Billiar Lab News University of Pittsburgh Summer 2013 Volume 19, Edition 1 Important Dates Lab Updates Publication! “Induction and stability of human Th17 cells require endogenous NOS2 and cGMP-dependent NO signaling”, a recent publication in The Journal of Experimental Medicine was contributed to by Drs. Billiar and Scott. Changes to Billiar Lab Meeting Schedule Dr. Billiar’s weekly 12:15 Thursday Lab Conference will be held on Wednesdays from 12:00 to 1:00pm effective September 2013. The schedule change is necessary as Dr. Billiar would like his lab members to attend the Department of Immunology Seminar Series that is scheduled to begin September 2013. The Immunology Seminars will be held on Thursdays at 12:00. schedules, as they are updated, can be found on the Simmons Research General Surgery and Vascular Tu 8:00am & Th 8:30am F- Labs website events calendar. 1275 PUH Aug 29 Lab Stock PBS At a recent research meeting with Dr. Billiar, he questioned the use of lab prepared PBS for use in in-vitro and in vivo procedures. This PBS should never be used for in vivo work. For in vivo injections, sterile PBS from Presby Pharmacy is purchased in 50ml bags. See Deb for further information concerning in vivo injection. Eileen Bauer Billiar Lab Meeting Th 12:15pm F-1275 PUH Aug 15 Jinze Wu Aug 22 Hong Liu (Journal Club) Aug 29 GuoLiang Wang DAMP’s/Danger Signals Th 10:00am F-1275 PUH September 26 October 17 (Tentative) November 21 December 19 Some fun facts: The cost of the vendor 500ml PBS bottle is ~$4.90 The lab currently prepares 10L of PBS weekly, much of this is wasted. The vendor PBS will only stay sterile and clean if you keep it that way. Trauma/Sepsis Model Tu 9:30am F-1275 PUH September 17 October 29 November 12 December 10 MUH Staff Meeting Please mark your calendars Mon 1:00-2:00pm and as soon as the Immunology schedule is posted Deb will forward to you. In addition, both August 12 NW628 MUH October 15 N727 MUH December 9 N727 MUH New Faces Please welcome the following new people into our labs: Billar Lab Tong Jiang - Volunteer Shuhua Chen – Post Doc Assc Zhengzheng Yan – Visiting Scholar Othman Malak – Post Doc Assc Mostafa Ramadan – Resident To avoid waste, the lab will stock 50ml tubes of vendor PBS as well as 500ml bottles. This will not involve an autoclave step. Vendor purchased water will also be stocked soon. We have initiated a Glassware room QC and all 3 equipment pieces (dryer, washer and autoclave) were negative for any bacterial growth. Next, an LAL test will be performed in the next week on the equipment. to scrape and rinse the cages so there is no bedding residue remaining. The filter tops will also be sent for washing, so please leave them with the dirty cages. We are also providing bins to collect the water bottles and rubber stoppers in each animal use room. Please do not transport these cages to locations other than NW615MUH and Hui Zhou – Visiting Scholar If you prefer to continue to NW636MUH. And do not Ye Zhang – Visiting Scholar use the lab prepared PBS you bring cages from other will need to order and locations here. prepare yourself. Please see Hepatocyte Harvest We are extending harvest days to include Wednesdays for those obtaining cells from the Montefiore harvests. If you wish to receive cells on Wednesday, note that on the harvest request board. This option is available to permit twice as many experiments to be performed since many people work weekends. Hua Zhong – Visiting Scholar Zuckerbraun Lab Yanting Wang – Med Student Hong Liao for the details and procedure. Silvia Laverde – Visiting Scholar Jason Luciano – Resident Geller and Tsung Labs We are also converting to purchasing pre-sterilized pipet tips. Please use only the Samer Tohme – Resident barrier tips while performing Patrick Varley – Resident work in the cell culture hoods Tony Spadaro – Med Student Ryan Rothman - Undergrad Tzeng and Sachdev Labs Maylene Xie – Med Student Ellen Cody – Med Student Andrew Leake – Resident Jun Xu – Resident Other Labs Zhigang Li – Visiting Scholar (Fan Lab) Huang Zhi-jun – Visiting Scholar (Chen Lab) from this point forward. If you have any suggestions and/or concerns, please do not hesitate to voice them. Animal Cage Cleaning Changes In an effort to eliminate animal caging in our washroom, we are transporting the dirty cages to DLAR for them to wash. In order to