1 Supplementary Information For “Neurofilament Subunits are Integral Components of Synapses and Modulate Neurotransmission and Behavior In Vivo” Aidong Yuan1,4*, Henry Sershen2,4*, Veeranna1,4*, Balapal S. Basavarajappa 3,6 , Asok Kumar1,4, Audrey Hashim2, Martin Berg1, Ju-Hyun Lee1, 4, Yutaka Sato1, Mala V. Rao1,4, Panaiyur S. Mohan1, Victor Dyakin1, Jean-Pierre Julien7, Virginia M-Y Lee8 and Ralph A. Nixon1,4,5 1 2 Center for Dementia Research, Neurochemistry Division, 3 Analytical Psychopharmacology Division, Nathan Kline Institute, Orangeburg, New York 10962 4 5 Departments of Psychiatry and Cell Biology, New York University School of Medicine, New York, NY 10016, 6Department of Psychiatry, College of Physicians & Surgeons, 7 Columbia University, New York, NY 10032, Centre de Recherche du Centre Hospitalier de l'Université Laval, Département d'anatomie et physiologie de l'Université Laval, 2795 boul. Laurier, Québec G1V 4G2, Canada, 8Department of Pathology & Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104 *AY, HS and V contributed equally to this work. SUPPLEMENTARY MAREIRALS & MATHODS Generation of transgenic animals 2 Adult male or female mice of the C57BL/6J-rich strain, aged 3 - 12 months were used in all experiments. Both age and gender were matched for a specific experiment. Mice were housed at 230C on a 12-h light-dark cycle and were maintained on Lab Chow (Purina Mills, Gray Summit, MO) supplied at libitum. Production of NFL-null (LKO)1, NFMnull (MKO)2, NFH-null (HKO)3 and α-internexin-null (IKO)4 was described before. NFH and NFL double knockout (HL-DKO) mice were generated by cross-breeding NFH-null with NFL-null mice. α-internexin, NFH and NFL triple knockout (IHL-TKO) mice were generated by cross-breeding α-internexin-null, NFH-null with NFL-null mice. The investigator was blind to the conditions tested as much as possible. The experimental protocols were approved by NYU/NKI IACUC Committees under the guidelines of the Institutional Animal Care and Use Committee of the United States. Drugs and Antibodies Cocaine HCl and amphetamine sulfate were obtained from Sigma-Aldrich (St. Louis, MO) and SCH-22390 from Research Biochemicals International (Natick, MA). Mouse anti-dopamine D1 receptor monoclonal antibody (Catalog number MAB5290) is from Chemicon International (Temecula, CA). Monoclonal anti-D1 dopamine receptor antibody (Catalog number D-187) is from Sigma-Aldrich (St. Louis, MO). Neurofilament antibodies used are mAbs to NF-L (NR4, Catalog number N5139), NF-M (NN18, Catalog number N5264) and NF-H (N52, Catalog number N0142) (SigmaAldrich, St. Louis, MO), respectively. Neurofilament antibodies also used are mAb to NFM (RMO-44, Catalog number 13-0500, Invitrogen, Camarillo, CA) and to internexin (Catalog number MAB5224) and polyclonal antibodies to -internexin 3 (Catalog number AB5354), NFL (Catalog number AB1983), NFM (Catalog number AB1987) (Chemicon International, Temecula, CA) and NFH (Catalog number N4142) (Sigma-Aldrich, St. Louis, MO). Monoclonal anti-phosphorylated NFM RMO55 is from Dr. Virginia Lee (University of Pennsylvania). Monoclonal anti-phosphorylated NFH SMI31 (Catalog number SMI-31R) and SMI 34 (Catalog number SMI-34R) antibodies and anti-nonphosphorylated NFH SMI33 antibody (Catalog number SMI-33R) are from Biolegend (Dedham, MA). Anti-NFM rabbit polyclonal antibody was also prepared using purified mouse NFM proteins as antigens. Anti-phospho-p44/42 (Erk1/2) antibody (Catalog number 9101S) and polyclonal anti-Rho B antibody (Catalog number 2098) are from Cell Signaling (Danvers, MA). Anti-GAPDH monoclonal antibody (Catalog number sc-32233) and polyclonal anti-EEA1 antibody (Catalog number sc-33585) are from Santa Cruz Biotechnology (Dallas, TX). The following antibodies are from SigmaAldrich (St. Louis, MO): monoclonal anti-Na+/K+ ATPase (1 Subunit) antibody (Catalog number A277); monoclonal anti--tubulin III antibody (T8578); monoclonal anti-synaptophysin antibody (Catalog number S5768); monoclonal anti-PSD95 antibody (Catalog number P-246) and polyclonal anti-synapsin I antibody (Catalog number S193). Analytical methods Our published methods were used for the following procedures: measurements of locomotion and stereotypic activity5; tissue preparation, SDS-PAGE, and immunoblot analysis6; subcellular fractionations of mouse striatum7, 8; immunocytochemical staining9; immunogold electron microscopy10. Standard procedures11-13 were used to measure longterm potentiation in transverse hippocampal slices (400 m). 