1 The Twisting Tale of DNA: Ted ED DNA Vocabulary quizzes Quiz #1 1. Nucleotide 2. Base Pairing 3. Transformation 4. Deoxyribose 5. Double Helix 6. Chromatin 7. Replication 8. DNA Polymerase 9. Helicase 10. Chromosome 11. Complementary 12. DNA 2 UNIT GOALS 3 – Distinguish between DNA and RNA. – Explain the role of DNA in storing and transmitting cellular information. – Describe the relationships between changes in DNA and potential appearance of new traits including – alterations during replication, insertions, deletions, substitutions, mutagenic factors, radiation, chemicals. – Examine the use of DNA technology in forensics, medicine and agriculture. DNA • Function: Store & Transmit genetic information • Acts as a library or storehouse of informtion. CLIP • DNA is located in the nucleus. 4 Discovery of DNA Many People contributed to the discovery of DNA. 5 1928 Frederick Griffith (Transformation) 6 Experiments with Diplococcus pneumonia (bacterium responsible for witnessed a transformation. pneumonia), •These experiments are recognized as the first in a series that lead to the conclusion that DNA is the carrier of genetic information, the genetic material. DNA is the molecule of inheritance 1944 Oswald Avery • Repeated Griffith’s experiment • Looking for “what” is being transferred. • Used enzymes to break up carbohydrates, lipids and proteins-transformation still took place. • Used enzymes to break up DNA-transformation did not happen. • Conclusion: DNA is a Nucleic Acid 7 1952 Rosalind Franklin & Maurice Wilkins • Used x-ray diffraction to see DNA. • Conclusions: DNA is twisted like a spiral staircase Double helix 8 1952 Erwin Chargaff • Discovered that the – amount of Adenine = amount Thymine – amount of cytosine = amount of guanine. • True in all organisms tested. • Called Chargaff’s Rule. • Conclusions: 1. amt A is = to amt of T 2. amt C is = to amt of G 9 1953 Watson and Crick “Put it all together” Developed the structure of DNA that we know today. Conclusions: Described the complete structure of DNA. CLIP 10 11 12 Structure of DNA 1. Double Helix. -Twisted ladder or spiral staircase 2. Two stranded 3. Held together by hydrogen bonds 4. Made of four Nucleotides 1. Phosphate 2. Base ( Nitrogen) 3. Sugar 13 Structure of DNA Remember: • DNA is a nucleic acid. • Nucleic acids are made of nucleotides 14 Structure of DNA Nucleotides • Long chain of Nucleotides • There are four nucleotide that make up DNA • Each nucleotide has three parts: 1-Sugar, 2-Phosphate, 3-Base) • The sugar is Deoxyribose • There are four bases 15 4 Bases • • • • Adenine Guanine Cytosine Thymine 14 Sides of the “Ladder” are made up of sugar and phosphate. 16 Adenine always pairs with Thymine Cytosine always pairs with Guanine 17 Would Thymine be able to pair up with Guanine? 18 19 CLIP 20 The sequence of nucleotides forms the unique genetic information of an organism. Flashback Before a cell divides it needs to make a copy of its DNA. (Remember Sphase?) How does it do that? 21 DNA has the unique ability to make an exact copy of itself in a process called Replication. 20 22 Chromosome Structure • DNA is packed very tightly in the nucleus. • Human nucleus has ~1 meter of DNA! • Smallest human chromosome has 30 million base pairs. 23 • A chromosome has DNA and proteinchromatin. • Tiny sections of DNA are called genes 24 DNA Replication • Before Cell Division, the DNA must be replicated exactly. 25.1 DNA Replication Each strand is used to make a new strand. 25.2 26 • Many enzymes are involved. Complementary Strands 1. Steps: The two parent strands are unwound and unzipped with the help of DNA helicases. Replication Bubble 27 28 Steps: 2. DNA polymerase attaches new nucleotides (base paring) to the parent strands **Each new strand formed is a complement of one of the original, or parent, strands. 29 • This process will continue until the entire molecule has been unzipped and replicated. 30 Each new strand formed is a complement of one of the original, or parent strands. The replication of DNA is called Semi-conservative replication DNA replication website 31 When all of the DNA in the chromosomes of the cell have been copied by replication, there are now two copies of the genetic information that will be passed on to new cells during mitosis or to new generations through the process of meiosis. 