CH11 Cell Communication VOCABULARY directions: mark each term to indicate if you know it, are unsure, or don’t. amplify communication deleterious elaborate embryology evolution fluid mosaic model mechanism phosphorylation prophylactic regulation response signaling signal molecule specify second messengers QUESTIONS signal transduction quorum sensing IP3 G protein generate a list to be answered today Who What Where When Which How Why communication You know it is important. What does it mean? Brainstorm words related to “communication”. Where on the cell does the “communication” occur? • “speaking” occurs through the production and release of LIGANDS hormones or other chemical messengers using the cells machinery, vesicles, and exocytosis. • “Listening” occurs by receptor proteins embedded in the cell membrane and by way of signal transduction pathways (domino effect of sorts) . • “Reacting” occurs when specific enzymes become activated (because of the signal transduction pathway) and the cell performs a specific function. How do cells communicate? They are a lot like you… they use many different methods for communicating and their “messages” can result in a variety of responses. Process info via SIGNAL TRANSDUCTION PATHWAY COMMUNICATION Talking, listening, & responding. Generate information & transmit information Receive Information Respond to information signal transduction pathway Inhibitory or excitatory Cells communicate by generating, transmitting and receiving chemical signals. Big Idea 3: Living systems store, retrieve, transmit and respond to information essential to life processes. Big Idea 1: The process of evolution drives the diversity and unity of life. The expression of genetic material controls cell products, and these products determine the metabolism and nature of the cell. 1) Gene expression is regulated by both – 1)environmental signals and – 2)developmental cascades or stages. 2) Cell signaling mechanisms can also modulate and control gene expression. 3) Structure and Function in biology involve two interacting aspects: – 1) the presence of necessary genetic information and – 2) the correct and timely expression of this information. Cell communication processes share common features that reflect a shared evolutionary history. • Communication involves transduction of stimulatory or inhibitory signals from other cells, organisms or the environment. • Correct and appropriate signal transduction processes are generally under strong selective pressure. • In single-celled organisms, signal transduction pathways influence how the cell responds to its environment. Examples: – Use of chemical messengers by microbes to communicate with other nearby cells and to regulate specific pathways in response to population density (quorum sensing) – Use of pheromones to trigger reproduction and developmental pathways – Response to external signals by bacteria that influences cell movement Figure 11.3 Communication among bacteria QUORUM SENSING- bacteria Can sense changes in density And act appropriately. 1 Individual rod-shaped cells 2 Aggregation in progress 0.5 mm 3 Spore-forming structure (fruiting body) 2.5 mm Fruiting bodies Figure 11.3a 1 Individual rod-shaped cells Figure 11.3b 2 Aggregation in progress Figure 11.3c 0.5 mm 3 Spore-forming structure (fruiting body) Figure 11.3d 2.5 mm Fruiting bodies A variety of intercellular and intracellular signal transmissions mediate gene expression. a. Signal transmission within and between cells mediates gene expression. b. EXAMPLES: • Cytokines regulate gene expression to allow for cell replication and division. YEAST • Mating pheromones trigger mating gene expression in yeast. BACTERIA • Levels of cAMP regulate metabolic gene expression in bacteria. PLANTS • Ethylene (hormone) levels cause changes in the production of different enzymes, allowing fruits to ripen. • Gibberellin (hormone) causes seed germination. ANIMALS • Expression of the SRY gene triggers the male sexual development pathway in animals. • Signals come from cells or changes in their physical environment: – Chemicals (pheromones, hormones) – Light electromagnetic radiation, touch, gravity • Receptors are proteins embedded in the cell membrane. • Signal transduction pathways relay signals from receptors to cellular responses. • Responses include: specific enzyme activation – Inhibitory response (via inhibitors) – Excitatory response (via activators- coenzyme or cofactor) Why do cells need to communicate? • (unicellular) To be able to survive and reproduce – Find food and water – Escape/avoid danger – Find mates • (multicellular) To develop from a fertilized egg. – Differentiation – Programmed cell death (Apoptosis) Figure 11.22 Effect of apoptosis during paw development in the mouse. Interdigital tissue Cells undergoing apoptosis Space between 1 mm digits Ex.Morphogens stimulate cell differentiation and development. Figure 11.20 Apoptosis of a human white blood cell. 2 m Once it engulfs bacteria it commits “cell suicide” by carefully packaging its contents into multiple vesicles (membrane bound bags). Figure 11.1 How does cell signaling trigger the desperate flight of this gazelle? Have you ever been scared? What does your body do? • The “fight or flight” response is signaled by the hormone epinepherine or adrenaline. • Causes changes to maximize ATP production – the release of glucose from muscles and liver cells – Increase in respiration depth and rate – Increase in heart rate Figure 11.16 Reception Binding of epinephrine to G protein-coupled receptor (1 molecule) Transduction Inactive G protein Active G protein (102 molecules) Inactive adenylyl cyclase Active adenylyl cyclase (102) ATP Cyclic AMP (104) Inactive protein kinase A Active protein kinase A (104) Inactive phosphorylase kinase Active phosphorylase kinase (105) Inactive glycogen phosphorylase Active glycogen phosphorylase (106) Response Glycogen Glucose 1-phosphate (108 molecules) Cytoplasmic response to a signal: the stimulation of glycogen breakdown by epinephrine. How is communication different btwn single and multicellular organisms? • In single-celled organisms, signal transduction pathways influence how the cell responds to its environment. whereas • In multicellular organisms, signal transduction pathways coordinate the activities within individual cells that support the function of the organism as a whole. – Temperature determination of sex in some vertebrate organisms – DNA repair mechanisms – Epinephrine stimulation of glycogen breakdown in mammals How is communication different in multicellular organisms? • In multicellular organisms, cell-to-cell and environment-tocell chemical signaling pathways direct complex processes. – Ex. cell and organ differentiation to whole organism physiological responses and behaviors. • Certain signal pathways involve direct cell-to-cell contact, operate over very short distances, and may be determined by the structure of the organism or organelle, including – plasmodesmata in plants and – receptor-to-recognition protein interaction in the vertebrate immune system. Figure 11.4 Plasma membranes Gap junctions between animal cells Plasmodesmata between plant cells (a) Cell junctions (b) Cell-cell recognition Communication by direct contact between cells. Which life forms use cell communication? • Cell-to-cell communication is ubiquitous in biological systems, from archaea and bacteria to multicellular organisms. • The basic chemical processes by which cells communicate are shared across evolutionary lines of descent, and communication schemes are the products of evolution. • For cells to function in a biological system, they must communicate with other cells and respond to their external environment. When did cell communication evolve? • Cell-to-cell communication is a component of higher-order biological organization and responses. • Communication evolved billions of years ago among the most ancient bacteria. OVERVIEW: 1) Cell communication evolved early in the history oflife. • Cell-to-cell communication is essential for multicellular organisms. The trillions of cells in a human or an oak tree must communicate in order to develop from a fertilized egg. • Additional evidence for the evolutionary relatedness of all life comes from discovering some universal mechanisms of cellular regulation. – Q: What molecular evidence suggests the unity of life on Earth (descent from a common ancestor)? • Knowledge of cell signaling mechanisms are answering questions in medicine and biology in these areas: embryological development, hormone action, cancer. – Ex. Changes in p53 activity can result in cancer. • Examples of signals that can be received by cells and the possible responses: – Changes in light duration lead to changes in plants (dropping leaves, flowering) – Light & phototropism (plant cell growth toward light) – Gravity or touch effects plant growth (shoots away from gravity, roots toward gravity) b. Signal transmission within and between cells mediates cell function. • Main topic of cell “conversation” = SEX… • Ex. YEAST Saccharomyces cerevisiae • Mating pheromones in yeast trigger mating genes expression and sexual reproduction. • Q: How is the mating signal at the yeast cell surface “transduced”, or changed, into a form that brings about the cellular response of mating? • A: Signal Transduction Pathway Figure 11.2 factor Receptor 2 mating types 1 Exchange of mating factors Each secretes A mating factor That binds to the other Cell. a a factor Yeast cell, Yeast cell, mating type a mating type 2 Mating a 3 New a/ cell a/ Communication between mating yeast cells. • Scientists think signaling mechanisms evolved first in ancient prokaryotes and single celled eukaryotes and were then adopted for new uses by their multicellular descendants. Figure 11.5 Local and long-distance cell signaling by secreted molecules in animals. 