DRAFT May 13, 2013 1 WHAT ARE THESE STANDARDS? The following document is a draft of “common core” technical skill standards that are specific for biotechnology. Common core refers to skills and knowledge that apply broadly to most biotechnology workplaces. Specialized skills, such as operating a flow cytometer or performing the polymerase chain reaction, while critically important in some settings, are not considered to be core and are not included. This document draws on the Washington State Skill Standards1 and the Department of Labor Skills Standards2, both projects that brought in large teams of biotechnology practitioners. These standards are intended to describe the ability to perform tasks and the underlying knowledge required of entry level biotechnology technicians in: Basic Bioscience Research/Academic Laboratories Testing Laboratories Relating to Biotechnology (e.g., pharmaceutical development laboratories, quality control laboratories) Small Scale Biotechnology Production Facilities (e.g., facilities that produce gram quantities of enzyme using laboratory-scale equipment) Bioprocessing Pilot Plants Large Scale Bioprocessing Facilities (Note: larger scale bioprocessing may have additional requirements that are considered to be “core” relating to engineering and mechanics.) NOTES RELATING TO THE PRESENTATION AND ORGANIZATION OF THIS DOCUMENT 2 It is not reasonable to expect entry level technicians to establish processes and procedures in a workplace, although they may do so later in their careers or in some situations. Therefore, these standards frequently use the phrase “according to established procedures” to indicate that the technician is following processes and procedures that were put in place by the employer. The term “common work tasks” relates to things an entry level technician might do. These are items that might be assessed in a laboratory setting. The term “underlying technical understanding” is used to indicate underlying knowledge required to perform common tasks at an entry level. At a later time, assessments will be developed that more fully articulate the level of understanding required; these assessments can be written “paper and pencil” format. The first topic, “Biotechnology Industry Fundamentals,” is different from the other nine topics in that it is not tied to any “Common Work Tasks,” i.e. things that entry level workers do. Rather this topic summarizes common knowledge related to the biotechnology industry. These standards in this document are organized around 10 core topics: 3 1. Biotechnology Industry Fundamentals 2. Health, Safety, and Security 3. Basic Calculations 4. Routine Facility Support 5. Quality Control and Assurance; Basic Regulatory Affairs 6. Metrology 7. Biological Solutions 8. Basic Separation Methods 9. Assays, Data Collection, Data Evaluation 10. Cell Techniques 1. Biotechnology Industry Fundamentals: Understanding the biotechnology industry and its interactions with society. Underlying Technical Understanding: 1.1 Historical Development of Biotechnology 1.2 Major Application Areas Agriculture, Food Production, Food Processing Agricultural Feedstock and Chemicals Environmental Remediation Biofuels Industrial Enzymes Drugs and Pharmaceuticals Regenerative Medicine Medical Devices (including diagnostics) and Equipment 1.3 Major Technologies Laboratory Technologies Analytical Methods Bioprocessing Purification Methods Molecular Biology Methods Bioinformatics 1.4 Business, Legal Issues Organizational Structures of Biotechnology Companies Life Cycle of Products (e.g., discovery in academic labs, research and development, production) Venture Capital, Angel Capital, Business Plans Intellectual Property Documentation Patents Confidentiality Biomedical Ethics Scientific Accountability Regulatory Agencies and Regulations 1.5 Information Resources Scientific Literature Internet Resources Networking and Social Resources 1.6 Societal and Ethical Issues Biomedical Ethics Animal Research Genetically Modified Foods 4 2. Health, Safety, and Security: Equipment, practices, and procedures that promote a healthy, safe, and secure work environment. Common Work Tasks: Maintain a Sanitary and Clutter-free Work Environment Monitor, Use, Store, and Dispose of Hazardous Materials According to Established Procedures Find and Use Material Safety Data Sheets and Other Information Sources (e.g., find out that a chemical is toxic by inhalation and use a chemical fume hood when working with it) Follow Applicable Health and Safety Regulations and Institutional Procedures Including but Not Limited to Chemical Hygiene Plan