1 2 3 4 5 Supporting Information Model description 6 ~3°), and relative to the observations, the simulated climatological distribution of 7 precipitation over tropical South America is reasonably good in this model version 8 outside the vicinity of the Andes, although details of precipitation feature need to be 9 improved (Figure S1). Annual mean present-day minus pre-land use vegetation We performed simulations with the NCAR CAM3-CLM3.5 at T42 resolution (~3° by 10 differences in leaf area index (LAI) are plotted in Figure 2b. Since the exchange of water 11 (and carbon) between the biosphere and the atmosphere occurs within leaves of plants, 12 LAI is the main variable that controls transpirational flux. The difference map in Fig 2b 13 illustrates a large negative difference of present-day minus pre-land use vegetation LAI 14 over southern tropical South America, which we view here as a proxy for the 15 deforestation/land use change signature (for more information on the pre-land use 16 vegetation mapping, see Lawrence and Chase, 2010). 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 Table S1. Simulated precipitation and temperature differences due to SST, vegetation, and both SST and vegetation over northern (latitude: 5S-5N, longitude 70W-60W) and southern (latitude: 10S-0, longitude 60W-50W) tropical South America (blue and brown boxes in Figure 1, respectively). The effect of SST only is the ensemble mean differences from the control run differences from 1993-2006 to 1979-1992, and the effect of vegetation only is the ensemble mean differences from the present-day vegetation to pre-landuse vegetation cases for the whole period (1979-2006). The combined effect of SST and vegetation is the ensemble mean difference from 1993-2006 with present-day vegetation to 1979-1992 pre-landuse vegetation cases. Observation is GPCP precipitation (43) difference and GHCN temperature (44) difference between the average of 1993-2006 and of 1979-1992. Northern part temperature is not available from GHCN data because of the lack of the observation. Values in parentheses represent standard deviation. Model Observation 34 35 36 SST Vegetation Total P (mm/year) Northern Southern +108 (160) -12 (124) +13 (150) -70 (131) +125 (160) -82 (132) +127 (148) -70 (146) T (C) Southern +0.2 (0.34) +0.5 (0.40) +0.7 (0.35) +0.5 (0.22) 37 38 39 40 41 42 43 44 45 46 47 Table S2. Simulated water budget (mm/year) over northern (latitude: 5S-5N, longitude 70W-60W) and southern (latitude: 10S-0, longitude 60W-50W) tropical South America (blue and brown boxes in Figure 1, respectively). SST only forcing shows the differences in responses due to SST between the average of 1993-2006 and of 1979-1992, and vegetation forcing shows the differences between potential and present-day vegetation. The increase in precipitation in northern SA is the result of increased wind convergence whereas the decrease in southern SA is largely due to the decrease in evapotranspiration associated with lower vegetation coverage. V is horizontal wind vector, q is specific humidity, E is evaporation, and P is precipitation. All divergence terms are vertically integrated. V q V q E P 48 49 Differences due to SST only Northern SA Southern SA -1 8 -6 14 1 13 119 -48 17 -5 127 -13 Differences due to vegetation only Northern SA Southern SA 4 -29 -15 -12 -0.4 -4 19 32 10 -47 17 -70 50 51 52 53 54 55 56 Figure S1. Mean annual precipitation (mm/year) from the GPCP merged data (top) and CAM3 model simulation (bottom). Simulated precipitation is reasonably good outside the vicinity of the Andes. 57 58 59 Figure S2. Mean monthly Bowen ratio for the southern part (brown box in Figure 1). 60 61 62 63 64 65 66 67 Figure S3. Gross primary productivity for the pre-landuse (blue) and present-day (red) vegetation runs over the southern part (brown box in Figure 1).