Big Idea 3 Review: Living systems store, retrieve, transmit, and respond to information essential to life processes. Explaining how the structural features of DNA and RNA allow heritable information to be replicated, stored expressed, and transmitted to future generations. Explaining how the steps in the cell cycle allow transmission of heritable information between generations and contribute to genetic diversity. Meiosis reduces the number of chromosome sets from diploid to haploid Like mitosis, meiosis is preceded by the replication of chromosomes Meiosis takes place in two sets of cell divisions, called meiosis I and meiosis II The two cell divisions result in four daughter cells, rather than the two daughter cells in mitosis Each daughter cell has only half as many chromosomes as the parent cell In the first cell division (meiosis I), homologous chromosomes separate Meiosis I results in two haploid daughter cells with replicated chromosomes In the second cell division (meiosis II), sister chromatids separate Meiosis II results in four haploid daughter cells with unreplicated chromosomes Three events are unique to meiosis, and all three occur in meiosis l: Synapsis and crossing over in prophase I: Homologous chromosomes physically connect and exchange genetic information At the metaphase plate, there are paired homologous chromosomes (tetrads), instead of individual replicated chromosomes At anaphase I, it is homologous chromosomes, instead of sister chromatids, that separate and are carried to opposite poles of the cell Evolutionary Significance of Genetic Variation Within Populations Natural selection results in accumulation of genetic variations favored by the environment Sexual reproduction contributes to the genetic variation in a population, which ultimately results from mutations Genetic variation produced in sexual life cycles contributes to evolution Mutations (changes in an organism’s DNA) are the original source of genetic diversity Mutations create different versions of genes Reshuffling of different versions of genes during sexual reproduction produces genetic variation Origins of Genetic Variation Among Offspring The behavior of chromosomes during meiosis and fertilization is responsible for most of the variation that arises in each generation Three mechanisms contribute to genetic variation: Independent assortment of chromosomes Crossing over Random fertilization Independent Assortment of Chromosomes Homologous pairs of chromosomes orient randomly at metaphase I of meiosis In independent assortment, each pair of chromosomes sorts maternal and paternal homologues into daughter cells independently of the other pairs The number of combinations possible when chromosomes assort independently into gametes is 2n, where n is the haploid number For humans (n = 23), there are more than 8 million (223) possible combinations of chromosomes Random Fertilization Random fertilization adds to genetic variation because any sperm can fuse with any ovum (unfertilized egg) The fusion of gametes produces a zygote with any of about 64 trillion diploid combinations Crossing over adds even more variation Each zygote has a unique genetic identity Evolutionary Significance of Genetic Variation Within Populations Natural selection results in accumulation of genetic variations favored by the environment Sexual reproduction contributes to the genetic variation in a population, which ultimately results from mutations Using at least two commonly used technologies, describe how humans manipulate heritable information and possible consequences. Determining Gene Function One way to determine function is to disable the gene and observe the consequences Using in vitro mutagenesis, mutations are introduced into a cloned gene, altering or destroying its function When the mutated gene is returned to the cell, the normal gene’s function might be determined by examining the mutant’s phenotype In nonmammalian organisms, a simpler and faster method, RNA interference (RNAi), has been used to silence expression of selected genes Identifying mathematical evidence that supports the roles of chromosomes and fertilization in the passage of traits from parent to offspring. Justify the effects of a change in the cell cycle mitosis and/or meiosis will have on chromosome structure, gamete viability, genetic diversity, and evolution Predict possible effects that alterations in the normal process of meiosis will have on the phenotypes of offspring compared to the normal situation and connect the outcomes to issues surrounding human genetic diseases. Down’s syndrome (trisomy 21), Kleinfelter’s syndrome (XXY), Turner’s syndrome (XO) Non-disjunction Failure of chromosome pairs to separate during meiosis Results in gametes with too many or too few chromosomes -Aneuploidy: abnormal # of a certain chromosome -Polyploidy: more than 2 complete chromosome sets An embryo needs at least one X chromosome to survive Justifying whether a given data set supports Mendelian inheritance. Apply mathematical routines to determine Mendelian patterns of inheritance provided by data sets, and, using appropriate examples, explain at the chromosome, cellular, and offspring (organism) levels why certain traits do or do not follow Mendel’s model of inheritance Extending Mendelian Genetics for a Single Gene Inheritance of characters by a single gene may deviate from simple Mendelian patterns in the following situations: When alleles are not completely dominant or recessive When a gene