Follow Applicable Security Regulations and Institutional Procedures (e.g., keep areas locked according to company procedures, do not remove items from premises that should not be removed) Follow Universal Precautions for Biological Pathogens Apply First Aid if Required Follow Established Emergency Procedures, if Required Select and Use Appropriate Personal Protective Equipment at All Times Participate in Safety and Security Training and Emergency Drills Follow Institutional Policies Relating to Biological Hazards Apply Standard Aseptic Technique when Appropriate Use Disinfection and Sterilization Techniques as Appropriate Work safely with organisms identified as requiring BSL1 or BSL2 practices Work safely with Radioisotopes Commonly Used in Laboratory Settings Identify Unsafe or Unsecure Conditions and Take Corrective Action According to Established Procedures Track Safety Concerns According to Established Procedures Underlying Technical Understanding: 5 The Nature of Electricity, Electrical Hazards, and General Precautions Required to Safely Operate Electrical Devices The Types of Physical Hazards in Laboratories (e.g., glass and compressed gasses) Chemical Hazards (e.g., chemistry sufficient to understand storage methods that prevent chemical interactions) Biological Hazards (e.g. sufficient microbiology to distinguish bacterial, viral, and fungal pathogens and to understand the classification of biological hazards into Biological Safety Levels. Vocabulary such as “containment,” “sterilization,” and “disinfection”) Radiological Hazards (e.g., understanding different types of radioisotopes and their uses; understanding the concept of half-life, understanding how radioisotopes can harm cells) Contamination (e.g., the risks of contamination, cross-contamination, chemical contaminations, contamination by microorganisms) Avoiding Contamination (e.g., aseptic technique, the purpose of disinfectants) Disinfection and Sterilization (e.g., understanding how steam sterilization and chemical disinfectants work and situations in which different methods are used) Purpose and Proper Use of Safety Equipment (the purpose of various types of PPE) Meaning of Safety Symbols and Signs Emergency Procedures (e.g., how to clean a small chemical spills, how to operate a fire extinguisher) Sources of Safety Information (e.g., institutional manuals, MSDSs, internet resources) 3. Basic Calculations: Math skills required to solve basic on-the-job problems Common Work Tasks: Perform Calculations Relating to Measurements Perform Calculations Relating to Reagents, Solutions, and Media Formulations Perform Calculations Relating to Dilution of Liquids Perform Calculations Embedded in Laboratory Procedures (e.g., calculate how to obtain a given DNA concentration for a restriction digest) Perform Calculations Relating to Data Acquisition and Analysis Graph and Display Data Using Excel and Other Computer Tools Graph and Display Data by Hand Graph and Display Linear Relationships Prepare Histograms Perform Calculations Relating to Monitoring Products and Processes and Quality Control Perform Calculations Relating to Growing Cells and Analyzing Their Growth Perform Calculations Relating to Instrument Calibration, Maintenance, and Use Perform Calculations Relating to Performing Assays and Procedures Perform Calculations Relating to Cell Counting, Density, and Cell Splitting Underlying Technical Understanding: 3.1 Basic Math Techniques Exponents and Scientific Notation Logarithms (e.g., converting between pH and hydrogen ion concentration) Percents Manipulating Algebraic Equations (e.g., converting between revolutions per minute and relative centrifugal force in centrifugation, converting between absorbance and transmittance in spectrophotometry) Solving Ratios and Proportions 3.2 Measurements Units of Measurement and Converting between Units Significant Figures and Recording Data with the Correct Number of Significant Figures The Meaning of Accuracy, Precision, Error, Standards 3.3 Concentration Various Methods of Expressing Concentration The Nature of Reagents, Solutions, and Media Formulations What it Means to Dilute of Reagents, Media, and Solutions The Application of Ratios and Proportions to Laboratory Solutions The Use of “Dimensional Analysis” as a tool for Solving Conversion Problems 6 Working with Linear Relationships (e.g., understanding linear relationships, understanding the significance of an R value when provided) Working with Nonlinear Relationships (e.g., radioactive decay and half-life of isotopes) Graphical Methods of Analysis and Data Display (e.g., interpreting