4 5-trial social memory test Twenty IHL-TKO mice (10 females and 10 males) were compared with 16 WT control mice (10 females and 6 males) of the same background strain (C57BL/6-rich). These mice were 4-6 months old at the time of the test and individually housed for 7-10 days to permit establishment of a home-cage territory. All test trials were videotaped and subsequently analyzed for investigation time. The first trial began by introducing a stimulus female mouse (never-before-met) into the home cage of a mouse for a 1-min interaction. At the end of the 1-min trial, the stimulus animal was removed and returned to an individual holding cage. For the second trial, after a 10-min inter-trial interval, the same stimulus female was introduced to the mouse for 1-min and later removed to the individual holding cage. For the third and fourth trials, steps were repeated as the second trial. In the fifth “dishabituation” trial, a different stimulus female mouse was introduced to the same mouse for 1-min and later removed to the individual holding cage. Statistical analysis Sample sizes were chosen according to the standard practice in the field. Significance was determined using unpaired two-tailed Student’s t test, the Mann-Whitney test or Two-way ANOVA with Bonferroni’s post hoc test. The variance is similar between the groups that are statistically compared. SUPPLEMENTARY RESULTS 5 Relative neurofilament subunit levels in MKO and HL-DKO mice Because NFM deletion influences the levels of other NF subunits 6, we analyzed levels of NF proteins in striatum, a region critical to the rewarding effect of cocaine, and in cortex from MKO. As expected, NFM is absent in MKO mice (Supplementary Figure S5a-b). While NFH levels in MKO mice were unchanged, NFL levels were reduced to 41.5 ± 6.6% and 38.8 ± 15% of normal levels in striatum and cortex, respectively (mean ± SD, n=4). Complete loss of -internexin, which did not impair D1R responses, had no effect on NF protein levels 4. Similarly, loss of NFL dramatically lowered NFH but NFM was still at about 50% of normal levels 14. Finally, in mice null for both NFH and NFL (HLDKO), NFM levels were 48.2 ± 6.1% of normal levels in striatum (mean ± SD, n=4) and 79.3± 9.6% of normal (mean ± SD, n=4) in the cortex (Supplementary Figure S5c-d). Accordingly, cocaine responses of these mice were not significantly enhanced (p>0.05, Student’s t- test) compared with those in WT controls, despite a trend toward increased responsiveness likely reflecting a borderline lowered NFM level in striatum (Supplementary Figure S5c). Social interaction deficits in IHL-TKO mice We conducted 5-trial social memory assay to determine if IHL-TKO mice have social memory defect. In this test, the subject mouse was given four brief exposures (trials 1-4) in its home cage to the same stimulus mouse (intruder). In the 5th trial, the subject mouse encountered an entirely novel stimulus mouse (novel intruder). WT control mice displayed normal social memory, as demonstrated by a marked habituation (decreased exploration) during the first 4 trials and a striking dishabituation (increased exploration) 6 on the presentation of a novel animal on the 5th trial. In contrast, IHL-TKO mice showed no significant habituation during the 4 exposures to the stimulus mouse or dishabituation to the novel stimulus mouse (Supplementary Figure S4). These results indicate that IHLTKO mice exhibit social interaction deficits. Increased p-ERK in MKO mice after cocaine injection The higher levels of D1R on plasma membranes of cocaine-sensitized MKO mice were associated with accentuated cocaine-induced activation of ERKs and increased phosphorylation of NFs, a major ERK substrate 15 in brain regions (nucleus accumbens, lateral septal nucleus, and cingulate cortex) linked to cocaine sensitization 16-18. MKO and WT mice injected subcutaneously