reduce the amount of time we are being charge by DLAR, we need you (the user) MUH Film Processor The film processor is no longer usable due to a corroded pipe that cannot be fixed. Currently the only option for obtaining a picture of your western is the Bio-Rad Imaging System in NW607. Please see Rick Shapiro for training before you use it. Deb is exploring other options for you only. If Fan: 912 for film processor use in the your itemized receipt Geller: 921, 1501A, 1501B BST. includes others (spouse or Chairman Research Division Travel Policy – Update Receipts will be required for ALL travel reimbursements including; air, registration, abstract fees, poster fees, taxi fare, meals, etc. There are certain travel restrictions that apply and can only be determined by your receipts. We, as well as payment processing, require individual itemized receipts other attendees), please cross out all charges that do not apply to you. Animal Housing Room Changes – Effective Aug 12, 2013 Due to the BST facility renovation project the current list of housing rooms by PI is: Billiar: 935, 935, 907, 911, 1501B Bauer: 912, 940 Pitt: 907, 1501B Rosengart: 935 Sachdev: 914, 1501B Scott: 907, 911 Tsung: 935, 907, 923, 921, 940 Cube 4, 1501B Tzeng: 911, 940 Cube 4, 1501B Vodovotz: 921 Wang: 908, 1501B Zuckerbraun: 921, 1501B The entrance flow for the rooms has stayed the same: Chen: 909 Staff Highlight – Sladjana Stratimirovic I was born and raised in Belgrade, Serbia, located at the crossroads of Central and Southeast Europe. I earned my B.Sc. in science, specializing in Crop Science, at University of Belgrade. I also earned a diploma as a registered nurse (paediatric course). I could never decide whether I liked science or medical field better. After spending two years in the lab at Plant Pathology Division, University of Belgrade I decided to go back to medical field. I started working as a nurse in a private gastroenterology office. After a year, while still working, I went back to school to become physical therapist. All my plans changed after I won green card by lottery and came to USA with my husband in 2000 .We came to Pittsburgh because we had some friends here and it became our home. Shortly after arriving in Pittsburgh, I found a position at Carnegie Mellon University, Department of Biological Sciences, in Javier Lopez’s lab. He was studying regulation of alternative pre-mRNA splicing. After 6 years in his lab I started working with Dr. McCloskey in the Billar lab. Dr. McCloskey’s research was focused on cell signaling, in particular the role of TLR4 and free fatty acids in obesity, as well as the effect of obesity on inflammation and end organ dysfunction following severe trauma/haemorrhagic shock. Staff Highlight – Sladjana Stratimirovic(Con’t) Since 2011 I have been working in Dr. Brian Zuckerbraun’s group as a technician. I have been working with other people in the group on different in vitro experiments in order to study protective responses to haemorrhage or sepsis that limit cell death and tissue/organ injury. Heme oxygenase, CO and NO signalling are important part of study in our group. I train new members of the group to do protein and RNA extractions, western blotting, qPCR etc. I live in Forest Hills with my husband Vladimir and two sons, Luka (11) and Stefan (10).We have two pets—lion head bunny and leopard fat tail gecko. Like most parents, I enjoy supporting my kids in doing things they like, from different sports to music. All those practices, games, tournaments, meets ,classes are time consuming, and I hardly get any free time for myself and always struggle to finish the housework, but it is worth it. The only time that I have for myself is when I go to aerobic kickboxing. It has been a part of my regular weekly schedule for the past five years. It helps me gain energy and reduce stress. I also have been working as a Serbo-Croation translator or interpreter for the Baldwin-Whitehall School District since 2007. Additionally, my whole family likes to travel, and we spend most of our vacation time in Belgrade. The kids love spending time with our families, friends and visiting different places in Europe. My son, Stefan, learning to pipet on bring your child to work day. 1 - 935- Immunocompromised AND Helicobacter Free 2 - 931/934/907 - Helicobacter Free 3 - 904/922 – Immunocompromised 4 - 924, 