histograms and linear plots) Statistical Methods for Describing Data (descriptive statistics only, such as standard deviation and mean) Statistical Methods of Process Control (e.g., interpreting and using statistical control charts) 3.5 Cell Growth Growth Curves (e.g., understanding the nature of population growth, exponential growth, stationary phase) 4. Routine Facility Support: Basic Functions Required to Support Operations Common Work Tasks: Periodically Inventory Supplies According to Established Procedures Anticipate Required Materials and Obtain them According to Established Procedures Discard or Reprocess Expired Materials in Accordance with Established Procedures Discard and Replace Broken Labware Schedule Work Functions in an Organized Manner (e.g., conduct daily checks without fail and document results appropriately, schedule use of shared equipment in advance) Clean/Sterilize Glassware, Equipment, Counters, Facility According to Established Procedures Monitor Facility Environment (e.g., temperature) According to Established Procedures Ensure that Equipment is Cleaned and Maintained According to Established Preventive Maintenance Procedures Participate in the Installation, Modification, and Upgrade of Equipment Enter Information into Databases and Retrieve Information Document Facility Support Functions Using Logbooks, Computer Systems, Forms, and Other Methods, According to Established Procedures Underlying Technical Understanding: Sources of Materials; On-line Ordering Basic Safety as Described Previously Basic Microbiology as Described Previously Methods of Sterilization as Described Previously 5. Quality Control and Assurance; Basic Regulatory Affairs: Practicing quality control and assurance, and operating under governmental regulations. Common Work Tasks: Monitor, Inspect, and Verify Quality of a Product, Procedure, Test Result, or Specimen to Ensure Compliance with Standards and Specifications Participate in Validation or Verification Procedures and Protocols Control and Maintain Proper Documentation Calibrate and Verify or Validate Equipment Systems; Assess Equipment Performance Follow Established Procedures Take and Document Corrective and Preventive Actions According to Standard Operating 7 Procedures or as Directed by Supervisor Know and Comply with Applicable Current Federal, State, Local, and Industry Regulations, as Directed by Employer Participate in Compliance Training Participate in Proficiency Testing Underlying Technical Understanding: 5.1 Documentation Good Documentation Practices (e.g., signatures, dating, use of indelible ink, witnessing requirements) Electronic Practices versus Paper Practices (e.g., nature of electronic signatures, computer security practices) Types of Documents (e.g., controlled vs. uncontrolled; laboratory vs. production) The Roles and Uses of Various Types of Documents (e.g., batch records, SOPs, labeling) 5.2 Quality Control/Quality Assurance Continuous Improvement Concepts The Technician’s Role in Audits Purpose of Validation/Verification Testing Nature of Product Specifications Statistical Methods of Data Analysis as Described Previously 5.3 Regulatory Compliance History of Pharmaceutical Regulations and the FDA Organization of the FDA (e.g., the roles of CDER and CBER) Understanding the Life Cycle of Medical Products (e.g., Discovery through clinical trials, NDAs, INDs) Basic Understanding of Good Laboratory Practices and Good Manufacturing Practices Awareness of Regulatory Agencies at the Local, State and Federal Levels 6. Metrology: Use measurement instrumentation properly with understanding of factors that lead to correct results Common Work Tasks: Calibrate and Maintain Measuring Instruments (e.g., balances, pH meters, thermometers, pipettes, spectrophotometers) Verify Proper Performance of Instruments Use Significant Figures Correctly When Recording Measurement Values Evaluate Accuracy (e.g., by calculating percent error) Evaluate Precision (e.g., by calculating standard deviation) Make Weight Measurements with Acceptable Accuracy and Precision (e.g., use proper balance for each application, verify balance performance before use, monitor temperature effects when weighing) Make Volume Measurements with Acceptable Accuracy and Precision (e.g., use micropipettes properly, ensure that devices are maintained according to established procedures, avoid contamination of samples, select glassware properly) Make pH Measurements with Acceptable Accuracy and Precision (e.g., calibrate instrument properly, verify instrument performance before use, select proper electrodes 8 for a given