2) Communicating cells can be close together or far apart. Local signaling Long-distance signaling Target cell Secreting cell Local regulator diffuses through extracellular fluid. (a) Paracrine signaling Electrical signal along nerve cell triggers release of neurotransmitter. Endocrine cell Neurotransmitter diffuses across synapse. Secretory vesicle Target cell is stimulated. Blood vessel Hormone travels in bloodstream. Target cell specifically binds hormone. (b) Synaptic signaling (c) Endocrine (hormonal) signaling Local signaling: paracrine or synaptic involves…secreting molecules short distances. Ex. neurotransmitters. Long distance (hormonal) signaling… secretes hormones for signaling at greater distances. Known as ENDOCRINE signaling. Figure 11.6-3 3) The 3 stages of cell signaling: EXTRACELLULAR FLUID 1 Reception CYTOPLASM Plasma membrane 2 Transduction 3 Response Receptor Activation of cellular response Relay molecules in a signal transduction pathway Signaling molecule #1 reception: ligand binding to receptor #2 transduction: relay molecules employed #3 response: activation of cellular response THE DETAILS: RECEPTION & THE INITIATION OF TRANSDUCTION Signal transduction pathways link signal reception with cellular response. • 1) Signaling begins with the recognition of a chemical messenger, a ligand, by a receptor protein. • Different receptors recognize different chemical messengers, which can be – peptides, – small chemicals or – proteins, in a specific one-to-one relationship. • 2) A receptor protein recognizes signal molecules, causing the receptor protein’s shape to change, • which initiates transduction of the signal. • Examples: – G-protein linked receptors – Receptor tyrosine kinases – Ligand-gated ion channels – The Exception: Non-membrane protein receptors Figure 11.7a G-protein linked receptor Signaling molecule binding site Segment that interacts with G proteins G protein-coupled receptor Figure 11.7b G-protein linked receptors G protein-coupled receptor Plasma membrane Activated receptor 1 Inactive enzyme GTP GDP GDP CYTOPLASM Signaling molecule Enzyme G protein (inactive) 2 GDP GTP Activated enzyme GTP GDP Pi 3 Cellular response 4 Explain in in your own words what is happening during steps 1-4. Figure 11.7c RECEPTOR TYROSINE KINASES Signaling molecule (ligand) Explain steps 1-4 in your own words. Ligand-binding site helix in the membrane Signaling molecule Tyrosines CYTOPLASM Tyr Tyr Tyr Tyr Tyr Tyr Receptor tyrosine kinase proteins (inactive monomers) 1 Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Dimer 2 Activated relay proteins 3 Tyr Tyr P Tyr Tyr P P Tyr Tyr P Tyr Tyr P Tyr Tyr P P Tyr Tyr P Tyr Tyr P Tyr Tyr P P Tyr Tyr P 6 ATP Activated tyrosine kinase regions (unphosphorylated dimer) 6 ADP Fully activated receptor tyrosine kinase (phosphorylated dimer) 4 Inactive relay proteins Cellular response 1 Cellular response 2 Figure 11.7d LIGAND GATED ION CHANNELS Explain steps 1-3 in your own words. 1 3 2 Signaling molecule (ligand) Gate closed Ions Gate closed Gate open Plasma Ligand-gated membrane ion channel receptor Cellular response ex. Muscle Cell contractions. Cellular response Figure 11.9-1 Hormone (testosterone) The exceptions: Non membrane protein Receptors EXTRACELLULAR FLUID Plasma membrane Receptor protein Are found in the cytoplasm. are activated by Steroid hormones. Activate transcription Factors in the nucleus. DNA NUCLEUS CYTOPLASM Figure 11.9-2 The exceptions: Non membrane protein Receptors Hormone (testosterone) EXTRACELLULAR FLUID Plasma membrane Receptor protein Hormonereceptor complex Are found in the cytoplasm. are activated by Steroid hormones. Activate transcription Factors in the nucleus. DNA NUCLEUS CYTOPLASM Why is is that steroid Hormones can pass Through the cell membrane? Figure 11.9-3 Hormone (testosterone) The exceptions: Non membrane protein Receptors EXTRACELLULAR FLUID Plasma membrane Receptor protein Hormonereceptor complex Are found in the cytoplasm. are activated by Steroid hormones. Activate transcription Factors in the nucleus. DNA NUCLEUS CYTOPLASM And nuclear envelope? Figure 11.9-4 Hormone (testosterone) The exceptions: Non membrane protein Receptors EXTRACELLULAR