with cocaine (25 mg/kg) or 0.9% saline at 20 min, 120 min, or daily for 7 days were given a challenge injection of cocaine 20 min after the last injection. In saline-treated mice, we could detect phospho-p44/42 ERK1/2 immunoreactivity in neurons within the nucleus accumbens of both WT and MKO mice although the p-ERK signal was higher in MKO mice (p<0.05, n = 4, Student’s t- test). In WT mice, p-ERK immunolabeling was rapid but transient; by 120 min after cocaine administration had returned to almost basal levels. By contrast, in MKO mice, most pERK immunoreactivity in the nucleus accumbens persisted after 120 min. In mice receiving daily cocaine injections for 7 days, p-ERK immunoreactivity was stronger in neurons in nucleus accumbens (p<0.05, n = 8, Student’s t-test) and amygdala (p<0.05, n = 8, Student’s t-test) of MKO mice than in WT controls (Supplementary Figure S6a-c) and persisted in nucleus accumbens, septal nucleus, caudate, cingulate cortex 19 and VTA, including the rostral linear nucleus 20. 7 Using the same 7 day cocaine injection protocol, we observed that p-ERK colocalized with phosphorylated NF in neuron subpopulations within the nucleus accumbens and cingulate cortex of WT mice after chronic cocaine administration. In MKO mice, the numbers of neurons with such co-localization after chronic cocaine administration were significantly greater (p<0.05, n = 4, Student’s t-test), indicating an increased level of ERK signaling in these mice (Supplementary Figure S6d-i). Increased NF phosphorylation was confirmed by Western blot analysis (Supplementary Figure S6jl). Although NFM was absent from MKO mice, NFH phosphorylation identified by SMI31 or SMI34 antibodies was significantly increased in cocaine-treated MKO compared with cocaine treated WT controls (p<0.05, Student’s t-test). NFM modulates D1 receptor- stimulated hippocampal LTP Dopamine has been shown to induce a long-lasting synaptic potentiation in hippocampal slices 21, 22 through D1/D5 receptors 23. Consistent with these findings, we found that application to the bath of 50µM D1/D5 agonist SKF 38393 for 15 min produced long lasting synaptic potentiation in WT mice. Moreover, this potentiation was enhanced in MKO mice. Application of SKF 38393 for 15 min produced an enhanced and persisting increase of the EPSP slopes in NFM null hippocampal slices compared to that in WT mice (Supplementary Figure S10). The synaptic potentiation induced by the D1/D5 agonist SKF 38393 had a very slow onset. Potentiation started 40-50 min after application and the mean potentiation 2 hr after application of SKF 38393 was 171.17 % ± 4.8 % (n=6) for WT mice and 198 ± 5.5 (Mean ± SEM, n=6) for MKO mice (p <0.01, Student’s t- test). This action of SKF 38393 was specific for D1/D5 receptors: a specific 8 antagonist of the D1/D5 receptors, SCH 23390, prevented the potentiation in hippocampal slices from both WT and MKO mice (Supplementary Figure S10). SUPPLEMENTARY REFERENCES 1. Zhu Q, Couillard-Despres S, Julien JP. Delayed maturation of regenerating myelinated axons in mice lacking neurofilaments. Exp Neurol 1997; 148(1): 299316. 2. Jacomy H, Zhu Q, Couillard-Despres S, Beaulieu JM, Julien JP. Disruption of type IV intermediate filament network in mice lacking the neurofilament medium and heavy subunits. J Neurochem 1999; 73(3): 972-984. 3. Rao MV, Houseweart MK, Williamson TL, Crawford TO, Folmer J, Cleveland DW. Neurofilament-dependent radial growth of motor axons and axonal organization of neurofilaments does not require the neurofilament heavy subunit (NF-H) or its phosphorylation. J Cell Biol 1998; 143(1): 171-181. 4. Levavasseur F, Zhu Q, Julien JP. No requirement of alpha-internexin for nervous system development and for radial growth of axons. Brain Res Mol Brain Res 1999; 69(1): 104-112. 5. Rao MV, McBrayer MK, Campbell J, Kumar A, Hashim A, Sershen H et al. Specific calpain inhibition by calpastatin prevents tauopathy and neurodegeneration and restores normal lifespan in tau P301L mice. J Neurosci 2014; 34(28): 9222-9234. 6. Yuan A, Rao MV, Sasaki T, Chen Y, Kumar A, Veeranna et al. Alpha-internexin is structurally and functionally associated with the neurofilament triplet proteins in the mature CNS. J Neurosci 2006; 26(39): 10006-10019. 