What Colors Your World? Biotechnology Activities with Food Dyes Instructors - Bio-Rad Curriculum and Training Specialists Sherri Andrews, Ph.D., Eastern US sherri_andrews@bio-rad.com Damon Tighe, Western US damon_tighe@bio-rad.com Leigh Brown, M.A., Central US leigh_brown@bio-rad.com 2 Biotechnology Explorer™ | explorer.bio-rad.com Separation technology: How do you separate two or more compounds from each other? Materials to be Separated Property Used to Separate Components Explanation Iron filings from other metals Magnetism Iron filings will be attracted to a magnet while other metals will not Salt from sand Solubility Salt will dissolve in water and can be separated from the sand Caffeine from coffee beans Solubility A solvent is used that selectively dissolves the caffeine (such as dichloromethane or ethyl acetate) but not most of the remaining coffee oils Ethanol from fermented grain Boiling point Ethanol will boil off at a lower temperature than the other components of the fermented grain Wheat from chaff Density Wheat kernels are more dense and will fall to the ground while chaff can be blow away by the wind Tea from tea leaves Size Filtration can be used to separate the liquid extract from the large tea leaves 3 Biotechnology Explorer™ | explorer.bio-rad.com Combining Science, Engineering and Math to Develop a Separation Technology Engineering – Design parameter based; no single “correct answer” Science – Hypothesis driven; try to find specific cause/effect 4 Biotechnology Explorer™ | explorer.bio-rad.com Analysis Inexpensive separates well Measurements Best separation material? Understanding the chemistry of mobile phaseSalt? Polar? Non-polar? Chromatography • Used to separate biomolecules based in their physical characteristics may include: • • • • 5 size charge hydrophobicity interaction with other molecules Biotechnology Explorer™ | explorer.bio-rad.com The System All forms of chromatography have a – Stationary phase (remains stationary and is a solid or a liquid supported by a solid) – Mobile phase (a liquid or a gas that travels through the stationary phase and carries the parts of the mixture) 6 Biotechnology Explorer™ | explorer.bio-rad.com Types of Chromatography Paper – Paper serves as the stationary phase. – The paper strip is placed in a solvent (mobile) phase which carries the mixture through the paper. – Parts of the mixture will travel at different rates separating the parts Column – – – – – 7 The stationary phase is packed into a column The column is equilibrated (saturated with solvent) Sample is added to the column Buffers are added to separate the mixture Samples are collected in intervals called fractions Biotechnology Explorer™ | explorer.bio-rad.com Be an Engineer – Design your own! Select materials that you will use to separate your Kool Aid into the food dyes that make it the color it appears You will do this by – Paper chromatography – Column chromatography 8 Biotechnology Explorer™ | explorer.bio-rad.com What are some of the design factors we want to think about? 9 Type Mobile Phase Stationary Phase Paper Water Paper type Column 1X PBS HIC Media Syringe Alcohol Cotton Commercial Column Biotechnology Explorer™ | explorer.bio-rad.com Column Type Dye separation from Kool Aid Using Paper Chromatography 1. Choose your paper type (stationary phase) 2. Cut it into .75 x 4 inch strips 3. Place 50ul of Kool-Aid at one end using a DPTP 10 Biotechnology Explorer™ | explorer.bio-rad.com 4. Place 1 ml of your mobile phase into a medicine cup 5. Place the strip Kool-Aid side down into the mobile phase 11 Biotechnology Explorer™ | explorer.bio-rad.com Building and Using A Column to Separate Your Kool-Aid 1. Choose your Column Type (HIC, Empty Column, Syringe) 2. If empty column or syringe add stationary phase by stuffing it with a cotton ball 12 Biotechnology Explorer™ | explorer.bio-rad.com Building and Using A Column to Separate Your Kool-Aid 3. Choose your mobile phase (water, alcohol, or 1xPBS) 4. Place column in collection tube 5. Add 2 ml of mobile phase to column 6. Let it flow until it no longer drips 13 Biotechnology Explorer™ | explorer.bio-rad.com Building and Using A Column to Separate Your Kool-Aid 7. Move column to next collection tube 8. Using a DPTP add 1ml of Kool-Aid to the top of the column 9. Let it flow until it no longer drips (this is fraction 1) 10. Move to the next column 11. Continue steps 5 and 6 until the eluate (fluid coming off the column) is clear 14 Biotechnology Explorer™ | explorer.bio-rad.com Compare Results Which paper, mobile phase worked best for paper chromatography? Which column, mobile phase worked best for column chromatography? 15 Biotechnology Explorer™ | explorer.bio-rad.com