925, 920, 921, 923, 914, 913, 912, 911, 910, 909, 908, 985E, 906, 903, 902 - SPF This list is organized by tier. Mice The list of rooms on each tier 5 - 905, 915 - SPF Rat Housing 6 - 940 - BSL2 Housing 7 - 1501A (Rats) 8 - 1501B (BSL2 Rat/Mouse) (1-8) can be entered in any order, but once you go into a lower tier, you cannot enter a higher tier room without showering, with the exception of SPF rats to SPF mice, which requires a full garb change. Faculty Highlight –Wentao Gao After high school, I spent five years at medical school, where I trained as a dentist. I then studied three more years for a master degree in pathology, training as a clinical pathologist specialized in Oral and Maxillary diseases. I spent another three years in the same field to obtain Ph.D. degree. During these learning and training processes, I learned plenty of knowledge in basic and clinical sciences and mastered multiple technologies for biomedical research. These include technologies in histology, pathology, immunology, cell biology and molecular biology. With these tools, I productively conducted research projects when I joined the University Of Pittsburgh School Of Medicine. During that time, I further developed skills and insights into scientific investigations and become a more independent scientist in term of recognizing and identifying scientific problems and utilizing tools to answer these questions. I joined the Billiar lab in 2010 and have been working with Dr. Michael T. Stang since. My research of interest has been focusing on understanding the mechanism of autophagy and its potential applications in disease models such as cancer therapy models. Several research projects have been accomplished or are ongoing in this lab. In addition, I also help other lab members to achieve their research goals. Ambition and motivation in biomedical sciences have been driving me to face new challenges in research, but I find that I enjoy my work because it directs me to an unknown and unexplored world. I have been married for twenty years. Fortunately, my wife resides with me here in Pittsburgh. We have one daughter (14 years old) and one son (8 years old). My daughter plays the piano and has won first place three out of four times when entered in the Gift Center of Pittsburgh public schools science competitions. My son likes sports games. My wife works as a senior technician in Pitt. Without my family support, I would not have the impetus to persistently work hard to achieve my research goals. I like watching TV shows, particularly interested in history, nature and science documentaries. I like all sports games, but my favorite hobby is fishing. Messages from IACUC & DLAR BST Facility Renovations The 9th floor BST will undergo renovations to increase animal housing capacity. Three housing rooms (930, 932, and 933) will be converted into two larger rooms (930 and 933), and will contain high density caging racks. efforts to minimize colony size during this project so that everyone’s needs can be accommodated. An email communication containing updated allocations has been sent to each PI and individual labs will be contacted to arrange colony transfers between Good Luck We’d like to extend our best wishes and good luck in future endeavors to those who have left the lab in recent months and those who will be leaving in the upcoming months: The tentative start date for housing rooms. DLAR will this project is August 15th, move the animals, unless 2013, and the projected end otherwise requested by the date is mid to late October PI. When the final 2013. Noise and vibrations construction schedule is will be kept to a minimum, complete, the DLAR will Gina Howell and should be comparable to communicate timelines to Misaki Kiguchi the recent project which each PI, via email. In the Justin Wallace added emergency power interim, we are available to outlets to the animal housing discuss any concerns that you rooms. The project will may have regarding this require that some animals be project. Please contact the relocated within the facility, facility supervisor, Matt during construction. Mihalik, to schedule a Due to the need to vacate the three affected rooms, the Space Allocation Committee will be reassigning box allocations based on each PI’s actual box count during the months of February through June, 2013. The Space Committee will