7. Phillips GR, Huang JK, Wang Y, Tanaka H, Shapiro L, Zhang W et al. The presynaptic particle web: ultrastructure, composition, dissolution, and reconstitution. Neuron 2001; 32(1): 63-77. 8. Louneva N, Cohen JW, Han LY, Talbot K, Wilson RS, Bennett DA et al. Caspase-3 is enriched in postsynaptic densities and increased in Alzheimer's disease. The American journal of pathology 2008; 173(5): 1488-1495. 9. Yuan A, Sasaki T, Rao MV, Kumar A, Kanumuri V, Dunlop DS et al. Neurofilaments form a highly stable stationary cytoskeleton after reaching a critical level in axons. J Neurosci 2009; 29(36): 11316-11329. 9 10. Yuan A, Sasaki T, Kumar A, Peterhoff CM, Rao MV, Liem RK et al. Peripherin is a subunit of peripheral nerve neurofilaments: implications for differential vulnerability of CNS and peripheral nervous system axons. J Neurosci 2012; 32(25): 8501-8508. 11. Vitolo OV, Sant'Angelo A, Costanzo V, Battaglia F, Arancio O, Shelanski M. Amyloid beta -peptide inhibition of the PKA/CREB pathway and long-term potentiation: reversibility by drugs that enhance cAMP signaling. Proc Natl Acad Sci U S A 2002; 99(20): 13217-13221. 12. Sadrian B, Subbanna S, Wilson DA, Basavarajappa BS, Saito M. Lithium prevents long-term neural and behavioral pathology induced by early alcohol exposure. Neuroscience 2012; 206: 122-135. 13. Subbanna S, Shivakumar M, Psychoyos D, Xie S, Basavarajappa BS. Anandamide-CB1 receptor signaling contributes to postnatal ethanol-induced neonatal neurodegeneration, adult synaptic, and memory deficits. J Neurosci 2013; 33(15): 6350-6366. 14. Yuan A, Rao MV, Kumar A, Julien JP, Nixon RA. Neurofilament transport in vivo minimally requires hetero-oligomer formation. J Neurosci 2003; 23(28): 9452-9458. 15. Veeranna, Amin ND, Ahn NG, Jaffe H, Winters CA, Grant P et al. Mitogenactivated protein kinases (Erk1,2) phosphorylate Lys-Ser-Pro (KSP) repeats in neurofilament proteins NF-H and NF-M. J Neurosci 1998; 18(11): 4008-4021. 16. Berhow MT, Hiroi N, Nestler EJ. Regulation of ERK (extracellular signal regulated kinase), part of the neurotrophin signal transduction cascade, in the rat mesolimbic dopamine system by chronic exposure to morphine or cocaine. J Neurosci 1996; 16(15): 4707-4715. 17. Valjent E, Corvol JC, Pages C, Besson MJ, Maldonado R, Caboche J. Involvement of the extracellular signal-regulated kinase cascade for cocainerewarding properties. J Neurosci 2000; 20(23): 8701-8709. 18. Lu L, Hope BT, Dempsey J, Liu SY, Bossert JM, Shaham Y. Central amygdala ERK signaling pathway is critical to incubation of cocaine craving. Nat Neurosci 2005; 8(2): 212-219. 19. Devinsky O, Morrell MJ, Vogt BA. Contributions of anterior cingulate cortex to behaviour. Brain 1995; 118 ( Pt 1): 279-306. 20. Del-Fava F, Hasue RH, Ferreira JG, Shammah-Lagnado SJ. Efferent connections of the rostral linear nucleus of the ventral tegmental area in the rat. Neuroscience 2007; 145(3): 1059-1076. 10 21. Frey U, Huang YY, Kandel ER. Effects of cAMP simulate a late stage of LTP in hippocampal CA1 neurons. Science 1993; 260(5114): 1661-1664. 22. Gribkoff VK, Ashe JH. Modulation by dopamine of population responses and cell membrane properties of hippocampal CA1 neurons in vitro. Brain Res 1984; 292(2): 327-338. 23. Huang YY, Kandel ER. D1/D5 receptor agonists induce a protein synthesisdependent late potentiation in the CA1 region of the hippocampus. Proc Natl Acad Sci U S A 1995; 92(7): 2446-2450. SUPPLEMENTARY FIGURE LEGENDS Supplementary Figure S1: Absence of significant degradation products of NFM from synaptic NF preparations of mouse striatum by antibody to NFM. Lanes 1-3 were from three different WT mice and lanes 4-6 from three different MKO animals. Supplementary Figure S2: Morphometric confirmation of post-embedding immunogold procedure for localization of NF proteins within synapses. An alternative pre-embedding method using positive (a; b is an inset) (myelinated axon, linear labeling of NF with anti-NFM) and negative controls (c, d) (IHL-TKO mice, no labeling with NFM) confirms NF protein localization within synapses. (e) Synaptic labeling with monoclonal anti-NFM. (f) Synaptic labeling with