1 SUPPORTING INFORMATION 2 Additional Supporting Information may be found in the online version of this article: 3 Appendix S1: Underlying assumptions of the Koopowitz stochastic extinction model. 4 It is important to note that the Koopowitz extinction model has several underlying 5 assumptions (Koopowitz et al., 1994). First, the model assumes that Lepanthes spp. are 6 distributed randomly with respect to forest conversion patterns. This implies that all species are 7 equally prone to extinction due to habitat loss. Second, the model assumes that all forests are 8 converted equally. This indicates that primary and secondary forests, for example, are converted 9 at the same rates and that species occurring in either type are equally vulnerable to habitat loss. 10 Third, the model assumes that habitat conversion rates are reasonably accurate. This assumption 11 suggests that the habitat conversion rates in the near future will remain similar to the rates of the 12 recent past. Fourth, the model assumes that the taxonomy used by botanists is consistent. This 13 assumption infers that the number of species in a given area is not affected by differences in how 14 species are described. Fifth, the model assumes that habitat conversions are complete and render 15 the habitat sterile. This assumption indicates that deforestation of an area is equivalent to 16 complete loss of suitable habitat in that area. Sixth, the model assumes that the sites occupied by 17 a species are smaller than the areas being converted. This assumption implies that when a patch 18 of habitat is converted, all individuals at that site are lost. Seventh, the model assumes that the 19 number of sites is static. This assumption denotes that there will be no significant dispersal of 20 propagules to new sites within the time frame of the analysis. Lastly, the model assumes that the 21 species distribution profiles are accurate. This assumption suggests that the collections for 22 individual species are representative of the actual distribution. Despite these assumptions, the 23 model’s predictive capabilities should be substantial provided robust data sets are used in the 24 analysis. For additional discussion of underlying assumptions in the Koopowitz stochastic 25 extinction model, see Koopowitz (1992) and Koopowitz et al. (1994). 26 References 27 Koopowitz, H. (1992) A stochastic model for the extinction of tropical orchids. Selbyana, 13, 28 29 115-122. Koopowitz, H., Thornhill, A.D. & Andersen, M. (1994) A general stochastic model for the 30 prediction of biodiversity losses based on habitat conversion. Conservation Biology, 8, 31 425-438. 32 33 34 Appendix S2: Sources of distribution data used in this analysis. Distribution data sources for this analysis included collection records from numerous 35 herbaria and botanical gardens including Missouri Botanical Garden, New York Botanical 36 Garden, Lankester Botanical Garden, Royal Botanic Gardens, Kew, Selby Botanical Garden, the 37 Field Museum Herbarium, the Smithsonian Museum Herbarium, the American Museum of 38 Natural History Herbarium, the University of Wisconsin Herbarium, the Oakes Ames Orchid 39 Herbarium, and the University of Puerto Rico Herbarium. Additionally, regional floras and plant 40 checklists (e.g. Ames & Correll, 1952; Schweinfurth, 1958; Foldats, 1970; Hamer, 1974; 41 Williams et al., 1980; Werkhoven, 1986; Ackerman, 1995; Salazar & Soto-Arenas, 1996; Balick 42 et al., 2000; Archila-Morales, 2001; Berry et al., 2003; Farfán et al., 2003; Luer, 2003; 43 Llamacho & Larramendi, 2005; Nelson-Sutherland, 2008; Luer, 2009, 2010; Luer & Thoerle, 44 2012), as well as scientific publications on specific species or groups of species (e.g. 45 Hespenheide, 1973; Luer, 1986; Carnevali & de Carnevali, 1993; Catling & Salazar, 1994; Luer, 46 1994, 1996, 1997, 1999, 2000; Ackerman et al., 2001; Pupulin, 2001; Blanco, 2003; Bogarín & 47 Fernández, 2010; Pupulin et al., 2010; Bogarín et al., 2012; Crain & Tremblay, 2012) were 48 consulted for distribution data. 49 References 50 Ackerman, J.D. (1995) An Orchid Flora of Puerto Rico and the Virgin Islands. The New York 51 52 53 Botanical Garden, Bronx, New York. Ackerman, J.D., Tremblay, R.L. & Whitten, W.M. (2001) Notes on the Caribbean orchid flora. III. New species of Basiphyllaea and Lepanthes. Lindleyana, 16, 13-16. 54 Ames, O. & Correll, D.S. (1952) Orchids of Guatemala. Fieldiana: Botany, 26, 194-205. 55 Archila-Morales, F.L. (2001) Lepanthes de Guatemala. Editorial Kamar, Guatemala City, 56 57 58 Guatemala. Balick, M.J., Nee, M.H. & Atha, D.E. (2000) Checklist of the Vascular Plants of Belize With Common Names and Uses. The New York Botanical Garden Press, Bronx, New York. 59 Berry, P.E., Yatskievych, K. & Holst, B.K. (eds.) (2003) Flora of the Venezuelan Guayana, 60 Volume 7, Myrtaceae-Plumbaginaceae. Missouri Botanical Garden Press, St. Louis, 61 Missouri. 62 63 64 65 66 67 Blanco, M.A. (2003) Lepanthes gerardensis (Orchidaceae), a new species from Costa Rica. Lankesteriana, 8, 19-22. Bogarín, D. & Fernández, M. (2010) Lepanthes arenasiana (Pleurothallidinae: Orchidaceae), a new species from Costa Rica. Lankesteriana, 9, 487-489. 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