application, compensate for temperature effects on pH) Make Temperature Measurements with Acceptable Accuracy and Precision (e.g., select proper device for application, verify performance of device before use) Make Spectrophotometric Measurements with Acceptable Accuracy and Precision (e.g., ensure that instrument has been maintained according to established procedures) Underlying Technical Understanding: 6.1 General Principles of Metrology National/International Standards, Calibration, and Traceability Common Terminology (e.g., accuracy, precision, error) General Methods of Calibration and Performance Verification Significant Figures as an Expression of Uncertainty Types and Causes of Measurement Error Uncertainty in Measurement (basics) Preventive Maintenance Programs 6.2 Understand Sources of Error in Specific Measuring Methods Weighing (e.g., understand effect of temperature on weighing accuracy and precision) Measuring Volume (e.g., understand micropipettes, proper operation, preventing damage to them) Measuring Temperature Measuring pH (e.g., know how to detect values that are not accurate or precise, understand trouble-shooting methods, understand that there are different types of electrodes for certain applications) Measuring Light Absorbance (e.g., understand the basic principles of spectrophotometry and how instruments function) 7. Biological Solutions: Be able to prepare, store, and handle reagents, solutions, and media to support biological systems Common Work Tasks: Perform Calculations Necessary to Prepare Reagents to Particular Concentrations Order, Verify, Store, Obtain, and Handle Raw Materials According to Established Procedures Discard Outdated Materials According to Established Procedures Prepare or Obtain Water of Verified Suitability for Application Wash/Prepare or Obtain Glassware, Pipettes, and Other Devices of Suitable Quality for Application According to Established Procedures Verify Suitability of Required Measuring Instruments (e.g., calibrated balance) According to Established Procedures Weigh and Measure Raw Materials and Water (or Other Solvent) with Suitable Accuracy and Precision According to Established Procedures Mix Reagents, Solutions, and Media Properly According to Established Procedures Sterilize Reagents, Solutions, and Media Properly, When Necessary, According to Established Procedures Set Expiration Dates Appropriately, When Necessary, According to Established Procedures Verify that Reagents, Solutions, and Media were Made Correctly According to Established Procedures Label Reagents, Solutions, and Media Properly According to Established Procedures 9 Store Reagents, Solutions, and Media Under Proper Conditions According to Established Procedures Follow Appropriate Documents According to Established Procedures Document Work According to Established Procedures Underlying Technical Understanding: Calculations Relating to Concentration as Previously Described Verification Methods for Measuring Instrument Performance as Previously Described Use of Mixing Devices and Selection of Proper Mixing Device for an Application Methods of Reagent Sterilization and When Each is Used Methods to Verify Successful Sterilization Methods of Assessing the Quality of Solutions, Reagents, and Media (e.g., checks of conductivity or osmolarity, sterility checks) Storage Methods for Solutions and Media Basic Chemistry of Buffers and pH 8. Basic Separation Methods: Be able to use centrifuges, filtration systems, and electrophoresis devices that are appropriate for a given application in a safe and effective manner. Common Work Tasks: Follow established procedures to: Operate and Maintain Centrifuges Safely Select, Purchase, Use Centrifuge Rotors, Bottles, Tubes, and Adaptors that are Appropriate for Specific Applications Select Proper Filtration System for an Application Purchase, Use, and Maintain Filtration Devices and Systems Prepare or Obtain Gels for Electrophoresis (e.g., prepare agarose gels) Set-Up and Conduct Electrophoretic Separations Efficiently and Safely Use Proper Controls and Standards During Electrophoretic Separation (e.g., use of molecular weight markers, known standards) Isolate, Identify, and Prepare Samples for Separations Maintain Documentation Associated with Samples Maintain Documentation Associated with Results Evaluate Results of Separations Recognize, Report, and Trouble-shoot Problems with Separations with Assistance of Supervisor and According to Established Procedures Underlying Technical Understanding: 9.1 General Separation Principles Selecting Proper Separation Method (e.g., knowing that filters