Research Projects 2012 Title of Project Major CHIRI theme(s) Program theme Start date Chief Supervisor Other Supervisors Project outline (For example background, aim, methodology etc) Recurrence of thin melanoma in Western Australia Population Health Research Health Informatics and Genomics Anytime Professor Peter O’Leary Dr Danielle Dye (Pathogenesis & Management of Disease) The incidence of cutaneous melanoma has risen faster than any other malignancy in Caucasian populations in the last 30 years, and Australia has the highest rates worldwide. Although most patients now present with thin melanoma curable by surgical resection, melanoma metastasizes early in disease progression, such that 3% of patients with lesions <0.75 mm thick and 15% with lesions 0.75 – 1.00 mm develop metastatic disease and die within 10 years. Survival in patients with thicker lesions or regional and distant metastases at the time of diagnosis is significantly worse. To date, most research has focussed on identifying features associated with recurrent disease. Identifying recurrence risk in patients with thin melanoma would enable patients to receive less intensive follow up, and allow resources to be directed towards patients at high risk of recurrence. The WA Melanoma Health Study (WAMHS) is a population-based case-collection and bio-specimen resource established in 2006. Participants were recruited through the WA Cancer Registry (WACR), which is notified of all incident cancer cases in WA. The WAMHS collected clinical pathology data, case data (family history, health, lifestyle), serum and DNA from approximately 1400 patients diagnosed with melanoma between January 2006 and September 2009. The strength of WAMHS, compared to other melanoma databases, is the collection of biological specimens (serum, DNA and RNA) in addition to the case and pathology data. This project will focus on disease recurrence in patients with melanoma < 1 mm thick where there is no histological or clinical evidence of metastatic spread at the time of diagnosis and will be conducted in two stages: 1) Patients in the WAMHS who re-present with metastatic disease within 5 years of diagnosis will be identified by data linkage with the WACR. The pathology and case data and controls (i.e. patients with thin primary melanoma who do not represent in 5 years) will be analysed to identify whether any patient characteristics (as collected at recruitment) are associated with relapse. Cases and controls identified from the WAMHS will be re-contacted and asked to complete a second questionnaire regarding their health status and health challenges faced since initial diagnosis. This phase of the study will also validate the cohort, by investigating whether known risk factors for recurrence (age, sex, site of primary lesion) are identified in this population 2) The second phase of the study will investigate genetic and/or biochemical markers that may be associated with recurrence of disease in cases verses controls. Although markers that predict disease progression in late-stage melanoma have been examined (e.g. circulating tumour cells), there are few (if any) predictors of risk in patients with primary melanoma. However, recent research has identified several genetic variants in genes associated with the host Keywords This project is suitable for Essential Qualifications Essential skills Funding Contact for further information immune response and serum micro-RNAs that may be associated melanoma risk. The exact nature of the genetic markers to be identified will be determined iteratively, once phase 1) of the project has been completed. This project represents a new research endeavour combining biochemical and/or genetic analyses with patient clinical outcome. We aim to identify patient characteristics associated with risk of recurrence of thin melanoma, with a long term outcome of developing a risk-stratification model for these patients. Dr Danielle Dye completed her PhD in melanoma cell and molecular biology (laboratory based) and has ongoing projects in this area, and has also been involved in several epidemiological projects using linked datasets and questionnaire data. Prof Peter O’Leary has considerable experience in both clinical biochemistry and in analysis of linked data in genetic screening programs. We would also like to involve an Honours or Masters student in this study. Melanoma, data linkage, biomarkers, genetic testing Honours X Masters X PhD BSc for honours candidates, BSc (Hons) for PhD candidates Suitable for biochemistry, molecular genetics, public health graduates Essential: Ability to work in a multi-disciplinary team, willing to learn new skills. Word processing, literature database searching, writing skills, Desirable: Knowledge of biomedical analytical techniques, genetics, database analysis Applicant should apply for APA, UPA or other scholarship Professor Peter O’Leary, Centre for Population Health Research, Building 400.241 peter.oleary@curtin.edu.au