the experiment does not necessarily coincide with what was to be expected based on the original hypothesis. When mixing a normal heterozygous female with a mutant homozygous male, according to the hypothesis that the white eye color is x-linked recessive and the apterous wing is autosomal recessive, the resulting F2 generation should be comprised of three fourths normal, and one fourths mutant. This did not happen, and the chi square test points to rejecting the hypothesis for that reason. The same scenario appears when crossing a normal heterozygous male with a mutant homozygous female. The resulting F2 generation should be comprised of three fourths red-eyed and one fourths white-eyed, and three fourth normal wings and one fourth apterous winged. Again, this did not happen, and the chi square test exhibits that through rejecting the original hypothesis. This experiment then would lead to inconclusive results, as the Po cross to F1 generation resulted in data supporting the hypothesis, while the F1 cross to F2 generation resulted in data that did not support the hypothesis. While the results prove to be inconclusive, scientific precedence says otherwise. It is an understood fact that eye color is an x-linked, and that the mutant white eye color is recessive; it is also an understood fact that wing type is an autosomal trait, and that the mutant apterous wing type is recessive (R. Piergentili 2010). This being said, for the experiment to result in the way it did, there is room for only two explanations, human error and limitations on the chi-square data due to too small of numbers. The experimenters must have incorrectly accounted for the number of each phenotype in the F2 generation; this can be attributed to a number of factors such as lack of time, large amounts of flies to work with, etc. The phenotypes in the F2 generation should have been distributed the way they were expected to solely based on a scientific consensus that’s been understood for many years; the only logical reason that they weren’t has to be because of human error. While the experiment yielded inconclusive results, based on scientific principle, the original hypothesis, which states that the mutant white eye color is x-linked recessive and the mutant apterous wing type is autosomal recessive, with each of these trait’s mode of inheritance being recessive, has to be correct even though the experiment is not indicative of that. Literature Cited Chial, Heidi. "Mendelian Genetics: Patterns of Inheritance and Single-Gene Disorders." Nature.com. Nature Publishing Group, n.d. Web. 08 Oct. 2014. Guilfoile, Patrick. "Wrinkled Peas & White-Eyed Fruit Flies The Molecular Basis of Two Classical Genetic Traits." National Association of Biology Teachers (1997): 92-95. Web. 01 Oct. 2014. Kalumuck, Karen E., and Carolyn K. Beam. "Drosophila Melanogaster." (n.d.): n. pag. Http://eds.a.ebscohost.com/eds/detail/detail?sid=faf569c1-cd63-4c85-a1afb71ae1238076%40sessionmgr4004&vid=3&hid=4102&bdata=JnNpdGU9ZWRzLWxpd mUmc2NvcGU9c2l0ZQ%3d%3d#db=ers&AN=94416457. Web. 1st Oct. 2014. Langley, Charles H., Sasha A. Langley, and David J. Begun. et al. Genomic Variation in Natural Populations of Drosophila Melanogaster (2012): 533-98. Http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454882/. Web. 01 Oct. 2014. <http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454882/>. Piergentili, Roberto. "Multiple Roles of the Y Chromosome in the Biology of Drosophila Melanogaster." The Scientific World Journal (n.d.): 1749. Web. 01 Oct. 2014.