polyclonal anti-NFL. (g) Synaptic labeling with polyclonal anti-NFH. (h) Synaptic labeling with monoclonal anti-internexin. (i) Morphometry of NF-gold particles shows much greater immunogold labeling in wild-type mice (p<0.0001) per unit area than in IHL-TKO mice. Scale bars, 250nm in a, c, 80nm in b, 400nm in d, 200nm in e, f, 150nm in g, h. 11 Supplementary Figure S3: EM images of isolated striatal synaptosomes (a and b). Mito: mitochondrion; SV: synaptic vesicles; PSD: postsynaptic density. Scale bar: 100nm in a and b. Supplementary Figure S4: Social interaction deficits in IHL-TKO mice based on the 5trial social memory test. WT mice displaying normal social recognition showed the standard pattern of high socialization time (trial 1) followed by decreased socialization time (trials 2-4; P = 0.001 at trial 3 and P = 0.0005 at trial 4) and increased socialization time with a novel mouse (trial 5, P < 0.0001). IHL-TKO mice displaying social recognition defects showed a disrupted pattern of habituation to the same mouse (trials 14) and dishabituation to a novel mouse (trial 5, P = 0.9841). Supplementary Figure S5: Immunoblot analyses of relative neurofilament subunit levels in wild-type, MKO and HL-DKO mice. Relative levels of each subunit protein were normalized to total protein and quantified by using mAbs to NFH, NFM and NFL and NIH imaging software. As expected, NFM was absent in MKO (a, b) and NFH and NFL were absent in HL-DKO mice (c, d). In the absence of NFM, NFH slightly increased in striatum (P = 0.0571) and frontal cortex (P = 0.0235) while NFL significantly decreased in both striatum (P = 0.0006) and frontal cortex (P = 0.029). In the absence of NFH and NFL, NFM significantly decreased in striatum (P = 0.0001) and slightly decreased in frontal cortex (P = 0.0882). Each measurement is the mean ± SD from 4 animals. HL: HL-DKO. 12 Supplementary Figure S6: Increased p-ERK in MKO mice after cocaine injection. Increased p-ERK in neurons of nucleus accumbens (NA) and amygdala of MKO mice compared with wild-type 120 min after cocaine injection (a-c). Increased p-Erk colocalized with phosphorylated NFs in neurons of cingulate cortex following subcutaneous injections of cocaine (25mg/kg) and analyzed after 7 days (20 min after the last injection) (d-i). Increased phosphorylated NFH in neurons of striatum, identified by SMI31 (k, Mean ± SD, n=3, p=0.0369) or SMI34 (l, Mean± SD, n=3, p=0.0418), were also demonstrated by western blotting in cocaine treated MKO mice compared with cocaine treated wild-type mice (j). sal: saline; coc: cocaine; β3Tub: β3 tubulin. p-ERK: phosphorylated ERK. Supplementary Figure S7: Levels of dopamine, serotonin, and their metabolites in the absence of NFM. Levels of dopamine, serotonin, and their metabolites in striatum (a), hippocampus (b) and frontal cortex (v), measured using HPLC-electrochemical detection methods revealed no major differences in biogenic amine levels in MKO mice (black bar) compared with wild-type controls (white bar) (P>0.05 for all the metabolites in 3 different areas). Measurements are mean ± SEM from at least 8 animals for each group. Supplementary Figure S8: The total level of D1 receptor is not altered significantly in the striatum of MKO mice (p = 0.62 Student’s t- text, n=4) (a, b). Supplementary Figure S9: Enrichment of plasma membrane and endosome fractions. Plasma membrane-enriched and endosome-enriched fractions of mouse striata were 13 isolated following subcutaneous injections of cocaine (25mg/kg/day) or saline for 7 days. The enrichment was confirmed by plasma membrane marker ATPase or endosome marker EEA1. Supplementary Figure S10: Enhanced D1/D5 receptor agonist –induced long lasting synaptic potentiation in the absence of NFM. (a) SKF 38393 (50µM; 15 min) applied into bath solution (bar) induced an increase in the slope of EPSP in both wild-type and MKO mice hippocampal slices (mean ± SEM; n=6). Combined application of D1/D5 receptor antagonist SCH 23390 (2µM; 30 min) with SKF 38393 prevented the SKF-induced potentiation in both wild type and NFM null mice hippocampal slices (n = 6). b: Representative EPSP traces obtained before and 2hr after the application of SKF 3893.