has more than two alleles When a gene produces multiple phenotypes Pleiotropy Most genes have multiple phenotypic effects, a property called pleiotropy For example, pleiotropic alleles are responsible for the multiple symptoms of certain hereditary diseases, such as cystic fibrosis and sickle-cell disease Using appropriate examples, explaining how gene regulation allows for cell specialization and efficient cell function. Justify how various modes of gene regulation (positive and negative) can explain the differences seen at the cellular, organismal, and population level. Predict how changes in regulation will affect cellular functions Different cell types result from differential gene expression in cells with the same DNA Differences between cells in a multicellular organism come almost entirely from gene expression, not differences in the cells’ genomes These differences arise during development, as regulatory mechanisms turn genes off and on Differential Gene Expression Differences between cell types result from differential gene expression, the expression of different genes by cells within the same genome In each type of differentiated cell, a unique subset of genes is expressed Many key stages of gene expression can be regulated in eukaryotic cells Regulation of Transcription Initiation Chromatin-modifying enzymes provide initial control of gene expression by making a region of DNA either more or less able to bind the transcription machinery Organization of a Typical Eukaryotic Gene Associated with most eukaryotic genes are control elements, segments of noncoding DNA that help regulate transcription by binding certain proteins Control elements and the proteins they bind are critical to the precise regulation of gene expression in different cell types The Roles of Transcription Factors To initiate transcription, eukaryotic RNA polymerase requires the assistance of proteins called transcription factors General transcription factors are essential for the transcription of all protein-coding genes In eukaryotes, high levels of transcription of particular genes depend on control elements interacting with specific transcription factors Some transcription factors function as repressors, inhibiting expression of a particular gene Some activators and repressors act indirectly by influencing chromatin structure Operons: The Basic Concept In bacteria, genes are often clustered into operons, composed of An operator, an “on-off” switch A promoter Genes for metabolic enzymes An operon can be switched off by a protein called a repressor A corepressor is a small molecule that cooperates with a repressor to switch an operon off Repressible and Inducible Operons: Two Types of Negative Gene Regulation A repressible operon is one that is usually on; binding of a repressor to the operator shuts off transcription The trp operon is a repressible operon An inducible operon is one that is usually off; a molecule called an inducer inactivates the repressor and turns on transcription The classic example of an inducible operon is the lac operon, which contains genes coding for enzymes in hydrolysis and metabolism of lactose Using an appropriate example, describing a signal transduction pathway mechanism that affects protein expression. Local and Long-Distance Signaling Cells in a multicellular organisms communicate by chemical messengers Animal and plant cells have cell junctions that directly connect the cytoplasm of adjacent cells In local signaling, animal cells may communicate by direct contact Local and Long-Distance Signaling Cells in a multicellular organisms communicate by chemical messengers Animal and plant cells have cell junctions that directly connect the cytoplasm of adjacent cells In local signaling, animal cells may communicate by direct contact Describing the basic processes by which a change in a DNA sequence results in a change in a peptide sequence. Point mutations can affect protein structure and function Mutations are changes in the genetic material of a cell or virus Point mutations are chemical changes in just one base pair of a gene The change of a single nucleotide in a DNA template strand leads to production of an abnormal protein Types of Frame-shift Mutations mutations within a gene can be divided into two general categories Base-pair insertions Base-pair deletions Describing two processes that increase genetic variation and explaining how genetic variation allows for natural selection within a population Mutations, crossing over, independent assortment, sexual reproduction Describing several mechanisms that result in increased genetic variation and rapid evolution of viruses. RNA viruses have no “proof-reading” of their nucleotides so mutations go unchanged; proviruses can pick up DNA from their host and incorporate it into their genome Describing how both plants and animals use cell-to-cell communication for cellular processes using an appropriate example from each. Insulin/glucagon in animals De-etiolation, phototropism, photoperiodism in plants Signal transduction pathways link signal reception to response Plants have cellular receptors that detect changes in their environment For a stimulus to elicit a response, certain cells must have an appropriate receptor A potato left growing in darkness produces shoots that look unhealthy and lacks elongated roots These are morphological adaptations for growing in darkness, collectively called etiolation After exposure to light, a potato undergoes changes called