32 Review Clip DNA Vocabulary quiz 2 Quiz#2 1. Messenger RNA 2. Transfer RNA 3. Transcription 4. Translation 5. Codon 6. Anti-Codon 7. Promoter 8. Intron 9. Exon 10.Genetic Code 11.Amino Acid 12.Protein 13.Polypeptide 14.Mutation 15.DNA 16.RNA DNA stores the information needed by a ribosome to make a protein. • How does the ribosome get the information? • How does the ribosome read the information? • How does it make the protein? 33 UNIT GOALS 3 – Distinguish between DNA and RNA. – Explain the role of DNA in storing and transmitting cellular information. – Describe the relationships between changes in DNA and potential appearance of new traits including – alterations during replication, insertions, deletions, substitutions, mutagenic factors, radiation, chemicals. – Examine the use of DNA technology in forensics, medicine and agriculture. EQ: How does a protein get made? “PROTEIN SYNTHESIS” 34 DNA contains the code for all of the cell proteins. 35 Flashback: • DNA is located in the Nucleus • Proteins are made on the ribosomes. • DNA makes a copy (send a message) called “mRNA” 36 Two Steps of Protein Synthesis 1. Transcription 2. Translation LOCATIONS Where do the steps take place? 37 1. Transcription: Nucleus Animation • During transcription a “backwards copy” of the DNA is made…the copy is called messenger RNA or mRNA. • The mRNA takes the code to the ribosome. • During transcription the DNA unwinds and RNA nucleotides are paired up with DNA bases. 38 DNA vs. RNA • Double Stranded • AGTC • Deoxyribose • NEVER! 40 • Single Stranded • AGUC • Ribose • YES! 1. Transcription: Nucleus • The section that is copied is called a gene. • The gene contains the code for a protein. “backwards copy” During transcription the DNA opens up and RNA nucleotides are paired up with the DNA bases. 39 2. Translation: • Once the mRNA copy is made, it can go to the ribosome and be used to make a protein (translated) Cytoplasm 41 2. Translation: Cytoplasm • To have the correct translation of the code, mRNA codons must join with the correct anticodon of the tRNA. Ribosome tRNA anticodon mRNA codons The ribosome reads every 3 letters 42 2. Translation: Cytoplasm To have the correct translation of the code, mRNA codons must join with the correct anticodon of the tRNA. tRNA brings the amino acids to the ribosomes tRNA anticodon mRNA codons A codon is a group of 3 nitrogenous bases on an mRNA molecule that carries the code for a specific amino acid. An anticodon is a set of 3 nitrogenous bases on a tRNA molecule that matches a codon on an mRNA molecule. 43 animation • Remember ….Proteins are made out of amino acids. • There are 20 different amino acids. • 3 bases code for each amino acid. 44 mRNA codons The Genetic Code 45 Another version of the Genetic Code In summary: •Messenger RNA (mRNA) carries the message of the genetic code from the DNA in the nucleus to the ribosomes in the cytoplasm. •At the ribosomes, the mRNA sequence is translated into a protein in a process known as translation. Transfer RNA (tRNA) transfers the amino acids in the cytoplasm to the ribosomes. •The amino acids are lined up in the coded sequence to form a specific protein. 46 Review Clip 47 Review link (in Spanish, but GREAT animation) Animation “in real time” “Stated Clearly” Review of Protein Synthesis Eukaryotic DNA processing Sometimes the DNA is cut up before it leaves the nucleus. Exon - RNA sequences in the primary transcript that are found in the mRNA Intron - RNA sequences between exons that are removed by splicing 48 EOCT Questions Which of the following shows how information is transformed to make a protein? A B C D DNA→RNA→protein gene→chromosome→protein cell respiration→ATP→protein ATP→amino acid→protein 49 Information on mRNA is used to make a sequence of amino acids into a protein by which of the following processes? A replication B translation C transcription D transference 50.1 A characteristic