FLUID Plasma membrane Receptor protein Hormonereceptor complex Are found in the cytoplasm. are activated by Steroid hormones. DNA mRNA Activate transcription Factors in the nucleus. NUCLEUS CYTOPLASM Steroids are lipids. Like dissolves like. Are not repelled by the Hydrophobic tails of the Phospholipid bilayer. Figure 11.9-5 Hormone (testosterone) The exceptions: Non membrane protein Receptors EXTRACELLULAR FLUID Plasma membrane Receptor protein Hormonereceptor complex Are found in the cytoplasm. are activated by Steroid hormones. DNA mRNA Activate transcription Factors in the nucleus. NUCLEUS CYTOPLASM New protein SIGNAL TRANSDUCTION PATHWAYS • 1) Signal transduction is the process by which a signal is converted to a cellular response. CELLULAR RESPONSES TO SIGNALS 1) In response to a signal, a cell may regulate activities in the cytoplasm or transcription in the nucleus. 2) Elaborate pathways amplify and specify the cells response to signals. • Signaling cascades relay signals from receptors to cell targets, often amplifying the incoming signals, with the result of appropriate responses by the cell. • Second messengers are often essential to the function of the cascade. • Examples of second messengers: – Cyclic AMP cAMP – inositol triphosphate IP3 Figure 11.11 Adenylyl cyclase Phosphodiesterase H2O Pyrophosphate P Pi ATP cAMP Why is the molecule called “cyclic” AMP not just AMP? AMP Figure 11.12 First messenger (signaling molecule such as epinephrine) 1st messenger? 2nd messenger? G protein-coupled receptor Adenylyl cyclase G protein GTP ATP cAMP Second messenger Protein kinase A Cellular responses Figure 11.14-1 EXTRACELLULAR FLUID Signaling molecule (first messenger) G protein DAG GTP G protein-coupled receptor Phospholipase C PIP2 IP3 (second messenger) IP3-gated calcium channel What is the 1st messenger? What is the 2nd messenger? Endoplasmic reticulum (ER) CYTOSOL Ca2 Figure 11.14-2 EXTRACELLULAR FLUID Signaling molecule (first messenger) G protein DAG GTP G protein-coupled receptor Phospholipase C PIP2 IP3 (second messenger) IP3-gated calcium channel Endoplasmic reticulum (ER) CYTOSOL Ca2 Ca2 (second messenger) What is the “other” 2nd messenger? Figure 11.14-3 EXTRACELLULAR FLUID Signaling molecule (first messenger) G protein DAG GTP G protein-coupled receptor Phospholipase C PIP2 IP3 (second messenger) IP3-gated calcium channel Endoplasmic reticulum (ER) CYTOSOL Various proteins activated Ca2 Ca2 (second messenger) Cellular responses = Amplified response 3) Major mechanisms of signal transduction pathways: • Protein modifications (Methylation) – Epigenetic control of the genome changes the signaling process. • Phosphorylation cascades in which a series of protein kinases add a phosphate group to the next protein in the cascade sequence 4) Certain small molecules and ions are key components of signaling pathways. Figure 11.15 Growth factor Reception Receptor Phosphorylation cascade Transduction CYTOPLASM Inactive transcription factor Active transcription factor P Response DNA Gene NUCLEUS mRNA Figure 11.10 Signaling molecule Receptor Activated relay molecule Inactive protein kinase 1 Active protein kinase 1 Inactive protein kinase 2 ATP ADP P Active protein kinase 2 PP Pi Inactive protein kinase 3 ATP ADP Pi Active protein kinase 3 PP Inactive protein P ATP P ADP PP Pi Active protein Cellular response Figure 11.17 RESULTS formin Fus3 Wild type (with shmoos) CONCLUSION 1 Mating factor activates receptor. Mating factor G protein-coupled Shmoo projection forming receptor Formin P Fus3 GDP GTP 2 G protein binds GTP and becomes activated. Fus3 Actin subunit P Phosphorylation cascade Fus3 Formin Formin P 4 Fus3 phosphorylates formin, activating it. P 3 Phosphorylation cascade activates Fus3, which moves to plasma membrane. Microfilament 5 Formin initiates growth of microfilaments that form the shmoo projections. Figure 11.18 Signaling molecule Receptor Relay molecules Response 1 Cell A. Pathway leads to a single response. Activation or inhibition Response 2 Response 3 Cell B. Pathway branches, leading to two responses. Response 4 Cell C. Cross-talk occurs between two pathways. Response 5 Cell D. Different receptor leads to a different response. Changes in signal transduction pathways can alter cellular response. • 1) Conditions where signal transduction is blocked or defective can be deleterious, preventative, or prophylactic. • Diseases: Diabetes, heart disease, neurological disease, autoimmune disease, cancer, cholera Ex. Carcinogens can mutate the P53 (tumor supressor gene). The gene normally codes for a protein that controls the cell cycle. • Effects of: Effects of neurotoxins, poisons, pesticides Ex. Neurotoxin