are used for sterilizing antibiotics) Separation Strategies (e.g., understanding how more than one method might be used sequentially in a strategy to purify a protein) Sample Preparation Methods (understand importance of preparing samples properly and protecting from damage) 9.1 Centrifugation Understand Centrifuge/Rotor Safety Concerns Understand Maintenance Requirements for Centrifuges and Rotors 10 9.2 Filtration Selection, Purchase, Use of Filtration Devices Appropriate for Specific Applications; Use of Catalogues 9.3 Electrophoresis Ohm’s Law and Principles of Electrophoresis Safety Concerns 9. Assays, Data Collection, Data Evaluation: Perform tests on samples to provide information about those samples; properly document, store, and evaluate results. Common Work Tasks: Follow established procedures to: Set-Up and Conduct Tests/Assays According to Established Procedures: Chemical, Biological, Clinical, Environmental, Robotic, or Mechanical Use Proper Controls and Standards Obtain Samples for Assays Prepare Documentation Associated with Samples Label Samples Properly Prepare Samples for Analysis According to Written Procedures Store Samples Properly According to Established Procedures Use Instruments that Analyze Samples Properly; Verify Proper Maintenance and Performance of Instruments Document Assay Procedures and Results Evaluate Results of Assays (e.g., determine amount of analyte in quantitative assay) Report Results in Written Technical Reports and Orally (e.g., proper report format is used, all resources are properly referenced, graphs and tables are clearly labeled and explained, data is properly analyzed) Recognize, Report, and Trouble-shoot Problems with Assays with Assistance of Supervisor and According to Established Procedures (e.g., follow CAPA policy, if present) Underlying Technical Understanding: 9.1 Lab Skills Importance and Purpose of Positive and Negative Controls for Assays Use of Standards in Assays Importance of Proper Sample Preparation, Storage, and Handling Methods Chain of Custody Requirements for Samples Understand How to Follow Assay Procedures (e.g., those in laboratory manuals, manufacturer’s instructions) Understand Proper Operation, Maintenance, and Performance Verification of Instruments Associated with Assays (e.g., spectrophotometers as previously described) Understand Documentation Associated with Assay Results Understand Methods of Data Analysis for Assay Results Understand Use of Reference Standards, Standard Curves 11 10. Cell Techniques: Be able to visualize cells using basic microscopic techniques, grow cells aseptically, count cells, harvest cells. Common Work Tasks: Follow established procedures to: Order, Verify, Store, Obtain, and Handle Raw Materials According to Procedures Discard Outdated Materials According to Procedures Clean and/or Sterilize Laboratory Equipment and Supplies Monitor Cell Growth and Health Maintain Suitable Environmental Conditions for Cell Growth (e.g., use sterile technique, maintain incubators) Prepare Culture Media According to Established Procedures Feed, Passage/Transfer Cells Perform Calculations Relating to Cell Splitting Evaluate General Health of Cells Based on Morphology and Appearance of Medium Prepare Cultures for Storage (e.g., put on proper media or freeze) Thaw or Begin Fresh Cultures from Stocks Monitor Gauges And Recording Instruments To Ensure That Specified Conditions Are Maintained Maintain the Equipment and Control Systems Used for Cells Use Microscopes to Visualize and Cells Use Hemacytometers to Count Cells Perform Documentation Use Appropriate Safety Precautions (e.g., apply BSL1 or BSL2 techniques) Underlying Technical Understanding: 10.1 Cell Biology Understand Basic Prokaryotic and Eukaryotic Cell Structure and Function (e.g., know structures and functions of organelles, know key differences between prokaryotic and eukaryotic cells.) Understand Uses of Cells in Biotechnology (e.g., uses of cells in cancer research, cells as “factories to produce enzymes and drugs, cells used for regenerative medicine therapies) Understand Terminology (e.g., cell line, tissue culture, cell culture) Understand Contamination as Described Previously Understand Principles of Biological Safety as Previously Described 10.2 Biological Safety as Described Previously PRIMARY REFERENCES 1. 2007 Biotechnology and Biomedical Skill Standards; Copyright 2007, State of Washington through the State Board for Community and Technical Colleges. 2. Bioscience Competency Model; United States Department of Labor. http://www.careeronestop.org/COMPETENCYMODEL/pyramid.aspx?BIOSCI=Y 12