be able to consider requests for additional space at the completion of the construction project, in late October 2013. We appreciate meeting. IACUC Assitance Program The IACUC Office has launched a new outreach project to assist researchers in maintaining compliance with University policies and Federal regulations. This program is pro-active, with an emphasis on laboratory management and IACUC protocol completion. During the rollout this summer, we will concentrate on the issue Changchun Cai Sean Whelan Cuiling Zhang Zheng Liu Cordelia Ziraldo John Pribis Kevin Hart Richard Collage Tao Ma Kathyrn Vreeland of expired drugs and other agents, but will also use the opportunity to offer expertise and assistance to researchers and their staff members regarding all areas of investigator-IACUC interaction. Over the next few months, investigators may receive a visit from Jody Mankamyer or Brooke Paul from the IACUC office. This is not a visit to audit the lab, or check one of the top ten citations seminars are held each for compliance. It will simply given by the USDA each Thursday at 2:00 pm in 206 be done as a friendly year. Expired drugs not only Heiber. Space is limited - if reminder to the PI and/or lab may lack needed sterility, interested, please contact manager to check their drug potency and efficacy, but also Michael Kessler box and discard expired may contain precipitates that (kesslermc@upmc.edu) to drugs or materials on a have negative effects on the make arrangements. regular basis. PIs may also animal or the experimental request an assistance visit results. Keep in mind that from the IACUC office for the materials such as sutures, purpose of facilitating physiological saline and compliance with betadine also have expiration University (http://www.rcco.pi dates that must be adhered to tt.edu/ControlledDrugs/) and in order to maintain IACUC policies regarding the compliance. use of controlled and non- Please remember that the IACUC Office is committed to helping investigators remain compliant with University and Federal policies, regulations, and laws pertinent to the use of animals in teaching or We would also like to remind research. Please contact the researchers that assistance is IACUC office if you have any available for the use of ARO questions. We can be reached Expired drugs are frequently (Animal Research Online), the at 412-383-2008 found during the IACUC IACUC's online protocol or iacuc@pitt.edu. semi-annual inspections, and submission and management the use of expired drugs is system. Introductory controlled drugs and materials. Colony Status: As of July 19, 2013 Established Colonies iNos KO TrifLPS-2 Colony increased CD14 KO Myd88 KO* (backcrossing) Myd88 WT* (backcrossing) TLR9CpG1/CpG1 Jα281-/HC TLR4 KO TLR4 flox TLR4 KO (global) Het TLR4KO/TLR4flox RAGE KO C3 KO Colonies in Development ATF3 KO ROSA TLR2 KO Pf4creHMGB1flox Caspase1KO* TLR4 KO x TLR2 KO DC TLR4 KO AIM2 KO (eliminated colony TLR4 KO/TL9 – commercially available Nalp 3 KO* from Jax) TLR4 KO/RAGE KO Myd88 flox – small amounts Lyz Cre TLR4 KO available HC Myd88 KO – Adipose TLR4KO wait list started, small HMGB1 flox amounts available HC HMGB1 KO Lyz cre Myd88 KO– wait list NFKB luc started, small amounts NFKB WT available CpG1/CpG1 Pf4creTLR4 KO Caspase 11 N-6 set-up, Cathespin L KO N-6 expected waiting for pups May 2014 Strains Available from Collaborators CAV KO (Michael Bauer) TSP-1 KO (A. Chen) IFNabR KO (M. Bauer) TSP-2 KO (A. Chen) IRF-2 KO (David Geller) CD36 KO (A. Chen) eNos GCHtg (A. Chen) hph-1 (A. Chen) Cryopreserved Strains *at Jackons Labs unless otherwise noted eNos tg EGR1 KO CD36 KO IFNabR KO TLR2 KO TLR-9 (eggs, in house) AIM2 KO TLR-4 flox (under Hackam) Stud Colonies TLR4 KO x CD11c TLR4 KO x Albumin Cre HMGB1 flox x Albumin Cre TLR4 x Fab cre TLR4 KO x Lyz Cre HMGB1 flox x Pf4 cre GDF-15 KO (Yoram Vodovotz) TLR-4 KO (Taconic, under Hackam) HMGB1+/- TLR-4 KO x Pf4 cre Myd88 flox x Lyz cre Myd88 flox x Alb Cre If you have any questions regarding the contents of this newsletter, contact Deb Williams (williamsd8@upmc.edu) If you know of anything exciting or newsworthy going on in the lab that you want to share with others email Alicia Frank (franka@upmc.edu) with the information For more information, please visit the General and Vascular Surgery Labs website (http://www.gensurgerylabs.pitt.edu/)