BOTOX blocks the neurotransmitter acetyl choline from binding to muscle cells so it induces paralysis. • Drugs: Hypertensives, Anesthetics, Antihistamines and Birth Control Drugs QUIZ Signal Overview Indicate where each of the labels should appear in the figure. • • • • Receptor Relay molecules Transduction Activation of cellular response • Signaling molecule • Response • Reception Figure 11.6-3 3) The 3 stages of cell signaling: EXTRACELLULAR FLUID 1 Reception CYTOPLASM Plasma membrane 2 Transduction 3 Response Receptor Activation of cellular response Relay molecules in a signal transduction pathway Signaling molecule #1 reception #2 transduction #3 response Which of the following best describes a signal transduction pathway? A) binding of a signal molecule to a cell protein B) catalysis mediated by an enzyme C) sequence of changes in a series of molecules resulting in a response D) binding of a ligand on one side of a membrane that results in a change on the other side E) the cell’s detection of a chemical or mechanical stimulus Which of the following best describes a signal transduction pathway? A) binding of a signal molecule to a cell protein B) catalysis mediated by an enzyme C) sequence of changes in a series of molecules resulting in a response D) binding of a ligand on one side of a membrane that results in a change on the other side E) the cell’s detection of a chemical or mechanical stimulus A steroid hormone binds to an intracellular receptor. When it does, the resulting complex is able to do which of the following? Why? A. open channels in the membrane for other substances to enter B. open channels in the nuclear envelope for cytoplasmic molecules to enter C. mediate the transfer of phosphate groups to/from ATP D. act as a transcription factor in the nucleus E. make water-soluble molecules able to diffuse across membranes A steroid hormone binds to an intracellular receptor. When it does, the resulting complex is able to do which of the following? Why? A. open channels in the membrane for other substances to enter B. open channels in the nuclear envelope for cytoplasmic molecules to enter C. mediate the transfer of phosphate groups to/from ATP D. act as a transcription factor in the nucleus E. make water-soluble molecules able to diffuse across membranes Without consulting the figure in your text, describe what is happening at each of the stages labeled 2 through 5. In reactions mediated by protein kinases, what does phosphorylation of successive proteins do to drive the reaction? A. B. C. D. E. make functional ATP change a protein from its inactive to its active form change a protein from its active to its inactive form alter the permeability of the cell’s membranes produce an increase in the cell’s store of inorganic phosphates In reactions mediated by protein kinases, what does phosphorylation of successive proteins do to drive the reaction? A. B. C. D. E. make functional ATP change a protein from its inactive to its active form change a protein from its active to its inactive form alter the permeability of the cell’s membranes produce an increase in the cell’s store of inorganic phosphates What would happen to a cell whose receptors remain bound to the signal molecule(s)? Which of the following is an example of signal amplification? A) catalysis of many cAMP molecules by several simultaneously binding signal molecules B) activation of 100 molecules by a single signal binding event C) activation of a specific gene by a growth factor D) activation of an enzyme molecule E) utilization of a second messenger system Which of the following is an example of signal amplification? A) catalysis of many cAMP molecules by several simultaneously binding signal molecules B) activation of 100 molecules by a single signal binding event C) activation of a specific gene by a growth factor D) activation of an enzyme molecule E) utilization of a second messenger system How could cancer result from a defect in apoptosis? One of the important outcomes of apoptosis is protection of neighboring cells. Which of the following is responsible? A. B. C. D. E. cell shrinkage and blebbing destruction of the cell’s DNA formation of numerous vesicles to be digested action of tyrosine kinases activation of specific proteins One of the important outcomes of apoptosis is protection of neighboring cells. Which of the following is responsible? A. B. C. D. E. cell shrinkage and blebbing destruction of the cell’s DNA formation of numerous vesicles to be digested action of tyrosine kinases activation of specific proteins What are the similarities among the following? • G protein-coupled receptors • receptor tyrosine kinases • ion channel receptors