Yeast Inquiry Part 1: Quantitation of Cells BACKGROUND: Baker’s yeast (Saccharomyces cerevisiae), has been used by scientists as a “model organism” for decades. In fact, this single-cell fungus is the most studied eukaryotic cell in the history of biology! Our earliest understanding of cancer came from studies on how yeast cells divide. This was the first eukaryotic cell to have its entire genome (all of the genes in its DNA) sequenced. When scientists look for a useful model organism, they look for several features: 1. size 2. ease of manipulation 3. generation time 4. cost Yeast cells are inexpensive and easy to grow. Because this microbe is a eukaryote (ie contains a nucleus and organelles), it has many similarities to our own cells. For these reasons, scientists love to study yeast. OBJECTIVE: For this first step in our inquiry into the properties of yeast, you will learn how to use a microscope and prepare slides for viewing. You will use several key pieces of equipment and glassware, including a measuring pipette and graduated cylinder. You will learn how to prepare dilutions of cells in order to count them. It is important to read all steps in your lab exercise. Safety tip: Handle glass slides and cover slips with care. These are extremely fragile! Carry microscopes appropriately, by the arm, with one hand always supporting under the base (see photo). ANATOMY of a COMPOUND MICROSCOPE Familiarize yourself with the working parts of the compound microscope. The relevant parts of the microscope are the eyepiece, the fixed stage on which to place your specimen (in this case a slide with a drop of yeast suspension), several objectives with different magnifications and a condenser that focuses light from underneath onto your specimen. MATERIALS: You will work in groups of 2-3. You will learn the working parts of the microscope as well as how to measure using a graduated cylinder and a graduated pipette. You will prepare serial dilutions of a yeast suspension (yeast in water with no sugar) prepared by Dr.B. YEAST To make dilutions: Your test tubes are labeled 1/10, 1/100 and 1/1000 respectively. Have one person take the beaker to the sink and get 40-50 mLs of water from the tap. Using the graduated cylinder, put 9 mLs of water into each of the three test tubes. When measuring, be sure to pay attention to the MENISCUS (See picture). You read the volume by looking at the line that matches the lowest part of the meniscus. meniscus Have a person take the 1/10 test tube to the back of the lab and get 1 mL of yeast suspension from the flask prepared by Dr. B. Add the 1 mL of suspension directly into your tube and mix well (by pipetting up and down). Make the remainder of the dilutions according to the following table: Table 1: Dilution Preparation Dilution 1/10 1/100 1/1000 Yeast 1 ml of yeast suspension 1 ml of the 1/10 dilution 1 ml of the 1/100 dilution Water 9 mls of water 9 mls of water 9 mls of water Now add 1 drop of methylene blue to your three dilution tubes and mix well. This will help us to visualize our yeast cells. Place a drop of yeast dilution on a slide and cover with a cover slip (see figure). Focus on the yeast with low power and then move up to the high power objectives. Using the 40X objective, count all the yeast cells in a view field and record in the table below: Dilution Number of Yeast Number of Yeast (other table group1) Number of Yeast (other table group 2) 1/10 1/100 1/1000 Look at your results in the table. What do you notice about the numbers? Compare your results with those from 2 other table groups. Are your results similar or different? If your results were different, why do you think this could be? What can we do with your results now? To determine the number of cells of yeast present, multiply the observed count by the dilution factor. Extending our inquiry Now that you know how to visualize yeast using a microscope, you can plan an investigation that will allow you to manipulate how a yeast community responds to EXTERNAL factors. Think about how you could use the equipment you have used today to test the effects of different variables.