of RNA is that it A remains in the chromosomes in the nucleus B is involved in translating information in DNA into proteins C undergoes crossing-over during meiosis D is replicated during the process of mitosis 50.2 51 Which of the following is the correct basepairing rule for DNA? A A-U; C-G B A-G; T-C C A-T; G-C D A-C; T-G 52 Mutations Describe the relationships between changes in DNA and appearance of new traits Mutations: Youtube 53 Mutations • Every so often genes do change. • A sudden change in the genetic code is called a mutation. • Most mutations have little or no effect on the organism. • Mutations can be spontaneous or may be caused by environmental factors called mutagens. 54 Mutations in DNA usually occur through one of two processes: 1- DNA damage from environmental agents such as : • • • • UV light Radiation Free radicals Chemicals (ex: substances in tobacco products) 55 2- Errors that occur when a cell replicates its DNA in preparation for cell division. • Spontaneous • An enzyme may “fix” the wrong base. Types of Mutations 1.Base pair substitutions • (Aka Point mutation) 2.Frameshift mutation • deletions or insertions CLIP 56 Point mutation Base pair substitutions The substitution of one amino acid for another during protein synthesis. Can be harmless or it change the entire protein. 57 Point mutation Base pair substitutions The inherited disorder sickle-cell anemia is caused by a this type of mutation. 58 59 Frameshift mutations -deletions or insertions • When one or more base pairs are inserted into a DNA molecule or deleted from it. • Causes a reading frame shift during translation. ACTIVITY CLIP DNA TECHNOLOGY genetic recombination. 60 Forensics There are many uses for DNA technology. Police labs use DNA technology to identify people through a process known as DNA fingerprinting. 61 62 How to make a DNA fingerprint • Scientist cut up DNA into pieces using enzymesRestriction Enzymes • Then load the pieces into a well. • Electricity is run through the gel. • The pieces of DNA move to the other end of the gel with the + charge. • Smaller pieces move farther. • The gel is then compared to a known sample 63 Who doesn’t belong? 64 Who done it? • A blood stain was found at a crime scene. Who is the perpetrator of the crime? 65 •Researchers use recombinant DNA technology to analyze genetic changes. •They cut, splice together, & insert the modified DNA molecules from different species into bacteria or another type of cell that rapidly replicates and divides. •The cells copy the foreign DNA right along with their own DNA. •An example of this is the gene for 66 human insulin inserted into a bacterium. This is how human insulin is mass produced. CLIP Click on Picture Restriction Enzyme animation Cloning a Gene 67 Bacteria DNA that has DNA from another organism spliced in to it. •Sheep are used in the 68.1 production of alpha-1 antitrypsin, which is used in the treatment of emphysema. •Goats are also producing the CFTR protein used in the treatment of cystic fibrosis. Called Transgenic Organisms 68.2 In the plant world, the buds of cotton plants are vulnerable to worm attacks. The buds of a modified cotton plant resist these worms, resulting in increased cotton production. These gene insertions are ecologically safer than pesticides. They affect only the targeted pest. 68.3 Plant biologists have used DNA technology to produce plants with many desirable traits. These include increased disease resistance, herbicide resistance, and increased nutritional content. 71 Golden Rice 23 times more Vitamin A Called a Transgenic Organism Transgenic Organisms Transgenic Tobacco, from 1986. This is an ordinary photographic image of a tobacco plant engineered to express a firefly gene which produces luciferase. 72 Clip Scientists today have developed genetically altered bacteria. Among them are strains of bacteria that eat up oil spills manufacture alcohol and other chemicals process minerals. Make human proteins. There is concern about possible risks to the environment and the general population as genetically engineered bacteria are introduced. 73 Cloning Bill Nye 60