de-etiolation, in which shoots and roots grow normally A potato’s response to light is an example of cell-signal processing The stages are reception, transduction, and response Phytochromes exist in two photoreversible states, with conversion of Pr to Pfr triggering many developmental responses Explaining key features of models that illustrate how changes in a signal pathway can alter cellular responses Construct a model that illustrates how chemical signals can alter cellular responses. Predict the effects of changes in the signal pathway on cellular responses using appropriate examples. Type I diabetes mellitus (insulin-dependent) is an autoimmune disorder in which the immune system destroys pancreatic beta cells Type II diabetes mellitus (non-insulin-dependent) involves insulin deficiency or reduced response of target cells due to change in insulin receptors Invertebrate regulatory systems also involve endocrine and nervous system interactions Diverse hormones regulate homeostasis in invertebrates In insects, molting and development are controlled by three main hormones: Brain hormone stimulates release of ecdysone from the prothoracic glands Ecdysone promotes molting and development of adult characteristics Juvenile hormone promotes retention of larval characteristics Describing how behavior is modified in response to external and internal cues for both animals and plants using appropriate examples from each. In male stickleback fish, the stimulus for attack behavior is the red underside of an intruder When presented with unrealistic models, as long as some red is present, the attack behavior occurs Dietary Influence on Mate Choice Behavior An example of environmental influence is the role of diet in mate selection by Drosophila mojavensis Experiments have demonstrated that food eaten by larvae influences later mate choice in females It has been proposed that the physiological basis for the observed mate preferences was differences in hydrocarbons in the exoskeletons of the flies Chemical Communication Many animals that communicate through odors emit chemical substances called pheromones When a minnow or catfish is injured, an alarm substance in the fish’s skin disperses in the water, inducing a fright response among fish in the area Gravity Response to gravity is known as gravitropism Roots show positive gravitropism Stems show negative gravitropism Mechanical Stimuli The term thigmomorphogenesis refers to changes in form that result from mechanical perturbation Rubbing stems of young plants a couple of times daily results in plants that are shorter than controls Thigmotropism is growth in response to touch It occurs in vines and other climbing plants Rapid leaf movements in response to mechanical stimulation are examples of transmission of electrical impulses called action potentials During drought, plants respond to water deficit by reducing transpiration Deeper roots continue to grow Heat-shock proteins help plants survive heat stress Altering lipid composition of membranes is a response to cold stress Plants defend themselves against herbivores and pathogens Plants counter external threats with defense systems that deter herbivory and prevent infection or combat pathogens Describing how the nervous system detects external and internal stimuli and transmits signals along and between nerve cells Describe how changes within nerve cells and the nervous system produce responses to the stimuli The Resting Potential Resting potential is the membrane potential of a neuron that is not transmitting signals Resting potential depends on ionic gradients across the plasma membrane Concentration of Na+ is higher in the extracellular fluid than in the cytosol The opposite is true for K+ Production of Action Potentials Depolarizations are usually graded only up to a certain membrane voltage, called the threshold A stimulus strong enough to produce depolarization that reaches the threshold triggers a response called an action potential An action potential is a brief all-or-none depolarization of a neuron’s plasma membrane It carries information along axons Voltage-gated Na+ and K+ channels are involved in producing an action potential When a stimulus depolarizes the membrane, Na+ channels open, allowing Na+ to diffuse into the cell As the action potential subsides, K+ channels open, and K+ flows out of the cell During the refractory period after an action potential, a second action potential cannot be initiated Conduction of Action Potentials An action potential can travel long distances by regenerating itself along the axon At the site where the action potential is generated, usually the axon hillock, an electrical current depolarizes the neighboring region of the axon membrane Neurons communicate with other cells at synapses In an electrical synapse, current flows directly from one cell to another via a gap junction The vast majority of synapses are chemical synapses In a chemical synapse, a presynaptic neuron releases chemical neurotransmitters stored in the synaptic terminal When an action potential reaches a terminal, the final result is release of neurotransmitters into the synaptic cleft Direct Synaptic Transmission Direct synaptic transmission involves binding of neurotransmitters to ligand-gated ion channels Neurotransmitter binding causes ion channels to open, generating a postsynaptic potential After release, the neurotransmitter diffuses out of the synaptic cleft It may be taken up by surrounding cells and degraded by enzymes